Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGCCTTGTGAACAAAGCAGTGGTTGCATGTTCATTTTCACATGACAACCAAACCAAACCATATAATAATAAACTCTTCTTCTTCTTCTTCTTGTTTGTAAGATGGGTATGGCTGTAGGGCTTCACAGCAAACCCAGCACCAGCAGAGGAAAGCCTTATGTTCTCATGTTGCTCGTTGCGTTTGGCGCAGCCTTGCTTGGTGTCATGCTCCTTCACAAGTTCAGAGAAATTCGTGTCTGCAACCTTCTTCTTATAACTAGAGACCAACAACTACATTCCTTTCAACACCTTCTTCAGGTCATCTCTTCATCTCTCTCTCTCTCTCTCACTTTTAGAACCGACAACTCGAATAATTTGGACCCAATTCAAATTATACGAGATGGATTAGTTCTCGAGTTGACTATATAAATGTGTGCGTAAGATTAACTATCTAGATAAATTCTTAGCGTATTAGTATAGAACATTCATTAACAAGATACACATCTCTGATTTTAAGTTAAATATCAGGTAATTTTCTTTATTTTTTTTACAAATTTATGGAGTATGTATGAGGTTTTGAAGAACTCAACTCAACCCATAGAGTTGGATCTGAAAGTTTGAGTTGGTCCTCGAGTATGTATGAGGTTGAATTTTCTAATACATTGAGTTGGATCTGAAAGTTTGAATTGGTCCAAAAAAAGTCTTAAGTCTCATACTATGTACGCCCTGCCCTACTCGCTTTCATGTAAATGTTCTCTGACTCTTAATGCCATTGCTGTATTACTCCATCATTGCTAAACTTTTTCTTGTTTTGAATTTGAACAGAGGGAAAGAGATCGGAGTAAGGAATTGGAGAAGAGCAATGAAGACATGAAATCTTTGTTGTACTTGCTTCGAACGCAGAAAATGGAGCTTGATAGGAGGCTGCTGGAGTTGCAATCGACCATCTACTCGCTCAAAGAGAAGCAGAAGATTGTAAATGTTGCACTCCATCACAAGCAGAGTGAGATCAAAATGTTGAGGGAGAAAGAAAGTGAAAATAGGAATGAGAATTCTCAACTGGTTGATTTAAGACAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGACCTAAGACATCGACTTGACTTTCGTGGAGCTGTGGCTGCTGACAATCCGTCAGACCCACATGAGGATAACAGAGGGGAGGGCAAATCGACAGATATCGGCGAGCGAAGCACTTCAAAAAGTGATGAAACTGCAACTCATAAAGCCGAGGAAAGGCAGAAGCAAGAGAATTTGCAAGACAAGGGTGAAAATGTCGAGTCAAAACTCGACAACGACCACAAGGAGACAGAAGTTAAAGAATCTGAAGCAGGTGAACATCAGAGAGCTGACAAGATCCTGGAGAGTAGAGTGAAGATGGAAATAGAGACAGGCAAATATGGTCATAGAAGGAAGACAAGAGGAAAGAGATGGAGATACATAGCCAAGAACAGTGCAGTGGATAATGGATGGCGACTGATTTCGAAGAAAATTAAACTGGAAAACAACAGAAATTTGGATGATAGAGTCATTAGCACAATCCATAGGAAGTTTGTTAAAGAGGATAATCCAGAGGAAGAACCTACAAAAAATCTGACAGAGAATGAAAGCAAAATGTTGAAACAAGAATTGAATTCAAAGAACTGTGATACTTCGAGCAAAGATGTGAATGACAAGCAAACAGGGAATGGAGAGGTGGGGGATGGTAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCTAACTGACTCGAAAAGCGAAGAAAAACAAGAGCCAAAAAGGGAGGAAGATAGTCGCTTCAATAGAGAATCCGACTATGAGGTTGTAGAAGACGTCGAAGAAGAAGAAGAAAACAAGGATGAGATAGAGGAGTCTGAATTTTAA
mRNA sequence
CTTGGCCTTGTGAACAAAGCAGTGGTTGCATGTTCATTTTCACATGACAACCAAACCAAACCATATAATAATAAACTCTTCTTCTTCTTCTTCTTGTTTGTAAGATGGGTATGGCTGTAGGGCTTCACAGCAAACCCAGCACCAGCAGAGGAAAGCCTTATGTTCTCATGTTGCTCGTTGCGTTTGGCGCAGCCTTGCTTGGTGTCATGCTCCTTCACAAGTTCAGAGAAATTCGTGTCTGCAACCTTCTTCTTATAACTAGAGACCAACAACTACATTCCTTTCAACACCTTCTTCAGAGGGAAAGAGATCGGAGTAAGGAATTGGAGAAGAGCAATGAAGACATGAAATCTTTGTTGTACTTGCTTCGAACGCAGAAAATGGAGCTTGATAGGAGGCTGCTGGAGTTGCAATCGACCATCTACTCGCTCAAAGAGAAGCAGAAGATTGTAAATGTTGCACTCCATCACAAGCAGAGTGAGATCAAAATGTTGAGGGAGAAAGAAAGTGAAAATAGGAATGAGAATTCTCAACTGGTTGATTTAAGACAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGACCTAAGACATCGACTTGACTTTCGTGGAGCTGTGGCTGCTGACAATCCGTCAGACCCACATGAGGATAACAGAGGGGAGGGCAAATCGACAGATATCGGCGAGCGAAGCACTTCAAAAAGTGATGAAACTGCAACTCATAAAGCCGAGGAAAGGCAGAAGCAAGAGAATTTGCAAGACAAGGGTGAAAATGTCGAGTCAAAACTCGACAACGACCACAAGGAGACAGAAGTTAAAGAATCTGAAGCAGGTGAACATCAGAGAGCTGACAAGATCCTGGAGAGTAGAGTGAAGATGGAAATAGAGACAGGCAAATATGGTCATAGAAGGAAGACAAGAGGAAAGAGATGGAGATACATAGCCAAGAACAGTGCAGTGGATAATGGATGGCGACTGATTTCGAAGAAAATTAAACTGGAAAACAACAGAAATTTGGATGATAGAGTCATTAGCACAATCCATAGGAAGTTTGTTAAAGAGGATAATCCAGAGGAAGAACCTACAAAAAATCTGACAGAGAATGAAAGCAAAATGTTGAAACAAGAATTGAATTCAAAGAACTGTGATACTTCGAGCAAAGATGTGAATGACAAGCAAACAGGGAATGGAGAGGTGGGGGATGGTAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCTAACTGACTCGAAAAGCGAAGAAAAACAAGAGCCAAAAAGGGAGGAAGATAGTCGCTTCAATAGAGAATCCGACTATGAGGTTGTAGAAGACGTCGAAGAAGAAGAAGAAAACAAGGATGAGATAGAGGAGTCTGAATTTTAA
Coding sequence (CDS)
ATGGGTATGGCTGTAGGGCTTCACAGCAAACCCAGCACCAGCAGAGGAAAGCCTTATGTTCTCATGTTGCTCGTTGCGTTTGGCGCAGCCTTGCTTGGTGTCATGCTCCTTCACAAGTTCAGAGAAATTCGTGTCTGCAACCTTCTTCTTATAACTAGAGACCAACAACTACATTCCTTTCAACACCTTCTTCAGAGGGAAAGAGATCGGAGTAAGGAATTGGAGAAGAGCAATGAAGACATGAAATCTTTGTTGTACTTGCTTCGAACGCAGAAAATGGAGCTTGATAGGAGGCTGCTGGAGTTGCAATCGACCATCTACTCGCTCAAAGAGAAGCAGAAGATTGTAAATGTTGCACTCCATCACAAGCAGAGTGAGATCAAAATGTTGAGGGAGAAAGAAAGTGAAAATAGGAATGAGAATTCTCAACTGGTTGATTTAAGACAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGACCTAAGACATCGACTTGACTTTCGTGGAGCTGTGGCTGCTGACAATCCGTCAGACCCACATGAGGATAACAGAGGGGAGGGCAAATCGACAGATATCGGCGAGCGAAGCACTTCAAAAAGTGATGAAACTGCAACTCATAAAGCCGAGGAAAGGCAGAAGCAAGAGAATTTGCAAGACAAGGGTGAAAATGTCGAGTCAAAACTCGACAACGACCACAAGGAGACAGAAGTTAAAGAATCTGAAGCAGGTGAACATCAGAGAGCTGACAAGATCCTGGAGAGTAGAGTGAAGATGGAAATAGAGACAGGCAAATATGGTCATAGAAGGAAGACAAGAGGAAAGAGATGGAGATACATAGCCAAGAACAGTGCAGTGGATAATGGATGGCGACTGATTTCGAAGAAAATTAAACTGGAAAACAACAGAAATTTGGATGATAGAGTCATTAGCACAATCCATAGGAAGTTTGTTAAAGAGGATAATCCAGAGGAAGAACCTACAAAAAATCTGACAGAGAATGAAAGCAAAATGTTGAAACAAGAATTGAATTCAAAGAACTGTGATACTTCGAGCAAAGATGTGAATGACAAGCAAACAGGGAATGGAGAGGTGGGGGATGGTAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCTAACTGACTCGAAAAGCGAAGAAAAACAAGAGCCAAAAAGGGAGGAAGATAGTCGCTTCAATAGAGAATCCGACTATGAGGTTGTAGAAGACGTCGAAGAAGAAGAAGAAAACAAGGATGAGATAGAGGAGTCTGAATTTTAA
Protein sequence
MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSFQHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVALHHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPHEDNRGEGKSTDIGERSTSKSDETATHKAEERQKQENLQDKGENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHRRKTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDDRVISTIHRKFVKEDNPEEEPTKNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDSKSEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEESEF
Homology
BLAST of Sed0024836 vs. NCBI nr
Match:
XP_023532871.1 (golgin subfamily A member 6-like protein 22 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-108
Identity = 270/460 (58.70%), Postives = 322/460 (70.00%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG+ G+HSK S SRG+PY LMLL+AFGAALLGVMLLHKFRE R+CNLLL D+ LHSF
Sbjct: 1 MGVVAGVHSKLSNSRGRPYALMLLIAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+ERDRSKELEK+NED+K ++LLRTQKMELDRRLLELQSTI SL+++QKI+ VAL
Sbjct: 61 QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIKVAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIKMLREKE+EN NENSQ+V L Q LKQKEDELEDLR RL+ RGAVAA++PSDPH
Sbjct: 121 QEKQSEIKMLREKETENGNENSQVVVLTQRLKQKEDELEDLRRRLESRGAVAANDPSDPH 180
Query: 181 ED-----------------NRGEGKSTDIGERSTSKSD----ETATHKAEER-------- 240
ED NRGE K D E STSK D ET T K+EE
Sbjct: 181 EDSTKTEEQSEILLESMKNNRGESK-PDFSEESTSKRDETETETETQKSEETPERREKEA 240
Query: 241 ---QKQENLQDKGENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHR 300
QKQ + +D GE ESK+ NDHK E +SEA E+QRADKIL +KM+ ETGKYGH
Sbjct: 241 AKVQKQVSSEDDGE--ESKITNDHKGEEGHDSEAIENQRADKILNDGMKMKTETGKYGHT 300
Query: 301 RKTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDDRV-ISTIHRKFVK-----EDNP 360
RK RGKRWRYIAK + DNGWRLISKK K ENNR+L+D V ST +RKF+K E+
Sbjct: 301 RKMRGKRWRYIAKKRSGDNGWRLISKKRKQENNRHLEDSVATSTTNRKFIKGGTFNEEKM 360
Query: 361 EEEPTKNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDS 420
+E P + E ++ ++ELN ++ N +VGD SIKQNP EE EL
Sbjct: 361 KEYPEEAREEENKRLKEEELNRES--------------NSDVGDDSIKQNPDEENELKVK 420
Query: 421 KSEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEE 423
KSEEKQE ++E+D FNRES+ +V +DV +EE NK+E E+
Sbjct: 421 KSEEKQEQEQEDDGHFNRESNSDVGDDV-KEETNKEETED 442
BLAST of Sed0024836 vs. NCBI nr
Match:
XP_022947452.1 (golgin subfamily A member 6-like protein 22 [Cucurbita moschata])
HSP 1 Score: 402.5 bits (1033), Expect = 4.5e-108
Identity = 270/460 (58.70%), Postives = 320/460 (69.57%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG+ G+HSK S SRG+PY LMLLVAFGAALLGVMLLHKFRE R+CNLLL D+ LHSF
Sbjct: 1 MGVVAGVHSKLSNSRGRPYALMLLVAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+ERDRSKELEK+NED+K ++LLRTQKMELDRRLLELQSTI SL+++QKI+ +AL
Sbjct: 61 QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIRIAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIKMLREKE+EN NENSQ+V L Q LKQKEDELEDLR RL RGAVAA++PSDPH
Sbjct: 121 QEKQSEIKMLREKETENGNENSQVVVLTQRLKQKEDELEDLRRRLKSRGAVAANDPSDPH 180
Query: 181 ED-----------------NRGEGKSTDIGERSTSKSD----ETATHKAEER-------- 240
ED NRGE K D E STSK D ET T K+EE
Sbjct: 181 EDSIKIEEQSEILLESMKNNRGESK-PDFSEGSTSKRDETETETETQKSEETPERREKEG 240
Query: 241 ---QKQENLQDKGENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHR 300
QKQ + +D GE ESK+ NDHK E +SEA E+QRADKIL +KM+ ETGKYGH
Sbjct: 241 AKVQKQVSSEDDGE--ESKITNDHKGEEGNDSEAIENQRADKILNDGMKMKTETGKYGHT 300
Query: 301 RKTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDDRV-ISTIHRKFVK-----EDNP 360
RK RGKRWRYIAK + DNGWRLISKK K ENNRNL+D V ST +RKF+K E+
Sbjct: 301 RKMRGKRWRYIAKKRSGDNGWRLISKKRKQENNRNLEDSVATSTTNRKFIKGGTFNEEKM 360
Query: 361 EEEPTKNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDS 420
+E P + E ++ ++ELN ++ N +VGD SIKQNP EE EL
Sbjct: 361 KEYPEEAREEENKRLKEEELNRES--------------NSDVGDDSIKQNPDEENELKVK 420
Query: 421 KSEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEE 423
KSEEKQE ++++D FNRES+ V +DV +EE NK+E E+
Sbjct: 421 KSEEKQEQEQDDDGHFNRESNSHVGDDV-KEETNKEETED 442
BLAST of Sed0024836 vs. NCBI nr
Match:
KAG7034932.1 (hypothetical protein SDJN02_01725 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 396.7 bits (1018), Expect = 2.4e-106
Identity = 267/459 (58.17%), Postives = 316/459 (68.85%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG+ G+HSK S SRG+PY LMLLVAFGAALLGVMLLHKFRE R+CNLLL D+ LHSF
Sbjct: 1 MGVVAGVHSKLSNSRGRPYALMLLVAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+ERDRSKELEK+NED+K ++LLRTQKMELDRRLLELQSTI SL+++QKI+ +AL
Sbjct: 61 QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIRIAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIKMLREKE+EN NENSQ+V L Q LKQKEDELEDLR RL RGAVAA+ PSDPH
Sbjct: 121 QEKQSEIKMLREKETENGNENSQVVVLTQRLKQKEDELEDLRRRLKSRGAVAANVPSDPH 180
Query: 181 ED----------------NRGEGKSTDIGERSTSKSD----ETATHKAEER--------- 240
ED N E D E STSK D ET T K+EE
Sbjct: 181 EDSTKIEEQSEILLESMKNNREESKPDFSEGSTSKRDETETETETQKSEETPERREKEGA 240
Query: 241 --QKQENLQDKGENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHRR 300
QKQ + +D GE ESK+ ND K E +SEA E+QRADKIL +KM+ ETGKYGH R
Sbjct: 241 KVQKQVSSEDDGE--ESKITNDRKGEEGNDSEAIENQRADKILNDGMKMKTETGKYGHTR 300
Query: 301 KTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDDRV-ISTIHRKFVK-----EDNPE 360
K RGKRWRYIAK + DNGWRLISKK K ENNRNL+D V ST +RKF+K E+ +
Sbjct: 301 KMRGKRWRYIAKKRSGDNGWRLISKKRKQENNRNLEDSVATSTTNRKFIKGGTFNEEKMK 360
Query: 361 EEPTKNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDSK 420
E P + E ++ ++ELN ++ N +VGD SIKQNP EE EL K
Sbjct: 361 EYPEEAREEENKRLKEEELNRES--------------NSDVGDDSIKQNPDEENELKVKK 420
Query: 421 SEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEE 423
SEEKQE ++E+D FNRES+ +V +DV +EE NK+E E+
Sbjct: 421 SEEKQEQEQEDDGHFNRESNSDVGDDV-KEETNKEETED 442
BLAST of Sed0024836 vs. NCBI nr
Match:
XP_038900518.1 (eukaryotic translation initiation factor 5B-like [Benincasa hispida])
HSP 1 Score: 395.6 bits (1015), Expect = 5.5e-106
Identity = 279/491 (56.82%), Postives = 326/491 (66.40%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG LHSK S+SRG+PY LMLL+AFG ALLGVMLLHKFRE R+CNLLL DQ LHSF
Sbjct: 1 MGAVGNLHSKASSSRGRPYALMLLIAFGVALLGVMLLHKFRERRICNLLLKRTDQDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L QRERDRSKELEK NEDM S LYLL+TQKMELDRRLLELQSTI SL++ QKI+NVAL
Sbjct: 61 QLLFQRERDRSKELEKKNEDMTSSLYLLQTQKMELDRRLLELQSTIDSLRDDQKIINVAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIK LR+KE E+ NEN Q+V L QSLKQKEDELEDLRHRL+ G V AD+PSD
Sbjct: 121 QEKQSEIKALRQKEIESGNENPQVVALTQSLKQKEDELEDLRHRLESLGTVTADDPSDSD 180
Query: 181 -----------------------------EDNRGEGKSTDIGERSTSKSDETATHK---- 240
++NRG+ KST E TS+S+E T K
Sbjct: 181 PRVDSTMSEEPKVQLLESSGGKGEETESMDNNRGDSKSTSFREGRTSRSNEIGTQKLEET 240
Query: 241 -------AEERQKQENLQDKGENV--------ESKLDNDHKETEVKESEAGEHQRADKIL 300
EERQKQENL D+GENV E+K+ ND+KE ++SE E+ RADKI
Sbjct: 241 HERREMEGEERQKQENLGDEGENVNGRQADGEETKITNDNKEKNAEDSEGVENGRADKIP 300
Query: 301 ESRVKMEIETGKYGHRRKTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDD-RVIST 360
S +KM+ ETGKYG+ RK RGKRWRYIAK VDNGWRLISKK+ NNRNLDD VIST
Sbjct: 301 RSGMKMKTETGKYGNTRKIRGKRWRYIAKRRTVDNGWRLISKKM---NNRNLDDGAVIST 360
Query: 361 IHRKFV-------KEDNPE---------EEPTKNLTENESKMLKQE-LNSKNCDTSSKDV 420
HRKF+ KE++ E EE ++L E E+KMLKQE LNS+N +T
Sbjct: 361 THRKFIEGAVEKMKEEHAEEAKMKEEHAEEVKQSLMEKENKMLKQENLNSENGNTLR--- 420
Query: 421 NDKQTGNGEVGDGSIKQNPGEEMELTDSKSEEKQEPKREEDSRFNRESDYEVVEDVEEEE 426
+Q GN ++GDGSIKQNPGEEME +SKSEEKQEP+ ++ E E+ +EEE
Sbjct: 421 --EQNGNEDMGDGSIKQNPGEEMEQKESKSEEKQEPE---------QAAMESNEEGKEEE 473
BLAST of Sed0024836 vs. NCBI nr
Match:
KAG6604816.1 (hypothetical protein SDJN03_02133, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 395.2 bits (1014), Expect = 7.1e-106
Identity = 266/459 (57.95%), Postives = 316/459 (68.85%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG+ G+HSK S SRG+PY LMLLVAFGAALLGVMLLHKFRE R+CNLLL D+ LHSF
Sbjct: 1 MGVVAGVHSKLSNSRGRPYALMLLVAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+ERDRSKELEK+NED+K ++LLRTQKMELDRRLLELQSTI SL+++QKI+ +AL
Sbjct: 61 QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIRIAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIKMLREKE+EN NENSQ+V L Q LKQKEDELEDLR RL RGAVAA+ PSDPH
Sbjct: 121 QEKQSEIKMLREKETENGNENSQVVVLTQRLKQKEDELEDLRRRLKSRGAVAANVPSDPH 180
Query: 181 ED----------------NRGEGKSTDIGERSTSKSD----ETATHKAEER--------- 240
ED N E D E STSK D ET T K+EE
Sbjct: 181 EDSTKIEEQSEILLESMKNNREESKPDFSEGSTSKRDETETETETQKSEETPERREKEGA 240
Query: 241 --QKQENLQDKGENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHRR 300
QKQ + +D GE ESK+ ND K E +SEA E+QRADKIL +KM+ ETGKYGH R
Sbjct: 241 KVQKQVSSEDDGE--ESKITNDRKGEEGNDSEAIENQRADKILNDGMKMKTETGKYGHTR 300
Query: 301 KTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDDRV-ISTIHRKFVK-----EDNPE 360
K RGKRWRYIAK + DNGWRLISKK K +NNRNL+D V ST +RKF+K E+ +
Sbjct: 301 KMRGKRWRYIAKKRSGDNGWRLISKKRKQKNNRNLEDSVATSTTNRKFIKGGTFNEEKMK 360
Query: 361 EEPTKNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDSK 420
E P + E ++ ++ELN ++ N +VGD SIKQNP EE EL K
Sbjct: 361 EYPEEAREEENKRLKEEELNRES--------------NSDVGDDSIKQNPDEENELKVKK 420
Query: 421 SEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEE 423
SEEKQE ++E+D FNRES+ +V +DV +EE NK+E E+
Sbjct: 421 SEEKQEQEQEDDGHFNRESNSDVGDDV-KEETNKEETED 442
BLAST of Sed0024836 vs. ExPASy TrEMBL
Match:
A0A6J1G6H6 (golgin subfamily A member 6-like protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111451310 PE=4 SV=1)
HSP 1 Score: 402.5 bits (1033), Expect = 2.2e-108
Identity = 270/460 (58.70%), Postives = 320/460 (69.57%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG+ G+HSK S SRG+PY LMLLVAFGAALLGVMLLHKFRE R+CNLLL D+ LHSF
Sbjct: 1 MGVVAGVHSKLSNSRGRPYALMLLVAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+ERDRSKELEK+NED+K ++LLRTQKMELDRRLLELQSTI SL+++QKI+ +AL
Sbjct: 61 QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIRIAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIKMLREKE+EN NENSQ+V L Q LKQKEDELEDLR RL RGAVAA++PSDPH
Sbjct: 121 QEKQSEIKMLREKETENGNENSQVVVLTQRLKQKEDELEDLRRRLKSRGAVAANDPSDPH 180
Query: 181 ED-----------------NRGEGKSTDIGERSTSKSD----ETATHKAEER-------- 240
ED NRGE K D E STSK D ET T K+EE
Sbjct: 181 EDSIKIEEQSEILLESMKNNRGESK-PDFSEGSTSKRDETETETETQKSEETPERREKEG 240
Query: 241 ---QKQENLQDKGENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHR 300
QKQ + +D GE ESK+ NDHK E +SEA E+QRADKIL +KM+ ETGKYGH
Sbjct: 241 AKVQKQVSSEDDGE--ESKITNDHKGEEGNDSEAIENQRADKILNDGMKMKTETGKYGHT 300
Query: 301 RKTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDDRV-ISTIHRKFVK-----EDNP 360
RK RGKRWRYIAK + DNGWRLISKK K ENNRNL+D V ST +RKF+K E+
Sbjct: 301 RKMRGKRWRYIAKKRSGDNGWRLISKKRKQENNRNLEDSVATSTTNRKFIKGGTFNEEKM 360
Query: 361 EEEPTKNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDS 420
+E P + E ++ ++ELN ++ N +VGD SIKQNP EE EL
Sbjct: 361 KEYPEEAREEENKRLKEEELNRES--------------NSDVGDDSIKQNPDEENELKVK 420
Query: 421 KSEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEE 423
KSEEKQE ++++D FNRES+ V +DV +EE NK+E E+
Sbjct: 421 KSEEKQEQEQDDDGHFNRESNSHVGDDV-KEETNKEETED 442
BLAST of Sed0024836 vs. ExPASy TrEMBL
Match:
A0A6J1CFX1 (cilia- and flagella-associated protein 251-like OS=Momordica charantia OX=3673 GN=LOC111011066 PE=4 SV=1)
HSP 1 Score: 391.7 bits (1005), Expect = 3.8e-105
Identity = 266/454 (58.59%), Postives = 321/454 (70.70%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG+ GLHSK S SRG+PY +M+LVAFGAALLGVMLLHKFRE R+CNLLL DQ LHSF
Sbjct: 1 MGVVGGLHSKASGSRGRPYAVMILVAFGAALLGVMLLHKFRERRICNLLLKRTDQDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L QRERDRSKELEK++EDMK+ LY LRTQKMELDRRLLEL STI SL+++QK +NVAL
Sbjct: 61 QLLFQRERDRSKELEKNSEDMKATLYSLRTQKMELDRRLLELLSTIDSLRDEQKTMNVAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSD-- 180
K+ EIKMLREKE E+RNENSQ+V L QSL+QKE ELE LR R++ RG VA D+P++
Sbjct: 121 KEKKKEIKMLREKELESRNENSQVVALTQSLRQKEAELEVLRRRIESRGGVATDDPAEQD 180
Query: 181 ---PHEDNRGEGKSTDIGERS--TSKSDETATH---KAEERQKQENLQDKG--------- 240
P G++ + E S T K +ET K EERQKQE+++D+G
Sbjct: 181 EQLPESSGSKGGETNEATESSDGTQKDEETPERREMKGEERQKQESMEDEGRKKEAADGE 240
Query: 241 ----ENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHRRKTRGKRWR 300
E ESK+ D K EVK+S A E+QRADKIL+S +KME ETGKYG RK +GKRWR
Sbjct: 241 VRKVEGEESKVTKDQKGEEVKDSRAVENQRADKILKSGMKMETETGKYGRTRKIKGKRWR 300
Query: 301 YIA-KNSAVDNGWRLISKKIKLENNRNLDDR-VISTIHRKFVKEDNPEEEP----TKNLT 360
YIA K + VDNGWRLISKK K E NRNLD+ VIS HR F K + EE K
Sbjct: 301 YIAKKRTVVDNGWRLISKKRKQEINRNLDESGVISMGHRNFFKGEASNEEKMKLYPKEAR 360
Query: 361 ENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDSKSEEKQEPK 420
EN+++ +Q LNS+ D K + +Q+G+GE GDGSI+QNPGE+ EL D KSEEKQEP
Sbjct: 361 ENQTEKERQVLNSRT-DGEQKQNDKQQSGDGEEGDGSIEQNPGEKKELKDLKSEEKQEPG 420
Query: 421 REEDSRFNRESDYEVVEDVEEEEENKDEIEESEF 426
++ D RF++ES+ DV EEEENK+E EESEF
Sbjct: 421 QDADGRFSKESN----SDVREEEENKEETEESEF 449
BLAST of Sed0024836 vs. ExPASy TrEMBL
Match:
A0A6J1I3J6 (golgin subfamily A member 6-like protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111469593 PE=4 SV=1)
HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104
Identity = 265/460 (57.61%), Postives = 319/460 (69.35%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG+ G+HSK S SRG+PY LMLL+AFGAALLGVMLLHKFRE R+CNLLL D+ LHSF
Sbjct: 1 MGVVAGVHSKLSNSRGRPYALMLLIAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+ERDRSKELEK+NED+K ++LLRTQKMELDRRLLELQSTI SL+++QKI+ +AL
Sbjct: 61 QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIRIAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIKMLREKE+EN NENSQ+V L Q LKQKEDELEDLR RL+ R AVAA++PSDPH
Sbjct: 121 QEKQSEIKMLREKETENGNENSQVVVLTQRLKQKEDELEDLRRRLESREAVAANDPSDPH 180
Query: 181 ED-----------------NRGEGKSTDIGERSTSKSD----ETATHKAEER-------- 240
ED NRGE K D + STSK D ET T K+EE
Sbjct: 181 EDSTKTEEQSEILLESMKNNRGESK-PDFSKGSTSKRDETETETETQKSEETPERREKEG 240
Query: 241 ---QKQENLQDKGENVESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGHR 300
QKQ + +D GE ESK+ NDHK E +SEA E+QRADKIL +KM+ ETGKYGH
Sbjct: 241 AKVQKQVSSEDDGE--ESKITNDHKGEEGIDSEAIENQRADKILNDGMKMKTETGKYGHT 300
Query: 301 RKTRGKRWRYIAKNSAVDNGWRLISKKIKLENNRNLDDRV-ISTIHRKFVK-----EDNP 360
RK RGKRWRYIAK + DNGWRLISKK ENNRNL+D V ST +RKF+K E+
Sbjct: 301 RKMRGKRWRYIAKKRSGDNGWRLISKKRMQENNRNLEDSVATSTTNRKFIKGGTFNEEKM 360
Query: 361 EEEPTKNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEMELTDS 420
+E P + E ++ ++ELN ++ N +VGD SIKQNP EE EL
Sbjct: 361 KEYPEEAREEENKRLKEEELNRES--------------NSDVGDDSIKQNPDEENELKVK 420
Query: 421 KSEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEE 423
KSE+ QE ++E+D FNRES+ +V +DV +EE NK+E E+
Sbjct: 421 KSEQ-QEQEQEDDGHFNRESNSDVGDDV-KEETNKEETED 441
BLAST of Sed0024836 vs. ExPASy TrEMBL
Match:
A0A0A0KG17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124060 PE=4 SV=1)
HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97
Identity = 259/469 (55.22%), Postives = 313/469 (66.74%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG L SK S+SRG+ Y LMLL+AFGAALLGVMLL+KFRE R+CNLLL DQ L SF
Sbjct: 1 MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+E+DRSKEL KS+EDM + LY+LRT+KMELDRRLLELQSTI SL+++QKI +VAL
Sbjct: 61 QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQSEIK LREKE E+ NEN Q+V L +SLKQKEDELE+LR RL+ AVAA++ SD
Sbjct: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
Query: 181 ----------------------------EDNRGEGKSTDIGERSTSKSDETATHKAEERQ 240
++NRG KST E T K + EERQ
Sbjct: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLE--GHEGVEERQ 240
Query: 241 KQENLQDKGENV--------ESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGK 300
KQE L D+GEN E+K+ N+HKE EV SE E+ RA+KI S +KM+ ETGK
Sbjct: 241 KQEKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGK 300
Query: 301 YGHRRKTRGKRWRYIAKNSAVDNGWRLISKKIKLEN-NRNL-DDRVISTIHRKFV--KED 360
YG+ RK RGKRWRYIAK AVDNGWRLISKK K ++ NRNL D+R T H KF+ E+
Sbjct: 301 YGNTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRADGTTHGKFIDGAEE 360
Query: 361 NPEEEPT----KNLTENESKMLKQELNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEE 420
+EE T +NL E E+KM+++ LNS+N D + ++ GNG+V D SIKQNPGEE
Sbjct: 361 KMKEEHTQGAKENLMEMENKMVQENLNSEN------DTSREKNGNGDVEDDSIKQNPGEE 420
Query: 421 MELTDSKSEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEESEF 426
ME DSKSEE QEP+R DS+ ED +EEEENK+E EESEF
Sbjct: 421 MEQNDSKSEENQEPERGMDSK----------EDGKEEEENKEEPEESEF 451
BLAST of Sed0024836 vs. ExPASy TrEMBL
Match:
A0A5D3BRY2 (Micronuclear linker histone polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00600 PE=4 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 2.5e-96
Identity = 259/468 (55.34%), Postives = 311/468 (66.45%), Query Frame = 0
Query: 1 MGMAVGLHSKPSTSRGKPYVLMLLVAFGAALLGVMLLHKFREIRVCNLLLITRDQQLHSF 60
MG L SK S+SRG+ Y LMLL+AFGAALLGVMLLHKFRE R+CNLLL DQ L SF
Sbjct: 1 MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLHKFRERRICNLLLKRTDQDLRSF 60
Query: 61 QHLLQRERDRSKELEKSNEDMKSLLYLLRTQKMELDRRLLELQSTIYSLKEKQKIVNVAL 120
Q L Q+E DRSKEL KS EDM + LYLLR+QKMELDRRLLELQSTI SL+++QKI +VAL
Sbjct: 61 QLLFQKETDRSKELAKSLEDMTAALYLLRSQKMELDRRLLELQSTIDSLRDEQKITSVAL 120
Query: 121 HHKQSEIKMLREKESENRNENSQLVDLRQSLKQKEDELEDLRHRLDFRGAVAADNPSDPH 180
KQ EIK LREKE ++ N+N Q+V L QSLKQKEDELE+LR R GA+AA++ SDP
Sbjct: 121 QEKQREIKALREKEIDSGNDNPQVVALTQSLKQKEDELEELRRRHKSPGAIAANDSSDPR 180
Query: 181 ED--------------------------NRGEGKSTDIGERSTSKSDETATHKAEERQKQ 240
D NRG ST E T K +ET + EERQKQ
Sbjct: 181 GDSTMSEEKRDQLLESGNGKGESESMDNNRGGSTSTGFHEIETQKLEETHEGE-EERQKQ 240
Query: 241 ENLQDKGENV-------ESKLDNDHKETEVKESEAGEHQRADKILESRVKMEIETGKYGH 300
E L D+GEN E+K+ N+HKE E + E E+ RA+KI S ++M+ ETGKYG+
Sbjct: 241 EKLGDEGENANGREVEGETKITNEHKEKEGGDFEEVENGRANKIARSEIRMKTETGKYGN 300
Query: 301 RRKTRGKRWRYIAKNSAVDNGWRLISKKIKLE--NNRNLDD-RVISTIHRKFV--KEDNP 360
RK RGKRWRYI K AVDNGWRLISKK+K E NNRNL+D R I T H KF E+
Sbjct: 301 TRKIRGKRWRYIVKRRAVDNGWRLISKKMKKENGNNRNLNDIRAIGTTHGKFTDGAEEKM 360
Query: 361 EEEPT----KNLTENESKMLKQE-LNSKNCDTSSKDVNDKQTGNGEVGDGSIKQNPGEEM 420
+EE T +NL E E+KM+++E LNS+N DTS ++ GNG+VGD IK+NPGEEM
Sbjct: 361 KEERTQEAKENLMEKENKMVQEENLNSENDDTSR-----EKNGNGDVGDDRIKKNPGEEM 420
Query: 421 ELTDSKSEEKQEPKREEDSRFNRESDYEVVEDVEEEEENKDEIEESEF 426
E D KS+EK+EP+R D + ED +EEEENK+E EESEF
Sbjct: 421 EPNDLKSKEKEEPERGTDFK----------EDGKEEEENKEEPEESEF 452
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023532871.1 | 1.5e-108 | 58.70 | golgin subfamily A member 6-like protein 22 [Cucurbita pepo subsp. pepo] | [more] |
XP_022947452.1 | 4.5e-108 | 58.70 | golgin subfamily A member 6-like protein 22 [Cucurbita moschata] | [more] |
KAG7034932.1 | 2.4e-106 | 58.17 | hypothetical protein SDJN02_01725 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_038900518.1 | 5.5e-106 | 56.82 | eukaryotic translation initiation factor 5B-like [Benincasa hispida] | [more] |
KAG6604816.1 | 7.1e-106 | 57.95 | hypothetical protein SDJN03_02133, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1G6H6 | 2.2e-108 | 58.70 | golgin subfamily A member 6-like protein 22 OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1CFX1 | 3.8e-105 | 58.59 | cilia- and flagella-associated protein 251-like OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1I3J6 | 1.4e-104 | 57.61 | golgin subfamily A member 6-like protein 22 OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A0A0KG17 | 2.2e-97 | 55.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124060 PE=4 SV=1 | [more] |
A0A5D3BRY2 | 2.5e-96 | 55.34 | Micronuclear linker histone polyprotein-like protein OS=Cucumis melo var. makuwa... | [more] |
Match Name | E-value | Identity | Description | |