Sed0024529 (gene) Chayote v1

Overview


Name	Sed0024529
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DBD_Tnp_Mut domain-containing protein
Location	LG04: 11494790 .. 11497281 (-)
RNA-Seq Expression	Sed0024529
Synteny	Sed0024529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTAGTTTGCTTATATTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGGTTATGGCCAAAGTACCCCCTTTTGAAATTTTGGAAGATAAAGGCGTGGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGAACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTATAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTATTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAGTTGTTTTAAATACTTGGCTGTGAAAAATAATTTTGAGTTCAGGACTCCTAGATCCAGCAATCAAGCGGTTGAGTTTCAATGTTGCAAAGTGATTGTTTATGGAATGTTAAGGCATCTCGTTTCAAGGATAGTGATTTATGGATCCTTAGGAAGTACGTTTCTATTCATAATTGTCCTTTGAATAGTATTCAAACATCGCATAGGCAAGCATCATCTATTTTAATCGGGGATTCTTTAAAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTTTGACACCGAAAGAAATTAAGGTTAAAGCGCGTTCAAAGCTTGGTGTTAGTGTTAGTTATGCAAAAGCATATAGGGCAAAAGAACACATCATGAAGGTGTTGAAGGGCGATGCAGCTGAATCCTATTCCTTGATTCCAAAGTTTTTCAAGAAGTTAGAAGAAATGAATCCAGGTTAGTTTAACTTATTGGTTTCTATCACTCGCTTCTGTCTCTTTGAATTCTTTTTAGGTTGATTTTTTGTATGCAGAAACCTTCTATCACCTATGCAGAAACCTTCTATCACTTATGCATAAACCTTCTATCACCTATGCATAAACCTTCTATCACCTTTGTAGAACCTTCTATCACTTATGCAGAAACTTCCATCACTTATGCAAAAATCTTCTATCATTTATGCAGAAACCTATCACTCACTTCTGAATGAGCACTATTAATCAAACATTGAAGTCTATCACTCACTCACTCTTAAAATTTATTTTTGCAGGAACATACACAACATTTGAAACCAATGATGATGGACATTTCAAATATTTTTTTATGGCCATGGGTGCTTCTATTGAAGGTTGGTTGTTTTGTAGGCCTAATATATCTGTGGATGGGACTTTCTTGAAGGGAAAATTTGGAGGTATTTTGCTAACAGCCTCAACTATGGATGGTAATAATCAAATATTTCCACTTGCTTTTAGTATTTTTGATTCAGAGAATGATGCTTCTTGGCTTTGGTTTTTTGAGAATATGAAGAAATGTTTTGGACATCCATAAAATTTGGTTTTCATGTCGAGACAGGCATTTGAGCATTCTAAAAGTTTTTTCGATTGTTTATCCAAATGTTGAATCTTTGTATTTGTATGCAACATTTCTTTGATGAACATTAAGCTACACTTTAAAGGATCTGTGATAGATAAGATTTTTAAAACATGCGCAAAGGCTTATACTGATTGAAGATTTCGAATATAATATGAGATTGTTGGAGTCCATACACCCCACAATTCGTCAAGATTTGTTTAATATTGGTTATGCAAAGTGGGAGCGTGCATATTCTAGAAAAAAGAAGATGAGAATGATGACGTCAAATAGTTTGAAAGCATAAATTCACTTCTCAAAGAACCTAGAAATTATCATGTGGCAATGCTTCTTGATTCTACTAGAGACACATTGCAATCATGGTTTTTTGACCGAAGGAAAGCCGCAACTTCTATGACTTGATTTTGTCTTCTTGGGCGGAAAAGGTTTTACTGAAAAAATCATGACGCATCAAGAACTTTCAAAGTAAGGTTTCAATTTACATTTCTTTCAATTAGGCGAAATATTCTATCACTATGCAAGAAGCTTTCTATCACCTATGCAAAAAGCTTCTATCACCTCCGCAGAAACCTTCTATCATTTAGGCGAAATATTCTATACGCCTTCTATCACTTAGCGAAAAACCTTCTATTGTATATACGTTGTCTATACATAAATATTTTATCAACAATGCATACACCTTCTATCACATATGCATAAACTTATTCAAATATATTTTGTCTTGTGTTTTGTCTTAAATCGTGATTAGTTTAACTTTTGTAGGTTGATTCTATCAAAGCAATGCAGAGCATAAAGTAATTGATGAGACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTCTTTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

mRNA sequence

ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGGCGTGGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGAACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTATAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTATTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTCTTTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

Coding sequence (CDS)

ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGGCGTGGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGAACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTATAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTATTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTCTTTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

Protein sequence

MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKNNGTRHPLVVDAKNFYLEGTSSSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIRLDCVFNVKDTFASKEVLCNKSFLVNLDTRSCTCRVWDLDEIPCSHALLCYTCTRFESLYFCV

Homology

[Close]

BLAST of Sed0024529 vs. NCBI nr
Match: TYK14543.1 (uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-17
Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKN 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M F+        LEDK V WFL+LVK 
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFKN-------LEDKDVTWFLSLVKG 60

Query: 61  NGTRHPLVVDA----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR- 120
             TRHPLV  A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI  
Sbjct: 61  QITRHPLVAHAIAHVSNMDLEWSSVVDSEMDNLCSLLPSSSIDDD------FQILTDIHV 120

Query: 121 --LDCVFNV--KDTFASKEVLCNKSF 136
             L   F++  KD FASKE+L +KSF
Sbjct: 121 SSLSSTFDLKEKDMFASKELL-SKSF 132

[Close]

BLAST of Sed0024529 vs. NCBI nr
Match: KAA0046135.1 (uncharacterized protein E6C27_scaffold157G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 6.3e-16
Identity = 71/176 (40.34%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFENFVSLILREVRFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK   TRHPLV  A     N  LE +S   S +
Sbjct: 61  ILDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF 136
            N   L+ SS+IDD+      F ++ DI    L   FN+  KD FASKE+L +KSF
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFNLKEKDMFASKELL-SKSF 169

[Close]

BLAST of Sed0024529 vs. NCBI nr
Match: TYK23827.1 (MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 8.2e-16
Identity = 72/176 (40.91%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETF--------------------- 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+MSFE F                     
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFGSLILREVRFDASPSSIQLSI 60

Query: 61  ---------IPPFEILEDKGVDWFLTLVKNNGTRHPLV----VDAKNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK   TRHPLV    V   N  LE +S   S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF 136
            N   L+SSS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Sbjct: 121 DNLCSLLSSSSIDDD------FQILTDIHVSSLSSTFDLKEKDMFASKELL-SKSF 169

[Close]

BLAST of Sed0024529 vs. NCBI nr
Match: TYK23827.1 (MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-04
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 133 KSFLVNLDTRSCTCRVWDLDEIPCSHAL 161
           K F+V LD +SCTCRVWDLDEIPC+HAL
Sbjct: 589 KQFIVRLDCKSCTCRVWDLDEIPCAHAL 616

HSP 2 Score: 94.4 bits (233), Expect = 1.1e-15
Identity = 71/176 (40.34%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------- 60
           M K+ IVVFH GQW+   SY  YK  GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTIGVLVDEMMSFENFVSLILREVRFDASPSSIQLSI 60

Query: 61  -----------PFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK + TRHPLV  A     N  LE +S   S +
Sbjct: 61  LLDYGITDIQNVVQIQEDKDVTWFLSLVKGHITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF 136
            N   L+ SS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDLKEKDMFASKELL-SKSF 169

[Close]

BLAST of Sed0024529 vs. NCBI nr
Match: KAA0066702.1 (uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-15
Identity = 70/176 (39.77%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------- 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFEIFVSLILREVRFDASPSSIQLSI 60

Query: 61  -----------PFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK + TRHPLV  A     N  LE +S   S +
Sbjct: 61  LLDYGITDIQNVVQIQEDKDVTWFLSLVKGHITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNVK--DTFASKEVLCNKSF 136
            N   L+ SS+IDD+      F ++ DI    L   F++K  D FASKE+L +KSF
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDLKENDMFASKELL-SKSF 169

[Close]

BLAST of Sed0024529 vs. ExPASy TrEMBL
Match: A0A5D3CRP1 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00250 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-17
Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKN 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M F+        LEDK V WFL+LVK 
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFKN-------LEDKDVTWFLSLVKG 60

Query: 61  NGTRHPLVVDA----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR- 120
             TRHPLV  A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI  
Sbjct: 61  QITRHPLVAHAIAHVSNMDLEWSSVVDSEMDNLCSLLPSSSIDDD------FQILTDIHV 120

Query: 121 --LDCVFNV--KDTFASKEVLCNKSF 136
             L   F++  KD FASKE+L +KSF
Sbjct: 121 SSLSSTFDLKEKDMFASKELL-SKSF 132

[Close]

BLAST of Sed0024529 vs. ExPASy TrEMBL
Match: A0A5A7TXI0 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00750 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.0e-16
Identity = 71/176 (40.34%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFENFVSLILREVRFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK   TRHPLV  A     N  LE +S   S +
Sbjct: 61  ILDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF 136
            N   L+ SS+IDD+      F ++ DI    L   FN+  KD FASKE+L +KSF
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFNLKEKDMFASKELL-SKSF 169

[Close]

BLAST of Sed0024529 vs. ExPASy TrEMBL
Match: A0A5D3DJR8 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00300 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.0e-16
Identity = 72/176 (40.91%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETF--------------------- 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+MSFE F                     
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFGSLILREVRFDASPSSIQLSI 60

Query: 61  ---------IPPFEILEDKGVDWFLTLVKNNGTRHPLV----VDAKNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK   TRHPLV    V   N  LE +S   S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF 136
            N   L+SSS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Sbjct: 121 DNLCSLLSSSSIDDD------FQILTDIHVSSLSSTFDLKEKDMFASKELL-SKSF 169

[Close]

BLAST of Sed0024529 vs. ExPASy TrEMBL
Match: A0A5D3DJR8 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00300 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 133 KSFLVNLDTRSCTCRVWDLDEIPCSHAL 161
           K F+V LD +SCTCRVWDLDEIPC+HAL
Sbjct: 589 KQFIVRLDCKSCTCRVWDLDEIPCAHAL 616

HSP 2 Score: 94.4 bits (233), Expect = 5.2e-16
Identity = 71/176 (40.34%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------- 60
           M K+ IVVFH GQW+   SY  YK  GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTIGVLVDEMMSFENFVSLILREVRFDASPSSIQLSI 60

Query: 61  -----------PFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK + TRHPLV  A     N  LE +S   S +
Sbjct: 61  LLDYGITDIQNVVQIQEDKDVTWFLSLVKGHITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF 136
            N   L+ SS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDLKEKDMFASKELL-SKSF 169

[Close]

BLAST of Sed0024529 vs. ExPASy TrEMBL
Match: A0A5A7VEB2 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00350 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15
Identity = 70/176 (39.77%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------- 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFEIFVSLILREVRFDASPSSIQLSI 60

Query: 61  -----------PFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVV 120
                        +I EDK V WFL+LVK + TRHPLV  A     N  LE +S   S +
Sbjct: 61  LLDYGITDIQNVVQIQEDKDVTWFLSLVKGHITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNVK--DTFASKEVLCNKSF 136
            N   L+ SS+IDD+      F ++ DI    L   F++K  D FASKE+L +KSF
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDLKENDMFASKELL-SKSF 169

The following BLAST results are available for this feature:

BLAST of Sed0024529 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14543.1	4.3e-17	46.58	uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa]	[more]
KAA0046135.1	6.3e-16	40.34	uncharacterized protein E6C27_scaffold157G00750 [Cucumis melo var. makuwa]	[more]
TYK23827.1	8.2e-16	40.91	MuDR family transposase [Cucumis melo var. makuwa]	[more]
TYK23827.1	4.2e-04	78.57	MuDR family transposase [Cucumis melo var. makuwa]	[more]
KAA0066702.1	2.4e-15	39.77	uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0024529 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0024529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CRP1	2.1e-17	46.58	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7TXI0	3.0e-16	40.34	DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3DJR8	4.0e-16	40.91	MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DJR8	2.0e-04	78.57	MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VEB2	1.2e-15	39.77	DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Sed0024529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 142..169 e-value: 9.1E-5 score: 31.8
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 135..160 e-value: 8.8E-7 score: 28.5
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 135..167 score: 9.594059

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024529.1	Sed0024529.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding