Sed0024930 (gene) Chayote v1

Overview


Name	Sed0024930
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CSL zinc finger domain-containing protein
Location	LG01: 59371613 .. 59374613 (-)
RNA-Seq Expression	Sed0024930
Synteny	Sed0024930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGATTGTTACATAACCATCATAAATTAATTTTCAAATTTCGTAAGGTAAGGATAAAGGAGTTTCCACTTCTTTCAATCCAGATTCGTCTGCTTTTCATCCGCCATTGTAAAAGGCGTCCAAAAAGCTTCCAATCCAACAATGGCGACGACGACGAGAATCATCGTAACAGTGGCGATGGAGAAGCTTCTACTATTGCTAATGGCGCTGATACTTCTTCGCTCCGAAGCTGCAAATACAAACAATGTGTACCAACCTTGTGCCGACGCCAAGATTCAGAGATCCGACGGTTTCACCTTCGGAATCGCATTCTCTTCCAGAGACTCCTTCTTCTTCAACCAGTCTCTTCAGCTCTCGCCGTGTGACCGCCGCCTCTCTCTGGCGGCGTCTTCCTCGCGGCTTGTTGTTTTCAGACCTAGAGTCGACCAGATCTCCCTTCTCTCCATCAATACTTCCGATTTCTTTCCGGTACTTGCTCGATCTTCATTCTCTGTTTTGGATTACTGATTTCAATGCTTATACAGTGCCGTTTCTAATTTGATCCAAGTTTTTATTGCGCGTTTCTTTCCATCTATAGACGTTGCTAGAACTAGGTTATATTTGTCTGGTTAGGGATTCTTGATCTTACTTTTTATATTTAAATCGGAGGCCATCTTACAAAATCATTATCACTTCCGTTTCTTACGCAGTTATATTTTGTTGCAATATATGATGAAGTAATGAATCTATGACAATCTATCTAGTTATTAATTTTTGCTGGCTTTTTTGCAACAAAGTGTAATAGTGTCAATTGTAAGATTAGTCAAAGTGTAGGTAAGTTGGTAAGAATCTTCACAAATATATTATAAGAACTGATGAGACTTGCTAAAGAAGAATGAGTTTTTTTTTTTTTGGCTGTGAGTGTCCGAGCCATCTTACGGGCACTTCGACTATATACTCACGTGATATACCACATGACCCTTCAACGTTTGGTCGTAGGAAATTAAAATCATTTACTAGGTAGATGACCACTATGGATTTTGAACTCATAATTTCTTAAATTTTCAAGACTCTCTTTGACCACTAGGTCAACCTATGATGATTATGAAGAGTGAGAATTATCTTGCAATCTATGGCACAATGACTTGTCTCTCAATGATAAGTTGCTTGTTACGAGTTTAGAAATCTCGTTCGTTTTGCTAAGTGTGTTCAAAGACGAAACTAGTTGGATAATCTACTTGTTATTCATTTTCACTTCTTTTTTAATGGTTGGGAGTGGAGCTTCGCTACCCTATATCCAAGAATACCATGTCCTGACCTGGGAGACAACAAGGGTTTTCTATTTCAAGCATTTCCCAACAGCTTTGAACTAGAGAAGTCTGCGGGAGGGAGCACACCTCAAAGTTCGTAGTCTCAACTAACTGGGTTGCCCCTTCATTCTCACTTCCATCTCCTACTTAGCTATAACTCTGCAATCTATGCCACTTTCTTTTGTCTTTCAACGATAGGTTACTTGGTATGAGACTATGAGTTTCAAATCTTGTTTGACAGAAGGCGCTCATAGACTGAACTATATAGATATAGTCGTTATGTACACCACCCTTGTTTCCATCTCTTGATCGGCACAATTCCTTGTCTTTCAATGGCAGAATGCTTGGTATGAATTTAAAATCTTGCTTGGTTCATGTAGAAAATTTGATAGACAATATAATCTTGATGTTCATCCTCGCTTCCATCTGTCACTCGGTTATAACTTTGTATTTATTGCCAGATCAGTATTGTCTCTCAATGACAGGTTACTTGGTATGAGTTTAAAATCTCGTTTGATTAAATGTGCCCATAGAGGGAACCAGATAGATATTTATGTCTGTAGTTGTACACTTGTACTTAGCAGAGCAGTTTTCATACGGCATGTATGGAATGGTGAATTACTTCGGTTCTCTTCATATGACTGATAAGTTCATTTATATCAACGGAAACCCTTTCCTCCCCATAAGTTGCAATTTCTTAGAGATATCATTGTATGATCAATCACCTATATAATCAAGTGAGAGAGCATCAGACATCAGTGAGTTATCGTGACTTAAGTCTGGAGGTTTCTCTAATGTTGACCGGACCCCTATTTGGATGCCTCATTAGTTGCTAAAAGAAATTGTTTTACTGCTTGTTAAGTCTATTAGAAATAGCCATATTACTTGATGCCTCACTGTTTCCAGGACACCATTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAATATGCTGCAAGGTCTAAGCCTGCCTTTGTCGCTAATAGCACGTTCATTGTGACGAGTTTCACTCTGGTGAGATTTTAAAATCTGGTAATTGCAAAGTAGACATTAGAAATAAAATGAATCTGATGAATGCAACGCACTTTGGTGAGAGCAGGTACTTGAGTTTGAAAAGGGCAGGCTGCAGAACTTGTACTGGAAGCGAGATGGATGTGCTTCGTGCTCGGGCAAGTCCAGATCTAATTATGTTTGCCTTAACAATCAGGATTGTGCCATCAGAACAACAAGTTGTTTAAAGCGAGGGGGGGATGTGGATTGTAGTCTGGGAATACAGCTGACATTTTCAGGCACAGATAAGCATCTTTCAGCACTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTCTATAGTGTGTACTCAAATCTCATGGATTCTCTCACTGGCCAGTATAATAGGTTCTTCTAATCAGTTATTCATCATACTCCTCTCAAGTTCTGTTGACTTGTAACTTCTATACATTTGAATGTTCATTATGGTCTCCTGCTTGGCTTTGTTGGTCCATGCTTTTGGCGCCCTTTCCTCTGTATGGGATTATTTCAACTAATTACTAACCTACTGCTGTTTTTTTTTTGTTATTGTTTTTTTTTATCTGAGTATCCTGGCGCGTTTACGTGTGTATAAACTATTTTCACATGACATGTTGTTTGACTTTACAATATTTGGATGCGAAAAAAATTGGTAGGAAATTATTTCTTGAGTAA

mRNA sequence

CAGATTGTTACATAACCATCATAAATTAATTTTCAAATTTCGTAAGGTAAGGATAAAGGAGTTTCCACTTCTTTCAATCCAGATTCGTCTGCTTTTCATCCGCCATTGTAAAAGGCGTCCAAAAAGCTTCCAATCCAACAATGGCGACGACGACGAGAATCATCGTAACAGTGGCGATGGAGAAGCTTCTACTATTGCTAATGGCGCTGATACTTCTTCGCTCCGAAGCTGCAAATACAAACAATGTGTACCAACCTTGTGCCGACGCCAAGATTCAGAGATCCGACGGTTTCACCTTCGGAATCGCATTCTCTTCCAGAGACTCCTTCTTCTTCAACCAGTCTCTTCAGCTCTCGCCGTGTGACCGCCGCCTCTCTCTGGCGGCGTCTTCCTCGCGGCTTGTTGTTTTCAGACCTAGAGTCGACCAGATCTCCCTTCTCTCCATCAATACTTCCGATTTCTTTCCGGACACCATTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAATATGCTGCAAGGTCTAAGCCTGCCTTTGTCGCTAATAGCACGTTCATTGTGACGAGTTTCACTCTGGTACTTGAGTTTGAAAAGGGCAGGCTGCAGAACTTGTACTGGAAGCGAGATGGATGTGCTTCGTGCTCGGGCAAGTCCAGATCTAATTATGTTTGCCTTAACAATCAGGATTGTGCCATCAGAACAACAAGTTGTTTAAAGCGAGGGGGGGATGTGGATTGTAGTCTGGGAATACAGCTGACATTTTCAGGCACAGATAAGCATCTTTCAGCACTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTCTATAGTGTGTACTCAAATCTCATGGATTCTCTCACTGGCCAGTATAATAGGTTCTTCTAATCAGTTATTCATCATACTCCTCTCAAGTTCTGTTGACTTGTAACTTCTATACATTTGAATGTTCATTATGGTCTCCTGCTTGGCTTTGTTGGTCCATGCTTTTGGCGCCCTTTCCTCTGTATGGGATTATTTCAACTAATTACTAACCTACTGCTGTTTTTTTTTTGTTATTGTTTTTTTTTATCTGAGTATCCTGGCGCGTTTACGTGTGTATAAACTATTTTCACATGACATGTTGTTTGACTTTACAATATTTGGATGCGAAAAAAATTGGTAGGAAATTATTTCTTGAGTAA

Coding sequence (CDS)

ATGGCGACGACGACGAGAATCATCGTAACAGTGGCGATGGAGAAGCTTCTACTATTGCTAATGGCGCTGATACTTCTTCGCTCCGAAGCTGCAAATACAAACAATGTGTACCAACCTTGTGCCGACGCCAAGATTCAGAGATCCGACGGTTTCACCTTCGGAATCGCATTCTCTTCCAGAGACTCCTTCTTCTTCAACCAGTCTCTTCAGCTCTCGCCGTGTGACCGCCGCCTCTCTCTGGCGGCGTCTTCCTCGCGGCTTGTTGTTTTCAGACCTAGAGTCGACCAGATCTCCCTTCTCTCCATCAATACTTCCGATTTCTTTCCGGACACCATTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAATATGCTGCAAGGTCTAAGCCTGCCTTTGTCGCTAATAGCACGTTCATTGTGACGAGTTTCACTCTGGTACTTGAGTTTGAAAAGGGCAGGCTGCAGAACTTGTACTGGAAGCGAGATGGATGTGCTTCGTGCTCGGGCAAGTCCAGATCTAATTATGTTTGCCTTAACAATCAGGATTGTGCCATCAGAACAACAAGTTGTTTAAAGCGAGGGGGGGATGTGGATTGTAGTCTGGGAATACAGCTGACATTTTCAGGCACAGATAAGCATCTTTCAGCACTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTCTATAGTGTGTACTCAAATCTCATGGATTCTCTCACTGGCCAGTATAATAGGTTCTTCTAA

Protein sequence

MATTTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSFFFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRKYAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDCAIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLTGQYNRFF

Homology

[Close]

BLAST of Sed0024930 vs. NCBI nr
Match: XP_022943561.1 (uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 uncharacterized protein LOC111484349 [Cucurbita maxima])

HSP 1 Score: 430.6 bits (1106), Expect = 9.0e-117
Identity = 218/247 (88.26%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSF 63
           T R+ VTV ME LLLLLMAL +L SEA NTNNVYQPCAD KIQRSDGFTFGIAFSSRDSF
Sbjct: 3   TVRVFVTVPME-LLLLLMAL-MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 62

Query: 64  FFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRK 123
           FFNQS QLSPCDRRLSLA+ +S+L VFRPRVD+ISLLS+NTSDFFPDT GGYMVAFAGRK
Sbjct: 63  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 122

Query: 124 YAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDC 183
           YAARS+PAFVAN TFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNNQDC
Sbjct: 123 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 182

Query: 184 AIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLT 243
           AIRT+SC  RGG+VDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 183 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 242

Query: 244 GQYNRFF 251
           GQYNRFF
Sbjct: 243 GQYNRFF 247

[Close]

BLAST of Sed0024930 vs. NCBI nr
Match: KAG7010325.1 (hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-116
Identity = 217/247 (87.85%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSF 63
           T R+ VTV ME LLLLLMAL +L SEA NTNNVYQPCAD KIQRSDGFTFGIAFSSRDSF
Sbjct: 3   TVRVFVTVPME-LLLLLMAL-MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 62

Query: 64  FFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRK 123
           FFNQS QLSPCDRRLSLA+ +S+L VFRPRVD+ISLLS+NTSDFFPDT GGYMVAFAGRK
Sbjct: 63  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 122

Query: 124 YAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDC 183
           YAARS+PAFVAN TFIVTSFTLVLEF+KG+LQNLYWKRDGCASCSGKSRS+YVCLNNQDC
Sbjct: 123 YAARSQPAFVANGTFIVTSFTLVLEFQKGKLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 182

Query: 184 AIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLT 243
           AIRT+SC  RGG+VDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 183 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 242

Query: 244 GQYNRFF 251
           GQYNRFF
Sbjct: 243 GQYNRFF 247

[Close]

BLAST of Sed0024930 vs. NCBI nr
Match: XP_023511823.1 (uncharacterized protein LOC111776727 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.3 bits (1100), Expect = 4.5e-116
Identity = 216/247 (87.45%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSF 63
           T R+ VTV ME LLLLLMAL +L SEA NTNNVYQPCAD KIQRSDGFTFGIAFSSRDSF
Sbjct: 3   TARVFVTVPME-LLLLLMAL-MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 62

Query: 64  FFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRK 123
           FFNQS QLSPCDRRLSLA+ +S+L VFRPRVD+ISLLS+NTSDF+PDT GGYMVAFAGRK
Sbjct: 63  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFYPDTFGGYMVAFAGRK 122

Query: 124 YAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDC 183
           YAARS+PAFVAN TFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNNQDC
Sbjct: 123 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 182

Query: 184 AIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLT 243
           AIRT++C  RGG+VDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 183 AIRTSNCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 242

Query: 244 GQYNRFF 251
           GQYNRFF
Sbjct: 243 GQYNRFF 247

[Close]

BLAST of Sed0024930 vs. NCBI nr
Match: XP_038900700.1 (uncharacterized protein LOC120087841 [Benincasa hispida])

HSP 1 Score: 427.2 bits (1097), Expect = 1.0e-115
Identity = 220/250 (88.00%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 1   MATTTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSR 60
           +  T R  VTV M KLLLLLM LI + SEAANTNNVYQPCAD KIQRSDGFTFGIAFSSR
Sbjct: 30  IVATMRFFVTVPM-KLLLLLMPLI-VHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 89

Query: 61  DSFFFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFA 120
           DSFF NQS QLSPCDRRLSLAA +S+L VFRPRVD+ISLLSINTSDFFPD  GGYMVAFA
Sbjct: 90  DSFFSNQSHQLSPCDRRLSLAALNSQLAVFRPRVDEISLLSINTSDFFPDAFGGYMVAFA 149

Query: 121 GRKYAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNN 180
           GRKYAARS+PAFVANSTFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNN
Sbjct: 150 GRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 209

Query: 181 QDCAIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMD 240
           QDCAIRT+SC  RGG+VDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLYSVYSNLMD
Sbjct: 210 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLMD 269

Query: 241 SLTGQYNRFF 251
           SLTGQYNRFF
Sbjct: 270 SLTGQYNRFF 277

[Close]

BLAST of Sed0024930 vs. NCBI nr
Match: XP_008449601.1 (PREDICTED: uncharacterized protein LOC103491438 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 2.2e-115
Identity = 216/248 (87.10%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALIL-LRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDS 63
           T R+ VT+ M+ LLLLLM LIL + SEAANTNNVYQPCAD KIQRSDGFTFGIAFSSRDS
Sbjct: 3   TVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDS 62

Query: 64  FFFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGR 123
           FF NQS QLSPCDRRLSLA+ +S+L VFRPRVDQISLLSINTSDFFPD  GGYMVAFAGR
Sbjct: 63  FFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGR 122

Query: 124 KYAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQD 183
           KYAARS+PAFVAN+TFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNNQD
Sbjct: 123 KYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQD 182

Query: 184 CAIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSL 243
           CAIRT+SC  RGG+VDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLYSVYSNL DSL
Sbjct: 183 CAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRDSL 242

Query: 244 TGQYNRFF 251
           T QYNRFF
Sbjct: 243 TSQYNRFF 250

[Close]

BLAST of Sed0024930 vs. ExPASy TrEMBL
Match: A0A6J1JBU3 (uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.4e-117
Identity = 218/247 (88.26%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSF 63
           T R+ VTV ME LLLLLMAL +L SEA NTNNVYQPCAD KIQRSDGFTFGIAFSSRDSF
Sbjct: 3   TVRVFVTVPME-LLLLLMAL-MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 62

Query: 64  FFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRK 123
           FFNQS QLSPCDRRLSLA+ +S+L VFRPRVD+ISLLS+NTSDFFPDT GGYMVAFAGRK
Sbjct: 63  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 122

Query: 124 YAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDC 183
           YAARS+PAFVAN TFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNNQDC
Sbjct: 123 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 182

Query: 184 AIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLT 243
           AIRT+SC  RGG+VDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 183 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 242

Query: 244 GQYNRFF 251
           GQYNRFF
Sbjct: 243 GQYNRFF 247

[Close]

BLAST of Sed0024930 vs. ExPASy TrEMBL
Match: A0A6J1FS19 (uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC111448296 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.4e-117
Identity = 218/247 (88.26%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSF 63
           T R+ VTV ME LLLLLMAL +L SEA NTNNVYQPCAD KIQRSDGFTFGIAFSSRDSF
Sbjct: 3   TVRVFVTVPME-LLLLLMAL-MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 62

Query: 64  FFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRK 123
           FFNQS QLSPCDRRLSLA+ +S+L VFRPRVD+ISLLS+NTSDFFPDT GGYMVAFAGRK
Sbjct: 63  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 122

Query: 124 YAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDC 183
           YAARS+PAFVAN TFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNNQDC
Sbjct: 123 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 182

Query: 184 AIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLT 243
           AIRT+SC  RGG+VDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 183 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 242

Query: 244 GQYNRFF 251
           GQYNRFF
Sbjct: 243 GQYNRFF 247

[Close]

BLAST of Sed0024930 vs. ExPASy TrEMBL
Match: A0A1S3BNB9 (uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 216/248 (87.10%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALIL-LRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDS 63
           T R+ VT+ M+ LLLLLM LIL + SEAANTNNVYQPCAD KIQRSDGFTFGIAFSSRDS
Sbjct: 3   TVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDS 62

Query: 64  FFFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGR 123
           FF NQS QLSPCDRRLSLA+ +S+L VFRPRVDQISLLSINTSDFFPD  GGYMVAFAGR
Sbjct: 63  FFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGR 122

Query: 124 KYAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQD 183
           KYAARS+PAFVAN+TFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNNQD
Sbjct: 123 KYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQD 182

Query: 184 CAIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSL 243
           CAIRT+SC  RGG+VDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLYSVYSNL DSL
Sbjct: 183 CAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRDSL 242

Query: 244 TGQYNRFF 251
           T QYNRFF
Sbjct: 243 TSQYNRFF 250

[Close]

BLAST of Sed0024930 vs. ExPASy TrEMBL
Match: A0A0A0KEG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.1e-115
Identity = 211/247 (85.43%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSF 63
           T R+  T+  + LLLL+  ++++ SEAANTNNVYQPCAD KIQRSDGFTFGIAFSSRDSF
Sbjct: 16  TVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 75

Query: 64  FFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRK 123
           F NQS QLSPCDRRLSLA+ +S+L VFRPRVDQISLLSINTSDFFPD  GGYMVAFAGRK
Sbjct: 76  FANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRK 135

Query: 124 YAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDC 183
           YAARS+PAFVANSTFIVTSFTLVLEF+KGRLQNLYWKRDGCASCSGKSRS+YVCLNNQDC
Sbjct: 136 YAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 195

Query: 184 AIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLT 243
           AIRT+SC  RGG+VDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLY+VYSNL DSLT
Sbjct: 196 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLT 255

Query: 244 GQYNRFF 251
           GQYNRFF
Sbjct: 256 GQYNRFF 262

[Close]

BLAST of Sed0024930 vs. ExPASy TrEMBL
Match: A0A6J1DHN7 (uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020583 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.6e-114
Identity = 212/247 (85.83%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 4   TTRIIVTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSF 63
           T R+ VT  ME  LLLL+  +LL SEAANTNNVYQPCAD KIQRSDGF+FGIAFSSRDSF
Sbjct: 3   TMRVFVTAPME--LLLLLVALLLHSEAANTNNVYQPCADTKIQRSDGFSFGIAFSSRDSF 62

Query: 64  FFNQSLQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRK 123
           FFNQS QLSPCDRRLSL + +S+L VFRPRVD+ISLL+INTSDFFPD+ GGYMVAFAGRK
Sbjct: 63  FFNQSHQLSPCDRRLSLPSLNSQLAVFRPRVDEISLLTINTSDFFPDSFGGYMVAFAGRK 122

Query: 124 YAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDC 183
           YAARS+PAFVANSTFIVTSFTLVLEFEKGRLQNL+WKRDGC+SCSGKSRS+YVCLNNQDC
Sbjct: 123 YAARSQPAFVANSTFIVTSFTLVLEFEKGRLQNLFWKRDGCSSCSGKSRSSYVCLNNQDC 182

Query: 184 AIRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLT 243
           AIRT+SC  RGG VDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 183 AIRTSSCRNRGGTVDCSLGIQLTFSGTDKHLTALNSWYEVKNLRQYSLYSVYSNLMDSLT 242

Query: 244 GQYNRFF 251
            QYNRFF
Sbjct: 243 SQYNRFF 247

[Close]

BLAST of Sed0024930 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 350.1 bits (897), Expect = 1.4e-96
Identity = 174/242 (71.90%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 9   VTVAMEKLLLLLMALILLRSEAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSFFFNQS 68
           +T+ +   ++L +AL      + NTN +Y PC+D +IQRSDGFTFGIAFSSR SFF NQ+
Sbjct: 7   LTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQT 66

Query: 69  LQLSPCDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRKYAARS 128
           + LSPCDRRLSLAA +S+  VFRP++D+ISLLSINTS FFPD  GGYMVAFAGRKYAARS
Sbjct: 67  VLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARS 126

Query: 129 KPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDCAIRTT 188
            PAF+ANSTFIVTSFTLV+EF+KGRLQNLYWKRDGCASC G    N+VCLN QDCAIRT 
Sbjct: 127 IPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKG--NQNFVCLNKQDCAIRTP 186

Query: 189 SCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLTGQYNR 248
           SC  RGG VDCSLGIQL FSGTDKHL+ LNSWYEV+NL+QYSLY +YSNL  SLT Q+N 
Sbjct: 187 SCKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNN 246

Query: 249 FF 251
           FF
Sbjct: 247 FF 246

[Close]

BLAST of Sed0024930 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-75
Identity = 144/243 (59.26%), Postives = 179/243 (73.66%), Query Frame = 0


Query: 16  LLLLLMALILLRS--EAANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSFFF---NQSLQ 75
           LL  L A +L  S  EA + N VY PC+D+ +   DGFTFGIAF+++DSFF    ++S+Q
Sbjct: 6   LLCCLFAAVLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQ 65

Query: 76  LSPCDRRLSLAASSSRLVVFRPRVDQISLLSINT---SDFFPDTIGGYMVAFAGRKYAAR 135
            SPCD R      +S + VFRP+VD+I+LL+INT   S F PD   GYMVAFAG KYAAR
Sbjct: 66  YSPCDHRHLSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAAR 125

Query: 136 SKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDCAIRT 195
           S P  VA+S  IVTSFTLVLEF+KGRL+N++WK+DGC+ CSG S+  +VCLN ++CAI+ 
Sbjct: 126 SLPIMVADSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSK--FVCLNKEECAIKP 185

Query: 196 TSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLTGQYN 251
            +C  +GG VDCSLGIQL FSGTDKH +ALNSWYEV NL+QYSLY +YSNL DSLT  + 
Sbjct: 186 QNCKNQGGQVDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFK 245

[Close]

BLAST of Sed0024930 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-67
Identity = 126/240 (52.50%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 17  LLLLMALILLRSE---AANTNNVYQPCADAKIQRSDGFTFGIAFSSRDSFFFNQSLQLSP 76
           ++++M ++++  +   AA+ N VY PC+D +I + DGFT GIA SS+++FF +Q +QLSP
Sbjct: 126 IMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ-VQLSP 185

Query: 77  CDRRLSLAASSSRLVVFRPRVDQISLLSINTSDFFPDTIGGYMVAFAGRKYAARSKPAFV 136
           CD RL LAA  ++L +FRP+VD+ISLLSI+TS F P   GG+MV FAG KYAARS P  V
Sbjct: 186 CDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKV 245

Query: 137 ANSTFIVTSFT---------LVLEFEKGRLQNLYWKRDGCASCSGKSRSNYVCLNNQDCA 196
           A+ +  +T+FT         LVLEF+KG LQNL+WK  GC  C G   S+ VCLN  DCA
Sbjct: 246 ADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCA 305

Query: 197 IRTTSCLKRGGDVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYSVYSNLMDSLTG 245
           + T+ C   GG  +C++GIQ+ FSGTD++L +LN+WYEV NLRQYSL  +Y+N +DSL+G
Sbjct: 306 VPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364

[Close]

BLAST of Sed0024930 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-13
Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 115 YMVAFAGRKYAARSKPAFVANSTFIVTSFTLVLEFEKGRLQNLYWKRDGCA 166
           Y V   G +  +   PAF+ANSTFIVTSFT V+EF+KGRLQNLYWKRD CA
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCA 52

The following BLAST results are available for this feature:

BLAST of Sed0024930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943561.1	9.0e-117	88.26	uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 unchar...	[more]
KAG7010325.1	2.0e-116	87.85	hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023511823.1	4.5e-116	87.45	uncharacterized protein LOC111776727 [Cucurbita pepo subsp. pepo]	[more]
XP_038900700.1	1.0e-115	88.00	uncharacterized protein LOC120087841 [Benincasa hispida]	[more]
XP_008449601.1	2.2e-115	87.10	PREDICTED: uncharacterized protein LOC103491438 [Cucumis melo]	[more]

BLAST of Sed0024930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0024930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBU3	4.4e-117	88.26	uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349...	[more]
A0A6J1FS19	4.4e-117	88.26	uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC1114482...	[more]
A0A1S3BNB9	1.1e-115	87.10	uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=...	[more]
A0A0A0KEG2	4.1e-115	85.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1	[more]
A0A6J1DHN7	1.6e-114	85.83	uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Sed0024930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44150.1	1.4e-96	71.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	1.4e-75	59.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	1.1e-67	52.50	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	3.4e-13	66.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 13..250
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 13..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024930.1	Sed0024930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding