Homology
BLAST of Sed0024568 vs. NCBI nr
Match:
KAG6578890.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 744.2 bits (1920), Expect = 6.2e-211
Identity = 365/419 (87.11%), Postives = 390/419 (93.08%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
MLFEVL+K RHW PRLSSPY+ K RNFSLWSMKKDPDLE ALSRNRRWIVNNQIKNI+
Sbjct: 1 MLFEVLQKSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIV 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CPNQTAPVKFLQKKFKTLD +GKALNWLKKYP CFEVYL NDE+YFRLTKRMMALVEE
Sbjct: 61 LRCPNQTAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHNDEYYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE +KDMQEP FVERLAKLLMMASNQRLNV+KLGEL+R FGLPDDYLIR+VPKHSDMFRI
Sbjct: 121 EETIKDMQEPAFVERLAKLLMMASNQRLNVLKLGELKRIFGLPDDYLIRIVPKHSDMFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G+RNSMEIEL+SWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKF+EFN+S
Sbjct: 181 VNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PYISPY N GLV +T MEKRTVGLIHEILSLTLWKK SIMKLGHFSREFGLP KLN L
Sbjct: 241 PYISPYANHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT+LLREGYNGSELIEKDPLVVVK+KFGELMQEGLHEYN+RHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNRRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR+EKNKRKD E +D DD+GNN LGGLLEPEERKRFYQ+LF DG+A
Sbjct: 361 MNLEKKRMKGMLLGRSEKNKRKDSEPDDLDDQGNN-LGGLLEPEERKRFYQSLFDDGSA 418
BLAST of Sed0024568 vs. NCBI nr
Match:
XP_023551426.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 744.2 bits (1920), Expect = 6.2e-211
Identity = 365/419 (87.11%), Postives = 389/419 (92.84%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
MLFEVL+K RHW PRLSSPY K RNFSLWSMKKDPDLE ALSRNRRWIVNNQIKNI+
Sbjct: 1 MLFEVLQKSRHWDPRLSSPYCLKCFPRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIV 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CPNQTAPVKFLQKKFKTLD +GKALNWLKKYP CFEVYL NDE+YFRLTKRMMALVEE
Sbjct: 61 LRCPNQTAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHNDEYYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE VKDMQEP FVERLAKLLMMASNQRLNV+KLGELRRNFGLPDDYLIR+VPKHSDMFRI
Sbjct: 121 EETVKDMQEPAFVERLAKLLMMASNQRLNVLKLGELRRNFGLPDDYLIRIVPKHSDMFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G+RNSMEIEL+SWKPELAIS+IESSACK GVEP FSCSLPTTWV+SWEKF+EFN+S
Sbjct: 181 VNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPTFSCSLPTTWVHSWEKFHEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PYISPY N GLV +T MEKRTVGLIHEILSLTLWKK SIMKLGHFSREFGLP KLN L
Sbjct: 241 PYISPYANHAGLVKDTNEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT+LLREGY+GSELIEKDPLVVVK+KFGELMQEGLHEYN+RHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVLLREGYSGSELIEKDPLVVVKEKFGELMQEGLHEYNRRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR+EKNKRKD E +D DD+GNN LGGLLEPEERKRFYQ+LF DG+A
Sbjct: 361 MNLEKKRMKGMLLGRSEKNKRKDSEPDDLDDQGNN-LGGLLEPEERKRFYQSLFDDGSA 418
BLAST of Sed0024568 vs. NCBI nr
Match:
XP_022939501.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])
HSP 1 Score: 743.4 bits (1918), Expect = 1.1e-210
Identity = 365/419 (87.11%), Postives = 389/419 (92.84%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
MLFEVL K RHW PRLSSPY+ K RNFSLWSMKKDPDLE ALSRNRRWIVNNQIKNI+
Sbjct: 1 MLFEVLMKSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIV 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CPNQTAPVKFLQKKFKTLD +GKALNWLKKYP CFEVYL NDE+YFRLTKRMMALVEE
Sbjct: 61 LRCPNQTAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHNDEYYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE +KDMQEP FVERLAKLLMMASNQRLNV+KLGEL+R FGLPDDYLIR+VPKHSDMFRI
Sbjct: 121 EETIKDMQEPAFVERLAKLLMMASNQRLNVLKLGELKRIFGLPDDYLIRIVPKHSDMFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G+RNSMEIEL+SWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKF+EFN+S
Sbjct: 181 VNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PYISPY N GLV +T MEKRTVGLIHEILSLTLWKK SIMKLGHFSREFGLP KLN L
Sbjct: 241 PYISPYANHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT+LLREGYNGSELIEKDPLVVVK+KFGELMQEGLHEYN+RHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNRRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR+EKNKRKD E +D DD+GNN LGGLLEPEERKRFYQ+LF DG+A
Sbjct: 361 MNLEKKRMKGMLLGRSEKNKRKDSEPDDLDDQGNN-LGGLLEPEERKRFYQSLFDDGSA 418
BLAST of Sed0024568 vs. NCBI nr
Match:
XP_022993888.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima] >XP_022993889.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima])
HSP 1 Score: 740.7 bits (1911), Expect = 6.8e-210
Identity = 364/419 (86.87%), Postives = 389/419 (92.84%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
MLFEVL+K RHW PRLSSPY+ K RNFSLWSMKKDPDLE ALSRNRRWIVNNQIKNI+
Sbjct: 1 MLFEVLQKSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIV 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CPNQTAPVKFLQKKFKTLD +GKALNWLKKYP CFEVYL +DE+YFRLTKRMMALVEE
Sbjct: 61 LRCPNQTAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHDDEYYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE VKDMQEP FVERLAKLLMMASNQRLNV+KLGELRRNFGLPDDYLIR+VPKHSDMFRI
Sbjct: 121 EETVKDMQEPAFVERLAKLLMMASNQRLNVLKLGELRRNFGLPDDYLIRIVPKHSDMFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G+RNSMEIEL+SWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKF+EFN+S
Sbjct: 181 VNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PYISPY GLV +T MEKRTVGLIHEILSLTLWKK SIMKLGHFSREFGLP KLN L
Sbjct: 241 PYISPYAIHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT+LLREGYNGSELIEKDPLVVVK++FGELMQEGLHEYN+RHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKERFGELMQEGLHEYNRRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR++KNKRKD E +D DD+GNN LGGLLEPEERKRFYQ LF DG+A
Sbjct: 361 MNLEKKRMKGMLLGRSKKNKRKDFEPDDLDDQGNN-LGGLLEPEERKRFYQYLFDDGSA 418
BLAST of Sed0024568 vs. NCBI nr
Match:
XP_038886354.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886355.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886356.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886357.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])
HSP 1 Score: 732.3 bits (1889), Expect = 2.4e-207
Identity = 358/419 (85.44%), Postives = 385/419 (91.89%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
M ++VL+KLR+W PR SSPY KY RNFSLWSMKKDPDLE ALSRNRRWI NNQIKNII
Sbjct: 1 MSYKVLQKLRYWDPRFSSPYVLKYFLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNII 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CP+Q PVKFLQKKFKTLDL+GKALNWLKKYPCCFEVYL NDE YFRLTKRMMALVEE
Sbjct: 61 LRCPDQATPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDERYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EEAVKDMQEPV V+RLAKLLMMASNQRLNVVKLGEL++NFGL DDYLIR+VPK+SDMFRI
Sbjct: 121 EEAVKDMQEPVVVKRLAKLLMMASNQRLNVVKLGELKQNFGLSDDYLIRIVPKYSDMFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G++NSMEIELISWKPELAIS IESSACK GVEPAFSCSLPTTWVNSWEKF+EFN+S
Sbjct: 181 VNYTGKKNSMEIELISWKPELAISNIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PY+SPYENP GLV T MEKR VGLIHEILSLTLWKK SI+KLGHFSREFGLP KLN L
Sbjct: 241 PYVSPYENPAGLVQGTKEMEKRIVGLIHEILSLTLWKKASIIKLGHFSREFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT++LREGYNGS+LIEKDPLVVVK+KFGELMQEGLHEYNKRHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVVLREGYNGSKLIEKDPLVVVKEKFGELMQEGLHEYNKRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR+EKNKRKD E +D D +GNN LGGLLEPEERKRFYQ+LF DG A
Sbjct: 361 MNLEKKRMKGMLLGRSEKNKRKDFEPDDPDGQGNN-LGGLLEPEERKRFYQSLFDDGLA 418
BLAST of Sed0024568 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 1.4e-35
Identity = 105/332 (31.63%), Postives = 174/332 (52.41%), Query Frame = 0
Query: 35 KKDPDLELALSRNRRWIVNNQIKNIILHCPNQTAPVKFLQKKFKTLDL--RGKALNWLKK 94
+K+ + + R+++ + I+ I++ P++ ++ L K + L L R + + L+K
Sbjct: 79 RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138
Query: 95 YPCCFEVYLQNDEHY-FRLTKRMMALVEEEEAVKDMQEPVFVERLAKLLMMASNQRLNVV 154
YP FE+ + F++T L +E +++ E V V +L KL+MM+ ++R+ +
Sbjct: 139 YPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLE 198
Query: 155 KLGELRRNFGLPDDYLIRVVPKHSDMFRIVNYSGRRNSMEIELISWKPELAIS------- 214
K+ L+ + GLP ++ + ++ FR+V +EL W PELA+S
Sbjct: 199 KISHLKTDLGLPLEFRDTICQRYPQYFRVV---PTPRGPALELTHWDPELAVSAAELSED 258
Query: 215 ---TIESSACKLGVE--PAFS-CSLP---TTWVNSWEKFNEFNSSPYISPYENPGGLVHN 274
T ES L ++ P F+ LP + K ++F YISPY++ L
Sbjct: 259 DNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSG 318
Query: 275 TTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVSNKYQ 334
T EK G+IHE+LSLT K+T + L HF EF +L G+L++HP +FYVS K +
Sbjct: 319 TLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGE 378
Query: 335 IYTLLLREGYNGSELIEKDPLVVVKDKFGELM 348
++ LRE Y SELI+KDPL +VK+K L+
Sbjct: 379 RDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407
BLAST of Sed0024568 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 1.7e-33
Identity = 100/335 (29.85%), Postives = 170/335 (50.75%), Query Frame = 0
Query: 35 KKDPDLELALSRNRRWIVNNQIKNIILHCPNQTAPVKFLQKKFKTLDL--RGKALNWLKK 94
+K+ + + R+++ + +++NI++ P++ ++ L + + L L + + + LK+
Sbjct: 64 RKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKR 123
Query: 95 YPCCFEVYLQNDEHY-FRLTKRMMALVEEEEAVKDMQEPVFVERLAKLLMMASNQRLNVV 154
+P FEV + FRLT L +E +K+ E + V +L KLLMM+ ++R+ +
Sbjct: 124 FPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRILIE 183
Query: 155 KLGELRRNFGLPDDYLIRVVPKHSDMFRIVNYSGRRNSMEIELISWKPELAISTIESSAC 214
K+ L+ + GLP ++ + ++ FR+V +EL W PELA+S E +
Sbjct: 184 KIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMD---RGPGLELTHWDPELAVSAAEVAEE 243
Query: 215 KLGVEPAFSCSLPTTWVNSWEKFN-------------------EFNSSPYISPYENPGGL 274
+ +L ++ KFN +F PYISPY + L
Sbjct: 244 ENRAREEQERNL---IIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHL 303
Query: 275 VHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVSN 334
+ EK G++HEILSLTL K+T + L HF EF L G+L++HP +FYVS
Sbjct: 304 RSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSL 363
Query: 335 KYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELM 348
K ++ LRE Y S+L+EK LV++K+K L+
Sbjct: 364 KGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALV 392
BLAST of Sed0024568 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 1.4e-32
Identity = 97/335 (28.96%), Postives = 170/335 (50.75%), Query Frame = 0
Query: 35 KKDPDLELALSRNRRWIVNNQIKNIILHCPNQTAPVKFLQKKFKTLDL--RGKALNWLKK 94
+K+ + + R+++ + +++NI++ P++ ++ L + + L L + + + L++
Sbjct: 58 RKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRR 117
Query: 95 YPCCFEVYLQNDEHY-FRLTKRMMALVEEEEAVKDMQEPVFVERLAKLLMMASNQRLNVV 154
+P F+V + FRLT L +E +++ E + V +L KLLMM+ +R+ +
Sbjct: 118 FPGVFDVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRILIE 177
Query: 155 KLGELRRNFGLPDDYLIRVVPKHSDMFRIVNYSGRRNSMEIELISWKPELAISTIESSAC 214
K+ L+ + GLP ++ V ++ FR+V +EL W PELA+S E +
Sbjct: 178 KVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMD---RGPALELTHWDPELAVSAAELAEE 237
Query: 215 KLGVEPAFSCSLPTTWVNSWEKFN-------------------EFNSSPYISPYENPGGL 274
+ A +L ++ KFN F PYISPY + L
Sbjct: 238 ESRAREAEERNL---IIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHL 297
Query: 275 VHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVSN 334
+ EK G++HEILSLT+ K+T + L HF EF L G++++HP +FYVS
Sbjct: 298 RSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSF 357
Query: 335 KYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELM 348
K ++ LRE Y S+L+EK+ LV++K+K L+
Sbjct: 358 KGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALV 386
BLAST of Sed0024568 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 9.1e-32
Identity = 104/321 (32.40%), Postives = 160/321 (49.84%), Query Frame = 0
Query: 58 NIILHCPNQTAPVKFLQKKFKTLDLRGKALN---WLKKYPCCFEVYLQNDEH--YFRLTK 117
++IL PN T + L + L L K +L K+P FE+Y + Y RLT+
Sbjct: 70 SLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTR 129
Query: 118 RMMALV-EEEEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVV 177
+ + + E EAV D Q P V RL KL+MM++ R+ + + R FGLP+D+ V+
Sbjct: 130 KALDQIRHEHEAVLD-QIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVI 189
Query: 178 PKHSDMFRIVNYSGRRNSMEIELISWKPELAISTIE---------SSACKLGVEPAFSCS 237
KH FR+++ R+ IE++ P L+I IE V +F +
Sbjct: 190 LKHPQFFRLIDGEETRDKY-IEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVN 249
Query: 238 LPTTW---------VNSWEKFNEFNSSPYISPYENPGGL----VHNTTAMEKRTVGLIHE 297
P + V W++ PY SPYE+ G + +EKR+V IHE
Sbjct: 250 FPPGFKIGKYFRIAVWKWQRL------PYWSPYEDISGYDLRSMEAQNRLEKRSVACIHE 309
Query: 298 ILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVS---NKYQIYTLLLREGYN 348
+LSLT+ KK ++ ++ HF LP KL LL+H GIFY+S N +++T+ LREGY
Sbjct: 310 LLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYK 369
BLAST of Sed0024568 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 4.7e-28
Identity = 87/307 (28.34%), Postives = 147/307 (47.88%), Query Frame = 0
Query: 56 IKNIILHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEH--YFRLTKR 115
+KN I+ PN+ P+ + KK + D+ K ++L+K+P FE ++ + + +FRLT
Sbjct: 55 LKNCIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPE 114
Query: 116 MMALVEEEEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPK 175
L +E V +RL KL++M+ + L + + ++ GLPDDYL
Sbjct: 115 ATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMN 174
Query: 176 HSDMFRIVNYSGRRNSMEIELISWKPELAISTIESSACK------------LGVEPAFSC 235
FR V+ + ++ + +S ++ +A K + P+ C
Sbjct: 175 LDSSFRFVDMEDGVKGLAVDYNG--GDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGC 234
Query: 236 SLPTTWVNSWEKFNEFNSSPYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSI 295
L + W EF PY+SPY++ L ++ EKR VG +HE+L L +
Sbjct: 235 RLRVK-IEDW--LMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAER 294
Query: 296 MKLGHFSREFGLPSKLNGLLLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKD 349
KL + FGLP K++ +HP IFY+S K + T +LRE Y +E P++ V+
Sbjct: 295 KKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRK 354
BLAST of Sed0024568 vs. ExPASy TrEMBL
Match:
A0A6J1FG34 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111445385 PE=4 SV=1)
HSP 1 Score: 743.4 bits (1918), Expect = 5.1e-211
Identity = 365/419 (87.11%), Postives = 389/419 (92.84%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
MLFEVL K RHW PRLSSPY+ K RNFSLWSMKKDPDLE ALSRNRRWIVNNQIKNI+
Sbjct: 1 MLFEVLMKSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIV 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CPNQTAPVKFLQKKFKTLD +GKALNWLKKYP CFEVYL NDE+YFRLTKRMMALVEE
Sbjct: 61 LRCPNQTAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHNDEYYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE +KDMQEP FVERLAKLLMMASNQRLNV+KLGEL+R FGLPDDYLIR+VPKHSDMFRI
Sbjct: 121 EETIKDMQEPAFVERLAKLLMMASNQRLNVLKLGELKRIFGLPDDYLIRIVPKHSDMFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G+RNSMEIEL+SWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKF+EFN+S
Sbjct: 181 VNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PYISPY N GLV +T MEKRTVGLIHEILSLTLWKK SIMKLGHFSREFGLP KLN L
Sbjct: 241 PYISPYANHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT+LLREGYNGSELIEKDPLVVVK+KFGELMQEGLHEYN+RHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNRRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR+EKNKRKD E +D DD+GNN LGGLLEPEERKRFYQ+LF DG+A
Sbjct: 361 MNLEKKRMKGMLLGRSEKNKRKDSEPDDLDDQGNN-LGGLLEPEERKRFYQSLFDDGSA 418
BLAST of Sed0024568 vs. ExPASy TrEMBL
Match:
A0A6J1K3L2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111489755 PE=4 SV=1)
HSP 1 Score: 740.7 bits (1911), Expect = 3.3e-210
Identity = 364/419 (86.87%), Postives = 389/419 (92.84%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
MLFEVL+K RHW PRLSSPY+ K RNFSLWSMKKDPDLE ALSRNRRWIVNNQIKNI+
Sbjct: 1 MLFEVLQKSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIV 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CPNQTAPVKFLQKKFKTLD +GKALNWLKKYP CFEVYL +DE+YFRLTKRMMALVEE
Sbjct: 61 LRCPNQTAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHDDEYYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE VKDMQEP FVERLAKLLMMASNQRLNV+KLGELRRNFGLPDDYLIR+VPKHSDMFRI
Sbjct: 121 EETVKDMQEPAFVERLAKLLMMASNQRLNVLKLGELRRNFGLPDDYLIRIVPKHSDMFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G+RNSMEIEL+SWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKF+EFN+S
Sbjct: 181 VNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PYISPY GLV +T MEKRTVGLIHEILSLTLWKK SIMKLGHFSREFGLP KLN L
Sbjct: 241 PYISPYAIHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT+LLREGYNGSELIEKDPLVVVK++FGELMQEGLHEYN+RHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKERFGELMQEGLHEYNRRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR++KNKRKD E +D DD+GNN LGGLLEPEERKRFYQ LF DG+A
Sbjct: 361 MNLEKKRMKGMLLGRSKKNKRKDFEPDDLDDQGNN-LGGLLEPEERKRFYQYLFDDGSA 418
BLAST of Sed0024568 vs. ExPASy TrEMBL
Match:
A0A5D3DGZ3 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00680 PE=4 SV=1)
HSP 1 Score: 732.3 bits (1889), Expect = 1.2e-207
Identity = 356/419 (84.96%), Postives = 386/419 (92.12%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
ML++VL+K R+W P LSSP KY RNFSLWSMKKDPDLE ALSRNRRWI NNQIKNII
Sbjct: 1 MLYKVLQKSRYWDPGLSSPCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNII 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CP+Q APVKFLQKKFKTLDL+GKALNWLKKYPCCFEVYL NDEHYFRLTKRMMALVEE
Sbjct: 61 LRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLNNDEHYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE VKDMQEP V+RL KLLMMASNQRLNV+KL ELRRNFGLPDD+LIR++PKHSD+FRI
Sbjct: 121 EEVVKDMQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPKHSDIFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G++NSMEIELISWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKFNEFN+S
Sbjct: 181 VNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PY+SPY NP GLV T MEKRTVGLIHEILSLTLWKK SI+KLGHFS+EFGLP KLN L
Sbjct: 241 PYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT++LREGYNGSELIEKDPLVVVK+KFGELMQEGLHEYNKRHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKGM+LGR+EKNKRKD ET+D++ +GNN LGGLLEPEERKRFYQ+LF DG A
Sbjct: 361 MNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNN-LGGLLEPEERKRFYQSLFDDGPA 418
BLAST of Sed0024568 vs. ExPASy TrEMBL
Match:
A0A0A0KEF0 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057120 PE=4 SV=1)
HSP 1 Score: 728.8 bits (1880), Expect = 1.3e-206
Identity = 354/416 (85.10%), Postives = 384/416 (92.31%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
ML++VL+K R+W P LSSP KY RNFSLWSMKKDPDLE ALSRNRRWI NNQIKNII
Sbjct: 1 MLYKVLQKSRYWDPGLSSPCPLKYILRNFSLWSMKKDPDLESALSRNRRWIANNQIKNII 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CP+Q APVKFLQKKFKTLDL+GKALNWLKKYPCCFEVYL NDEHYFRLTKRMMALVEE
Sbjct: 61 LRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLDNDEHYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE VKDMQEP V+RL KLLMMASNQRLNVVKL ELRRNFGLPDD+LIR++PKHSD+FRI
Sbjct: 121 EEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDIFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G++NSMEIELISWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKFNEFN+S
Sbjct: 181 VNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PY+SPY NP GLV T MEKRTVGLIHEILSLTLWKK SI+KLGHF++EFGLP KLN L
Sbjct: 241 PYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT++LREGYNGSELIEKDPLVVVK+KFGELMQEGLHEYNKRHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGD 417
MNLEKKRMKGM+LGR+EKNKRKD ET+D++ +GNN LGGLLEPEERKRFYQ+LF D
Sbjct: 361 MNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNN-LGGLLEPEERKRFYQSLFDD 415
BLAST of Sed0024568 vs. ExPASy TrEMBL
Match:
A0A1S4DTX7 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103485622 PE=4 SV=1)
HSP 1 Score: 723.8 bits (1867), Expect = 4.2e-205
Identity = 352/419 (84.01%), Postives = 381/419 (90.93%), Query Frame = 0
Query: 1 MLFEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNII 60
ML++VL+K R+W P LSSP KY RNFSLWSMKKDPDLE ALSRNRRWI NNQIKNII
Sbjct: 1 MLYKVLQKSRYWDPGLSSPCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNII 60
Query: 61 LHCPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEE 120
L CP+Q APVKFLQKKFKTLDL+GKALNWLKKYPCCFEVYL NDEHYFRLTKRMMALVEE
Sbjct: 61 LRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLNNDEHYFRLTKRMMALVEE 120
Query: 121 EEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRI 180
EE VKDMQEP V+RL KLLMMASNQRLNV+KL ELRRNFGLPDD+LIR++PKHSD+FRI
Sbjct: 121 EEVVKDMQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPKHSDIFRI 180
Query: 181 VNYSGRRNSMEIELISWKPELAISTIESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSS 240
VNY+G++NSMEIELISWKPELAIS+IESSACK GVEPAFSCSLPTTWVNSWEKFNEFN+S
Sbjct: 181 VNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNAS 240
Query: 241 PYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGL 300
PY+SPY NP GLV T MEKRTVGLIHEILSLTLWKK SI+KLGHFS+EFGLP KLN L
Sbjct: 241 PYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGLPLKLNAL 300
Query: 301 LLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHL 360
LLKHPGIFYVSNKYQIYT++LREGYNGSELIEKDPLVVVK+KFGELMQEGLHEYNKRHHL
Sbjct: 301 LLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHL 360
Query: 361 MNLEKKRMKGMVLGRTEKNKRKDLETNDTDDKGNNTLGGLLEPEERKRFYQALFGDGAA 420
MNLEKKRMKG G+ KNKRKD ET+D++ +GNN LGGLLEPEERKRFYQ+LF DG A
Sbjct: 361 MNLEKKRMKGXAFGQIRKNKRKDFETDDSNGQGNN-LGGLLEPEERKRFYQSLFDDGPA 418
BLAST of Sed0024568 vs. TAIR 10
Match:
AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 572.0 bits (1473), Expect = 3.9e-163
Identity = 276/393 (70.23%), Postives = 329/393 (83.72%), Query Frame = 0
Query: 27 RNFSLWSMKKDPDLELALSRNRRWIVNNQIKNIILHCPNQTAPVKFLQKKFKTLDLRGKA 86
R FSLWS KKDPDLE ALSRN+RWIVN+++KNIIL CPNQ A +KFLQKKFKTLDL+GKA
Sbjct: 21 RRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKA 80
Query: 87 LNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEEEEAVKDMQEPVFVERLAKLLMMASNQ 146
LNWLKKYPCCF VYL+NDE+Y RLTK MM LVEEEE VKD QEPV +RLAKLLM++ NQ
Sbjct: 81 LNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQ 140
Query: 147 RLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRIVNYSGRRNSMEIELISWKPELAISTI 206
RLNVVKL E +R+FG PDDY+IR+VPK+SD+FR+VNYSGR++SMEIEL+ WKPELA+S +
Sbjct: 141 RLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAV 200
Query: 207 ESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSSPYISPYENPGGLVHNTTAMEKRTVGL 266
E++A K G EP+FSCSLP+TW WE+F EFN+ PYISPYE+ G LV + EKR+VGL
Sbjct: 201 EAAAKKCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEGSKESEKRSVGL 260
Query: 267 IHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVSNKYQIYTLLLREGYN 326
+HE+LSLTLWKK SI+KL HF REFGLP KLNG+LLKHPGIFYV NKYQ++T++LREGYN
Sbjct: 261 VHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREGYN 320
Query: 327 GSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHLMNLEKKRMKGM-VLGRTEKNKRKDLE 386
GSELI KDPLVVVKDKFGELMQ+GL+EYN R +L NLEKKR KG+ L + K ++ +
Sbjct: 321 GSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLKPVVRKKDRNHD 380
Query: 387 TNDTDDKGN--NTLGGLLEPEERKRFYQALFGD 417
+D D++ N + GGL +PEERKRFYQ LF D
Sbjct: 381 RDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413
BLAST of Sed0024568 vs. TAIR 10
Match:
AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 572.0 bits (1473), Expect = 3.9e-163
Identity = 276/393 (70.23%), Postives = 329/393 (83.72%), Query Frame = 0
Query: 27 RNFSLWSMKKDPDLELALSRNRRWIVNNQIKNIILHCPNQTAPVKFLQKKFKTLDLRGKA 86
R FSLWS KKDPDLE ALSRN+RWIVN+++KNIIL CPNQ A +KFLQKKFKTLDL+GKA
Sbjct: 21 RRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKA 80
Query: 87 LNWLKKYPCCFEVYLQNDEHYFRLTKRMMALVEEEEAVKDMQEPVFVERLAKLLMMASNQ 146
LNWLKKYPCCF VYL+NDE+Y RLTK MM LVEEEE VKD QEPV +RLAKLLM++ NQ
Sbjct: 81 LNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQ 140
Query: 147 RLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRIVNYSGRRNSMEIELISWKPELAISTI 206
RLNVVKL E +R+FG PDDY+IR+VPK+SD+FR+VNYSGR++SMEIEL+ WKPELA+S +
Sbjct: 141 RLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAV 200
Query: 207 ESSACKLGVEPAFSCSLPTTWVNSWEKFNEFNSSPYISPYENPGGLVHNTTAMEKRTVGL 266
E++A K G EP+FSCSLP+TW WE+F EFN+ PYISPYE+ G LV + EKR+VGL
Sbjct: 201 EAAAKKCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEGSKESEKRSVGL 260
Query: 267 IHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVSNKYQIYTLLLREGYN 326
+HE+LSLTLWKK SI+KL HF REFGLP KLNG+LLKHPGIFYV NKYQ++T++LREGYN
Sbjct: 261 VHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREGYN 320
Query: 327 GSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHLMNLEKKRMKGM-VLGRTEKNKRKDLE 386
GSELI KDPLVVVKDKFGELMQ+GL+EYN R +L NLEKKR KG+ L + K ++ +
Sbjct: 321 GSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLKPVVRKKDRNHD 380
Query: 387 TNDTDDKGN--NTLGGLLEPEERKRFYQALFGD 417
+D D++ N + GGL +PEERKRFYQ LF D
Sbjct: 381 RDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413
BLAST of Sed0024568 vs. TAIR 10
Match:
AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 209.9 bits (533), Expect = 3.9e-54
Identity = 128/388 (32.99%), Postives = 220/388 (56.70%), Query Frame = 0
Query: 3 FEVLKKLRHWSPRLSSPYAFKYSSRNFSLWSMKKDPDLELALSRNRRWIVNNQIKNIILH 62
+E++K L+H + S ++ S +W KKD L+ A+ +++R+ + ++ +L+
Sbjct: 10 YEIIKSLKH-AKEHSLGIQIRWISSLKVVW--KKDTRLDEAIEQDKRYKLCARVVKEVLN 69
Query: 63 CPNQTAPVKFLQKKFKTLDLRGKALNWLKKYPCCFEVYL------QNDEHYFRLTKRMMA 122
P Q P+++L+K+ + L L KA ++++ P FE+Y + + R T R+ A
Sbjct: 70 EPGQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRA 129
Query: 123 LVEEEEAVKDMQEPVFVERLAKLLMMASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSD 182
++EE+ + EP+ V +L +LLMMA ++ ++ KL ++R+FG P+D+L+++V K+ +
Sbjct: 130 FLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPN 189
Query: 183 MFRIVNYSGRRNSMEIELISWKPELAISTIESSA----CKLGV--EPAFSCSLPTTW--- 242
FR+ S +EL+SW P+ A S IE A K GV P ++ LP+ +
Sbjct: 190 YFRLTGLPEEGKSF-LELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLR 249
Query: 243 --VNSWEKFNEFNSSPYISPYENPGGLVHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLG 302
+ W + ++ YISPYE+ L + MEKRTVG++HE+LSL+L K+ + LG
Sbjct: 250 KEMREWTR--DWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLG 309
Query: 303 HFSREFGLPSKLNGLLLKHPGIFYVSNKYQIYTLLLREGYNGSELIEKDPLVVVKDKFGE 362
F EF + + + +H GIFY+S K I T +LRE Y EL+++DPL+ +KDKF
Sbjct: 310 KFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLR 369
Query: 363 LMQEGLHEYNKRHHLMNLEKKRMKGMVL 374
L++EG E R L + ++ + M+L
Sbjct: 370 LLEEGWQERKDRLKLQREQVQKDREMML 391
BLAST of Sed0024568 vs. TAIR 10
Match:
AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 152.1 bits (383), Expect = 9.6e-37
Identity = 105/332 (31.63%), Postives = 174/332 (52.41%), Query Frame = 0
Query: 35 KKDPDLELALSRNRRWIVNNQIKNIILHCPNQTAPVKFLQKKFKTLDL--RGKALNWLKK 94
+K+ + + R+++ + I+ I++ P++ ++ L K + L L R + + L+K
Sbjct: 79 RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138
Query: 95 YPCCFEVYLQNDEHY-FRLTKRMMALVEEEEAVKDMQEPVFVERLAKLLMMASNQRLNVV 154
YP FE+ + F++T L +E +++ E V V +L KL+MM+ ++R+ +
Sbjct: 139 YPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLE 198
Query: 155 KLGELRRNFGLPDDYLIRVVPKHSDMFRIVNYSGRRNSMEIELISWKPELAIS------- 214
K+ L+ + GLP ++ + ++ FR+V +EL W PELA+S
Sbjct: 199 KISHLKTDLGLPLEFRDTICQRYPQYFRVV---PTPRGPALELTHWDPELAVSAAELSED 258
Query: 215 ---TIESSACKLGVE--PAFS-CSLP---TTWVNSWEKFNEFNSSPYISPYENPGGLVHN 274
T ES L ++ P F+ LP + K ++F YISPY++ L
Sbjct: 259 DNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSG 318
Query: 275 TTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVSNKYQ 334
T EK G+IHE+LSLT K+T + L HF EF +L G+L++HP +FYVS K +
Sbjct: 319 TLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGE 378
Query: 335 IYTLLLREGYNGSELIEKDPLVVVKDKFGELM 348
++ LRE Y SELI+KDPL +VK+K L+
Sbjct: 379 RDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407
BLAST of Sed0024568 vs. TAIR 10
Match:
AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 149.4 bits (376), Expect = 6.3e-36
Identity = 118/405 (29.14%), Postives = 186/405 (45.93%), Query Frame = 0
Query: 36 KDPDLELALSRNRRWIVNNQIKNIILHCPNQTAPVKFLQKKFKTLDLRG--------KAL 95
KD +L+ + R + + ++I P+ P+ FK L RG K
Sbjct: 41 KDRELDAVVVREKHLRAVCNLVSVISASPDLRLPI------FKLLPHRGQLGLPQELKLS 100
Query: 96 NWLKKYPCCFEVYLQNDE-----HYFRLTKRMMALVEEEEAVKDMQEPVFVERLAKLLMM 155
++++YP F + D F LT+ + L EE V + E + RL KLLM+
Sbjct: 101 AFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRLCKLLML 160
Query: 156 ASNQRLNVVKLGELRRNFGLPDDYLIRVVPKHSDMFRIVNYSGRRNSMEIELISWKPELA 215
+ L++ + LR + GLP DY ++ KH D+F +V S + ++LI W LA
Sbjct: 161 TCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG--LKLIHWDEHLA 220
Query: 216 ISTI---------ESSACKLGVEPAFSCSLPT-TWVNSWEKFNEFNSSPYISPYENPGGL 275
+S + E A + F + W+ W++ PY SPY + L
Sbjct: 221 VSQMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRL------PYTSPYVDASHL 280
Query: 276 VHNTTAMEKRTVGLIHEILSLTLWKKTSIMKLGHFSREFGLPSKLNGLLLKHPGIFYVSN 335
T EKR VG+ HE+L LT+ KKT + + + F LP K + +HPGIFY+S
Sbjct: 281 DPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYISM 340
Query: 336 KYQIYTLLLREGYNGSELIEKDPLVVVKDKFGELMQEGLHEYNKRHHLMNLEKKRMKGMV 395
K T++LRE Y+ LIEK PLV V++KF +M EG + ++ + ++E
Sbjct: 341 KCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRSRGLYQKSVE-------- 400
Query: 396 LGRTEKNKRK---DLETNDTDDKGNNTLGGLLEP----EERKRFY 411
EKN K + +++ ++ NN + G EE KR +
Sbjct: 401 -ADLEKNNIKTSYPVWSDEEEELDNNLISGYDSDCPVVEEHKRVF 422
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6578890.1 | 6.2e-211 | 87.11 | Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm... | [more] |
| XP_023551426.1 | 6.2e-211 | 87.11 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022939501.1 | 1.1e-210 | 87.11 | protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] | [more] |
| XP_022993888.1 | 6.8e-210 | 86.87 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima] >XP_022993889.1 protein R... | [more] |
| XP_038886354.1 | 2.4e-207 | 85.44 | protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_0388... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0MFS5 | 1.4e-35 | 31.63 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
| Q65XL5 | 1.7e-33 | 29.85 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
| B6TTV8 | 1.4e-32 | 28.96 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
| Q689D6 | 9.1e-32 | 32.40 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
| Q9ZUZ6 | 4.7e-28 | 28.34 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FG34 | 5.1e-211 | 87.11 | protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114453... | [more] |
| A0A6J1K3L2 | 3.3e-210 | 86.87 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111489755 ... | [more] |
| A0A5D3DGZ3 | 1.2e-207 | 84.96 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
| A0A0A0KEF0 | 1.3e-206 | 85.10 | PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057120 PE=4 S... | [more] |
| A0A1S4DTX7 | 4.2e-205 | 84.01 | LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G31290.1 | 3.9e-163 | 70.23 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT2G31290.2 | 3.9e-163 | 70.23 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT3G63090.1 | 3.9e-54 | 32.99 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT4G01037.1 | 9.6e-37 | 31.63 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT5G48040.1 | 6.3e-36 | 29.14 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
