Sed0025146 (gene) Chayote v1

Overview
NameSed0025146
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG05: 28225546 .. 28228213 (-)
RNA-Seq ExpressionSed0025146
SyntenySed0025146
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACAGAGTTGGCCAGTCACAGGGAGGCGATTCATCAATCAAAACCGACCAATTAGAAGGGCAATTTAGCAAAGATAACGTTCCTACTGCATTTGTAAATCATGGTAAGTTTTCATTGCTGCTATGATCTTTCTGACCTCACTTGATTACCTTGTTACCATAACATGAAAGCCCAGAGCTAAGGCTCAAACTTCTTTTTCTTAAATGTAGTCTCAATTCATATCTATGTTGAGGCAAAATAACCATGAATACAAACCACGAATACGAGTTACAACCACCATGAATTGGCCTTCTAGGGTTTATTAAGGATTGTGAAAGTAATAAAATATTAATCTTATGTACAAGGGCTTGGTCATCTGCTTTGGGACTACAAGACGTTACCGCAGTTTTTTTTATATCCATGCACTAGGTTATTTGAAGTGCATGAAAATTGATAGTTGAATATTATGTATGTTTTTTATATTATTTTTGGTTAAAACTTCATTTATATTCATGAAAAGTATTTTTATTGTGTATACACACACATTATATGTATATATATTATATTGTACAAAATAAAAGGGAGAGTAATATTGTCTCCTATATTATAAATGGCAGAAAAGAGGTCTCTTATATAAAGAAAACCTCTACATACAAATAAGGTAGGAAAGTTTAAAATGACATAAATCTCTATAAATCTCCATCATACTAATAACAGAATATTAATTAGATAAATAAGGAAATATTTAATATGGGAATAACCAACACACATATATATAGTCCTTGCCTTTTGGTGAGTCTTAGGTTCCAGAAGGTCATTGCGCTTTAGTTCGTTTTGTACTTTTTAAAATACTGGATAGGTGGCTACCATGGACGGTTGCTATAGTTTGGAATCAATTCTTCAAGGCGACAGGTTTCGTTTTGGTCAGATTGATGATTTATAACGAGGTTATTAGCAAGTTTTTTGGGGTGAGAAACACAAAAAAATCTTTGGAGGGGTGGAGAGTTGTTCGAACAATATTTGAGCACTCATTAGATTCATATTTTTATTTGGACGTTACTTAGCTTTTTTAATTATTTTCTAGGAGTTATATGTTACTAGAATGAAGACCCTTTTCATAAAAAACCCCCTTAGTTGGGTTGTTCTTTTTATATCATTTATGAATTGACTGAGTGTTTCAGGAAGTATTTTGACTCTTATCATAATTCTCTAGCATCATTATTCAATCTTTTATGCATACACAAGTTTACAGTTTAGGGAGTTCCTACGGTCAACGATATTGTTATGTTATTAGGTGGTGGTTTGAGAGTTTAAGTTGTAGGTCTTCTTCTCTGGAATCAAACTAGGCAGCATTGGGTGCAGAACAGAAAGTTCGTCCACAAAAAACAATTGAGTCGAAAACCCAAATTAAAGTAAGTTGGCCACTGTTTTTTTTAATTTTTAAATAACTAAAATGATTGATTTATTTACAAATACATGTGGAAAGTCAGTAATTAGATTCTTGGCAAACCATTTATTCCAGTCCATACTGAACAATTTTTTATATACTCCTGGATACTCTCATTGAGGACTTATAAATTATGTCTCATCTTTAGAAACATTTATGCGATTACTGGAAGATCTTTTATTCAGTACGTTTTATTTGATTTATTTATTATACTTTTTGTCAAAACATTGTTACAAGTTTCCATGACGGGTTTCTTCTCGTCTGGTCAAGATTTCACATCCAAGCCAAGATTTTCAAAACATTGTTGCAAGCTTAAATGTTTGCCTGCTGTAGTTTATACTCTTTAGACCAAGACCGTCTTGCTCGAAGCAGGCTTGTTCGGATAAAATTTCCAAGAATTTTTCCCTTGTTTTTTTTGTTTTCAGAAGTATGTTTAATCTGACAAGTAAATGTTTATGATATTGTTCACATTCTAATCGCCATTTTCTAGAGAGCAAATACACTTGTTTCATTATAGGAAATTAGTCTAAAAGAAGTTCCAACCTAGTCTAGTTTCAAGCATTCACTTCTACTTTATTAGTCTTGATATTATATTTCGATACTCACTTATTATGAGTTAACACAGTAGTCAAGAGGGTCTTAAAAAACCAAAACATTATGAATTGAATCTATGATAACCCCTATCTAGGAATTAATTTTCTACAGATTTTCTTGACTATCAAATATTGCAAGGTCAGATTGTTTATTTTGTGAAAATAATCAAGTGTGTGTAAGTTGACCGGAACAACTAGAGACATAAATAATATATATATAATATAATATTTTGATACTCAACACGTTGATACTATGTGAAACTGAAAGCTTGCTAAAGATGACAAGAAACCAGAAAGATAAATCTGTTATAACATTAGTTTCTCCGAACTGGGAGTGTTCATTATTCTTGAACTTTGTTTGTTGCATTTTTTCAGCACTCATTGTCTCTGCATGCCTAAATCCTTCTGGATTTGCTGTTCGAATGCAACATACGACAGATTGTTGGGAAGTAAGAAGCGATTTTCACAGCCTATACCGCTTGTTGTAAGTGTCCGCTGTATCAAACCGATATGCTTCTTGGCTGATCGATTTTTCTTATTAATCTTGCCTTTTTCTCTACTGTGGCCGATCTAATCTTGTAATCTACAGGAAATGGTTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTGTATGATTGA

mRNA sequence

ATGGAAAACAGAGTTGGCCAGTCACAGGGAGGCGATTCATCAATCAAAACCGACCAATTAGAAGGGCAATTTAGCAAAGATAACGTTCCTACTGCATTTGTAAATCATGGTCTTCTTCTCTGGAATCAAACTAGGCAGCATTGGGTGCAGAACAGAAAGTTCGTCCACAAAAAACAATTGAGTCGAAAACCCAAATTAAACACTCATTGTCTCTGCATGCCTAAATCCTTCTGGATTTGCTGTTCGAATGCAACATACGACAGATTGTTGGGAAGTAAGAAGCGATTTTCACAGCCTATACCGCTTGTTGAAATGGTTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTGTATGATTGA

Coding sequence (CDS)

ATGGAAAACAGAGTTGGCCAGTCACAGGGAGGCGATTCATCAATCAAAACCGACCAATTAGAAGGGCAATTTAGCAAAGATAACGTTCCTACTGCATTTGTAAATCATGGTCTTCTTCTCTGGAATCAAACTAGGCAGCATTGGGTGCAGAACAGAAAGTTCGTCCACAAAAAACAATTGAGTCGAAAACCCAAATTAAACACTCATTGTCTCTGCATGCCTAAATCCTTCTGGATTTGCTGTTCGAATGCAACATACGACAGATTGTTGGGAAGTAAGAAGCGATTTTCACAGCCTATACCGCTTGTTGAAATGGTTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTGTATGATTGA

Protein sequence

MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQLSRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD
Homology
[Close]
BLAST of Sed0025146 vs. NCBI nr
Match: XP_038899953.1 (uncharacterized protein LOC120087116 isoform X2 [Benincasa hispida])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 93/120 (77.50%), Postives = 102/120 (85.00%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QSQGGDSSIKT++L+G  S+ NVPTAFVNHGLLLWNQTRQHWVQNRK  +K+ L
Sbjct: 1   MDNIANQSQGGDSSIKTNRLQGDSSESNVPTAFVNHGLLLWNQTRQHWVQNRKSGNKEHL 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKLNTHCLCMPKSFW+C  NATYD LLGS K F QPIPL EMVDFLVD WEQEGLYD
Sbjct: 61  IREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDAWEQEGLYD 120

[Close]
BLAST of Sed0025146 vs. NCBI nr
Match: XP_038899929.1 (uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_038899938.1 uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_038899946.1 uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 6.8e-46
Identity = 93/124 (75.00%), Postives = 102/124 (82.26%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNH----GLLLWNQTRQHWVQNRKFVH 60
           M+N   QSQGGDSSIKT++L+G  S+ NVPTAFVNH    GLLLWNQTRQHWVQNRK  +
Sbjct: 1   MDNIANQSQGGDSSIKTNRLQGDSSESNVPTAFVNHVLVVGLLLWNQTRQHWVQNRKSGN 60

Query: 61  KKQLSRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQE 120
           K+ L R+PKLNTHCLCMPKSFW+C  NATYD LLGS K F QPIPL EMVDFLVD WEQE
Sbjct: 61  KEHLIREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDAWEQE 120

[Close]
BLAST of Sed0025146 vs. NCBI nr
Match: XP_008454230.1 (PREDICTED: uncharacterized protein LOC103494700 isoform X1 [Cucumis melo] >XP_008454231.1 PREDICTED: uncharacterized protein LOC103494700 isoform X1 [Cucumis melo] >XP_008454232.1 PREDICTED: uncharacterized protein LOC103494700 isoform X1 [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 4.4e-45
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QSQGGDSSI T+Q +G  S+ NVPT FVNHGLLLWNQ RQHWVQNRK  ++KQ+
Sbjct: 1   MDNIANQSQGGDSSINTNQSQGNSSESNVPTPFVNHGLLLWNQNRQHWVQNRKSGNRKQV 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKL+THCLCMPKSFW+C  +ATYD LLG+ K F QPIPL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLHTHCLCMPKSFWLCSWSATYDSLLGNNKPFPQPIPLGEMVDFLVDIWEQEGLYD 120

[Close]
BLAST of Sed0025146 vs. NCBI nr
Match: XP_004152200.1 (uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652972.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652973.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652974.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_031740240.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_031740241.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >KGN52890.1 hypothetical protein Csa_014953 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 9.8e-45
Identity = 87/120 (72.50%), Postives = 100/120 (83.33%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QS GG+SSI T+Q +G  S+ NVPTAFVNHGLLLWNQ RQHWVQNRK  +K+Q+
Sbjct: 1   MDNIANQSSGGNSSINTNQSQGDSSESNVPTAFVNHGLLLWNQNRQHWVQNRKSGNKRQV 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKL+THCLCMPKSFW+C  +ATYD LLGS K F QP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLHTHCLCMPKSFWLCSWSATYDSLLGSNKPFPQPVPLGEMVDFLVDIWEQEGLYD 120

[Close]
BLAST of Sed0025146 vs. NCBI nr
Match: XP_022998269.1 (uncharacterized protein LOC111492957 isoform X1 [Cucurbita maxima])

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 87/120 (72.50%), Postives = 97/120 (80.83%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QS+GGDSS KT+QL+   SK N P AFVNHGLLLWNQ RQ W+QN+K   K+QL
Sbjct: 1   MDNSANQSRGGDSSFKTEQLQEDSSKANAP-AFVNHGLLLWNQNRQQWLQNKKANRKEQL 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKL+THCLCMPKSFW+C  NATYD LLGS K F QPIPL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]
BLAST of Sed0025146 vs. ExPASy TrEMBL
Match: A0A1S3BY48 (uncharacterized protein LOC103494700 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494700 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.1e-45
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QSQGGDSSI T+Q +G  S+ NVPT FVNHGLLLWNQ RQHWVQNRK  ++KQ+
Sbjct: 1   MDNIANQSQGGDSSINTNQSQGNSSESNVPTPFVNHGLLLWNQNRQHWVQNRKSGNRKQV 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKL+THCLCMPKSFW+C  +ATYD LLG+ K F QPIPL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLHTHCLCMPKSFWLCSWSATYDSLLGNNKPFPQPIPLGEMVDFLVDIWEQEGLYD 120

[Close]
BLAST of Sed0025146 vs. ExPASy TrEMBL
Match: A0A0A0KTE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004990 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.8e-45
Identity = 87/120 (72.50%), Postives = 100/120 (83.33%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QS GG+SSI T+Q +G  S+ NVPTAFVNHGLLLWNQ RQHWVQNRK  +K+Q+
Sbjct: 1   MDNIANQSSGGNSSINTNQSQGDSSESNVPTAFVNHGLLLWNQNRQHWVQNRKSGNKRQV 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKL+THCLCMPKSFW+C  +ATYD LLGS K F QP+PL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLHTHCLCMPKSFWLCSWSATYDSLLGSNKPFPQPVPLGEMVDFLVDIWEQEGLYD 120

[Close]
BLAST of Sed0025146 vs. ExPASy TrEMBL
Match: A0A6J1KDW3 (uncharacterized protein LOC111492957 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492957 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.8e-43
Identity = 87/120 (72.50%), Postives = 97/120 (80.83%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QS+GGDSS KT+QL+   SK N P AFVNHGLLLWNQ RQ W+QN+K   K+QL
Sbjct: 1   MDNSANQSRGGDSSFKTEQLQEDSSKANAP-AFVNHGLLLWNQNRQQWLQNKKANRKEQL 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKL+THCLCMPKSFW+C  NATYD LLGS K F QPIPL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]
BLAST of Sed0025146 vs. ExPASy TrEMBL
Match: A0A6J1G9Y2 (uncharacterized protein LOC111452284 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452284 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.8e-42
Identity = 86/120 (71.67%), Postives = 96/120 (80.00%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QS+GGDSS KT+QL+   SK N P AFVNHGLLLWNQ RQ W+ N+K   K+QL
Sbjct: 1   MDNSANQSRGGDSSFKTEQLQEDSSKANTP-AFVNHGLLLWNQNRQQWLLNKKANRKEQL 60

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+PKL+THCLCMPKSFW+C  NATYD LLGS K F QPIPL EMVDFLVDIWEQEGLYD
Sbjct: 61  IREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLYD 119

[Close]
BLAST of Sed0025146 vs. ExPASy TrEMBL
Match: A0A6J1DHY8 (uncharacterized protein LOC111021080 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021080 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.4e-42
Identity = 83/121 (68.60%), Postives = 99/121 (81.82%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSI-KTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQ 60
           M+N   +SQG +SSI KT+Q+ G  S+ NV TAFVN+GLLLWNQTRQHWV+N+K  +++ 
Sbjct: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60

Query: 61  LSRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLY 120
             R+PKLNTHCLCMPKSFW+C  NATYD LLGS K F QP+PL EMVDFLVD+WEQEGLY
Sbjct: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120

[Close]
BLAST of Sed0025146 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 61/120 (50.83%), Postives = 71/120 (59.17%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QSQ   SSI         +  + PT FVNHGL LWNQTRQ W+ N     KK  
Sbjct: 65  MDNSTLQSQRSMSSISFTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWLANGT-SQKKAK 124

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+P ++          W    NATY+ LLG  KRFS+PIPL EMVDFLVD+WEQEGLYD
Sbjct: 125 VREPTIS----------W----NATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]
BLAST of Sed0025146 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 61/120 (50.83%), Postives = 71/120 (59.17%), Query Frame = 0 

Query: 1   MENRVGQSQGGDSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQL 60
           M+N   QSQ   SSI         +  + PT FVNHGL LWNQTRQ W+ N     KK  
Sbjct: 65  MDNSTLQSQRSMSSISFTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWLANGT-SQKKAK 124

Query: 61  SRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLYD 120
            R+P ++          W    NATY+ LLG  KRFS+PIPL EMVDFLVD+WEQEGLYD
Sbjct: 125 VREPTIS----------W----NATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]
BLAST of Sed0025146 vs. TAIR 10
Match: AT3G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23
Identity = 56/116 (48.28%), Postives = 70/116 (60.34%), Query Frame = 0 

Query: 8   SQGGDSSIKTDQL----EGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQLSRK 67
           + G  SSI T  L    +G  S  N P  FVNHGL+LWNQTRQ WV +++   +K + R+
Sbjct: 60  AHGSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGRE 119

Query: 68  PKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLY 120
           P LN               N TY+ LLGS KRF +PIPL EMV FLV++WE+EGLY
Sbjct: 120 PILN--------------ENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 161

[Close]
BLAST of Sed0025146 vs. TAIR 10
Match: AT3G15770.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23
Identity = 56/116 (48.28%), Postives = 70/116 (60.34%), Query Frame = 0 

Query: 8   SQGGDSSIKTDQL----EGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQLSRK 67
           + G  SSI T  L    +G  S  N P  FVNHGL+LWNQTRQ WV +++   +K + R+
Sbjct: 59  AHGSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGRE 118

Query: 68  PKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLY 120
           P LN               N TY+ LLGS KRF +PIPL EMV FLV++WE+EGLY
Sbjct: 119 PILN--------------ENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 160

[Close]
BLAST of Sed0025146 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 5.6e-22
Identity = 60/121 (49.59%), Postives = 69/121 (57.02%), Query Frame = 0 

Query: 1   MENRVGQSQGG-DSSIKTDQLEGQFSKDNVPTAFVNHGLLLWNQTRQHWVQNRKFVHKKQ 60
           M+N    SQG   SS +T   +      N P  +VN GLLLWNQTR+ WV   K  +   
Sbjct: 47  MDNITFPSQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVD 106

Query: 61  LSRKPKLNTHCLCMPKSFWICCSNATYDRLLGSKKRFSQPIPLVEMVDFLVDIWEQEGLY 120
            ++  KLN          W   + ATYD LLGS K F QPIPL EMVDFLVDIWEQEGLY
Sbjct: 107 HNQGAKLN----------W---NTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLY 154

The following BLAST results are available for this feature:
BLAST of Sed0025146 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899953.11.2e-4777.50uncharacterized protein LOC120087116 isoform X2 [Benincasa hispida][more]
XP_038899929.16.8e-4675.00uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_03889993... [more]
XP_008454230.14.4e-4573.33PREDICTED: uncharacterized protein LOC103494700 isoform X1 [Cucumis melo] >XP_00... [more]
XP_004152200.19.8e-4572.50uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652972.... [more]
XP_022998269.11.2e-4272.50uncharacterized protein LOC111492957 isoform X1 [Cucurbita maxima][more]
BLAST of Sed0025146 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0025146 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BY482.1e-4573.33uncharacterized protein LOC103494700 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0KTE04.8e-4572.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004990 PE=4 SV=1[more]
A0A6J1KDW35.8e-4372.50uncharacterized protein LOC111492957 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1G9Y23.8e-4271.67uncharacterized protein LOC111452284 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1DHY86.4e-4268.60uncharacterized protein LOC111021080 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of Sed0025146 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25360.11.7e-2350.83unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G25360.21.7e-2350.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15770.12.3e-2348.28unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G15770.22.3e-2348.28unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G15350.25.6e-2249.59unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025124Domain of unknown function DUF4050PFAMPF13259DUF4050coord: 17..64
e-value: 5.4E-7
score: 30.1
coord: 83..120
e-value: 1.0E-11
score: 45.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR33373OS07G0479600 PROTEINcoord: 1..120
NoneNo IPR availablePANTHERPTHR33373:SF15DUF4050 FAMILY PROTEINcoord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025146.1Sed0025146.1mRNA