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Sed0024987 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAAAGAAAAAAAAGGGCCTTCAAAATGGCAAATAAGCTTAATGTGATTTTGGTCTTGGCTATGTCAATGGCTGCATTTGCATGCCATGTTGCTGCAAGAGCTGCCCCAAATGATGGGGCAAAAGGCCTCAATGACCAAAAGAACTTCTTCACCTATGGCGGCCTAGGTGCCTTCTCCGGGCTCGGCGGTGGCAATGGTGGGCTTGGAGGAGGCGGTGGCTTAGGCGGGCTCGGAGGTGGGATTGGGGGACTCGGAGGGGGCGGTGGCTTCAATGGGCTTGGTGGTGGCATTGGTGGATACGGTGGGGGCGGTAGCGGTGGTATCGGAGGCGGTGTTGGGGGTGGCGTGCTCGGCAGGATTGGTGGAATTGGAGGGATTGGTGGTGGTTTTGTTAAGATCCCTTGAAGCAAATTTGGGAGGGTTTTGTGTTTGTTTTGATATGTTTTATGTTGTTTTGATGTTATTTGCAATGTTTGGGTGTTTGTTTAAGGTTATGGGAAAAACTATGTAATGGGTGTGTGGGTGTTTGTTTTTCAATATTTTAGTTACTAACTATCTTGTTGGTAAGGATGTATGAAAAGATTTTGCTTGCTATCCCTTTCTAATTTTAGGAAAATTTTCAAATA AAATTAAAGAAAAAAAAGGGCCTTCAAAATGGCAAATAAGCTTAATGTGATTTTGGTCTTGGCTATGTCAATGGCTGCATTTGCATGCCATGTTGCTGCAAGAGCTGCCCCAAATGATGGGGCAAAAGGCCTCAATGACCAAAAGAACTTCTTCACCTATGGCGGCCTAGGTGCCTTCTCCGGGCTCGGCGGTGGCAATGGTGGGCTTGGAGGAGGCGGTGGCTTAGGCGGGCTCGGAGGTGGGATTGGGGGACTCGGAGGGGGCGGTGGCTTCAATGGGCTTGGTGGTGGCATTGGTGGATACGGTGGGGGCGGTAGCGGTGGTATCGGAGGCGGTGTTGGGGGTGGCGTGCTCGGCAGGATTGGTGGAATTGGAGGGATTGGTGGTGGTTTTGTTAAGATCCCTTGAAGCAAATTTGGGAGGGTTTTGTGTTTGTTTTGATATGTTTTATGTTGTTTTGATGTTATTTGCAATGTTTGGGTGTTTGTTTAAGGTTATGGGAAAAACTATGTAATGGGTGTGTGGGTGTTTGTTTTTCAATATTTTAGTTACTAACTATCTTGTTGGTAAGGATGTATGAAAAGATTTTGCTTGCTATCCCTTTCTAATTTTAGGAAAATTTTCAAATA ATGGCAAATAAGCTTAATGTGATTTTGGTCTTGGCTATGTCAATGGCTGCATTTGCATGCCATGTTGCTGCAAGAGCTGCCCCAAATGATGGGGCAAAAGGCCTCAATGACCAAAAGAACTTCTTCACCTATGGCGGCCTAGGTGCCTTCTCCGGGCTCGGCGGTGGCAATGGTGGGCTTGGAGGAGGCGGTGGCTTAGGCGGGCTCGGAGGTGGGATTGGGGGACTCGGAGGGGGCGGTGGCTTCAATGGGCTTGGTGGTGGCATTGGTGGATACGGTGGGGGCGGTAGCGGTGGTATCGGAGGCGGTGTTGGGGGTGGCGTGCTCGGCAGGATTGGTGGAATTGGAGGGATTGGTGGTGGTTTTGTTAAGATCCCTTGA MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGGIGGGVGGGVLGRIGGIGGIGGGFVKIP Homology
BLAST of Sed0024987 vs. NCBI nr
Match: XP_011652144.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN59369.1 hypothetical protein Csa_000879 [Cucumis sativus]) HSP 1 Score: 102.1 bits (253), Expect = 3.7e-18 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 0
BLAST of Sed0024987 vs. NCBI nr
Match: XP_008447334.1 (PREDICTED: acanthoscurrin-2-like [Cucumis melo] >KAA0053623.1 acanthoscurrin-2-like [Cucumis melo var. makuwa] >TYJ97692.1 acanthoscurrin-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-17 Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 0
BLAST of Sed0024987 vs. NCBI nr
Match: XP_038887967.1 (acanthoscurrin-1-like [Benincasa hispida]) HSP 1 Score: 94.0 bits (232), Expect = 1.0e-15 Identity = 84/127 (66.14%), Postives = 94/127 (74.02%), Query Frame = 0
BLAST of Sed0024987 vs. NCBI nr
Match: XP_022931134.1 (acanthoscurrin-2-like [Cucurbita moschata]) HSP 1 Score: 93.2 bits (230), Expect = 1.7e-15 Identity = 91/150 (60.67%), Postives = 103/150 (68.67%), Query Frame = 0
BLAST of Sed0024987 vs. NCBI nr
Match: XP_023532938.1 (acanthoscurrin-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 92.8 bits (229), Expect = 2.2e-15 Identity = 92/168 (54.76%), Postives = 106/168 (63.10%), Query Frame = 0
BLAST of Sed0024987 vs. ExPASy TrEMBL
Match: A0A0A0LEM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814360 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 0
BLAST of Sed0024987 vs. ExPASy TrEMBL
Match: A0A5A7UCJ9 (Acanthoscurrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00690 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18 Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 0
BLAST of Sed0024987 vs. ExPASy TrEMBL
Match: A0A1S3BI24 (acanthoscurrin-2-like OS=Cucumis melo OX=3656 GN=LOC103489805 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18 Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 0
BLAST of Sed0024987 vs. ExPASy TrEMBL
Match: A0A6J1ETH1 (acanthoscurrin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437404 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 8.3e-16 Identity = 91/150 (60.67%), Postives = 103/150 (68.67%), Query Frame = 0
BLAST of Sed0024987 vs. ExPASy TrEMBL
Match: A0A6J1K6J1 (glycine-rich protein 23-like OS=Cucurbita maxima OX=3661 GN=LOC111491611 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 9.2e-15 Identity = 91/168 (54.17%), Postives = 104/168 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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