Sed0024539 (gene) Chayote v1

Overview


Name	Sed0024539
Type	gene
Organism	Sechium edule (Chayote v1)
Description	UBP1-associated protein 2C-like
Location	LG04: 37689237 .. 37700639 (+)
RNA-Seq Expression	Sed0024539
Synteny	Sed0024539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGACGACCGGCATTTACCAATCGGCAACTTCGTCGTCACTGTTTAGGTTTAGGAATAAGATTTTTCATTAGGGTTGACGTTTTCTCTTCCCTGCACTCTGGTTCTTCTAATCGGCCATGGACGTCGTCAAGAAGCGAAAGATGGACGAAAACGGAGCCCTTTCTTCCGATTCCGACAACTCTTCGCTAAATCTTTCACCGGAAGATGCTCGCAAGATCATCGAACGGTTCACTCCGGATCAATTAATCGACATTCTTCAAGACGCCGTTTCCCGCCATTCCGAAGTGCTTGACGCCGTACGCTCCGTCGCCGATCACGACGTTGCTCAACGGAAGCTCTTCACTCGTGGGCTTGGTTGGGATACCACGACCGAAGGTCTCCGTAACCTCTTCTCCGTTTACGGCGAGCTTGAAGAGGCCGTCGTTATTTTGGATAAAGCTACGGGGAAGTCGAAAGGGTATGGTTTTGTCACGTTTAAGCATGTGGATGGGGCTTTATTGGCTTTGAAAGAGCCGAGTAAAACGATTGATGGGCGTGTGACGGTTACTCAATTGGCAGCTGCCGGGAATACTGGGTCTAGTTTGAATGTTGGCGATGTGTCGTTGAGGAAAATTTATGTTGCTAATGTGCCTATTGACATGGCTGCTGATAAATTGCTTGCGCATTTTGCTTTGTATGGGGAGATTGAGGAAGGGCCTTTGGGATTTGACAAGCAGACGGGGAAGTGCAGGGGGTATGCTTTGTTTGTTTACAAGAAGGCAGAGGGTGCACAAGCGGCGTTGGTGGATCCGGCTAAGACTATAGAAGGGCGACAAGTGAGTTGTAAATTTGCCAATGATGGAAAGAAGGGAAAGCCTGGAGGTTCTGGGCCGGATGGCGTTCAGGGCTCTGTTGGTAATCAAGGTAATGTGCATGGAGATGGGGCAGGTATGCCTTCGCAGGCTCCAATGCCTGGTTCAATGGGTGGTCAGTATGGAGTACTCGGTGGCGGCATTGGATCATACGGTGGGTATTCAGGAGGTCTTCATGGTCCACCCCAACTTGGGTATAACCCGCCGAACTCGTCCACGGGTGGTCCTGGCTTGTCTTCAATGGGTAGTCTAACACATAATTCTCTGAATGGTACTGGTGGATATGGTGGTGGGCTTGGCAGCGGTCCTTACGGTGGTGGATATGGTGGTCCTGGGTCTACCGGCTATTCTGGTTTGAGCGCTGGTGCAGCCGGCAGCCTGGGAAGTGCAGCTCCGGGAACAGGATCTGGTTTGTACAGGTTGCCCTCGAATTCCGGCGGAGCTCCTTCTAATGGCTTTCCAGATAGTTTGCCATATGGGTTATCGTCCTCATCTGGTTATCCAAATCAGCACCATCAGACAACAGGTGCATCAGCGGCTCCAAGAATGCCAACTGGGGGCATGTACCCTAATGTGCCACCGTTTTATTGAGGTATTTTCAAGCAAGTCATTTATTTTCTCTACTGTTGCATTATCCATCATCTGTAATGGTGATTTGTTTCTCTGGTTACTGTTTGATGGTCTTATCTTTTTATGTTCACTAATTTGTTATTGTATTTGAGTTAAAAAAAAGGCTTGTCTGTTGTATCCCTGGGATTTTATTTCACTTGTCCATTGTAGTCTGTGCATGATTAATTTGTTATTAATCACTTGCGATTTTATTCTTGAGGCTTACTGTTAATAGTGCCCCATTTTATTGTTTGTATGGATCTTATTATTCATTTATGATCATATTTAAGTTCTGTTTATTCCATGGTCATCATTCAATTTGTATACATACTTATTGCATTCTCTTTGGTCATCAACATGTGATGTTCTGACGTTTTTAGGTTCTAGTACAATTGTACAAATGCGTATTAGGTCATAATTTTCAGGGGATATTTGTTTTTTTGTAGTGCTTGTGCTATTTTGCTTAGTAGTAGAATTGTGCTTTCCGATTGATTTATAGTAATTTTTATGTAGTGTTTTTGTTTCATTGGGATGATTTTAGGTTCTCTCAATGGGTTATGCATTCTTTTTTCGAATTTTATTGAATCCCACGGTCCACCTTTTTGGTATATTATATTACTTCTTTTCCTTCTGTTTTTGATGCTTATTCTAATATGTCATGGCTTTTATATGTTTCACTGTCATATATTGTTTTGAGAACTTTCCTTTATCCAGTGTGTTGGCTTTCTCATTTCAACATTATTGTGCTTTCTTTTTCCTTGCTAGTGCTGTTTTTTTTCTTTGTCTAGTATCTTATGTTTGGTATAACAATTCATTATTACATGATAGAAAACATACACACACATTTATTAGAAAAAGTCTGGGCATGCTTATTTTTCAATCCTCGCACTCTTCAGTGCATTGCTCCCTACACCATTTTCCTCCCATCTGTTTTCTTCTCTCCTTTCAAGTATTGTGATGGCTTTTACCATGTTTGAGATCGAAGCTTGTGGAGGACTGTGTGATAAATCTTTCCTATTTGAATTTGAATAACTCTGCTATATATTTCTTCTGGGGGCACTGGGGCAGGGTTTACTTCTCAAGGCATAAAGCATAACATCAATAAAGTTTTGTTTTTATTTTGAAGTTGTCTGTTCCTGCTCCCCATATCTTGTAGAATCTGTGTTCTATTTATTTGATTTTGGAGAACTGAATATTATTGTTCTTTTCAGGCCATTTTCAGGATACCTTCCATATTGGGCACAAGATTTTTGCCGTCTTTATTTGTTATATACACGTAACAGTTGGTCTTTTCCCTGAACATTAAAAACAATATAGCTTTTAGTTGCTCTTCTTGCACGGATCATTTTTGTCATTTCAAATTTACTAGTGATTAGTTATTTCTAAATTTCAGGTGTTTTCTATTGCTATCTAGTTATGCCAATAACTTTAGGCCCGCTTACCCATTGATTGTATAATTTCGTTTGATAGGGTTTGCTATCTAGTTTGCAATTACTTTACATCTTGAATTTTATGTTGGATTTGCAACTTTTGACGACTTGGAATAAACTTATATTTTTGTACTCTTCATCGTTGTGTTCAGTTGTTTGGTTATCTTTCTGTTGTTTCTATTATTTTAACTATTATTTTAACTCTGAATTAGATGAAAGCCCACTTTGCATTATGAGGGATATGATGGAGTGGAGTAATGAGTTCAACATGGGTATTTGATTCGGTTTATCTTGTTGGATGCAGATGCTTTATGTGCTTCACCTGATTGCCTAGAATGCCGTCTATCGATCTGATTTGGTGAATGTATTGGCTGTGCTTTTGTGACCTCTTTTCTAGATGTATTTATGAGTGCTATAGAAAGAAATCATGCAGTGGTGTTTTTGTACTTGTCAATGATTAACTTGTTTTTTTGGTTTCCCTCCCCTCCCCTCCAGAATAGTATAAATAATGATCACTTATTTCTGTGTCTTTCCCTTTTTTCTTTGAGGGGATTGAGTCTCTGGGTAGTTTTATATTGATAGCCCCTCGTTTTTGTCTATCCACTAAAGCTCTCTATGCAAATTTCAAGAGTTGAAGAGAGGCTTGCCTTTTTCACTTGTGGTTGAACTGATATTCCAGGTTTCTTTGTAATTGTATTTGCACTTTGTGATTAGAAGAAAATTTTGGCAGTGAGCATTCTCGCAGATTCTTTGTTGTTGTTGTTGTTGTTGTTTTTTACTTTATGTTATGACTTAAGTTTTTATGCTGCATCTGCAATTCAACTCATTTGCTCTTGAATCCACCTATTGGTGATTTAACACTTGTGAACCAAACGATGAAATTTTGTATGTGTGATTTTCAGTCAAGATTTTGTAGTAATGTGTTAAGGAACATTTTGCTTTGGAATTTGATTGGTATAGGTGCATACCCAATTCTTCTACCATGGGAATTTGATTGATCGAGGCTGAGACAAAGAAAAACTTGCCTGACGTCCATCTGTAACAAAGTTTAGGTGGCAGTGGAAAAATTGCTTTCTTTGTAAGTTGAGGAAGACAGGATTTGTCTGCAACTCATGTGGCTGATCCATATCAGGCGAAGGCAAAAATAGAGTTCGAGCAGTTGGCTAGCCTTCAATGATGAGACTCGGAAAAGAAAGTATACCAGTATTGATGATTTTCACAGGCGGGGACAATCTGCATAAACTAATCAACGAGCTATCCTTTGCCAACCACCCTGGATTCTCCTCTCTATAATTTGTACTATCTTCCTTCATTAGAAATGAGGTTAATTCATGGACTAAACCCAAATATTTTATAAATAATTTCTATAAGTTTTTTTAAATTATTATTATTAAAATTGGTGATTGTTTTGTAAGAATAGTCAAGTGTAAGTTGATTTGATAATTAACTATATTTGATTGTTTTGTAAGAATAGTTAAGGAATGTAGAAGGTTTTTTTTTCTTTTTTTTTTTCAAGTAATGAAATATATGATTTAGTTATTTATTTATTTAATTTTTTAAATTAAAATTTATTATTTTATAAAATTAAGTATAAAACTTATTGTTAGGCAAGTTAGCAAGATGGTGTCCAGGGAAACATTGTCCTAAGGAAAACCGAAAGTTGAACGTCGGATCTGCATAATAATGGGGTTGTCTCTTCTCCGTTCTTTAAAAATTGTATTCTGTTATGTCACGATGACTATAGTAGTCTCTTATATATATATATATATATATATTTATTTTTAATTGAAAATTGTTGTGTTTTTGAAGGATTTGTCGGGGATGTTAAATTATATGGATTAATGCCAACTATTGTGGTAAGTTTTTTTTTTGGATAAGTTTTGATAGTAGTCTCATATTATATGGATTCCTGTAAATTAATGTCAACTATTATGGTAAGTTTTAACCCATTAGTTGGGACGATTGTATCTTTTAAGAGTTGTTTTCTTTGTTGATATAGTTTTAGACTATTTGGTGCTATACAGATTAATGGGTAATGTTCAATTAATACCTCTTGAACTGAGGTAAGTAAGTCAAGTTTAACTACAGAATCTCATGTCCAACAAATAGAAGTTTGTATTCTTTCAATATGAAGCAAAAACTAGGTAGCTCTAAAATTTGACCTTAATATGAAATACGTTTATAATTTTTTGTCGAAAAATTAAAAAAAGTACAAACATTTGTTCCTGAGCCGCTGCCGATGAATAAGAGCCGTTTTCCAGCCAATCGGTCAGCTCAGGTTGCCTACTTATTAATTCTTCATACTCTACTGTTGATCGCCTACCCCTTTTGATTCACTTTCCGTGAATGCTGCATAAATTTTGATTTTTTATACGATTTAAAGTACTTTGTTTGTTGATTTTACTGTGATCGCTTAGAGACGCCGAGTTGGAAGGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTAATTCTTATTCAACATGTTTGAGTTGGCTTGATTGCATTTGTCCCCAAGAGGTGACGCAATGGTTGAAGACTTGGGTTTTGAGAGTATGCTCCCCTCAAGGTCCTGAGTTTGAGTCTCTCCTGTGACATTACTCCTTCGATGTCTCCGGTGTCTGGCCTAGGGACGGATGTGGTTATCTTATTTAAAAAAAAAAGTAGGCTTGATTGCATTTATAAGAATTGAAAATAATTATTGGCACTGTGGAGAAAGGAAGCTATGTTGCGGCTGTTATTTATGTTGTGGTTGTAACTTCGTAAGCATGAAAATTAAGAAAACAAGAGAAATGAGGTGTTCTTGTACCATTTCAGCTTTTCTTTGTTCAATTGATCTTGGTATTGTATTATAATTAAAAAAAGACTATGTGATAGTACAATCTGCTGTGGCTGTTCTTCAACTTGGTCTTGTAGTACTGTTTCTTTGATTCTAAGGATTATGAACCTTGCAGGTGAATAAAAATGAATTTGGAACATAAAGCTATTACTTGGGTTGGAAACATGTTCCAGAAATTTGAAGCAGCGTGCCAGGCAATGGATAGTGTAATTAACCAGGTATCCCATTTTTTTCCTTTTTCCTTACATTCAGTGATCCAACATTTAGTAATTAGTCACTGAGGTTTGTTTAAGGACTCTGATCCTTACAAGGGTCTGATTAGCACCAATCAACCAAATTCACACGAGAAAGTATAACCCCAGAGTAGTCACTAAGTTCGAGTGTTAATGGAGATGCTATGATATTAATAAAGTTAGTTGGGACTAATGACGAAACAACTGCTCAAGTTTCCTTTGTAAATGAAGAAGCTAAGCTGCTCAAGTTTCAAATCATTTTTTTTTCTCTAGAGTTGAATGCTGATTTACCTATGCAATAGAATAATGATGTCTTGTTAGATAAAGCTTATGTGAGAGCAGGAAAGGAAATGCCTTCAATGAACTACTTTCAGAGAAAAGTGAGGACCATGGACAAATTAAGCTTGCCTTCATGGAGTCAGATGTTAGTGATCCTTTGAGTCTTTCACTGAGAAATGTAATTAGTGAAATTAATGATGCAAAGAGAGCATCTTCAGTTTGTGAGGACTCTGATCTGCAGTTTGTGACGAAACATCTTCAGTGAAATTAATGATGCAATCTTCCAGACTCTCAACAAAGAACGACAATGGCTTGTCAGATGAAAACTCATATGAGTTTTTAATGAAGGTTGTCATCATGGAGGCTACTAATGCTACAGATAATTTGAACAATGGCCATCTTAGCCATTTATGGAGTGAGACAAACTTTGTAAGTAGCTGATGATTCTAACTTGCTTTTGAAGTCTGAGGTACTTTCAGGCAGAATTGGCCATGCCTTGATGGATAAAGACTTTAATGAGAATCCTATAAAGGATTCTATCTTTGAGGATGATCCTAGCATATGTTTTTTGAATCTTTCCACTCATGGAAATGGAGTTAGCTTCACTAATGGATAAGCTATTGTGGTTTCTGATAGTAACCATCTGCAGTTAGAGCCTGAGCTACTTGCTAGAAAGAATGAAGATGCCTTGACAGATAAATACCCTCCTGAAAGTTTTAAAAGAGGATATCATCTAGGAGTTGGAGCATGATGCAAGTTATCCTTTAAAGAACCAAGCCAAGATGTACCAAACTGCATAAAATATAAAATGAAGTTTCTTCAGTTTCAAATGATTCCTTTCTAAAGTTGGAGACTGAGGTTTATGATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAAAGAATCTCTTGAGCCCTTACAATAAATCACTCAATAACTCATTTAACAATTGGATGCCTAAACTCTAACCTAACCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAACCTTATCAATACCCGCCCCTTTAAAGCACCTTGTCATCAAGGTGGGCATAAACAAAAATAGATTTTTTTTTTTTTTTTTTTTTTTTTTTAAGGCGGCAGCAGCGGCGCGTCGGTGGTGGAGGCAGCAGTGACAGAGGTGGTGGTGATGACAGTAGCGGCAACACTGGTGGTGGTGGCGGCGGCAGTGTCGGAGGTGGTGACGGTGGAGATGGCAGCGGCGATGTTAGAAGTGGTGGCGGCGATGGTGGTGGCGGAGGTGGTGACGGCGGCGGCAGCAGCGCCGCAGGTGGGGTTGGTGATGGTGGTGGAGGTAGGGGCAACGGCGGCAGCAACGACGGTGGGGAAGGCGGAGGCGGCAACGGAGGAGGCGGTGGTGGCGGGGTCAAAACCCTAGCCGTCATTGTTTTTTCCAACCTAATTTCCTCCCCAAAACATCGTTTTAGTTCATTGAAACTCTCCTTTAGGTCTTCTCTAATTTCTTTTTTTAGAGAAGCTACCTCTTCTCTGAGGTCTTTTTTCAAGTCCACCATCAAACTTTGCAACTTTTCTTGAATGAAACGAAGAACCTCTTGATCCATCTCTAGAACCAAGAATCGAACGGCTCTGATACCAATTGATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAAAGAATCTCTTGAGCCCTTACAATAAATCACTCAATAACTCATTTAACAATTGGATGCCTAAACTCTAACCTAACCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAACCTTATCAGTTTATTGTGAGAAGAATATAATGAAGCTTTAATAGATATGGTGGTGATGAATATAAGGAAACTTTGGGAAGTTGTGATGTGAGTGTGAAGAGGATATGGTGATCTCAACTGGAGGGGTCCACTAGGTAACTTTGATTCATGGTTCAGATGTTGAACCCACCCATAATGTAAGACAAGCTTCTAGCATCTTGGCAAACAGTTTAGTTAACTTCTCACCAAAGATGAAGACAACTTCTAAGTACTTGGAAAATGGAACTGGTTGCTCTAGCTCAACCATTTCTGGGGCTAAATTGTTACCTACTAACCTTTAGGGATCATATTATTAAAAAAAGAGTATTGGGACTAAATTGCTACGAATTAAAGTTTATGTTATCTTCTTTGTCATCTAACCTTACCTGATTCCTTGACCAGGTCCACATGCAATACTTTCCATCCACAAGTTGAAGGTGCCCGGGCTGATTGAGATGCAGTCGTCGCAGGTGCCAATGCTCAAGCTGAGGATGGTGGCGTCGGATGATTCTTGCACATGGATGCTGTTGGATGATTCTTGTACGTGGATGCCATCGGTGTTCAGGCTGTTGCTGGCGAAAGATTCATGGACTCTAAGTACCTGATACCAGTAGCCAGGTAGCATTTTCCAAATCTACTAGTTCGGAGGCTCCAAGTCTCTCTACTGGATTAGGTGTGTCCCATAGCTTGTTATGATACTATTCTTTCAATTTCTTGCTGTCTTCTATAATTATAATGACAATGTAGTAGTTCAATCTGTTGCCTATTTCCATTGCAGATGCAAATGTTACTTGTCTGTTTACAATTGGAAACGATTAGCTAAGTCTAACCCTACCAATCACAGTATGTTGATTAAGCTAAAAGAGATAAGCTGTTTAGTTATGGAAATGATTCATTCTATTTTTCTTCAAACCTCAGAAATGACATTAAAAATTGAAGAAAATCTTTTATCAATTCCCCACTGTCCCCAGACATTAGATAGCAATAATCTTAAAAACTTTTCTCAGGTCATCCATACAATTCACTTCTGGATGCTCTTTTTCGGATGCTGAGATGGAAGCATTGGATACAGAACATCAGGTGGTGTTAAAGATGAGTGTGTATGCTCCCTCAAGGTCCCGGGTTCGAGACTCACCTATGAGTCTGTGACATTACTGATGTCTCCGGTGCCTAACCTAGGGACGGGCATGGTTACTCTTGTTTCAAAAAATGATGAGTGTGACACATTCACTATTAAGCTCTCCATGATGTCTCTCGCAGAACCCAAAAGCTCCCTTCTTACAAGGTTTCTCTCCCTCAATTGAGTTACTTTTTCATTTCGTATACAATCTAAAGTTAGCCTCCTCTAACAATGTTCAGGTAAAAATATTAAAAACCCGGATACACTTTTCCCGCGTTAAGATGTTAATGTTTAACCGTTGGTTTCATCCCAACCTAGAAAAACAGAACGGAAAAAAAAGAACAAGAGTTCATAACTAAAATGCAAAACATAGGAGGAACTTTTATACTGTGAAGGAGGACTATCTAGTTTGCCTAATGAAATACCATTATCTTTTATCTCCATTATTTTCTTTCCCTCTCCATAAATTTCCAAGGTGCCCTTTTGTTTTTGATCTATGGTTCTTTACTTTCTGAAACATAGAATTTGAACCCAGGATGCCTTCAAATTCGAAAAAGAAGTTGGCAGAGTACGAGGATATTGATCTGGAACTCAGTACAGACGGTACATAGAAGTTGAACTCGAAGAATGTATCAACTACTTATGCATCTGACTCTGAGTGGGAGATCCTGTAAATAAAATAGCCAATTCAGTTTATTTCTTCAATCAAAATTGTTTCCCGGAACTGGAAGAGGTGAATCCTTTATGCTCGGTCGAGATGAAGAGTATGCTAATCGATAAATAAATACTCAAGATTAACAACCATCATTGAGTGGCCTAGTAGTCAAGAGGGCCTTAAGTAACTAAGAGGCAATAAGATCAATCTATGATGGCCATCCACTAGAAATTAATTTTCTATGCGTTTGTTTGACATCCAAATGTTATAGGGTTAGTCGGTATTGTCCTGTGACAAATGAAAATAGTGAAGGTGCACGTAAACTGGCCCGAACAGTCAAGGATATAAGAAAAAAAGATTAACCATCATAGGATAGGTTGGTTAGTGGTCAATGAGAACCTTTGAAGCCTTAGTGTGCCTTAGAGTGAATAAGTTCAATCTATAATGGTTACCTACCTAAGAATTAATTTCTTACAAATTTTCTTGACAATTAAATGTAATAGGGTTAGACAGTTGTCTCATGAAATTAGTCGATTGGTCTAGTGGTCAATAAAAACCATGGAAGTCATTGAGTGCTTAGAGTTCAATCTATAGTGGTTACCTACCTAGAAATTAAATTTCCTACGAGTTTCTTGGACAATCAAATGTAATATGACTAGACAGTTGTCTCATAAGATTAGTTGAATTGCACGTAAGCTAACATAGACACTCACAGATATTTAAAAATGAATACTCAAGATTAAGATTCATCATCACTTTTATCTTTTGAAAGGCAGGACACCCGGTAAAAGTTACCTTGGAAATTACCAAATAAATGTTACAAGAAAATTTGTGCATATGGACACTCTCTGGGTGAATCTATGATGTTTTAATTAATTTATTAAATAAGTAAAGAATCATACATACATATCCTGGGTTAATAAAGATATCCTGTTTTTTCTGTTTGGAAAAGATCTTTTTTTCTTTTGTTTTTTTTTACCTTTTTTCTACTGGATTATAAAATTGAAATGAAAACTTTGAACTTTTTCTAGTACTCACAGTGATATCCTTTGTTTTCCTTAGACTTGAAATCATGTTGAGTTCGACAACTGAAGTGCTTTGGCTGTTCTTTCTTCCCATCCAGACATTTGGACAAAATCCCATTTCACCTTCAACCACTATAAATCACAGGCTCTCATTCTTTCCTCCACTGAATAAGCTGGTATTTGGTCATTTCATAGTTTGGTAGAATGATGATGTCAATGGAATAGAAAGTGACAAACAGTAAATCTCCTTTTTTTTAATAATATTTTTTTTATATAGAAACTTTGCATGTTGGTATGATTGTCTTTGTCCTTCATGTTGGAACAGCCTGGAGGCTGTAACTGCTATGTAGAAGTTTATTTTCAATATCTATATCAAATTCTGTAACTGTCTTTTCTTT

mRNA sequence

AAACGACGACCGGCATTTACCAATCGGCAACTTCGTCGTCACTGTTTAGGTTTAGGAATAAGATTTTTCATTAGGGTTGACGTTTTCTCTTCCCTGCACTCTGGTTCTTCTAATCGGCCATGGACGTCGTCAAGAAGCGAAAGATGGACGAAAACGGAGCCCTTTCTTCCGATTCCGACAACTCTTCGCTAAATCTTTCACCGGAAGATGCTCGCAAGATCATCGAACGGTTCACTCCGGATCAATTAATCGACATTCTTCAAGACGCCGTTTCCCGCCATTCCGAAGTGCTTGACGCCGTACGCTCCGTCGCCGATCACGACGTTGCTCAACGGAAGCTCTTCACTCGTGGGCTTGGTTGGGATACCACGACCGAAGGTCTCCGTAACCTCTTCTCCGTTTACGGCGAGCTTGAAGAGGCCGTCGTTATTTTGGATAAAGCTACGGGGAAGTCGAAAGGGTATGGTTTTGTCACGTTTAAGCATGTGGATGGGGCTTTATTGGCTTTGAAAGAGCCGAGTAAAACGATTGATGGGCGTGTGACGGTTACTCAATTGGCAGCTGCCGGGAATACTGGGTCTAGTTTGAATGTTGGCGATGTGTCGTTGAGGAAAATTTATGTTGCTAATGTGCCTATTGACATGGCTGCTGATAAATTGCTTGCGCATTTTGCTTTGTATGGGGAGATTGAGGAAGGGCCTTTGGGATTTGACAAGCAGACGGGGAAGTGCAGGGGGTATGCTTTGTTTGTTTACAAGAAGGCAGAGGGTGCACAAGCGGCGTTGGTGGATCCGGCTAAGACTATAGAAGGGCGACAAGTGAGTTGTAAATTTGCCAATGATGGAAAGAAGGGAAAGCCTGGAGGTTCTGGGCCGGATGGCGTTCAGGGCTCTGTTGGTAATCAAGGTAATGTGCATGGAGATGGGGCAGGTATGCCTTCGCAGGCTCCAATGCCTGGTTCAATGGGTGGTCAGTATGGAGTACTCGGTGGCGGCATTGGATCATACGGTGGGTATTCAGGAGGTCTTCATGGTCCACCCCAACTTGGGTATAACCCGCCGAACTCGTCCACGGGTGGTCCTGGCTTGTCTTCAATGGGTAGTCTAACACATAATTCTCTGAATGGTACTGGTGGATATGGTGGTGGGCTTGGCAGCGGTCCTTACGGTGGTGGATATGGTGGTCCTGGGTCTACCGGCTATTCTGGTTTGAGCGCTGGTGCAGCCGGCAGCCTGGGAAGTGCAGCTCCGGGAACAGGATCTGGTTTGTACAGGTTGCCCTCGAATTCCGGCGGAGCTCCTTCTAATGGCTTTCCAGATAGTTTGCCATATGGGTTATCGTCCTCATCTGGTTATCCAAATCAGCACCATCAGACAACAGGTGCATCAGCGGCTCCAAGAATGCCAACTGGGGGCATGTACCCTAATGTGCCACCGTTTTATTGAGATGCTTTATGTGCTTCACCTGATTGCCTAGAATGCCGTCTATCGATCTGATTTGGTGAATGTATTGGCTGTGCTTTTGTGACCTCTTTTCTAGATGTATTTATGAGTGCTATAGAAAGAAATCATGCAGTGGTGTTTTTGTACTTGTCAATGATTAACTTGTTTTTTTGGTTTCCCTCCCCTCCCCTCCAGAATAGTATAAATAATGATCACTTATTTCTGTGTCTTTCCCTTTTTTCTTTGAGGGGATTGAGTCTCTGGGTAGTTTTATATTGATAGCCCCTCGTTTTTGTCTATCCACTAAAGCTCTCTATGCAAATTTCAAGAGTTGAAGAGAGGCTTGCCTTTTTCACTTGTGGTTGAACTGATATTCCAGGTTTCTTTGTAATTGTATTTGCACTTTGTGATTAGAAGAAAATTTTGGCAGTGAGCATTCTCGCAGATTCTTTGTTGTTGTTGTTGTTGTTGTTTTTTACTTTATGTTATGACTTAAGTTTTTATGCTGCATCTGCAATTCAACTCATTTGCTCTTGAATCCACCTATTGGTGATTTAACACTTGTGAACCAAACGATGAAATTTTGTATGTGTGATTTTCAGTCAAGATTTTGTAGTAATGTGTTAAGGAACATTTTGCTTTGGAATTTGATTGGTATAGGTGCATACCCAATTCTTCTACCATGGGAATTTGATTGATCGAGGCTGAGACAAAGAAAAACTTGCCTGACGTCCATCTGTAACAAAGTTTAGGTGGCAGTGGAAAAATTGCTTTCTTTGTAAGTTGAGGAAGACAGGATTTGTCTGCAACTCATGTGGCTGATCCATATCAGGCGAAGGCAAAAATAGAGTTCGAGCAGTTGGCTAGCCTTCAATGATGAGACTCGGAAAAGAAAGTATACCAGTATTGATGATTTTCACAGGCGGGGACAATCTGCATAAACTAATCAACGAGCTATCCTTTGCCAACCACCCTGGATTCTCCTCTCTATAATTTGTACTATCTTCCTTCATTAGAAATGAGGATTTGTCGGGGATGTTAAATTATATGGATTAATGCCAACTATTGTGGTGAATAAAAATGAATTTGGAACATAAAGCTATTACTTGGGTTGGAAACATGTTCCAGAAATTTGAAGCAGCGTGCCAGGCAATGGATAGTGTAATTAACCAGGTCCACATGCAATACTTTCCATCCACAAGTTGAAGGTGCCCGGGCTGATTGAGATGCAGTCGTCGCAGGTGCCAATGCTCAAGCTGAGGATGGTGGCGTCGGATGATTCTTGCACATGGATGCTGTTGGATGATTCTTGTACGTGGATGCCATCGGTGTTCAGGCTGTTGCTGGCGAAAGATTCATGGACTCTAAGTACCTGATACCAGTAGCCAGGTAGCATTTTCCAAATCTACTAGTTCGGAGGCTCCAAGTCTCTCTACTGGATTAGGTCATCCATACAATTCACTTCTGGATGCTCTTTTTCGGATGCTGAGATGGAAGCATTGGATACAGAACATCAGGTGGTGTTAAAGATGAGTGTGTATGCTCCCTCAAGGTCCCGGGTTCGAGACTCACCTATGAGTCTGTGACATTACTGATGTCTCCGGTGCCTAACCTAGGGACGGGCATGGTTACTCTTGTTTCAAAAAATGATGAGTGTGACACATTCACTATTAAGCTCTCCATGATGTCTCTCGCAGAACCCAAAAGCTCCCTTCTTACAAGGATGCCTTCAAATTCGAAAAAGAAGTTGGCAGAGTACGAGGATATTGATCTGGAACTCAGTACAGACGGTACATAGAAGTTGAACTCGAAGAATGTATCAACTACTTATGCATCTGACTCTGAGTGGGAGATCCTGTAAATAAAATAGCCAATTCAGTTTATTTCTTCAATCAAAATTGTTTCCCGGAACTGGAAGAGACTTGAAATCATGTTGAGTTCGACAACTGAAGTGCTTTGGCTGTTCTTTCTTCCCATCCAGACATTTGGACAAAATCCCATTTCACCTTCAACCACTATAAATCACAGGCTCTCATTCTTTCCTCCACTGAATAAGCTGGTATTTGGTCATTTCATAGTTTGGTAGAATGATGATGTCAATGGAATAGAAAGTGACAAACAGTAAATCTCCTTTTTTTTAATAATATTTTTTTTATATAGAAACTTTGCATGTTGGTATGATTGTCTTTGTCCTTCATGTTGGAACAGCCTGGAGGCTGTAACTGCTATGTAGAAGTTTATTTTCAATATCTATATCAAATTCTGTAACTGTCTTTTCTTT

Coding sequence (CDS)

ATGGACGTCGTCAAGAAGCGAAAGATGGACGAAAACGGAGCCCTTTCTTCCGATTCCGACAACTCTTCGCTAAATCTTTCACCGGAAGATGCTCGCAAGATCATCGAACGGTTCACTCCGGATCAATTAATCGACATTCTTCAAGACGCCGTTTCCCGCCATTCCGAAGTGCTTGACGCCGTACGCTCCGTCGCCGATCACGACGTTGCTCAACGGAAGCTCTTCACTCGTGGGCTTGGTTGGGATACCACGACCGAAGGTCTCCGTAACCTCTTCTCCGTTTACGGCGAGCTTGAAGAGGCCGTCGTTATTTTGGATAAAGCTACGGGGAAGTCGAAAGGGTATGGTTTTGTCACGTTTAAGCATGTGGATGGGGCTTTATTGGCTTTGAAAGAGCCGAGTAAAACGATTGATGGGCGTGTGACGGTTACTCAATTGGCAGCTGCCGGGAATACTGGGTCTAGTTTGAATGTTGGCGATGTGTCGTTGAGGAAAATTTATGTTGCTAATGTGCCTATTGACATGGCTGCTGATAAATTGCTTGCGCATTTTGCTTTGTATGGGGAGATTGAGGAAGGGCCTTTGGGATTTGACAAGCAGACGGGGAAGTGCAGGGGGTATGCTTTGTTTGTTTACAAGAAGGCAGAGGGTGCACAAGCGGCGTTGGTGGATCCGGCTAAGACTATAGAAGGGCGACAAGTGAGTTGTAAATTTGCCAATGATGGAAAGAAGGGAAAGCCTGGAGGTTCTGGGCCGGATGGCGTTCAGGGCTCTGTTGGTAATCAAGGTAATGTGCATGGAGATGGGGCAGGTATGCCTTCGCAGGCTCCAATGCCTGGTTCAATGGGTGGTCAGTATGGAGTACTCGGTGGCGGCATTGGATCATACGGTGGGTATTCAGGAGGTCTTCATGGTCCACCCCAACTTGGGTATAACCCGCCGAACTCGTCCACGGGTGGTCCTGGCTTGTCTTCAATGGGTAGTCTAACACATAATTCTCTGAATGGTACTGGTGGATATGGTGGTGGGCTTGGCAGCGGTCCTTACGGTGGTGGATATGGTGGTCCTGGGTCTACCGGCTATTCTGGTTTGAGCGCTGGTGCAGCCGGCAGCCTGGGAAGTGCAGCTCCGGGAACAGGATCTGGTTTGTACAGGTTGCCCTCGAATTCCGGCGGAGCTCCTTCTAATGGCTTTCCAGATAGTTTGCCATATGGGTTATCGTCCTCATCTGGTTATCCAAATCAGCACCATCAGACAACAGGTGCATCAGCGGCTCCAAGAATGCCAACTGGGGGCATGTACCCTAATGTGCCACCGTTTTATTGA

Protein sequence

MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDAVRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFANDGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYSGGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTGYSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTTGASAAPRMPTGGMYPNVPPFY

Homology

[Close]

BLAST of Sed0024539 vs. NCBI nr
Match: XP_022940378.1 (UBP1-associated protein 2C-like [Cucurbita moschata] >XP_022940379.1 UBP1-associated protein 2C-like [Cucurbita moschata] >XP_022940380.1 UBP1-associated protein 2C-like [Cucurbita moschata] >XP_022940381.1 UBP1-associated protein 2C-like [Cucurbita moschata])

HSP 1 Score: 728.0 bits (1878), Expect = 4.8e-206
Identity = 387/441 (87.76%), Postives = 402/441 (91.16%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRKMDENG   +DSD+S L LSPEDARKIIERFTPDQLIDILQDAVS HS+VLDA
Sbjct: 1   MDVVKKRKMDENGVPLTDSDDSLLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD DVAQRKLF RGLGWDTTT+GLR LFS+YGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVS+RKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF LYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDP KTIEGRQVSCK+AN
Sbjct: 181 LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGGSGPDGVQGSVGNQGNVHGDG GMPSQAPMPGSMGGQYG   GG+GSYGG+S
Sbjct: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGG-PGGLGSYGGFS 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
           GGLHGPPQLG+N  NSS  GPGLSSMGS T NSLNGTGGYGGGLG GPYGGGYGGPGSTG
Sbjct: 301 GGLHGPPQLGHNTLNSSL-GPGLSSMGSQTQNSLNGTGGYGGGLGGGPYGGGYGGPGSTG 360

Query: 361 YSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTT 420
           +SGLSAG AG  GS+  GTGSGLYRLP NSGG PSNG+PDSLPY LSSSSGY NQH  TT
Sbjct: 361 FSGLSAGPAGGQGSSGAGTGSGLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNQHPHTT 420

Query: 421 GASAAPRMPTGGMYPNVPPFY 442
           G S APR+P GGMYPNVPPFY
Sbjct: 421 GTSPAPRVPPGGMYPNVPPFY 439

[Close]

BLAST of Sed0024539 vs. NCBI nr
Match: XP_023524648.1 (UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023524649.1 UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023524650.1 UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023524653.1 UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023524654.1 UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726.1 bits (1873), Expect = 1.8e-205
Identity = 386/441 (87.53%), Postives = 401/441 (90.93%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRKMDENG   +DSD+S L LSPEDARKIIERFTPDQLIDILQDAVS HS+VLDA
Sbjct: 1   MDVVKKRKMDENGVPLTDSDDSLLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD DVAQRKLF RGLGWDTTT+GLR LFS+YGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVS+RKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF LYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDP KTIEGRQVSCK+AN
Sbjct: 181 LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGGSGPDGVQGSVGNQGNVHGDG GMPSQAPMPGSMGGQYG   GG+GSYGG+S
Sbjct: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGG-PGGLGSYGGFS 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
           GGLHGPPQLG+N  NSS  GPGLSSMGS T NSLNGTGGYGGGLG GPYGGGYGGPG TG
Sbjct: 301 GGLHGPPQLGHNTLNSSL-GPGLSSMGSQTQNSLNGTGGYGGGLGGGPYGGGYGGPGPTG 360

Query: 361 YSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTT 420
           +SGLSAG AG  GS+  GTGSGLYRLP NSGG PSNG+PDSLPY LSSSSGY NQH  TT
Sbjct: 361 FSGLSAGPAGGQGSSGAGTGSGLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNQHPHTT 420

Query: 421 GASAAPRMPTGGMYPNVPPFY 442
           G S APR+P GGMYPNVPPFY
Sbjct: 421 GTSPAPRVPPGGMYPNVPPFY 439

[Close]

BLAST of Sed0024539 vs. NCBI nr
Match: KAG6607907.1 (UBP1-associated protein 2C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037435.1 UBP1-associated protein 2C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 724.5 bits (1869), Expect = 5.3e-205
Identity = 386/441 (87.53%), Postives = 401/441 (90.93%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRKMDENG   +DSD+S L LSPEDARKIIERFTPDQLIDILQDAVS HS+VLDA
Sbjct: 1   MDVVKKRKMDENGVPLTDSDDSLLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD DVAQRKLF RGLGWDTTT+GLR LFS+YGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVS+RKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF LYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDP KTIEGRQVSCK+AN
Sbjct: 181 LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPG SGPDGVQGSVGNQGNVHGDG GMPSQAPMPGSMGGQYG   GG+GSYGG+S
Sbjct: 241 DGKKGKPGVSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGG-PGGLGSYGGFS 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
           GGLHGPPQLG+N  NSS  GPGLSSMGS T NSLNGTGGYGGGLG GPYGGGYGGPGSTG
Sbjct: 301 GGLHGPPQLGHNTLNSSL-GPGLSSMGSQTQNSLNGTGGYGGGLGGGPYGGGYGGPGSTG 360

Query: 361 YSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTT 420
           +SGLSAG AG  GS+  GTGSGLYRLP NSGG PSNG+PDSLPY LSSSSGY NQH  TT
Sbjct: 361 FSGLSAGPAGGQGSSGAGTGSGLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNQHPHTT 420

Query: 421 GASAAPRMPTGGMYPNVPPFY 442
           G S APR+P GGMYPNVPPFY
Sbjct: 421 GTSPAPRVPPGGMYPNVPPFY 439

[Close]

BLAST of Sed0024539 vs. NCBI nr
Match: XP_038899568.1 (UBP1-associated protein 2C-like [Benincasa hispida])

HSP 1 Score: 716.8 bits (1849), Expect = 1.1e-202
Identity = 383/444 (86.26%), Postives = 401/444 (90.32%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRKMDENG L  DSD+S L LS EDARKIIERFT DQLIDILQDAVSRHS+VLDA
Sbjct: 1   MDVVKKRKMDENGVLLDDSDHSVLKLSTEDARKIIERFTQDQLIDILQDAVSRHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVADHDVAQRKLF RGLGWDT+TEGLR LFSVYGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADHDVAQRKLFVRGLGWDTSTEGLRKLFSVYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVSLRKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSLRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           L+HFALYGEIEEGPLGFDKQTGKCRGYALFVYKK EGAQAALVDP KTIEGRQVSCK+AN
Sbjct: 181 LSHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIEGRQVSCKYAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGG+GPDGVQGSVGNQG+VHGDG  MPSQAP+PGSMGG YG    GIGSYGG+S
Sbjct: 241 DGKKGKPGGAGPDGVQGSVGNQGSVHGDGMSMPSQAPLPGSMGGHYGG-PVGIGSYGGFS 300

Query: 301 GGLHG-PPQLGYNPPNSSTG--GPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPG 360
           GGLH  PPQLG+NP NSS G  GPGLSSMGS THNSLNGTGGYGGGLG  PYGGGYGGPG
Sbjct: 301 GGLHAPPPQLGHNPINSSLGGPGPGLSSMGSQTHNSLNGTGGYGGGLGGVPYGGGYGGPG 360

Query: 361 STGYSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHH 420
           S+G+SG+  GAAG LGSA  GTGSGLYRLP NSGG PSNG+P+SLPY LSS +GYPNQH 
Sbjct: 361 SSGFSGMGVGAAGGLGSATAGTGSGLYRLPPNSGGMPSNGYPESLPYSLSSLAGYPNQHQ 420

Query: 421 QTTGASAAPRMPTGGMYPNVPPFY 442
           QTTG S APR+P GGMYPNVPPFY
Sbjct: 421 QTTGTSPAPRVPPGGMYPNVPPFY 443

[Close]

BLAST of Sed0024539 vs. NCBI nr
Match: XP_022981162.1 (UBP1-associated protein 2C-like [Cucurbita maxima] >XP_022981163.1 UBP1-associated protein 2C-like [Cucurbita maxima] >XP_022981164.1 UBP1-associated protein 2C-like [Cucurbita maxima])

HSP 1 Score: 709.5 bits (1830), Expect = 1.8e-200
Identity = 381/441 (86.39%), Postives = 396/441 (89.80%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRKMDENG   +DSD+SSL LSPEDARKIIERFTPDQLIDILQDAVS HS+VLDA
Sbjct: 1   MDVVKKRKMDENGVPLTDSDDSSLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD DVAQRKLF RGLGWDTTT+GLR LFS+YGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVS+RKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF LYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDP KTIEGRQVSCK+AN
Sbjct: 181 LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGGSGPDGVQGSVGNQGNVHGDG GMPSQAPMPGSMGGQYG   GG+GSYGG+S
Sbjct: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGG-PGGLGSYGGFS 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
           GGLHGPPQLG+N  NSS  GPGLSSMGS T NSLNGTGGYGGGLG GP    YGGPGSTG
Sbjct: 301 GGLHGPPQLGHNTLNSSL-GPGLSSMGSQTQNSLNGTGGYGGGLGGGP----YGGPGSTG 360

Query: 361 YSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTT 420
           +SGLSAG AG  GS+  GTGS LYRLP NSGG PSNG+PDSLPY LSSSSGY N H  TT
Sbjct: 361 FSGLSAGPAGGQGSSGAGTGSVLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNPHPHTT 420

Query: 421 GASAAPRMPTGGMYPNVPPFY 442
           G S APR+  GGMYPNVPPFY
Sbjct: 421 GTSPAPRVTPGGMYPNVPPFY 435

[Close]

BLAST of Sed0024539 vs. ExPASy Swiss-Prot
Match: Q9LKA4 (UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 5.9e-122
Identity = 266/448 (59.38%), Postives = 312/448 (69.64%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSL---NLSPEDARKIIERFTPDQLIDILQDAVSRHSEV 60
           MD++KKRK+DENG   + +   ++    LSP+DARKIIERFT DQL+D+LQ+A+ RH +V
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  LDAVRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGF 120
           L++VR  AD D++QRKLF RGL  DTTTEGLR+LFS YG+LEEA+VILDK TGKSKGYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 VTFKHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAA 180
           VTF HVDGALLALKEPSK IDGRVTVTQLAA+GN G+   + D+S+RKIYVANVP DM A
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 DKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCK 240
           D+LL HF  YG++EEGPLGFDK TGK RG+ALFVYK AEGAQAAL DP K I+G+ ++CK
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 FANDGKK-GKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSY 300
            A DGKK GKPG   P    G  G+ G+VHG+G GM   A       G YG   GGI +Y
Sbjct: 241 LAVDGKKGGKPG--MPQAQDGGSGH-GHVHGEGMGMVRPA-------GPYGA-AGGISAY 300

Query: 301 GGYSGGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGP 360
           GGYSG   GPP    N  +SS G                G+ GYGG      + GGYGGP
Sbjct: 301 GGYSG---GPPAHHMNSTHSSMG---------------VGSAGYGG------HYGGYGGP 360

Query: 361 GSTG-YSGLSAGAAGSLGSAAPGTGSGLYRLPSNS--GGAPSNGFPDSLPYGLSSSSGYP 420
           G TG Y GL  G  G      PGTGSG YR+P +S  GG    G+P+S  YGLSSS+GYP
Sbjct: 361 GGTGVYGGLGGGYGG------PGTGSGQYRMPPSSMPGG---GGYPESGHYGLSSSAGYP 404

Query: 421 NQHHQTTGASAAPRMPTGGMYPNVPPFY 442
            QHHQ  G S  PR+P GGMYPN PP Y
Sbjct: 421 GQHHQAVGTSPVPRVPHGGMYPNGPPNY 404

[Close]

BLAST of Sed0024539 vs. ExPASy Swiss-Prot
Match: Q9LJ04 (RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-46
Identity = 157/409 (38.39%), Postives = 204/409 (49.88%), Query Frame = 0


Query: 10  DENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDAVRSVADHDV 69
           DE+G    + +  +     +  + ++  F  DQL+++L  A   H +VL AV   AD D 
Sbjct: 94  DEDGEGEGEEEEEAAERDADSIQALLNSFPKDQLVELLSAAALSHEDVLTAVHRAADADP 153

Query: 70  AQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLA 129
           A RK+F  GLGWD T E L   FS YGE+E+  V+ D+ATGK KGYGF+ F    GA  A
Sbjct: 154 ALRKIFVHGLGWDATAETLTEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSRRSGARAA 213

Query: 130 LKEPSKTIDGRVTVTQLAAAGNT---GSSLN----------------VGDVSLRKIYVAN 189
           L+EP K I  R T  QLA+ G     G + N                V + + RKI+V+N
Sbjct: 214 LREPQKKIGNRTTACQLASVGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQRKIFVSN 273

Query: 190 VPIDMAADKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIE 249
           V  D+   KLL  F+ YGEIEEGPLG DK TGK +G+ALFVYK  + A+ AL +P K  E
Sbjct: 274 VGADIDPQKLLQFFSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFE 333

Query: 250 GRQVSCKFANDGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLG 309
           G  + C+ A DG K   GG G  G+ G+ G  G   G G        +PG+  G + V+ 
Sbjct: 334 GVVLHCQKAIDGPKPNKGG-GLGGLYGA-GTSGGRKGAGGYGAHSHSLPGAAVGGH-VMP 393

Query: 310 GGIGSYGGYSGGLHGPPQLGYNPPNSSTGGPGLSSM-GSLTHNSLNGTGGYGGGLGSGPY 369
             + S     G   GP   G NP         L+S  G L  N++ G G  G GL   P 
Sbjct: 394 SPVSSLTSLPGVAGGP---GVNPALGQALTAILASQGGGLGLNNILGVGANGSGL---PN 453

Query: 370 GGGYGGPGSTGYSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGF 399
            G   G GS+G  G+  GA G LG    G G G     S   G P   +
Sbjct: 454 PGASAGLGSSGLPGM-PGAGGYLGGYGGGGGYG-----STPPGGPGRNY 487

[Close]

BLAST of Sed0024539 vs. ExPASy Swiss-Prot
Match: O80678 (UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-43
Identity = 134/364 (36.81%), Postives = 180/364 (49.45%), Query Frame = 0


Query: 29  EDARKIIERFTPDQLIDILQDAVSRHSEVLDAVRSVADHDVAQRKLFTRGLGWDTTTEGL 88
           E    ++E F+ DQL+ +L++A  RH +V + +R VAD D+  RK+F  GLGWDT  + L
Sbjct: 85  EPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSL 144

Query: 89  RNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAA 148
            + F  YGE+E+   ++DK +G+SKGYGF+ FK   GA  ALK+P K I  R+T  QLA+
Sbjct: 145 IDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLAS 204

Query: 149 AGNTGSSLNVGDVS-------LRKIYVANVPIDMAADKLLAHFALYGEIEEGPLGFDKQT 208
            G    +  V            RKIYV+NV  D+   KLL  F+ +GEIEEGPLG DK T
Sbjct: 205 IGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKAT 264

Query: 209 GKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFANDGKK----------------- 268
           G+ +G+ALFVY+  E A+ AL +P KT EG  + C  ANDG K                 
Sbjct: 265 GRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSR 324

Query: 269 ---------GKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGG-IG 328
                    G PGG G      +   Q      G  + +     G+  G     G   +G
Sbjct: 325 YQRNDNNGYGAPGGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLNQAFGQALLG 384

Query: 329 SYGGYSGGLHGPPQLGYNPPNSSTGG--PGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGG 357
           + G  S G  G    GY    + + G  PG  +             G GG  G G +G G
Sbjct: 385 TLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGYQTQQPGQGGA-GRGQHGAG 444

[Close]

BLAST of Sed0024539 vs. ExPASy Swiss-Prot
Match: Q9LES2 (UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-41
Identity = 143/394 (36.29%), Postives = 192/394 (48.73%), Query Frame = 0


Query: 29  EDARKIIERFTPDQLIDILQDAVSRHSEVLDAVRSVADHDVAQRKLFTRGLGWDTTTEGL 88
           E  + ++E F+ +Q++ +L++A  +H +V + +R VAD D   RK+F  GLGWDT TE L
Sbjct: 97  EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETL 156

Query: 89  RNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAA 148
              F  YGE+E+   + DK +GKSKGYGF+ +K   GA  ALK+P K I  R+T  QLA+
Sbjct: 157 IEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLAS 216

Query: 149 AGNT--GSSLNVGDVSL-----------RKIYVANVPIDMAADKLLAHFALYGEIEEGPL 208
            G    G+ +    VS            +KIYV+NV  ++   KLL  F+ +GEIEEGPL
Sbjct: 217 KGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPL 276

Query: 209 GFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFANDGKKGKPGGSGPDGV 268
           G DK TG+ +G+ LFVYK +E A+ AL +P KT EG  + C+ A DG K           
Sbjct: 277 GLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPK----------- 336

Query: 269 QGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYSGGLHGPPQLGYNPPN 328
               G Q   H +     +         G YG  GG      G   G+ GP     NP  
Sbjct: 337 ---PGKQQQHHHNPHAYNNPRYQRNDNNG-YGPPGGHGHLMAGNPAGMGGPTAQVINPAI 396

Query: 329 SSTGGPGLSSMGS-LTHNSLNG---TGGYGGGLGSGPYGGGYGGPGSTGYSGLSAGAAGS 388
                  L+S G+ L  N   G    G  G   G  P G G G P   G   ++ G    
Sbjct: 397 GQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNP-GNGVGMPTGYGTQAMAPGTMPG 456

Query: 389 LGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYG 406
            G+  PG   G Y+ P    G  S G     PYG
Sbjct: 457 YGT-QPGLQGG-YQTPQPGQGGTSRGQHGVGPYG 472

[Close]

BLAST of Sed0024539 vs. ExPASy Swiss-Prot
Match: Q13151 (Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens OX=9606 GN=HNRNPA0 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.4e-22
Identity = 103/313 (32.91%), Postives = 139/313 (44.41%), Query Frame = 0


Query: 73  KLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALKE 132
           KLF  GL   T+  GLR  F  +G L + VV+++  T +S+ +GFVT+ +V+ A  A+  
Sbjct: 8   KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67

Query: 133 PSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKLLAHFALYGEIEE 192
               +DG  TV    A     S+       ++K++V  +  D+A   L+ HF+ +G +E+
Sbjct: 68  SPHAVDGN-TVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEK 127

Query: 193 GPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFA-----------ND 252
             +  DKQ+GK RG+    ++  + A  A V     I+G +V  K A             
Sbjct: 128 AEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIYSGGGGG 187

Query: 253 GKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIG--SYGG- 312
           G +   GG G  G  G     G   G G G  S     G  GG Y   GGG G  SYGG 
Sbjct: 188 GSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGS 247

Query: 313 -YSGGLHG-----PPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGG 366
            Y  G  G       Q  Y P  S  GG G             G   +GG   SGPY GG
Sbjct: 248 DYGNGFGGFGSYSQHQSSYGPMKSGGGGGG-------------GGSSWGGRSNSGPYRGG 304

[Close]

BLAST of Sed0024539 vs. ExPASy TrEMBL
Match: A0A6J1FJY4 (UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111446005 PE=4 SV=1)

HSP 1 Score: 728.0 bits (1878), Expect = 2.3e-206
Identity = 387/441 (87.76%), Postives = 402/441 (91.16%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRKMDENG   +DSD+S L LSPEDARKIIERFTPDQLIDILQDAVS HS+VLDA
Sbjct: 1   MDVVKKRKMDENGVPLTDSDDSLLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD DVAQRKLF RGLGWDTTT+GLR LFS+YGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVS+RKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF LYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDP KTIEGRQVSCK+AN
Sbjct: 181 LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGGSGPDGVQGSVGNQGNVHGDG GMPSQAPMPGSMGGQYG   GG+GSYGG+S
Sbjct: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGG-PGGLGSYGGFS 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
           GGLHGPPQLG+N  NSS  GPGLSSMGS T NSLNGTGGYGGGLG GPYGGGYGGPGSTG
Sbjct: 301 GGLHGPPQLGHNTLNSSL-GPGLSSMGSQTQNSLNGTGGYGGGLGGGPYGGGYGGPGSTG 360

Query: 361 YSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTT 420
           +SGLSAG AG  GS+  GTGSGLYRLP NSGG PSNG+PDSLPY LSSSSGY NQH  TT
Sbjct: 361 FSGLSAGPAGGQGSSGAGTGSGLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNQHPHTT 420

Query: 421 GASAAPRMPTGGMYPNVPPFY 442
           G S APR+P GGMYPNVPPFY
Sbjct: 421 GTSPAPRVPPGGMYPNVPPFY 439

[Close]

BLAST of Sed0024539 vs. ExPASy TrEMBL
Match: A0A6J1IT82 (UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111480390 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 8.6e-201
Identity = 381/441 (86.39%), Postives = 396/441 (89.80%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRKMDENG   +DSD+SSL LSPEDARKIIERFTPDQLIDILQDAVS HS+VLDA
Sbjct: 1   MDVVKKRKMDENGVPLTDSDDSSLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD DVAQRKLF RGLGWDTTT+GLR LFS+YGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVS+RKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF LYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDP KTIEGRQVSCK+AN
Sbjct: 181 LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGGSGPDGVQGSVGNQGNVHGDG GMPSQAPMPGSMGGQYG   GG+GSYGG+S
Sbjct: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGG-PGGLGSYGGFS 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
           GGLHGPPQLG+N  NSS  GPGLSSMGS T NSLNGTGGYGGGLG GP    YGGPGSTG
Sbjct: 301 GGLHGPPQLGHNTLNSSL-GPGLSSMGSQTQNSLNGTGGYGGGLGGGP----YGGPGSTG 360

Query: 361 YSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTT 420
           +SGLSAG AG  GS+  GTGS LYRLP NSGG PSNG+PDSLPY LSSSSGY N H  TT
Sbjct: 361 FSGLSAGPAGGQGSSGAGTGSVLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNPHPHTT 420

Query: 421 GASAAPRMPTGGMYPNVPPFY 442
           G S APR+  GGMYPNVPPFY
Sbjct: 421 GTSPAPRVTPGGMYPNVPPFY 435

[Close]

BLAST of Sed0024539 vs. ExPASy TrEMBL
Match: A0A6J1CQ00 (UBP1-associated protein 2C-like OS=Momordica charantia OX=3673 GN=LOC111013083 PE=4 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.7e-196
Identity = 372/441 (84.35%), Postives = 391/441 (88.66%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDVVKKRK+DENG L +DSD+S L LSPEDARKIIERFTPDQLIDILQDAVSRHS+VLDA
Sbjct: 1   MDVVKKRKIDENGVLLADSDHSFLKLSPEDARKIIERFTPDQLIDILQDAVSRHSDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD DV+QRKLF RGLGWDT+TEGLR LFS YGELEEAVVILDKATGKSKGYGFVTF
Sbjct: 61  VRSVADPDVSQRKLFIRGLGWDTSTEGLRTLFSAYGELEEAVVILDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGS+ N  DVS+RKIYVANVPIDMAADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAADVSMRKIYVANVPIDMAADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF LYGEIEEGPLGFDKQTGKCRGYALFVYKK EGAQAALVDP KTIEGRQVSCKFAN
Sbjct: 181 LAHFGLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIEGRQVSCKFAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGG+GPDG Q SVG+QG+ HGDG GMPSQAPMPGSMGG YG   GGIGSYGG++
Sbjct: 241 DGKKGKPGGAGPDGAQASVGSQGSAHGDGVGMPSQAPMPGSMGGHYGG-PGGIGSYGGFT 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
           GGLHGPPQLG+NP NSS  GPGL SM +   NSLNGTGGYGGGLG GPY GGYGGPG + 
Sbjct: 301 GGLHGPPQLGHNPLNSSLAGPGLPSMSNQAQNSLNGTGGYGGGLG-GPYSGGYGGPGPSS 360

Query: 361 YSGLSAGAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPNQHHQTT 420
           +SGL AG AG LG AA GTGSGLYRLP NS G PSNG+ DSLPY L SSSGYPNQH Q T
Sbjct: 361 FSGLGAGTAGGLGGAAAGTGSGLYRLPPNSAGMPSNGYSDSLPYSL-SSSGYPNQHQQ-T 420

Query: 421 GASAAPRMPTGGMYPNVPPFY 442
           G S APR+P GGMYPNVPPFY
Sbjct: 421 GTSPAPRVPPGGMYPNVPPFY 437

[Close]

BLAST of Sed0024539 vs. ExPASy TrEMBL
Match: A0A6P4AU64 (UBP1-associated protein 2C OS=Ziziphus jujuba OX=326968 GN=LOC107432547 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 3.1e-158
Identity = 323/457 (70.68%), Postives = 362/457 (79.21%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MD+ KKRKM+ENGA   D+D S L L+PEDARKIIERFTPDQLI+ILQ+AV+ H++VL+A
Sbjct: 1   MDLTKKRKMEENGA--GDADPSVLKLTPEDARKIIERFTPDQLIEILQEAVAHHADVLEA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRSVAD D +QRKLF RGLGWDTTTEGLR LFS YGELEEAVVILDK TGKSKGYGFVTF
Sbjct: 61  VRSVADPDTSQRKLFIRGLGWDTTTEGLRALFSAYGELEEAVVILDKTTGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVG---DVSLRKIYVANVPIDMAA 180
           +HVDGALLALKEPSK IDGR+TVTQLAAAGN+G++ N     DVSLRKIYVANVP DM A
Sbjct: 121 RHVDGALLALKEPSKKIDGRMTVTQLAAAGNSGANTNSNAAVDVSLRKIYVANVPYDMPA 180

Query: 181 DKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCK 240
           DKLLAHF+LYGEIEEGPLGFDKQTGKCRGYALFVYK  EGAQAALVDP KTIEGRQ++CK
Sbjct: 181 DKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKTPEGAQAALVDPVKTIEGRQLTCK 240

Query: 241 FANDGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYG 300
            A DGKKGK  GSG DG+Q  VG  GN HGDG G+   + MPGS+GGQYG    GIGSYG
Sbjct: 241 LAIDGKKGKQ-GSGADGIQAPVGGPGNAHGDGMGLAPPSSMPGSIGGQYGG-PAGIGSYG 300

Query: 301 GYSGGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPG 360
           G+SGGL GPP +G++P NSS GGPGLSS+G+   +SL G GGYG GLG GPY GGYGGPG
Sbjct: 301 GFSGGLQGPP-MGHHPLNSSIGGPGLSSVGNQAPSSLGGAGGYGSGLG-GPY-GGYGGPG 360

Query: 361 STGYSGLSAG---------AAGSLGSAAPGTGSG----LYRLPSNSGGAPSNGFPDSLPY 420
           S G+ GL +G         AAG LG A  G G G    LYRLP +SGG PS+G+PD+  Y
Sbjct: 361 SAGFGGLGSGGAGGGLAGSAAGGLGGAGGGAGGGGGSSLYRLPPSSGGIPSSGYPDTGHY 420

Query: 421 GLSSSSGYPNQHHQTTGASAAPRMPTGGMYPNVPPFY 442
            +SSSS Y  QHHQ  G S  PR+P GGMYP  PP+Y
Sbjct: 421 NMSSSSAYQGQHHQPAGTSPVPRVPPGGMYP--PPYY 448

[Close]

BLAST of Sed0024539 vs. ExPASy TrEMBL
Match: A0A0A0KYY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083660 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.5e-157
Identity = 322/447 (72.04%), Postives = 358/447 (80.09%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSLNLSPEDARKIIERFTPDQLIDILQDAVSRHSEVLDA 60
           MDV KKR+MDENG  SS+S  S   ++PEDARKII+RFTPDQLIDILQDAVSRH +VLDA
Sbjct: 1   MDVTKKRRMDENGVDSSESSFS--RITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDA 60

Query: 61  VRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGFVTF 120
           VRS+AD DV+QRKLF RGL  DT+TEGLR+LFS YGELEEAVVI+DKATGKSKGYGFVTF
Sbjct: 61  VRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTF 120

Query: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAADKL 180
           KHVDGALLALKEPSKTIDGRVTVTQLAA G +G + N  D+SLRKIYVANVP+DM ADKL
Sbjct: 121 KHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKL 180

Query: 181 LAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFAN 240
           LAHF+LYGEIEEGPLGFDKQTGKCRGYALFVYKK EGAQAALVDP KTI+GRQ+SCKFAN
Sbjct: 181 LAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFAN 240

Query: 241 DGKKGKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYS 300
           DGKKGKPGG GPDG Q     QGNVHGDG  M   + MPGS GGQYG   GG+GSYGG+S
Sbjct: 241 DGKKGKPGG-GPDGNQTQGAGQGNVHGDGMPMAPPSAMPGS-GGQYGG-PGGMGSYGGFS 300

Query: 301 GGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGPGSTG 360
            GL G   L ++P NSS  GPGLSS+G    +SL  +GGYGG    GPYGGGYGGPGS  
Sbjct: 301 SGLQGAQPLAHHPLNSSM-GPGLSSVGGQAPSSLGSSGGYGG----GPYGGGYGGPGSI- 360

Query: 361 YSGLSA------GAAGSLGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYGLSSSSGYPN 420
           Y G+ +      G+ G LG A  G  S LYRLP +S G PS G+PDS  Y +SS+SG+PN
Sbjct: 361 YGGMGSVGGGLGGSGGGLGGA--GGASSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPN 420

Query: 421 QHHQTTGASAAPRMPTGGMYPNVPPFY 442
           QHHQ  G S APR+P GGMYPNVPP+Y
Sbjct: 421 QHHQPAGTSPAPRVPPGGMYPNVPPYY 434

[Close]

BLAST of Sed0024539 vs. TAIR 10
Match: AT3G15010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 439.1 bits (1128), Expect = 4.2e-123
Identity = 266/448 (59.38%), Postives = 312/448 (69.64%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSL---NLSPEDARKIIERFTPDQLIDILQDAVSRHSEV 60
           MD++KKRK+DENG   + +   ++    LSP+DARKIIERFT DQL+D+LQ+A+ RH +V
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  LDAVRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGF 120
           L++VR  AD D++QRKLF RGL  DTTTEGLR+LFS YG+LEEA+VILDK TGKSKGYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 VTFKHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAA 180
           VTF HVDGALLALKEPSK IDGRVTVTQLAA+GN G+   + D+S+RKIYVANVP DM A
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 DKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCK 240
           D+LL HF  YG++EEGPLGFDK TGK RG+ALFVYK AEGAQAAL DP K I+G+ ++CK
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 FANDGKK-GKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSY 300
            A DGKK GKPG   P    G  G+ G+VHG+G GM   A       G YG   GGI +Y
Sbjct: 241 LAVDGKKGGKPG--MPQAQDGGSGH-GHVHGEGMGMVRPA-------GPYGA-AGGISAY 300

Query: 301 GGYSGGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGP 360
           GGYSG   GPP    N  +SS G                G+ GYGG      + GGYGGP
Sbjct: 301 GGYSG---GPPAHHMNSTHSSMG---------------VGSAGYGG------HYGGYGGP 360

Query: 361 GSTG-YSGLSAGAAGSLGSAAPGTGSGLYRLPSNS--GGAPSNGFPDSLPYGLSSSSGYP 420
           G TG Y GL  G  G      PGTGSG YR+P +S  GG    G+P+S  YGLSSS+GYP
Sbjct: 361 GGTGVYGGLGGGYGG------PGTGSGQYRMPPSSMPGG---GGYPESGHYGLSSSAGYP 404

Query: 421 NQHHQTTGASAAPRMPTGGMYPNVPPFY 442
            QHHQ  G S  PR+P GGMYPN PP Y
Sbjct: 421 GQHHQAVGTSPVPRVPHGGMYPNGPPNY 404

[Close]

BLAST of Sed0024539 vs. TAIR 10
Match: AT3G15010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 439.1 bits (1128), Expect = 4.2e-123
Identity = 266/448 (59.38%), Postives = 312/448 (69.64%), Query Frame = 0


Query: 1   MDVVKKRKMDENGALSSDSDNSSL---NLSPEDARKIIERFTPDQLIDILQDAVSRHSEV 60
           MD++KKRK+DENG   + +   ++    LSP+DARKIIERFT DQL+D+LQ+A+ RH +V
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  LDAVRSVADHDVAQRKLFTRGLGWDTTTEGLRNLFSVYGELEEAVVILDKATGKSKGYGF 120
           L++VR  AD D++QRKLF RGL  DTTTEGLR+LFS YG+LEEA+VILDK TGKSKGYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 VTFKHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSSLNVGDVSLRKIYVANVPIDMAA 180
           VTF HVDGALLALKEPSK IDGRVTVTQLAA+GN G+   + D+S+RKIYVANVP DM A
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 DKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCK 240
           D+LL HF  YG++EEGPLGFDK TGK RG+ALFVYK AEGAQAAL DP K I+G+ ++CK
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 FANDGKK-GKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSY 300
            A DGKK GKPG   P    G  G+ G+VHG+G GM   A       G YG   GGI +Y
Sbjct: 241 LAVDGKKGGKPG--MPQAQDGGSGH-GHVHGEGMGMVRPA-------GPYGA-AGGISAY 300

Query: 301 GGYSGGLHGPPQLGYNPPNSSTGGPGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGGYGGP 360
           GGYSG   GPP    N  +SS G                G+ GYGG      + GGYGGP
Sbjct: 301 GGYSG---GPPAHHMNSTHSSMG---------------VGSAGYGG------HYGGYGGP 360

Query: 361 GSTG-YSGLSAGAAGSLGSAAPGTGSGLYRLPSNS--GGAPSNGFPDSLPYGLSSSSGYP 420
           G TG Y GL  G  G      PGTGSG YR+P +S  GG    G+P+S  YGLSSS+GYP
Sbjct: 361 GGTGVYGGLGGGYGG------PGTGSGQYRMPPSSMPGG---GGYPESGHYGLSSSAGYP 404

Query: 421 NQHHQTTGASAAPRMPTGGMYPNVPPFY 442
            QHHQ  G S  PR+P GGMYPN PP Y
Sbjct: 421 GQHHQAVGTSPVPRVPHGGMYPNGPPNY 404

[Close]

BLAST of Sed0024539 vs. TAIR 10
Match: AT2G41060.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-44
Identity = 134/364 (36.81%), Postives = 180/364 (49.45%), Query Frame = 0


Query: 29  EDARKIIERFTPDQLIDILQDAVSRHSEVLDAVRSVADHDVAQRKLFTRGLGWDTTTEGL 88
           E    ++E F+ DQL+ +L++A  RH +V + +R VAD D+  RK+F  GLGWDT  + L
Sbjct: 85  EPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSL 144

Query: 89  RNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAA 148
            + F  YGE+E+   ++DK +G+SKGYGF+ FK   GA  ALK+P K I  R+T  QLA+
Sbjct: 145 IDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLAS 204

Query: 149 AGNTGSSLNVGDVS-------LRKIYVANVPIDMAADKLLAHFALYGEIEEGPLGFDKQT 208
            G    +  V            RKIYV+NV  D+   KLL  F+ +GEIEEGPLG DK T
Sbjct: 205 IGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKAT 264

Query: 209 GKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFANDGKK----------------- 268
           G+ +G+ALFVY+  E A+ AL +P KT EG  + C  ANDG K                 
Sbjct: 265 GRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSR 324

Query: 269 ---------GKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGG-IG 328
                    G PGG G      +   Q      G  + +     G+  G     G   +G
Sbjct: 325 YQRNDNNGYGAPGGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLNQAFGQALLG 384

Query: 329 SYGGYSGGLHGPPQLGYNPPNSSTGG--PGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGG 357
           + G  S G  G    GY    + + G  PG  +             G GG  G G +G G
Sbjct: 385 TLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGYQTQQPGQGGA-GRGQHGAG 444

[Close]

BLAST of Sed0024539 vs. TAIR 10
Match: AT2G41060.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-44
Identity = 134/364 (36.81%), Postives = 180/364 (49.45%), Query Frame = 0


Query: 29  EDARKIIERFTPDQLIDILQDAVSRHSEVLDAVRSVADHDVAQRKLFTRGLGWDTTTEGL 88
           E    ++E F+ DQL+ +L++A  RH +V + +R VAD D+  RK+F  GLGWDT  + L
Sbjct: 85  EPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSL 144

Query: 89  RNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAA 148
            + F  YGE+E+   ++DK +G+SKGYGF+ FK   GA  ALK+P K I  R+T  QLA+
Sbjct: 145 IDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLAS 204

Query: 149 AGNTGSSLNVGDVS-------LRKIYVANVPIDMAADKLLAHFALYGEIEEGPLGFDKQT 208
            G    +  V            RKIYV+NV  D+   KLL  F+ +GEIEEGPLG DK T
Sbjct: 205 IGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKAT 264

Query: 209 GKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFANDGKK----------------- 268
           G+ +G+ALFVY+  E A+ AL +P KT EG  + C  ANDG K                 
Sbjct: 265 GRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSR 324

Query: 269 ---------GKPGGSGPDGVQGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGG-IG 328
                    G PGG G      +   Q      G  + +     G+  G     G   +G
Sbjct: 325 YQRNDNNGYGAPGGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLNQAFGQALLG 384

Query: 329 SYGGYSGGLHGPPQLGYNPPNSSTGG--PGLSSMGSLTHNSLNGTGGYGGGLGSGPYGGG 357
           + G  S G  G    GY    + + G  PG  +             G GG  G G +G G
Sbjct: 385 TLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGYQTQQPGQGGA-GRGQHGAG 444

[Close]

BLAST of Sed0024539 vs. TAIR 10
Match: AT3G56860.3 (UBP1-associated protein 2A )

HSP 1 Score: 170.2 bits (430), Expect = 3.6e-42
Identity = 143/394 (36.29%), Postives = 192/394 (48.73%), Query Frame = 0


Query: 29  EDARKIIERFTPDQLIDILQDAVSRHSEVLDAVRSVADHDVAQRKLFTRGLGWDTTTEGL 88
           E  + ++E F+ +Q++ +L++A  +H +V + +R VAD D   RK+F  GLGWDT TE L
Sbjct: 97  EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETL 156

Query: 89  RNLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALKEPSKTIDGRVTVTQLAA 148
              F  YGE+E+   + DK +GKSKGYGF+ +K   GA  ALK+P K I  R+T  QLA+
Sbjct: 157 IEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLAS 216

Query: 149 AGNT--GSSLNVGDVSL-----------RKIYVANVPIDMAADKLLAHFALYGEIEEGPL 208
            G    G+ +    VS            +KIYV+NV  ++   KLL  F+ +GEIEEGPL
Sbjct: 217 KGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPL 276

Query: 209 GFDKQTGKCRGYALFVYKKAEGAQAALVDPAKTIEGRQVSCKFANDGKKGKPGGSGPDGV 268
           G DK TG+ +G+ LFVYK +E A+ AL +P KT EG  + C+ A DG K           
Sbjct: 277 GLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPK----------- 336

Query: 269 QGSVGNQGNVHGDGAGMPSQAPMPGSMGGQYGVLGGGIGSYGGYSGGLHGPPQLGYNPPN 328
               G Q   H +     +         G YG  GG      G   G+ GP     NP  
Sbjct: 337 ---PGKQQQHHHNPHAYNNPRYQRNDNNG-YGPPGGHGHLMAGNPAGMGGPTAQVINPAI 396

Query: 329 SSTGGPGLSSMGS-LTHNSLNG---TGGYGGGLGSGPYGGGYGGPGSTGYSGLSAGAAGS 388
                  L+S G+ L  N   G    G  G   G  P G G G P   G   ++ G    
Sbjct: 397 GQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNP-GNGVGMPTGYGTQAMAPGTMPG 456

Query: 389 LGSAAPGTGSGLYRLPSNSGGAPSNGFPDSLPYG 406
            G+  PG   G Y+ P    G  S G     PYG
Sbjct: 457 YGT-QPGLQGG-YQTPQPGQGGTSRGQHGVGPYG 472

The following BLAST results are available for this feature:

BLAST of Sed0024539 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940378.1	4.8e-206	87.76	UBP1-associated protein 2C-like [Cucurbita moschata] >XP_022940379.1 UBP1-associ...	[more]
XP_023524648.1	1.8e-205	87.53	UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo] >XP_023524649.1 UBP...	[more]
KAG6607907.1	5.3e-205	87.53	UBP1-associated protein 2C, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_038899568.1	1.1e-202	86.26	UBP1-associated protein 2C-like [Benincasa hispida]	[more]
XP_022981162.1	1.8e-200	86.39	UBP1-associated protein 2C-like [Cucurbita maxima] >XP_022981163.1 UBP1-associat...	[more]

BLAST of Sed0024539 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA4	5.9e-122	59.38	UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1	[more]
Q9LJ04	1.8e-46	38.39	RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=...	[more]
O80678	1.4e-43	36.81	UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1	[more]
Q9LES2	5.1e-41	36.29	UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1	[more]
Q13151	2.4e-22	32.91	Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens OX=9606 GN=HNRNPA0 PE...	[more]

BLAST of Sed0024539 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJY4	2.3e-206	87.76	UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111446005 PE...	[more]
A0A6J1IT82	8.6e-201	86.39	UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111480390 PE=4...	[more]
A0A6J1CQ00	3.7e-196	84.35	UBP1-associated protein 2C-like OS=Momordica charantia OX=3673 GN=LOC111013083 P...	[more]
A0A6P4AU64	3.1e-158	70.68	UBP1-associated protein 2C OS=Ziziphus jujuba OX=326968 GN=LOC107432547 PE=4 SV=...	[more]
A0A0A0KYY6	1.5e-157	72.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083660 PE=4 SV=1	[more]

BLAST of Sed0024539 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15010.1	4.2e-123	59.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G15010.2	4.2e-123	59.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.1	1.0e-44	36.81	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.2	1.0e-44	36.81	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	3.6e-42	36.29	UBP1-associated protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 165..237 e-value: 6.1E-10 score: 49.0 coord: 73..145 e-value: 1.1E-17 score: 74.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 74..141 e-value: 4.8E-14 score: 52.0 coord: 166..234 e-value: 1.2E-6 score: 28.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 72..158 score: 15.033368
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 164..241 score: 12.952609
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 160..275 e-value: 4.1E-16 score: 61.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 48..159 e-value: 6.0E-20 score: 73.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..441
None	No IPR available	PANTHER	PTHR48024:SF25	UBP1-ASSOCIATED PROTEIN 2C	coord: 1..408
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 1..408
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 72..147 e-value: 4.80637E-38 score: 130.813
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 164..239 e-value: 4.42342E-29 score: 106.931
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 72..151
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 159..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024539.1	Sed0024539.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding