Sed0024617 (gene) Chayote v1

Overview


Name	Sed0024617
Type	gene
Organism	Sechium edule (Chayote v1)
Description	YABBY protein
Location	LG03: 8067850 .. 8073672 (-)
RNA-Seq Expression	Sed0024617
Synteny	Sed0024617

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTTTACTTCTGTTTTAAGTCAATTTTGAAAGAGGGAGGAAAAAAACATAGATCTAGAATAAGGGTTATTTAGTTGAGCTGTCATTCCAATCAAATCAGTCAATCACAAGCTCAACCAATTGCAATCACAAAAAGAAAAGAGAGGAAGAATTGTAAAAAGGAAAAAAAAAAGGCACAAATTTGTTAAATATGTCATCTTCTTCCCTTCCCACTACCTTCCCCCAACTTCCTCCTCCTTCTGACCAGCTCTGCTATGTCCATTGCAACATTTGCGACACGGTTTTGGCGGTATGTGGCTCGGTTTTTCGACTCAGTAAGGTTTATTGTTCTGCTAATAATTCTGTTGGATGTAGTTTTTGATCTTCGAGTTTGTGTTCATTAGGTCAGTGTTCCTTCCGCTAGTTTGTTCAAAACGGTCACCGTCCGGTGCGGCCACTGCTCGAACCTTCTACCGGTGAACATGCTTCAGCTTCCTTCTCCAAATCAGTTCCATGGCTTTGCTCACTCCACTACTTTCTTCTCTCCCAATACTCACAATTTTCTCGTACTTAGTTACCCTATGCTCTATTAATTGATTACAATTTTGTTTGGGTTTTGATGTATTTAGATATTAGCCTTCTTTACTAACCTTTGTCTTTGTTTGATTCCAACTTACTCCCAAAAATACGTGCTGCTTTAAAAATCTTTAGGTCATTTCAAAAGAATAAATTAAAAAAAAAATCACAATTAGATTCTAAATCATTTGGAACATTATATACAATCTTGAAGTTTATTCAATTCTTTTATATCCACAAGTTAATTTTCTTGCTAATCACAAGCTTCCTCATGTAATCATTTGATTTTTTTTTCTTTTGAAAATTAAATCTACAAATATCATTTTCATCTCTACGTATTTTGTTATGTTATCCACTTTTTGTTATTTAATCATTTGATTTTTTGTTTTTTAAACTTTGTTATTTTTAAAATTTTAATTATAAACTAAGGTATTTTGTTATGGCGGACAAATGATTGGAAAAAAAGCTAAATTTTGGAAACCCAAAAATCAAAGCTAATCAAACAAAAAGCCTTGTTTTTTGAGTTTTTGGTTGTTGTTTTCAGGAAGAGATCTCAAATCCAAATCCAAATCCAAATCCAAATTCAAATCCAAATCCAAATTTTCTGATGAACCAAACAGATGGAATTGATTTGACAATGGCGACTCGTGTAGCCAATGATGTTCCAAGGCAACCCCCAAGCATAAATAGACGTGAGATTAATTGATTTTTTCTCATCTAATTTATATATTTAGTTATTTATTTATTTATTTTGTTCTGTTTTTTGTGTGTGTGACGTCTTCATATAAACTTGGAACTCTTGACTGGTCTAAAATTGGTGTCAATGATATATCCTTTCTACATTGTTCTATAAATTAAAGGAATTACTTTTTATGATGAACAAACCCTTGAAAAAATACCATATTAATGTCCAAAAATAAAGTCTTTCTCTTTTTCCTTTTTATGATGCAAAGAAAATGGAAGAAAGAAGAAAAGAACAAAATGCCTAGAGTAAAGATATACTTTTGTAGGAGGGTTCACTTTCAAACCTAGGTATTAATTATTTAGTAACAAAGAATAACATGAACATTATTTTTTAAATTATTATTAACTCATGATAATTCTCATTGGGTAATTGGATGCAGTTAAAAAATTATTTATGAGCACAAAAAGGTTAAATGCTTATGAGAAAATACTTAATACCTTGCCTAGTTTAGCTATAAATACTTAATACCTAGGTACATGGAGGTTTTTGAAGATTATTTATATGGGCCTTTGAAGACCTTCATCCAAACACACCTAAGGGTCTCAAAGGGAAGAAATTTTGTCATGTACTTATGCAAAATCATTTTAACTAAATGTTTTTTAAGACTGTTTGTATGGAGGAGTTATGAGAAGTTTGGTGAAGACAAAATCATGTTTTAATTGAAGGTTATGAGTGGTTGTGACAAAAATTCTCGTTTAAGTGGAGGACGTTATGAATGGTTGTGTGAGAAAACCATAGTTTGAATTGAGTGGTGGTAGTAAAATAAAGCACTTGTTGAAGTAGAAGTCATATTGTATCCGAAGAATTTGTATATGGATATTTAGGATTTTATAGATCTTGTTGAAGCAGCTTCATCAAAATAAGGTTGGATCAACTTCTCAATAAACCCTCACAAATTTTTCATCCAAACATACCCTAAATAATTAAAGAAACCTTTTTATGTTTTTTGTAATAAAAAAAAAACTTTTGGAGTCATGTCAGGTCCTTTAGGTTGTTGATTACATATAGAACAATATTTAGTTAATTAATTAAGACATCAAATGGGACAACATAAAACAAAAGATAGTACTGAAATTTTGTTGTCATATATTATTTGGTTGATATCTTTTATAAACTTCATTAACTATTCTCTTGGTTCTATGTGATTGAGTCTGCAACCCTATTTGCTTTTCTTATGTTTAGGCTGCAACCCTATAACACTTTAGAAAGTAAAAAAAAAAGTGAATGAATTAGTAGACTGAAAATGCATGAGAGATTATCAGAAGCATTTTATGGTATAGTTTCAGAAACTTATTTGAAAATCAAAGGTTACTATACAAATTGAAATCAATTTTCTCACATCTCTGAGACTCTGATTTGTTTTTTTAAAGAAAAATTCTGTTTATTCTTTCTCTTATTGTCAAAAAAAAAAAAGGTTTATTCTTTCTTTTAGTTTTCTGGTATATTTTCAATTTTTGTCCCTCCAAACTTCTAAACATCTTCTTTTACTAAATTTTTTTCATTTATTTATTTAACTAATAGATACTAATATTGATAGGTTTTGATCAAAATAAGCTTAGTTCAGCGGTAATATTGACATGTATCCTCGAGGAAAACCGTTATGTTTTTTTAAGTTCGAGAAAAAAGATTAAAATAAGATATAAACCTAAATTTGAAAATATATATATATATATATAACCTTGAAATGTTGATTATACTTTTTTGACATGCAGCTCCAAAAAAGAAAGCAGACAAGTATTAGGGTTTGTAGATAAGCTGATAAGGGCAATTGATGTGTTTAAATTATTATTTTTTTTAATTTTAAAAAAGTGTTTAAATTTTTTAGAGAATTGAAAATAAATGTTGATTATATTTATTTGACATACAGCTCCAGAAAAGAGACAAAGAGTACCATCTGCTTACAACCGATTCATCAAGTGAGTAGTAGCAATCATCTTTCCTATGTAGTTTACATCTTTTCGAATTCCCAAATTGAAATGTTAAATATGTAACGGTTTGGAGTGAGAGATTCGAACTCGTAATTAGATATGTTTTTTTGGCCCATGGTAATAAAAAGTTGTTTCTTAATGAATATTACTCTTTTTCATTTCTTAGTCTCCACTATGTGTCATTTGTAAGTCATCTTTATGTCAATTTTTCGTATGGACTTGTAATAAATTTTTATTTTTGTAAAGTTAAGGATAATATTACAAGTTTAGGAGGAATATAATTATTTTTAAAACATATATATAATGGGTAAAAGGTAAATTTATCCTATCATTCAAAGAAAGTTAGAGTTTAGTTTTCATGATTCCAAAATCTTGAATTTAGTGTCTGCAGTTTGAAAAAAGTTAGGATTTAATTCCTATGATTTGAAGAAAGTTAAAATTTAGTCCATTTAATTTTAAAAATTAAAATTTAGTCCCTATAATTTAATAAAACCTAAATTATAGTCCTTATGGTATTGATGTATTAAATACATGAAAGCTTACTATTCATACATAAATAATATGATTTTTTTTTTCGTGTTATATCAATCACTTAACTCATAATTTCATCATTGATGTAAGTAGTTAATTTGTTAGCGATTAGGATGTGAAGAAATATTTTTTAGATTTTATCCTAGTTTCTAAAATTTATATTTTTTTGAAGCATAAAACTAAACTATATAATGCAGGGATGAGATCCAACGCATTAAGGCTGCAAATCCAGACATTTCACACAGAGAAGCCTTCAGTGCTGCTGCTAAGAATGTATGTATTCTTACTTTCAAAATTTTGCAATAAATTTCAAAAGTTTTGCCATAAATAAGTAGATCATTATTTGTGACCAATATTTCTCTGTTTTATTAATCATGTTTTGGTTTCTGATATCTGTTTTGTTGATCTTCTTTTCCTTTTCATGGTGAAAAAGTGGGCCCACTTCCCTTACATTCATTTTGGTCTCCCTTCTGATCATACTTCCAAACAGGTCAAATCATCTCATCTTTGTTTCAGAGTAATTATATGCTCAAGTTGCAGATTGAAAGATTTTCATTTTTTGATTTCTTGAAATTTTTGTTTTGTCTTTTTAATTCACTTTGATGGCATTTTTTAAAACTTGTTGATTTATGCTAAACATCCAAAAGCTTAAGCTGATGGATTGCGGTTAATTTAATTATATCAACCAACACTCTCTTTCACTTATGGGTTTTGAAATTTGAGAAATGCCCAACAAGTGGAATTTAATTTTAATTGGTTGAATTATATTAAACCACCAATCAATCCAAAAGTCTAAACTAATGGATTGAGGTAAATTTAATTATATCAATGAACAAAACTAAACTAATTAAACAAAGAAAATGTGTGCAAATTTTAAATCATAAATTGGTATTGTCTTATGTTGAATAGTTTTGATTGAAAAACGTACTATTCGAATGTGCATGTTTTATTAGAATATGTATGTCGTGTCCAAAACTCAATAAGTGAATATATAAAATCTAAGACTTTGCCATATAAAAAAACATATAAACATTAAAAGGGAAAATCTTCAATTGGGAATTTATGTGGTGTTCCAAATTATACAATAAGTGGTCCACTTATTCTTATATGGCAAATCTGTGTGAGTTCGGATCCTGTATCGTCATCCTCCCTTGAATTTTTTTTTTTTTCGAAGCTAGCCACTCTAAATAGTTATTTGGCTGAATAGTCGACCCTACTACATATTCAAGGGCATGCATGCCTAACGTTCAAAGGTCTCAACCCATATAATAACTAGAGAGATTTTACAAATTAAGCTAACTTTAAGATTTCACATTCAAAATCAATAAATGAGCATACTTTACAACTCTAAGCCTCCAAGTTTTTCTTTAGTAACATTAATTTAGAAAAGAAACATGTCAACTATATGATTTTTTTTAATGGTTAGTAGTTAGAGCTTCATTCTCCTATAGCCGAAGTACCACTTGTCTATCTCAAGGTTATAGTATTGGAATACATCGAAAGATATTCTATATTAAGTTCAGTAGAGGGTCTCAAATTCAGGACCTTAAAAGGAAGCATGCTCTTGAAATTCGAGCCTTCGACCACCTACCCTGCCCCTTGTAGACATTAAGCATATGTATTAAAACGATGAGAACATAATTATTCCTACCATGTTAGCTTAAATTTGTCATTTTTCTCTCTAAATTTGACATTTTTTGGGGGGTTTGTGTAGGAAGGAGAAGATGTTATGTCGAAAGATGTTCGAGTTTTCAGCTCAAACAACATGGGAGTTTCCCCTTGAATCTTGTCTTTTAAGGAACAAGAAGAGATCATTTTCATGTCCAAATTAAAATGGCTTCCCTTGAAAATTCTCTCTTCTGGTCTCAAGATTCCAAGCTCTTTTGTATTATGATTAATTGTGTTGAAGCCTCTACTCTATCAAGTAATTTGAAAATTGACAAAACATTAGTTTCTTTATTAACCCATTACCATTTTTATCCCTTTTTGTGTTTGTAAGTTCTTATAAAGACTGAAGTAGGCAAAGATTTGCCAACCTTCAGTTCGTTAATAACAGCAGCCCG

mRNA sequence

CTCTTTTACTTCTGTTTTAAGTCAATTTTGAAAGAGGGAGGAAAAAAACATAGATCTAGAATAAGGGTTATTTAGTTGAGCTGTCATTCCAATCAAATCAGTCAATCACAAGCTCAACCAATTGCAATCACAAAAAGAAAAGAGAGGAAGAATTGTAAAAAGGAAAAAAAAAAGGCACAAATTTGTTAAATATGTCATCTTCTTCCCTTCCCACTACCTTCCCCCAACTTCCTCCTCCTTCTGACCAGCTCTGCTATGTCCATTGCAACATTTGCGACACGGTTTTGGCGGTCAGTGTTCCTTCCGCTAGTTTGTTCAAAACGGTCACCGTCCGGTGCGGCCACTGCTCGAACCTTCTACCGGTGAACATGCTTCAGCTTCCTTCTCCAAATCAGTTCCATGGCTTTGCTCACTCCACTACTTTCTTCTCTCCCAATACTCACAATTTTCTCGAAGAGATCTCAAATCCAAATCCAAATCCAAATCCAAATTCAAATCCAAATCCAAATTTTCTGATGAACCAAACAGATGGAATTGATTTGACAATGGCGACTCGTGTAGCCAATGATGTTCCAAGGCAACCCCCAAGCATAAATAGACCTCCAGAAAAGAGACAAAGAGTACCATCTGCTTACAACCGATTCATCAAGGATGAGATCCAACGCATTAAGGCTGCAAATCCAGACATTTCACACAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCCCACTTCCCTTACATTCATTTTGGTCTCCCTTCTGATCATACTTCCAAACAGGAAGGAGAAGATGTTATGTCGAAAGATGTTCGAGTTTTCAGCTCAAACAACATGGGAGTTTCCCCTTGAATCTTGTCTTTTAAGGAACAAGAAGAGATCATTTTCATGTCCAAATTAAAATGGCTTCCCTTGAAAATTCTCTCTTCTGGTCTCAAGATTCCAAGCTCTTTTGTATTATGATTAATTGTGTTGAAGCCTCTACTCTATCAAGTAATTTGAAAATTGACAAAACATTAGTTTCTTTATTAACCCATTACCATTTTTATCCCTTTTTGTGTTTGTAAGTTCTTATAAAGACTGAAGTAGGCAAAGATTTGCCAACCTTCAGTTCGTTAATAACAGCAGCCCG

Coding sequence (CDS)

ATGTCATCTTCTTCCCTTCCCACTACCTTCCCCCAACTTCCTCCTCCTTCTGACCAGCTCTGCTATGTCCATTGCAACATTTGCGACACGGTTTTGGCGGTCAGTGTTCCTTCCGCTAGTTTGTTCAAAACGGTCACCGTCCGGTGCGGCCACTGCTCGAACCTTCTACCGGTGAACATGCTTCAGCTTCCTTCTCCAAATCAGTTCCATGGCTTTGCTCACTCCACTACTTTCTTCTCTCCCAATACTCACAATTTTCTCGAAGAGATCTCAAATCCAAATCCAAATCCAAATCCAAATTCAAATCCAAATCCAAATTTTCTGATGAACCAAACAGATGGAATTGATTTGACAATGGCGACTCGTGTAGCCAATGATGTTCCAAGGCAACCCCCAAGCATAAATAGACCTCCAGAAAAGAGACAAAGAGTACCATCTGCTTACAACCGATTCATCAAGGATGAGATCCAACGCATTAAGGCTGCAAATCCAGACATTTCACACAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCCCACTTCCCTTACATTCATTTTGGTCTCCCTTCTGATCATACTTCCAAACAGGAAGGAGAAGATGTTATGTCGAAAGATGTTCGAGTTTTCAGCTCAAACAACATGGGAGTTTCCCCTTGA

Protein sequence

MSSSSLPTTFPQLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNMLQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGIDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAKNWAHFPYIHFGLPSDHTSKQEGEDVMSKDVRVFSSNNMGVSP

Homology

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BLAST of Sed0024617 vs. NCBI nr
Match: XP_022153999.1 (axial regulator YABBY 5-like [Momordica charantia])

HSP 1 Score: 332.0 bits (850), Expect = 3.8e-87
Identity = 174/231 (75.32%), Postives = 184/231 (79.65%), Query Frame = 0


Query: 1   MSSSSLPTTFPQL-----PPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNL 60
           MSSSSLPTTF QL      PP DQLCYVHCNICDTVL VSVP ASLFKTVTVRCGHC+NL
Sbjct: 1   MSSSSLPTTFSQLSPSLPSPPLDQLCYVHCNICDTVLGVSVPPASLFKTVTVRCGHCTNL 60

Query: 61  LPVNMLQ-LPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDG 120
           LPVNM   LPS +QFHGFA S  FF  NTHNFLEEISNP        NPNPN +MNQTDG
Sbjct: 61  LPVNMPPLLPSTDQFHGFARSPAFFPLNTHNFLEEISNP--------NPNPNLVMNQTDG 120

Query: 121 IDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSA 180
            DLTMATRVAND+PRQPP+INRPPEKRQRVPSAYNRFIKDEIQRIK  NPDISHREAFSA
Sbjct: 121 NDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSA 180

Query: 181 AAKNWAHFPYIHFGLPSDHTSK------QEGEDVMSKDVRVFSSNNMGVSP 220
           AAKNWAHFP+I+FG+P   T+K      QEG+DV  KD R   S NMGVSP
Sbjct: 181 AAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 223

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BLAST of Sed0024617 vs. NCBI nr
Match: XP_008448889.1 (PREDICTED: protein YABBY 4-like [Cucumis melo] >XP_016900570.1 PREDICTED: protein YABBY 4-like [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 9.4e-86
Identity = 164/194 (84.54%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM 60
           MSSSSLPTTF QLPPPSDQLCYVHCNICDTVLAVSVPS SLFK VTVRCG+C+NLLPV+M
Sbjct: 1   MSSSSLPTTFSQLPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVSM 60

Query: 61  ---LQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGIDL 120
              + LPSP+QFHGF HSTTFFSPNTHNFLEEI          SNPNPNFLMNQT+GIDL
Sbjct: 61  CGGMLLPSPSQFHGFTHSTTFFSPNTHNFLEEI----------SNPNPNFLMNQTEGIDL 120

Query: 121 TMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAK 180
           TMATRV NDVPRQPP+INRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAK
Sbjct: 121 TMATRVPNDVPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAK 180

Query: 181 NWAHFPYIHFGLPS 192
           NWAHFP+I FG  S
Sbjct: 181 NWAHFPHIRFGSSS 184

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BLAST of Sed0024617 vs. NCBI nr
Match: XP_038876835.1 (protein YABBY 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-84
Identity = 163/196 (83.16%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPP--PSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPV 60
           MSSSS PTTF QLPP  PSD++CYVHCNICDT+LAVSVPS SLFK VTVRCG+C+NLLPV
Sbjct: 1   MSSSSFPTTFSQLPPPSPSDEICYVHCNICDTILAVSVPSTSLFKRVTVRCGYCANLLPV 60

Query: 61  NM---LQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGI 120
           NM   + LPS NQFHGFAHST FFSPNTHNFLEEI          SNPNPNFLMNQT+GI
Sbjct: 61  NMCGGMFLPSSNQFHGFAHSTAFFSPNTHNFLEEI----------SNPNPNFLMNQTEGI 120

Query: 121 DLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAA 180
           DLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIK+EIQRIKAANPDISHREAFSAA
Sbjct: 121 DLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKEEIQRIKAANPDISHREAFSAA 180

Query: 181 AKNWAHFPYIHFGLPS 192
           AKNWAHFP+IHFG  S
Sbjct: 181 AKNWAHFPHIHFGSSS 186

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BLAST of Sed0024617 vs. NCBI nr
Match: XP_004150647.1 (protein YABBY 4 isoform X2 [Cucumis sativus] >XP_031738726.1 protein YABBY 4 isoform X2 [Cucumis sativus] >KGN55900.1 hypothetical protein Csa_009483 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-83
Identity = 163/195 (83.59%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MSSSSLPTTFPQL-PPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVN 60
           MSSSS PTTF QL PPPSDQLCYVHCNICDTVLAVSVPS SLFK VTVRCG+C+NLLPVN
Sbjct: 1   MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVN 60

Query: 61  M---LQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGID 120
           M   + LPSP+QFHGF HSTTF SPNTHNFLEEI          SNPNPNFLMNQT+GID
Sbjct: 61  MCGGMLLPSPSQFHGFTHSTTFLSPNTHNFLEEI----------SNPNPNFLMNQTEGID 120

Query: 121 LTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAA 180
           LTMATRV NDVPRQPP+INRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAA
Sbjct: 121 LTMATRVPNDVPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAA 180

Query: 181 KNWAHFPYIHFGLPS 192
           KNWAHFP+I FG  S
Sbjct: 181 KNWAHFPHIRFGSSS 185

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BLAST of Sed0024617 vs. NCBI nr
Match: XP_038876836.1 (protein YABBY 4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 298.9 bits (764), Expect = 3.6e-77
Identity = 153/183 (83.61%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPP--PSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPV 60
           MSSSS PTTF QLPP  PSD++CYVHCNICDT+LAVSVPS SLFK VTVRCG+C+NLLPV
Sbjct: 1   MSSSSFPTTFSQLPPPSPSDEICYVHCNICDTILAVSVPSTSLFKRVTVRCGYCANLLPV 60

Query: 61  NM---LQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGI 120
           NM   + LPS NQFHGFAHST FFSPNTHNFLEEI          SNPNPNFLMNQT+GI
Sbjct: 61  NMCGGMFLPSSNQFHGFAHSTAFFSPNTHNFLEEI----------SNPNPNFLMNQTEGI 120

Query: 121 DLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAA 179
           DLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIK+EIQRIKAANPDISHREAFSAA
Sbjct: 121 DLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKEEIQRIKAANPDISHREAFSAA 173

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BLAST of Sed0024617 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.4e-52
Identity = 130/240 (54.17%), Postives = 154/240 (64.17%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM 60
           MSSSS P   P     +DQLCYVHC+ CDTVLAVSVP +SLFKTVTVRCGHCSNLL V +
Sbjct: 6   MSSSSAPAFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTV 65

Query: 61  ----LQLPS-PNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPN---------SNPNPN 120
               L LPS  N  H F        P   N LEE+ +   N N N          +PN +
Sbjct: 66  SMRALLLPSVSNLGHSFLPPPP--PPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEH 125

Query: 121 FLMNQTDGIDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDI 180
            +M   +G     +     ++PR PP+ NRPPEKRQRVPSAYNRFIK+EIQRIKA NPDI
Sbjct: 126 LVMATRNG----RSVDHLQEMPRPPPA-NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDI 185

Query: 181 SHREAFSAAAKNWAHFPYIHFGLPSDH-------TSKQEGED-VMSKDVRVFSSNNMGVS 219
           SHREAFSAAAKNWAHFP+IHFGL +DH         +QEGED +M ++    S+ N+GV+
Sbjct: 186 SHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYGSAANVGVA 238

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BLAST of Sed0024617 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-50
Identity = 130/266 (48.87%), Postives = 153/266 (57.52%), Query Frame = 0


Query: 2   SSSSLPTTFP----QLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLP 61
           SSSS    FP      P P++QLCYVHCN CDT+LAV VP +SLFKTVTVRCGHC+NLL 
Sbjct: 3   SSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLS 62

Query: 62  VNM--LQLPSP-----NQFHGFAHSTTFFSPNT-HNFLEEISNPNPNPNPNSNPNPNFLM 121
           VN+  L LP+P     NQ H      +  SP + H  L+E+          +   P+ LM
Sbjct: 63  VNLRGLLLPAPAPAPANQLH---FGPSLLSPTSPHGLLDEV----------AFQTPSLLM 122

Query: 122 NQTDGIDLTMAT-----RVANDVP------------------RQPPSINRPPEKRQRVPS 181
            Q     L+  T       A++ P                    P S NRPPEKRQRVPS
Sbjct: 123 EQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPS 182

Query: 182 AYNRFIKDEIQRIKAANPDISHREAFSAAAKNWAHFPYIHFGLPSDHTSK-----QEG-E 220
           AYNRFIKDEIQRIKA NPDISHREAFSAAAKNWAHFP+IHFGL  D   K     Q+G E
Sbjct: 183 AYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKTFKPQDGSE 242

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BLAST of Sed0024617 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-50
Identity = 130/266 (48.87%), Postives = 153/266 (57.52%), Query Frame = 0


Query: 2   SSSSLPTTFP----QLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLP 61
           SSSS    FP      P P++QLCYVHCN CDT+LAV VP +SLFKTVTVRCGHC+NLL 
Sbjct: 3   SSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLS 62

Query: 62  VNM--LQLPSP-----NQFHGFAHSTTFFSPNT-HNFLEEISNPNPNPNPNSNPNPNFLM 121
           VN+  L LP+P     NQ H      +  SP + H  L+E+          +   P+ LM
Sbjct: 63  VNLRGLLLPAPAPAPANQLH---FGPSLLSPTSPHGLLDEV----------AFQTPSLLM 122

Query: 122 NQTDGIDLTMAT-----RVANDVP------------------RQPPSINRPPEKRQRVPS 181
            Q     L+  T       A++ P                    P S NRPPEKRQRVPS
Sbjct: 123 EQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPS 182

Query: 182 AYNRFIKDEIQRIKAANPDISHREAFSAAAKNWAHFPYIHFGLPSDHTSK-----QEG-E 220
           AYNRFIKDEIQRIKA NPDISHREAFSAAAKNWAHFP+IHFGL  D   K     Q+G E
Sbjct: 183 AYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKTFKPQDGSE 242

[Close]

BLAST of Sed0024617 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.6e-50
Identity = 124/237 (52.32%), Postives = 149/237 (62.87%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM 60
           MSS S     P    PSD LCYV CN C T+LAV+VP  SLFKTVTVRCG C+NLL VNM
Sbjct: 6   MSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNM 65

Query: 61  LQ--LPSPNQFHGFAHSTTFFSPNTHNFLEEI----SNPN---PNPNPNSNPNPNFLMNQ 120
               LP+ NQ        ++F+P   + LEE+    SN N    N +P  N  P+F    
Sbjct: 66  RSYVLPASNQLQLQLGPHSYFNP--QDILEELRDAPSNMNMMMMNQHPTMNDIPSF---- 125

Query: 121 TDGIDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREA 180
                  M     +++P+ PP +NRPPEKRQRVPSAYNRFIK+EIQRIKA NPDISHREA
Sbjct: 126 -------MDLHQQHEIPKAPP-VNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREA 185

Query: 181 FSAAAKNWAHFPYIHFGLPSD-------HTSKQEGED--VMSKDVRVFSSNNMGVSP 220
           FSAAAKNWAHFP+IHFGL  D       +  +QEGED  VM +     ++ N+GV+P
Sbjct: 186 FSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAANVGVTP 228

[Close]

BLAST of Sed0024617 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 6.8e-47
Identity = 118/236 (50.00%), Postives = 137/236 (58.05%), Query Frame = 0


Query: 4   SSLPTTF---------PQLPPP---SDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGH 63
           SS P TF          Q PPP    +QLCYVHCN CDT+LAV VP +SLFKTVTVRCGH
Sbjct: 3   SSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGH 62

Query: 64  CSNLLPVNML------------QLP------SPNQFHGFAHSTTFFSPNTHNFLEEISNP 123
           C+NLL VN+             QLP      SP   HG       F        E+ S  
Sbjct: 63  CANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQAS-- 122

Query: 124 NPNPNPNSNPNPNFLMNQTDGIDLTMATRVANDVPRQP---PSINRPPEKRQRVPSAYNR 183
            PN +  ++ N +   N       + A +     P+QP   PS NR  EKRQRVPSAYNR
Sbjct: 123 -PNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNR 182

Query: 184 FIKDEIQRIKAANPDISHREAFSAAAKNWAHFPYIHFGLPSDHTSKQEGEDVMSKD 207
           FIKDEIQRIKA+NPDI+HREAFSAAAKNWAHFP+IHFGL  D   K+ G  + S+D
Sbjct: 183 FIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTG--IQSQD 233

[Close]

BLAST of Sed0024617 vs. ExPASy TrEMBL
Match: A0A6J1DKR6 (axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111021366 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 174/231 (75.32%), Postives = 184/231 (79.65%), Query Frame = 0


Query: 1   MSSSSLPTTFPQL-----PPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNL 60
           MSSSSLPTTF QL      PP DQLCYVHCNICDTVL VSVP ASLFKTVTVRCGHC+NL
Sbjct: 1   MSSSSLPTTFSQLSPSLPSPPLDQLCYVHCNICDTVLGVSVPPASLFKTVTVRCGHCTNL 60

Query: 61  LPVNMLQ-LPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDG 120
           LPVNM   LPS +QFHGFA S  FF  NTHNFLEEISNP        NPNPN +MNQTDG
Sbjct: 61  LPVNMPPLLPSTDQFHGFARSPAFFPLNTHNFLEEISNP--------NPNPNLVMNQTDG 120

Query: 121 IDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSA 180
            DLTMATRVAND+PRQPP+INRPPEKRQRVPSAYNRFIKDEIQRIK  NPDISHREAFSA
Sbjct: 121 NDLTMATRVANDIPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKTVNPDISHREAFSA 180

Query: 181 AAKNWAHFPYIHFGLPSDHTSK------QEGEDVMSKDVRVFSSNNMGVSP 220
           AAKNWAHFP+I+FG+P   T+K      QEG+DV  KD R   S NMGVSP
Sbjct: 181 AAKNWAHFPHINFGVPPHRTAKKTNMLHQEGDDVTLKDDRFLGSTNMGVSP 223

[Close]

BLAST of Sed0024617 vs. ExPASy TrEMBL
Match: A0A1S4DXY3 (protein YABBY 4-like OS=Cucumis melo OX=3656 GN=LOC103490918 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.6e-86
Identity = 164/194 (84.54%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM 60
           MSSSSLPTTF QLPPPSDQLCYVHCNICDTVLAVSVPS SLFK VTVRCG+C+NLLPV+M
Sbjct: 1   MSSSSLPTTFSQLPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVSM 60

Query: 61  ---LQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGIDL 120
              + LPSP+QFHGF HSTTFFSPNTHNFLEEI          SNPNPNFLMNQT+GIDL
Sbjct: 61  CGGMLLPSPSQFHGFTHSTTFFSPNTHNFLEEI----------SNPNPNFLMNQTEGIDL 120

Query: 121 TMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAK 180
           TMATRV NDVPRQPP+INRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAK
Sbjct: 121 TMATRVPNDVPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAK 180

Query: 181 NWAHFPYIHFGLPS 192
           NWAHFP+I FG  S
Sbjct: 181 NWAHFPHIRFGSSS 184

[Close]

BLAST of Sed0024617 vs. ExPASy TrEMBL
Match: A0A0A0L1N8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G033810 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 9.5e-84
Identity = 163/195 (83.59%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MSSSSLPTTFPQL-PPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVN 60
           MSSSS PTTF QL PPPSDQLCYVHCNICDTVLAVSVPS SLFK VTVRCG+C+NLLPVN
Sbjct: 1   MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVN 60

Query: 61  M---LQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGID 120
           M   + LPSP+QFHGF HSTTF SPNTHNFLEEI          SNPNPNFLMNQT+GID
Sbjct: 61  MCGGMLLPSPSQFHGFTHSTTFLSPNTHNFLEEI----------SNPNPNFLMNQTEGID 120

Query: 121 LTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAA 180
           LTMATRV NDVPRQPP+INRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAA
Sbjct: 121 LTMATRVPNDVPRQPPTINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAA 180

Query: 181 KNWAHFPYIHFGLPS 192
           KNWAHFP+I FG  S
Sbjct: 181 KNWAHFPHIRFGSSS 185

[Close]

BLAST of Sed0024617 vs. ExPASy TrEMBL
Match: A0A6J1KXR1 (protein YABBY 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498508 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.3e-76
Identity = 154/209 (73.68%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPPP---SDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLP 60
           MSS SLPTTF Q PPP   SD LCYVHCNICDTVLAVSVP ASLFKTVTVRCGHC+NLLP
Sbjct: 1   MSSFSLPTTFSQHPPPPPSSDHLCYVHCNICDTVLAVSVPCASLFKTVTVRCGHCANLLP 60

Query: 61  VNM---LQLPSPNQFHGFAHSTT-FFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTD 120
           VNM   + LPSPN FH F  S+T FF+PN HNFLEEI          SNPNPNF MNQTD
Sbjct: 61  VNMRGGMLLPSPNHFHAFPPSSTPFFTPNAHNFLEEI----------SNPNPNFAMNQTD 120

Query: 121 GIDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFS 180
           GIDLTM TRV NDVPR P +INRP EK+QRVPSAYNRFIK+EIQRIKAANPDISHREAFS
Sbjct: 121 GIDLTMVTRVGNDVPRAPSNINRPAEKKQRVPSAYNRFIKEEIQRIKAANPDISHREAFS 180

Query: 181 AAAKNWAHFPYIH-FGLPSDHTSKQEGED 202
           AAAKNWAHFP+IH FG+P  + +     +
Sbjct: 181 AAAKNWAHFPHIHNFGVPPPNNNNNNNNN 199

[Close]

BLAST of Sed0024617 vs. ExPASy TrEMBL
Match: A0A6J1G5H6 (protein YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451065 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.8e-75
Identity = 152/195 (77.95%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 3   SSSLPTTFPQLPPP---SDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVN 62
           S SLPTTF Q PPP   SD LCYVHCN+CDTVLAVSVP ASLFKTVTVRCGHC+NLLPVN
Sbjct: 6   SFSLPTTFSQHPPPPPSSDHLCYVHCNVCDTVLAVSVPCASLFKTVTVRCGHCANLLPVN 65

Query: 63  M---LQLPSPNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGID 122
           M   + LPSPN F    H T FFSPN HNFLEEI          SNPNPNF+MNQTDGID
Sbjct: 66  MRGGMLLPSPNHF----HHTAFFSPNAHNFLEEI----------SNPNPNFVMNQTDGID 125

Query: 123 LTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAA 182
           L MATRV NDVPR PPSINRP EK+QRVPSAYNRFIK+EIQRIKAANPDISHREAFSAAA
Sbjct: 126 LAMATRVGNDVPRPPPSINRPAEKKQRVPSAYNRFIKEEIQRIKAANPDISHREAFSAAA 185

Query: 183 KNWAHFPYIH-FGLP 191
           KNWAHFP+IH FG+P
Sbjct: 186 KNWAHFPHIHNFGVP 186

[Close]

BLAST of Sed0024617 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 205.7 bits (522), Expect = 3.8e-53
Identity = 130/240 (54.17%), Postives = 154/240 (64.17%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM 60
           MSSSS P   P     +DQLCYVHC+ CDTVLAVSVP +SLFKTVTVRCGHCSNLL V +
Sbjct: 6   MSSSSAPAFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTV 65

Query: 61  ----LQLPS-PNQFHGFAHSTTFFSPNTHNFLEEISNPNPNPNPN---------SNPNPN 120
               L LPS  N  H F        P   N LEE+ +   N N N          +PN +
Sbjct: 66  SMRALLLPSVSNLGHSFLPPPP--PPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEH 125

Query: 121 FLMNQTDGIDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDI 180
            +M   +G     +     ++PR PP+ NRPPEKRQRVPSAYNRFIK+EIQRIKA NPDI
Sbjct: 126 LVMATRNG----RSVDHLQEMPRPPPA-NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDI 185

Query: 181 SHREAFSAAAKNWAHFPYIHFGLPSDH-------TSKQEGED-VMSKDVRVFSSNNMGVS 219
           SHREAFSAAAKNWAHFP+IHFGL +DH         +QEGED +M ++    S+ N+GV+
Sbjct: 186 SHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFYGSAANVGVA 238

[Close]

BLAST of Sed0024617 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 198.4 bits (503), Expect = 6.1e-51
Identity = 124/237 (52.32%), Postives = 149/237 (62.87%), Query Frame = 0


Query: 1   MSSSSLPTTFPQLPPPSDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM 60
           MSS S     P    PSD LCYV CN C T+LAV+VP  SLFKTVTVRCG C+NLL VNM
Sbjct: 6   MSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNM 65

Query: 61  LQ--LPSPNQFHGFAHSTTFFSPNTHNFLEEI----SNPN---PNPNPNSNPNPNFLMNQ 120
               LP+ NQ        ++F+P   + LEE+    SN N    N +P  N  P+F    
Sbjct: 66  RSYVLPASNQLQLQLGPHSYFNP--QDILEELRDAPSNMNMMMMNQHPTMNDIPSF---- 125

Query: 121 TDGIDLTMATRVANDVPRQPPSINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREA 180
                  M     +++P+ PP +NRPPEKRQRVPSAYNRFIK+EIQRIKA NPDISHREA
Sbjct: 126 -------MDLHQQHEIPKAPP-VNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREA 185

Query: 181 FSAAAKNWAHFPYIHFGLPSD-------HTSKQEGED--VMSKDVRVFSSNNMGVSP 220
           FSAAAKNWAHFP+IHFGL  D       +  +QEGED  VM +     ++ N+GV+P
Sbjct: 186 FSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAANVGVTP 228

[Close]

BLAST of Sed0024617 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-42
Identity = 111/214 (51.87%), Postives = 134/214 (62.62%), Query Frame = 0


Query: 27  ICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM----LQLPS-PNQFHGFAHSTTFFSP 86
           +CD    VSVP +SLFKTVTVRCGHCSNLL V +    L LPS  N  H F        P
Sbjct: 1   MCDINWQVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPP--PP 60

Query: 87  NTHNFLEEISNPNPNPNPN---------SNPNPNFLMNQTDGIDLTMATRVANDVPRQPP 146
              N LEE+ +   N N N          +PN + +M   +G     +     ++PR PP
Sbjct: 61  PPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNG----RSVDHLQEMPRPPP 120

Query: 147 SINRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAKNWAHFPYIHFGLPSD 206
           + NRPPEKRQRVPSAYNRFIK+EIQRIKA NPDISHREAFSAAAKNWAHFP+IHFGL +D
Sbjct: 121 A-NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMAD 180

Query: 207 H-------TSKQEGED-VMSKDVRVFSSNNMGVS 219
           H         +QEGED +M ++    S+ N+GV+
Sbjct: 181 HPPTKKANVRQQEGEDGMMGREGFYGSAANVGVA 207

[Close]

BLAST of Sed0024617 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-39
Identity = 91/183 (49.73%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 17  SDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNM---LQLPSPNQFHGFA 76
           S+++CYVHC+ C T+LAVSVP ASLF  VTVRCGHC+NLL +N+   L   S    H   
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIH--- 66

Query: 77  HSTTFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGIDLTMATRVANDVPRQPPS 136
                  P+  +    ++  +   +  S  N              ++  +  + PR PP 
Sbjct: 67  ---QDLQPHRQHTTSLVTRKDCASSSRSTNN--------------LSENIDREAPRMPPI 126

Query: 137 INRPPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAKNWAHFPYIHFGLPSDH 196
             RPPEKRQRVPSAYNRFIK+EIQRIKA NP+ISHREAFS AAKNWAHFP+IHFGL  D 
Sbjct: 127 --RPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDG 167

[Close]

BLAST of Sed0024617 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-37
Identity = 86/173 (49.71%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 17  SDQLCYVHCNICDTVLAVSVPSASLFKTVTVRCGHCSNLLPVNMLQLPSPNQFHGFAHST 76
           ++QLCY+ CN C+ +LAV+VP +SLF  VTVRCGHC+NL  VNM                
Sbjct: 8   TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAA------------- 67

Query: 77  TFFSPNTHNFLEEISNPNPNPNPNSNPNPNFLMNQTDGIDLTMATRVANDVPRQPPSINR 136
                     L+ +S PN      + P           I   ++TR       +   +NR
Sbjct: 68  ----------LQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTRTIT----EQRIVNR 127

Query: 137 PPEKRQRVPSAYNRFIKDEIQRIKAANPDISHREAFSAAAKNWAHFPYIHFGL 190
           PPEKRQRVPSAYN+FIK+EIQRIKA NPDISHREAFS AAKNWAHFP+IHFGL
Sbjct: 128 PPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 153

The following BLAST results are available for this feature:

BLAST of Sed0024617 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153999.1	3.8e-87	75.32	axial regulator YABBY 5-like [Momordica charantia]	[more]
XP_008448889.1	9.4e-86	84.54	PREDICTED: protein YABBY 4-like [Cucumis melo] >XP_016900570.1 PREDICTED: protei...	[more]
XP_038876835.1	1.8e-84	83.16	protein YABBY 4-like isoform X1 [Benincasa hispida]	[more]
XP_004150647.1	2.0e-83	83.59	protein YABBY 4 isoform X2 [Cucumis sativus] >XP_031738726.1 protein YABBY 4 iso...	[more]
XP_038876836.1	3.6e-77	83.61	protein YABBY 4-like isoform X2 [Benincasa hispida]	[more]

BLAST of Sed0024617 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XFB1	5.4e-52	54.17	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
A2X7Q3	1.3e-50	48.87	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	1.3e-50	48.87	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
O22152	8.6e-50	52.32	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q01JG2	6.8e-47	50.00	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]

BLAST of Sed0024617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKR6	1.8e-87	75.32	axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111021366 PE=3...	[more]
A0A1S4DXY3	4.6e-86	84.54	protein YABBY 4-like OS=Cucumis melo OX=3656 GN=LOC103490918 PE=3 SV=1	[more]
A0A0A0L1N8	9.5e-84	83.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G033810 PE=3 SV=1	[more]
A0A6J1KXR1	4.3e-76	73.68	protein YABBY 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498508 PE=3...	[more]
A0A6J1G5H6	2.8e-75	77.95	protein YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451065 PE=3 SV=1	[more]

BLAST of Sed0024617 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00180.1	3.8e-53	54.17	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	6.1e-51	52.32	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.2	2.3e-42	51.87	Plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	4.1e-39	49.73	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.0e-37	49.71	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 129..184 e-value: 1.5E-6 score: 30.4
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 129..182
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 16..189 e-value: 1.5E-67 score: 227.4
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 11..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..111
None	No IPR available	PANTHER	PTHR31675:SF4	AXIAL REGULATOR YABBY 3	coord: 11..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024617.1	Sed0024617.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0010154	fruit development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:2000024	regulation of leaf development
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding