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Sed0024606 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCTTCTGTGTTGCGCCGAAGATTGTTTAGAGCTTCCGCCATCGCCCAATTCTTCTGGTTTGAAATCTCTCTCTGTTTTTCTTGATTTATTGCATTCAATTTCTAGTATTTCATGACTCGTGTGTGTGATTGATTCTTCCATGATTTTGGTCGCTTTTGAATGTGCAGTGAACAATGTCGATCGGAGAACTTGCTTGCTCCTATGCTGCCATGATTCTCTACGACGACAACATCTCTATTACTGTATGCTGCTCTTTAATCCTGGCTCCTTCCTTCTGTATTTGGATGATTTACCCTCTGTATTTCGTTTTCCGATCCAAGAGTGATTGGCTTGGTGTGAATTTTAGGAATACTTGCATTTGTCCTGATTTCCATATCCTAAAACAAATAGGACCTGACCAGTTTTTTTAGTTTTGGTTTTTGAAATTTAAGCCTACAATTATTTCACCCTTTTATTTTTTTTCTTACTTAGGTATCTACCTCTTTATGTTTTAAAAAATCAAACCAAAATTTGTATTTTTTTTCTTACTTAGGTATCTACCTCTTTATGTTTTAAAAAATCAAACCAAAATTTGTATTTGGAAAAAGGTAGCTTTTTACGCTTTATATCAAACCACATACTCCTAAGAAGGATAGAATAGGAGAATCAAATGGTTATCGAAGATTGCCTAAATGTTTCAATTTATATACAAACAACCCTTGCAATCTGGATACTGCTATTTTTTCATTCTACCTTTTCTATCTTGTTCATGTGTCTTTTCTAACAGTCGGAGAAGCTTGCCACGCTTGTGAATACTGCTAAAGTGCAGAATGTGGAGTCTTATTGGTTCAGCCTTTTTGCTAAACTAGCAGAGAAGCGTAACATTGGTGATTTGATCATGAATGTTGGGGCTGGTGGAGGTGCCCCAGTTGCCGCCGCTGTCCCAGCCGGTGGGGCTTCTGGTGGGGCTGCTGCAGCTGCTCCTCCTCCTGAAGAGAAAAAGGTATAGCAATCGAGCTATTTCAATTCTAAGATTGGTATCCCGCTGTCTTTCCTGGCTTGTATGCCTGGTTTTGTGGCACTTCATATATCTACATTATTGATTGTGATATGCTATTACTTATCTTGTTTGCAGGAAGAACCTAAGGAGGAGAGTGACGATGATATGGGATTCAGTTTGTTTGATTAGGTCCATATGGCTTTGCATATTTTGAACTTCGATTATCCTTGAAAAGCCAGAGAGCTCTAGTTATTTTATAAACATGTAATTGGAATATCCATCCGTGACAAAAAATTTCCAGAAGTTTTGATTTGAATTTGATTGCTTGTTTTCTGTTGAGATATATTTTGTTCTATATATCTTATGTTCAATCAGTATTCTAGGTATATCACGTTGTTGACGATTGTTGCTTTTATGTGTTTGTTCGCTATTTAAGCAAACTCCAGTATTCTAGCTACACTTTTTGATGTTTTTTTGTAGTTCTTCTGAACCTCACTTTTCTTCCTAAAGAGATAGGATGAGATTGTGAAGAAGAAAACTCTTTGATCAGTAGAAATCAAGTTCTTATATGCCTACATTGAAATGAAGAATTGAAAAGATTGAAAGTTGCTAAGAAATCTCCTCCTGTTACTG CGCTTCTGTGTTGCGCCGAAGATTGTTTAGAGCTTCCGCCATCGCCCAATTCTTCTGTGAACAATGTCGATCGGAGAACTTGCTTGCTCCTATGCTGCCATGATTCTCTACGACGACAACATCTCTATTACTTCGGAGAAGCTTGCCACGCTTGTGAATACTGCTAAAGTGCAGAATGTGGAGTCTTATTGGTTCAGCCTTTTTGCTAAACTAGCAGAGAAGCGTAACATTGGTGATTTGATCATGAATGTTGGGGCTGGTGGAGGTGCCCCAGTTGCCGCCGCTGTCCCAGCCGGTGGGGCTTCTGGTGGGGCTGCTGCAGCTGCTCCTCCTCCTGAAGAGAAAAAGGAAGAACCTAAGGAGGAGAGTGACGATGATATGGGATTCAGTTTGTTTGATTAGGTCCATATGGCTTTGCATATTTTGAACTTCGATTATCCTTGAAAAGCCAGAGAGCTCTAGTTATTTTATAAACATGTAATTGGAATATCCATCCGTGACAAAAAATTTCCAGAAGTTTTGATTTGAATTTGATTGCTTGTTTTCTGTTGAGATATATTTTGTTCTATATATCTTATGTTCAATCAGTATTCTAGGTATATCACGTTGTTGACGATTGTTGCTTTTATGTGTTTGTTCGCTATTTAAGCAAACTCCAGTATTCTAGCTACACTTTTTGATGTTTTTTTGTAGTTCTTCTGAACCTCACTTTTCTTCCTAAAGAGATAGGATGAGATTGTGAAGAAGAAAACTCTTTGATCAGTAGAAATCAAGTTCTTATATGCCTACATTGAAATGAAGAATTGAAAAGATTGAAAGTTGCTAAGAAATCTCCTCCTGTTACTG ATGTCGATCGGAGAACTTGCTTGCTCCTATGCTGCCATGATTCTCTACGACGACAACATCTCTATTACTTCGGAGAAGCTTGCCACGCTTGTGAATACTGCTAAAGTGCAGAATGTGGAGTCTTATTGGTTCAGCCTTTTTGCTAAACTAGCAGAGAAGCGTAACATTGGTGATTTGATCATGAATGTTGGGGCTGGTGGAGGTGCCCCAGTTGCCGCCGCTGTCCCAGCCGGTGGGGCTTCTGGTGGGGCTGCTGCAGCTGCTCCTCCTCCTGAAGAGAAAAAGGAAGAACCTAAGGAGGAGAGTGACGATGATATGGGATTCAGTTTGTTTGATTAG MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD Homology
BLAST of Sed0024606 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa]) HSP 1 Score: 180.3 bits (456), Expect = 9.5e-42 Identity = 97/113 (85.84%), Postives = 105/113 (92.92%), Query Frame = 0
BLAST of Sed0024606 vs. NCBI nr
Match: KAG6597015.1 (60S acidic ribosomal protein P1-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0024606 vs. NCBI nr
Match: XP_022951343.1 (60S acidic ribosomal protein P1-like [Cucurbita moschata] >KAG7028491.1 60S acidic ribosomal protein P1-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0024606 vs. NCBI nr
Match: XP_022974253.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_023538866.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0024606 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus]) HSP 1 Score: 177.2 bits (448), Expect = 8.0e-41 Identity = 95/113 (84.07%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 9.3e-32 Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-31 Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 1.1e-29 Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2) HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29 Identity = 76/113 (67.26%), Postives = 90/113 (79.65%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy Swiss-Prot
Match: Q9HGV0 (60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G06830 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 9.3e-24 Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy TrEMBL
Match: A0A5D3DB57 (60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00330 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42 Identity = 97/113 (85.84%), Postives = 105/113 (92.92%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy TrEMBL
Match: A0A1S3AUG9 (60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42 Identity = 97/113 (85.84%), Postives = 105/113 (92.92%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy TrEMBL
Match: A0A6J1GHG1 (60S acidic ribosomal protein P1-like OS=Cucurbita moschata OX=3662 GN=LOC111454200 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.0e-42 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy TrEMBL
Match: A0A6J1ICK4 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.8e-42 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Sed0024606 vs. ExPASy TrEMBL
Match: A0A0A0L5M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.9e-41 Identity = 95/113 (84.07%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Sed0024606 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family ) HSP 1 Score: 135.6 bits (340), Expect = 2.5e-32 Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Sed0024606 vs. TAIR 10
Match: AT4G00810.2 (60S acidic ribosomal protein family ) HSP 1 Score: 135.6 bits (340), Expect = 2.5e-32 Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Sed0024606 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family ) HSP 1 Score: 130.6 bits (327), Expect = 8.0e-31 Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Sed0024606 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family ) HSP 1 Score: 130.6 bits (327), Expect = 8.0e-31 Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Sed0024606 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family ) HSP 1 Score: 129.0 bits (323), Expect = 2.3e-30 Identity = 76/113 (67.26%), Postives = 90/113 (79.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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