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Sed0024601 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAATTGCTTCTGATGTGGCTTCATCAACCATAAGAAGCAGTGGAACAATGGAAGAAATGTTGAGAAACATGTGGTTGCCAAATGAAGATTTTCATATGAATTTTAATGAAATTTCAAGTTCAAGCTCAGCCATTGCTTTTCAAAATAATGCCAACAAATGGCATGATGATTATTTGAATTTTCACATTGGCTCATCCATGGAACCTAGCTTTGCCTCTTCAATGGAATCACCTGGTTTGTACTCTTCTATGTTTCTCCTAATTTTTCATCTAAATTGTATTTTGGGGTGTTTGTGAAAATGTAATTATAATTATTAAAATTAAATTTTATAAATTTAAAAAAACCCACAGGTTGAATAGTAGCCATTTGGATTTAGGAAACTTGCCCCAAACAAGAGTTGAACTTAATCTTAATATATATCATCATTGACAATATCATTGAGATAATTTTTTTTTAAAGATTGATTCAAGATAAGCAGGTTCTATTTTTATGAATCTCAATCAATTTCTTGGTATTATTTTTTTTGAGATTACAACAATTGGGGGTGGGGGAGACTCGAACCTAAGACCTCTAAGTCATTAGGTGTACATTGATGCCTATTAAGCTACTACTCTATTGGCAATTTCTTGGTATTGTTCACAAGATAATGTAGACATCTATCTAAAAACCATTCGGTTATGAGAGTAGTCTACATTTCTTATATATTGTTATGAAATCTCCATTCTTTTCGATGAGGAATCTTCTTCAAGATGATGTTTCTTTTGGAATTCACCATTCTTGAATCAAATCTCAATTTCATTTAGACCAAAATCCCATTTGGATATTAATGAGCTCTGATACCATATTAGATTAGTGTGGAATTCCATTTCAAAATTAATTGGATATGAGAGAACTAGTCTACCTTTCTTATAATTTTTTGGATGTAGGATCTTAATTGATTAGTCATACGTAAAGATGAGAGAAGTTGAACACGTGACATTTTGTACCAAAACAAATAGGTCACCAAATTTGTTACATAGGTTTAGTGTCATTGTAGAGAATCCATGCCCTGTTTTTTTCCCTCCTCCAAGTAAATATAAGTTCGACACTTACTAACGGTTAACTTCATTCTCTTATAAAAATTACATCTATTTGAAACAATATATTTTTTTTTATGTCAACAAAAACTAAGCTCAACTTTATATGATATATGATTCTAATAATCGAGAGATTTACAAGTTCGATTCTTTGAGAATAGTTTGTCATCATGCCTGCATCTATACGTTGTTGTAGCATATACTCTTTGATTTTCTTTTGCTTGAAACTAATTTGCTATTTCTTTACCAAAAAATGAAAAGGAAAACTTTATTGTTATAATAATAATTATTATTTTGTTTGTTTTATGAGTAATTGCCTTCTAATTGCAAGAACCTTTGTAGGGTCATCATCAGGTTATCAAAACATGATGAGTTCTGAAATTACTGATTTGGACAAGGAAGCCAAAAAATTATCTCATGATCATCAAGTGAAGCAGCTTGAAGAGAGTTGTGTCATTGTGGATTATAGTACTCCCCATGATGATGTCTCTTGTGAAGCCCAAAAGCATCCTTCATTTAAGGTAACTCTTGAGGATATTATTATTTGAGAATGATTTAAAAAAATGTGCCATTATTTTTATGAGAAATACTTCCCAAGGAGGGGTGTCACAAAATTGTTACTTTTTGCCTTAAAATTGCTTAAAAAAAAAAAATTTGTGACACCAAATGATGCCACCTGTATCCTTAAGGAGGGGACCCTCCTTATTGGAGGAAAGTATTTCTCTATTTTTATATTGAGATTATATATACACACACACATGGATATAGGCACTCAATAGGCATGATACTACCTAACCCTCTTTTTTGAAATATATATGAAAAAAAGTAAACTATCAACCTTTTAAGATAATAATAACTGCTTTATTTACTAAACTATGCTTCAATGGCCCAAAGTAAACTATGCTTCAATGACCCAATAAAAAGAAAACTCAAGTGGCACTTTATATGACCTAATAATCGAGAGGTTATGAATTCAGTCTTCTCATCCTATATAGACATTATATAATAATAAAAAAAGAAGCTAGCTACAACATAGAGATATTTTTCTAAACGATTGCCGAGTCTTGTAAAAGTGAATATTAGTTATGTTTATTTTTCTACATAAAAAGTATTATTATTTTTAAATAAGATGAGATTTTCAAGATTGAAATCATGCCATGAAATTGAATTGAATTACAACCAATTAATTATAAGTGAACACACCACCAATGACCACCGTTTATACACTTCCATGCTTAAAATAAAAGGTTGAACTCTCAAAATTTTACTATATATATATTAAGGTTTTTAAAAAAATTTCTTTTTTCATTATATTTAAAACAAAAACAAGAGTTCTAAATGTTCAATCATTTTTGGACATGATCACTAGACGCTCAATACTTGTTAGTTTAATCAATGCATATCTAGACAAATGTTTAAGACAACTTGTGATAATGTACTAACTTGTGTAATATGTTCTTTAACTTAAAAACTGATCGAATAGAAAAATTAATTGTTATTGATCAATAAATTAACTTCCTTTTTAAGGTGTTAACCACCTGTAGGATAGATTCAAAATTTTGAGATTACGACAATTGGGAGTGAGGGGATTTGAACTCAAGACCTCTTGGTCTTAAGTGTACACTAATATCGTTGAGCAATTGCTTTTGTTGGCTCATGTATCTCTTTCAAAATCTCATTGAAATATCCTAATTTCTACTCTCTCTGTTATTTATTTGTTTTTTTATAATTGAAACAGGAAAAGATCTTGACTGCTTTGTCTTCCAAAAAAAGGTTGGAAGGGGAGTACAAAGAGCTAGCTATTTGGCACAGAGAAAATAAAACAAAGTGTTTCCAAGGAAGAAGTTTGTGTGATCCAACCACAATGCTTTTGAGGGATTCTCAGACAATTCATTCAAATGGTTCTGAATGGGAGCTAATTTAA ATGCCAATTGCTTCTGATGTGGCTTCATCAACCATAAGAAGCAGTGGAACAATGGAAGAAATGTTGAGAAACATGTGGTTGCCAAATGAAGATTTTCATATGAATTTTAATGAAATTTCAAGTTCAAGCTCAGCCATTGCTTTTCAAAATAATGCCAACAAATGGCATGATGATTATTTGAATTTTCACATTGGCTCATCCATGGAACCTAGCTTTGCCTCTTCAATGGAATCACCTGGGTCATCATCAGGTTATCAAAACATGATGAGTTCTGAAATTACTGATTTGGACAAGGAAGCCAAAAAATTATCTCATGATCATCAAGTGAAGCAGCTTGAAGAGAGTTGTGTCATTGTGGATTATAGTACTCCCCATGATGATGTCTCTTGTGAAGCCCAAAAGCATCCTTCATTTAAGGAAAAGATCTTGACTGCTTTGTCTTCCAAAAAAAGGTTGGAAGGGGAGTACAAAGAGCTAGCTATTTGGCACAGAGAAAATAAAACAAAGTGTTTCCAAGGAAGAAGTTTGTGTGATCCAACCACAATGCTTTTGAGGGATTCTCAGACAATTCATTCAAATGGTTCTGAATGGGAGCTAATTTAA ATGCCAATTGCTTCTGATGTGGCTTCATCAACCATAAGAAGCAGTGGAACAATGGAAGAAATGTTGAGAAACATGTGGTTGCCAAATGAAGATTTTCATATGAATTTTAATGAAATTTCAAGTTCAAGCTCAGCCATTGCTTTTCAAAATAATGCCAACAAATGGCATGATGATTATTTGAATTTTCACATTGGCTCATCCATGGAACCTAGCTTTGCCTCTTCAATGGAATCACCTGGGTCATCATCAGGTTATCAAAACATGATGAGTTCTGAAATTACTGATTTGGACAAGGAAGCCAAAAAATTATCTCATGATCATCAAGTGAAGCAGCTTGAAGAGAGTTGTGTCATTGTGGATTATAGTACTCCCCATGATGATGTCTCTTGTGAAGCCCAAAAGCATCCTTCATTTAAGGAAAAGATCTTGACTGCTTTGTCTTCCAAAAAAAGGTTGGAAGGGGAGTACAAAGAGCTAGCTATTTGGCACAGAGAAAATAAAACAAAGTGTTTCCAAGGAAGAAGTTTGTGTGATCCAACCACAATGCTTTTGAGGGATTCTCAGACAATTCATTCAAATGGTTCTGAATGGGAGCTAATTTAA MPIASDVASSTIRSSGTMEEMLRNMWLPNEDFHMNFNEISSSSSAIAFQNNANKWHDDYLNFHIGSSMEPSFASSMESPGSSSGYQNMMSSEITDLDKEAKKLSHDHQVKQLEESCVIVDYSTPHDDVSCEAQKHPSFKEKILTALSSKKRLEGEYKELAIWHRENKTKCFQGRSLCDPTTMLLRDSQTIHSNGSEWELI Homology
BLAST of Sed0024601 vs. NCBI nr
Match: TYK19574.1 (uncharacterized protein E5676_scaffold416G00800 [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 4.3e-21 Identity = 66/111 (59.46%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Sed0024601 vs. NCBI nr
Match: KAA0059021.1 (uncharacterized protein E6C27_scaffold233G00420 [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 4.3e-21 Identity = 66/111 (59.46%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Sed0024601 vs. NCBI nr
Match: XP_011654345.1 (uncharacterized protein LOC105435348 [Cucumis sativus] >KGN53593.1 hypothetical protein Csa_014797 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 6.3e-20 Identity = 79/177 (44.63%), Postives = 102/177 (57.63%), Query Frame = 0
BLAST of Sed0024601 vs. NCBI nr
Match: XP_019464976.1 (PREDICTED: uncharacterized protein LOC109363241 isoform X2 [Lupinus angustifolius]) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-08 Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of Sed0024601 vs. NCBI nr
Match: XP_027355727.1 (uncharacterized protein LOC113865409 [Abrus precatorius] >XP_027355728.1 uncharacterized protein LOC113865409 [Abrus precatorius]) HSP 1 Score: 68.9 bits (167), Expect = 5.5e-08 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of Sed0024601 vs. ExPASy TrEMBL
Match: A0A5D3D7Q1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00800 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.1e-21 Identity = 66/111 (59.46%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Sed0024601 vs. ExPASy TrEMBL
Match: A0A5A7UZW1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00420 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.1e-21 Identity = 66/111 (59.46%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Sed0024601 vs. ExPASy TrEMBL
Match: A0A0A0KVL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083670 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.0e-20 Identity = 79/177 (44.63%), Postives = 102/177 (57.63%), Query Frame = 0
BLAST of Sed0024601 vs. ExPASy TrEMBL
Match: A0A1J7GFJ7 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_22705 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07 Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 0
BLAST of Sed0024601 vs. ExPASy TrEMBL
Match: A0A540KQ51 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_038120 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07 Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = 0
BLAST of Sed0024601 vs. TAIR 10
Match: AT1G17780.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16575.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 7.9e-05 Identity = 27/68 (39.71%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Sed0024601 vs. TAIR 10
Match: AT2G16575.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17780.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04 Identity = 28/70 (40.00%), Postives = 39/70 (55.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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