Sed0025064 (gene) Chayote v1

Overview


Name	Sed0025064
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin M3
Location	LG10: 36816966 .. 36820331 (+)
RNA-Seq Expression	Sed0025064
Synteny	Sed0025064

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGTGTACAAATTCCAATTCCGTTCCGTCGGCTATTCTGTACAAATTCCAAGTTCTCCGTATATATATCATTTGATTTCCGATCTTCTTTACTCTCTCTGCACACTCATCTCTCTCAACAATGGCGTCCTCTCTCTCTTTCTCCGCTCTTCAAACTCCTTCCATTCGCATTTCCCCAAATTCCAACCTCAATTCCCTCCGCTTCTTCTCGCCTCCTTCAAATCTGCGTCTCAATCGCGGTGTTAGGGCTCGAAATGCTTCACTCAGCCTCAACATTCAATCCGTCGCTCAACCGAAAGGTTTTCCCCCTCATCGCTCTGATTCTGTATTTCTCGCTTTATGTTTTGTGCTGAATTGTAGGTTTTACTGCGTTCTTGATGAGATCTTGATTGCTGCGATGTTTTTGTTTGATACATGCGATCTGTTGTTATATGTCAGTGGAGTTTGATTGATTTAATGACTGTGCTACTTGGAGATTGGCTTTGATTGCGTTGTAGATTGTTTCCATTTCAATCTCTGAGTCTCATTAGATGCTTTGCATTTTCCTTAACTTATGCTTCGTTTAGTAATGTTTTGTGTTGCTTAGTTTTGGTACGTTTCTCTCATTTTCTGCTGAGTTTTAGGATTTTTTGTAGGTTTTACTGCGTTCTTGACGAGATCTTGATTGATGCGATGTTTTTGTTTTGGATTTGGTTTAATTAATGCGATCTGTTATATGTCGGTGGAGTTTAATTGATTTAATGGCTGTGCTACTTGGAGATTGGCTTTGATTGCGTTGTAGATTATTGCCATTTCAATCTCTGAGTCTCATTAGATGTTTTACACTTTCCTTAACTTATGCTTCGTTTAGTAATGTTTTGTGTTGTTTAGTTTTGGTACGTTTCTCTCATTTTCTGCTGAATTTTGGGATTTATTTTAGGTTTTACTGCGTTCTTGTTTGTTGATTGTTGCGATGTTCTTGTTTTGAATGCGATCTGTTATGTCGGTGGAGTTTAATTGATTTAATGACTGAGCTACTATTAGACTGGCTTTGATTGCATAGTAGATGATTTCCTATTCAATCTCTGATTCTCATCGGATGTTTTACATTTTCATTAACTTATGGTTCATTTATTAATACGAGATCCAATATTCCAATCTGAAAACAAGTTATGGATTTGAATCTTCTCACTCTCGATTGTAGTTGAATAAAAAAAAGTAAACACTATTATGTTAAATCATCATTTAACCGTCATGGAGTGATCTAGTAAAGAGTCCATAAGTAACTAAGAGGGTGATGGTTCAATCTTTGATAGTCATCTACCTAGTAAATAATTTACTATGGATTTCTTTGACATTCAAATGTTGTAGGGTAGTCTGTAACTTGTCTGACCCTCACATATTCTTTTTTAAAAATATATTCCAAGCTCAAATTTTCCGTTTGAAGGAATGCTGGAATGTCGCAAATAGATGAAAAAAAAAATCAAGATCTGTTCAATGTATGGTACAATTTGCGTTATTCGTGGTAGTATCATTTATCTGTGTTGTATATATATATATATGTTATATAGTCATAGGAAAAGATTTGGCCGGCTCCGTATTTGTAACAATATTTAAACGTTTTGTAGTCTATTTTTGACTTGGTATGTAATATATTTTTATACCCCTTTTTTTAATAGAGAAAATCCGAAATTGTTATTTCTTGGTAATTTCTTTTTTATTAGGGAACTTCTTGGTAACTACAGGATGGGAATGGATTAACTATTGCATTATTAGGGTTCTCAATCATAACCTGCTTGAAAGATTTTAATAGAAACAGGGCATGGACAACCATATTTCTTTTTTTGTTTTTTGGATGAGATGGATAACTATATTTCATTCATAGCAATCTGATGTTCATTTTACTAGCTGGAAACCCATATTTGTTTTTACATAGAACTGCACGTAGATTCATGTTACAACAAATCTTTTTTTCTGCTTCATTTTTCTTAAACGAAACAATTTCATTGATGGTATGAAATTATGGAGATAAACTCCTTACACCTATAGGCGACTACAAAATATCCTTTTACCTGCTTAGTAAACTGCACTTGCATATGATTTGAGTTGAGCTTGTCATTCACGATCACTCTTTTTATCAACTTCCTTTCTTTTTTCTTTTTCATAGTTACTGTATACGTTTTCTGACTTTCTGGATACATCTTGATAGTACATGATTTGTTTTTCTCAGTTTTCATTCCTTGTATTTCTTACCTCGATGTATACACACACACACACACACGGTTTTTGTTATATGTTTCCCATCATTTTACTTTATCACTGAGCATAGACTTATCCAAGTGAACCTTTGTTTTTGGATGATGATTTTTCTAGTGCTATTAGTTCTTCATCTCTTTTCTTGTTGAAAGCTGTATGTTTGCGGTATACTGTTTTTGTTGTCTTGTTTTGGAAAAAACATTTACCATTGGATAGACTTTGATGACAATCTTATGTTTTTGCATATTTGAAAGTCAACCTTTTCCCTTGTGCAATGCCTTCTTTATCCTGTAAATTATTTGTAGGCCTCTAACAATGGTCCAACTTTACTGCATACTATGGAAATTGGTAGTTGATAAAGCATGGTCTCTTATGATTAGTAGATTACATATTAAAAAGTCGTATGCTCATTGGTGTCCAGTGTTTAATTGATACAAATAGTGAACCAATTTGGATGCATATCTCAAGAATGCCTTTCTTAATAAATTTTTGTTGACATACACAGCTGATGTGGTTACTAAAGACTCATGGAACAAAATGATCTTAGAGAGCAGAACCCCTGTCCTAGTTGAATTTTATGCTAGTTGGTGCGGACCATGTAGAATGGTGCATCGAGTCATCGATGAGCTAGCTGCTGATTACGAGGGGAAGCTCAAATGCTTTGTACTCAACACTGACAACGACCTGAAAATCGCCGAAGACTACGATGTCAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGTGAAAGTGTGATTGGTACCATGCCAAAAGATTTCTATATTTCTGCCATTGAAAGGGTTCTCAAGCAGTAGGATGGGGGGAGATGCATGGAAATAAAACCGGATATCTTTTTCGTGTAAGGTTGACCTACTCGATTTTGCAAGTTGACTGGCTATTTTGTTGCCAAAGCTTTTCTTCACTAGGCTACTAGTTCTTGAGCTGTATATAATAAATATAGCTTTAATGCCAGGTTTCTTACTGTAGTTTATCATTTTGCTGTCTTTTTGTTATGAAATTGTGATTAAACTTTGCAGTATTACAAATTCACACTTTACCAAGGCTTTTGGGTGTGATTACTGAACCATTTTCATACTAATAATATTTGCATTTTTAGGTGT

mRNA sequence

GGCGTGTACAAATTCCAATTCCGTTCCGTCGGCTATTCTGTACAAATTCCAAGTTCTCCGTATATATATCATTTGATTTCCGATCTTCTTTACTCTCTCTGCACACTCATCTCTCTCAACAATGGCGTCCTCTCTCTCTTTCTCCGCTCTTCAAACTCCTTCCATTCGCATTTCCCCAAATTCCAACCTCAATTCCCTCCGCTTCTTCTCGCCTCCTTCAAATCTGCGTCTCAATCGCGGTGTTAGGGCTCGAAATGCTTCACTCAGCCTCAACATTCAATCCGTCGCTCAACCGAAAGCTGATGTGGTTACTAAAGACTCATGGAACAAAATGATCTTAGAGAGCAGAACCCCTGTCCTAGTTGAATTTTATGCTAGTTGGTGCGGACCATGTAGAATGGTGCATCGAGTCATCGATGAGCTAGCTGCTGATTACGAGGGGAAGCTCAAATGCTTTGTACTCAACACTGACAACGACCTGAAAATCGCCGAAGACTACGATGTCAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGTGAAAGTGTGATTGGTACCATGCCAAAAGATTTCTATATTTCTGCCATTGAAAGGGTTCTCAAGCAGTAGGATGGGGGGAGATGCATGGAAATAAAACCGGATATCTTTTTCGTGTAAGGTTGACCTACTCGATTTTGCAAGTTGACTGGCTATTTTGTTGCCAAAGCTTTTCTTCACTAGGCTACTAGTTCTTGAGCTGTATATAATAAATATAGCTTTAATGCCAGGTTTCTTACTGTAGTTTATCATTTTGCTGTCTTTTTGTTATGAAATTGTGATTAAACTTTGCAGTATTACAAATTCACACTTTACCAAGGCTTTTGGGTGTGATTACTGAACCATTTTCATACTAATAATATTTGCATTTTTAGGTGT

Coding sequence (CDS)

ATGGCGTCCTCTCTCTCTTTCTCCGCTCTTCAAACTCCTTCCATTCGCATTTCCCCAAATTCCAACCTCAATTCCCTCCGCTTCTTCTCGCCTCCTTCAAATCTGCGTCTCAATCGCGGTGTTAGGGCTCGAAATGCTTCACTCAGCCTCAACATTCAATCCGTCGCTCAACCGAAAGCTGATGTGGTTACTAAAGACTCATGGAACAAAATGATCTTAGAGAGCAGAACCCCTGTCCTAGTTGAATTTTATGCTAGTTGGTGCGGACCATGTAGAATGGTGCATCGAGTCATCGATGAGCTAGCTGCTGATTACGAGGGGAAGCTCAAATGCTTTGTACTCAACACTGACAACGACCTGAAAATCGCCGAAGACTACGATGTCAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGTGAAAGTGTGATTGGTACCATGCCAAAAGATTTCTATATTTCTGCCATTGAAAGGGTTCTCAAGCAGTAG

Protein sequence

MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKADVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ

Homology

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BLAST of Sed0025064 vs. NCBI nr
Match: XP_008454954.1 (PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxin M3 [Cucumis melo var. makuwa] >TYK06754.1 thioredoxin M3 [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 9.9e-72
Identity = 136/165 (82.42%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MA+S+SFS  QT   RISP SNLNSLR FSPPSNLR+NR    RNASL+LNIQ ++QPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           ++AEDY++KAVPVVMLFKNGEKC+SVIGTMPKDFYI+A+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of Sed0025064 vs. NCBI nr
Match: KAG6588665.1 (Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022451.1 Thioredoxin M3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.5 bits (711), Expect = 3.8e-71
Identity = 139/165 (84.24%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MASSL FS  QT   RIS +SNLNSL FFSPPSNLRL+R +RARNASL+LN+Q V+Q KA
Sbjct: 1   MASSLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +IAEDY++KAVPVVMLFKNGEKCESVIGTMPKDFYI+AIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of Sed0025064 vs. NCBI nr
Match: XP_023531830.1 (thioredoxin M3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.5 bits (711), Expect = 3.8e-71
Identity = 139/165 (84.24%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MASSL FS  QT    IS +SNLNSL FFSPPSNLRL+R +RARNASL+LN+Q V+QPKA
Sbjct: 1   MASSLPFSVPQTLPNCISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQPKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +IAEDY++KAVPVVMLFKNGEKCESVIGTMPKDFYI+AIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of Sed0025064 vs. NCBI nr
Match: XP_022988977.1 (thioredoxin M3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 278.5 bits (711), Expect = 3.8e-71
Identity = 139/165 (84.24%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MASSL FS  QT   RIS +SNLNSL FFSPPSNLRL+R +RARNASL+LN+Q V+Q KA
Sbjct: 1   MASSLPFSVHQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +IAEDY++KAVPVVMLFKNGEKCESVIGTMPKDFYI+AIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of Sed0025064 vs. NCBI nr
Match: XP_038887358.1 (thioredoxin M3, chloroplastic [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 6.4e-71
Identity = 135/165 (81.82%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MA+S SFS  QT   RISP+SNLNSLR FSPPS+LRLNR ++ RNASL+LN+Q ++QPKA
Sbjct: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSSLRLNRRLKPRNASLTLNVQCISQPKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTKDSWNKMILES T VLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD D+
Sbjct: 61  EVVTKDSWNKMILESGTTVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDM 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +IAEDY++KAVPVVMLFKNGEKC+SVIGTMPKDFYI+AIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of Sed0025064 vs. ExPASy Swiss-Prot
Match: Q9SEU7 (Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 2.6e-43
Identity = 95/166 (57.23%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 2   ASSLSFSALQTPSIR-ISPNSNLNSLRFFSPPSNLRLN--RGVRARNAS-LSLNIQSVAQ 61
           +SS+ F+  +  + R IS  S L  +  FSP S LR +  R + + +AS L L+   V  
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVTSFSPRS-LRFSDRRSLLSSSASRLRLSPLCVRD 66

Query: 62  PKADVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTD 121
            +A  VT+ SW   +L+S TPVLVEFY SWCGPCRMVHR+IDE+A DY GKL C++LN D
Sbjct: 67  SRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNAD 126

Query: 122 NDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVL 164
           NDL +AE+Y++KAVPVV+LFKNGEK ES++GTMPK+FYISAIERVL
Sbjct: 127 NDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of Sed0025064 vs. ExPASy Swiss-Prot
Match: Q7XQQ2 (Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0430800 PE=2 SV=4)

HSP 1 Score: 132.1 bits (331), Expect = 5.7e-30
Identity = 59/124 (47.58%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 40  GVRARNASLSLNIQSVA-QPK-ADVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRV 99
           G R R A+  +   S A  P+ A  +T  SWN+ ++ S  PVL+EF+ASWCGPCRMVHR+
Sbjct: 45  GCRRRWAAHRIRTVSCAYSPRGAKTITACSWNEYVICSDIPVLIEFWASWCGPCRMVHRI 104

Query: 100 IDELAADYEGKLKCFVLNTDNDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYIS 159
           +DE+A +Y G++KC+ L+TD+  ++A  Y ++ +P V+LFK+GEK  S+ GT+PK  Y+ 
Sbjct: 105 VDEIAQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLFKDGEKTHSITGTLPKAVYVR 164

Query: 160 AIER 162
           AIE+
Sbjct: 165 AIEK 168

[Close]

BLAST of Sed0025064 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 7.0e-28
Identity = 65/167 (38.92%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 3   SSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQ----SVAQP 62
           +S S SA     +R  P S     +     S    NR    R AS+   +Q    S+  P
Sbjct: 17  ASASASASSARRLRAVPPSRGIRYQALRADSGFAGNRRGGGRGASVVCAVQGQDTSIQVP 76

Query: 63  KADVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDN 122
           +   VTK +W  +++ES  PVLV ++A+WCGPC+M+  V+ +L+ +YEGKLKC+ LNTD 
Sbjct: 77  E---VTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDE 136

Query: 123 DLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +  IA  Y V+++P +M+FKNGEK ++VIG +P+   I++IE+ +++
Sbjct: 137 NPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKFVER 180

[Close]

BLAST of Sed0025064 vs. ExPASy Swiss-Prot
Match: P23400 (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TRXM PE=1 SV=3)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-27
Identity = 48/109 (44.04%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 55  VAQPKADVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVL 114
           V + +A  V  D++  ++LES  PVLV+F+A WCGPCR++  V+DE+A +Y+ KLKC  L
Sbjct: 31  VVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKL 90

Query: 115 NTDNDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVL 164
           NTD    +A +Y ++++P +M+FK G+KCE++IG +PK   +  +E+ L
Sbjct: 91  NTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139

[Close]

BLAST of Sed0025064 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.7e-27
Identity = 57/130 (43.85%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 35  LRLNRGVRARNASLSLNIQSVAQP-KADVVTKDSWNKMILESRTPVLVEFYASWCGPCRM 94
           +RL  G RAR  S+    Q      +   VTK +W  +++ES  PVLVEF+ASWCGPC+M
Sbjct: 43  VRLRSG-RARGVSVVCAAQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKM 102

Query: 95  VHRVIDELAADYEGKLKCFVLNTDNDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKD 154
           +  VI +L+ +YEGKL C+ LNTD +  IA  + ++++P +M+FKNGEK ++VIG +P+ 
Sbjct: 103 IDPVIGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPES 162

Query: 155 FYISAIERVL 164
             +S+I++ +
Sbjct: 163 TLVSSIDKYI 171

[Close]

BLAST of Sed0025064 vs. ExPASy TrEMBL
Match: A0A5D3C652 (Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.8e-72
Identity = 136/165 (82.42%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MA+S+SFS  QT   RISP SNLNSLR FSPPSNLR+NR    RNASL+LNIQ ++QPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           ++AEDY++KAVPVVMLFKNGEKC+SVIGTMPKDFYI+A+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of Sed0025064 vs. ExPASy TrEMBL
Match: A0A1S3C0H5 (thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.8e-72
Identity = 136/165 (82.42%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MA+S+SFS  QT   RISP SNLNSLR FSPPSNLR+NR    RNASL+LNIQ ++QPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           ++AEDY++KAVPVVMLFKNGEKC+SVIGTMPKDFYI+A+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of Sed0025064 vs. ExPASy TrEMBL
Match: A0A6J1JEI0 (thioredoxin M3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486177 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71
Identity = 139/165 (84.24%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MASSL FS  QT   RIS +SNLNSL FFSPPSNLRL+R +RARNASL+LN+Q V+Q KA
Sbjct: 1   MASSLPFSVHQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +IAEDY++KAVPVVMLFKNGEKCESVIGTMPKDFYI+AIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of Sed0025064 vs. ExPASy TrEMBL
Match: A0A0A0K2M6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 134/165 (81.21%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MA+S SFS  QT   RISP SNLNSLR FSPPSNL  NR +  RNASL+LNIQ ++QPKA
Sbjct: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTKDSWNKMILES TPVLVEFYASWCGPCRMVHRVIDE+AA+Y+GKLKCFVLNTD DL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +IAEDY++KAVPVVMLFKNGEKC+SVIGTMPKDFYI+A+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of Sed0025064 vs. ExPASy TrEMBL
Match: A0A6J1EMB5 (thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 138/165 (83.64%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MASSLSFSALQTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVAQPKA 60
           MAS L FS  QT   RIS +SNLNSL FFSPPSNLRL+R +RARNASL+LN+Q V+Q KA
Sbjct: 23  MASYLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 82

Query: 61  DVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDL 120
           +VVTK+SWNKMILES  PVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTD DL
Sbjct: 83  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 142

Query: 121 KIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVLKQ 166
           +IAEDY++KAVPVVMLFKNGEKCESVIGTMPKDFYI+AIERVLKQ
Sbjct: 143 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 187

[Close]

BLAST of Sed0025064 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44
Identity = 95/166 (57.23%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 2   ASSLSFSALQTPSIR-ISPNSNLNSLRFFSPPSNLRLN--RGVRARNAS-LSLNIQSVAQ 61
           +SS+ F+  +  + R IS  S L  +  FSP S LR +  R + + +AS L L+   V  
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVTSFSPRS-LRFSDRRSLLSSSASRLRLSPLCVRD 66

Query: 62  PKADVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTD 121
            +A  VT+ SW   +L+S TPVLVEFY SWCGPCRMVHR+IDE+A DY GKL C++LN D
Sbjct: 67  SRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNAD 126

Query: 122 NDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVL 164
           NDL +AE+Y++KAVPVV+LFKNGEK ES++GTMPK+FYISAIERVL
Sbjct: 127 NDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of Sed0025064 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.7e-43
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 2   ASSLSFSALQTPSIR-ISPNSNLNSLRFFSPPSNLRLN--RGVRARNAS-LSLNIQSVAQ 61
           +SS+ F+  +  + R IS  S L  +  FSP S LR +  R + + +AS L L+   V  
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVTSFSPRS-LRFSDRRSLLSSSASRLRLSPLCVRD 66

Query: 62  PKADV-VTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNT 121
            +A   VT+ SW   +L+S TPVLVEFY SWCGPCRMVHR+IDE+A DY GKL C++LN 
Sbjct: 67  SRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNA 126

Query: 122 DNDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVL 164
           DNDL +AE+Y++KAVPVV+LFKNGEK ES++GTMPK+FYISAIERVL
Sbjct: 127 DNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

[Close]

BLAST of Sed0025064 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-26
Identity = 67/175 (38.29%), Postives = 100/175 (57.14%), Query Frame = 0


Query: 1   MASSLSFSALQTPSI---RISPNSNL------NSLRFFSPPSNLRLNRGVR-ARNASLSL 60
           +A+S+S S+   PS+   RISP   L      +S    +  ++L  NR  R AR   ++ 
Sbjct: 18  IAASVS-SSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIAC 77

Query: 61  NIQSVAQPKADV--VTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGK 120
             Q       +V  ++   W   +LES  PVLVEF+A WCGPCRM+H ++D+LA D+ GK
Sbjct: 78  EAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGK 137

Query: 121 LKCFVLNTDNDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVL 164
            K + +NTD     A  Y +++VP V++FK GEK +S+IG +P++     IER L
Sbjct: 138 FKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of Sed0025064 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 57/167 (34.13%), Postives = 95/167 (56.89%), Query Frame = 0


Query: 2   ASSLS----FSAL-QTPSIRISPNSNLNSLRFFSPPSNLRLNRGVRARNASLSLNIQSVA 61
           ASSLS    F+ L ++  +RI  + +  SL     P   RL R V       + +IQ   
Sbjct: 27  ASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQ--- 86

Query: 62  QPKADVVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNT 121
                VV   +W+ ++L++  PV+V+F+A WCGPC+M+  ++++LA  Y GK+K + LNT
Sbjct: 87  -----VVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNT 146

Query: 122 DNDLKIAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVL 164
           D        Y V+++P +M+F  GEK +++IG +PK    S++++ L
Sbjct: 147 DESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Sed0025064 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21
Identity = 57/162 (35.19%), Postives = 89/162 (54.94%), Query Frame = 0


Query: 6   SFSALQTPSIRISPNSNLN---SLRFFSPPSNL-RLNRGVRARNASLSLNIQSVAQPKAD 65
           SFS  Q  S+ +  +S L    SL   S  S + RL RGV       +  I         
Sbjct: 27  SFSTRQMFSV-LPESSGLRTRVSLSSLSKNSRVSRLRRGVICEAQDTATGI--------P 86

Query: 66  VVTKDSWNKMILESRTPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDNDLK 125
           VV   +W+ ++L++  PV V+F+A WCGPC+M+  +++ELA  Y G+ K + LNTD    
Sbjct: 87  VVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPA 146

Query: 126 IAEDYDVKAVPVVMLFKNGEKCESVIGTMPKDFYISAIERVL 164
               Y V+++P +M+F NGEK +++IG + KD   ++I + L
Sbjct: 147 TPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

The following BLAST results are available for this feature:

BLAST of Sed0025064 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454954.1	9.9e-72	82.42	PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxi...	[more]
KAG6588665.1	3.8e-71	84.24	Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_023531830.1	3.8e-71	84.24	thioredoxin M3, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988977.1	3.8e-71	84.24	thioredoxin M3, chloroplastic-like [Cucurbita maxima]	[more]
XP_038887358.1	6.4e-71	81.82	thioredoxin M3, chloroplastic [Benincasa hispida]	[more]

BLAST of Sed0025064 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU7	2.6e-43	57.23	Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2	[more]
Q7XQQ2	5.7e-30	47.58	Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q7X8R5	7.0e-28	38.92	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
P23400	2.0e-27	44.04	Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TRXM P...	[more]
Q6H7E4	2.7e-27	43.85	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0...	[more]

BLAST of Sed0025064 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C652	4.8e-72	82.42	Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 ...	[more]
A0A1S3C0H5	4.8e-72	82.42	thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1	[more]
A0A6J1JEI0	1.8e-71	84.24	thioredoxin M3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486177 P...	[more]
A0A0A0K2M6	9.1e-71	81.21	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610...	[more]
A0A6J1EMB5	9.1e-71	83.64	thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657...	[more]

BLAST of Sed0025064 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15570.1	1.9e-44	57.23	Thioredoxin superfamily protein	[more]
AT2G15570.2	2.7e-43	56.89	Thioredoxin superfamily protein	[more]
AT3G15360.1	1.8e-26	38.29	thioredoxin M-type 4	[more]
AT4G03520.1	1.5e-22	34.13	Thioredoxin superfamily protein	[more]
AT1G03680.1	3.8e-21	35.19	thioredoxin M-type 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 127..138 score: 31.02 coord: 79..87 score: 61.79 coord: 87..96 score: 49.78
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 61..165 e-value: 6.0E-28 score: 98.9
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 27..165
None	No IPR available	PANTHER	PTHR45663:SF21	THIOREDOXIN M3, CHLOROPLASTIC	coord: 27..165
None	No IPR available	CDD	cd02947	TRX_family	coord: 66..160 e-value: 5.90409E-29 score: 100.325
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 62..159 e-value: 3.9E-24 score: 84.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 37..165 score: 12.740091
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 64..161 e-value: 7.8E-29 score: 97.8
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 80..98
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 57..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025064.1	Sed0025064.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity