![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0024312 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCATTCCATTGTCTAAATTAAATCTCCCCATAGAGAAAACCTAAGTATTATATTTGTCTTTCAATCCCTTCCTTTCTCCATTCCCCTCCTCCTATAACACATCCAAAAACTCCCTCCTCAAAATACATCTCTATGAACCAAAATCTCCTCCCATGGACCCTGACCATATCCCCACCACCATCACCACAACCGTAGATCAAAACTCGAAAACAACCATTGAAGAGCCTGATCAAGCCAACGACATGGGCACTGGCCGCTCCTACGAGTGCGTATATTGCAAACGAGGCTTCACAACAGCTCAAGCCCTAGGCGGGCACATGAACATCCATCGCAAAGACCGCGTTAAAACTAAGCCTAATGCTACCAATCATCCCTCCAAGCCCGAACACTTAAGCCACCACCCTCTACCCCCATCAACAACAACAACACTAATCTCAACATCCCATCACCAATCTTTTCAAACCTATTTTCCTACTTCTTCCACTACTCCATCCTATGATCATAACAACCCCATCGAGAATTGGAAAAATATTTCCCTTGCTTCCCGATTGCCAAATCCTAATCTGATCGATCTTCACGATAAGAGATCAGGCAGTAATGATAACGCGGACGATGATGATAATAACGAAGAACTTGATCTTGAGCTACGACTTGGACACGATCGGTAGTAGTCTCAAACGTATATTTTTTCATTGAAGGTTATGGAATATAATTTATGTGTGCATTTATATATATTATATTTATGATTTTTTTTTTTTGTATGTATAGAGATGGGATTTAATATTTTCCTTTTTGATGAAGAGAGAGAATTATTAATTAGATATTGGAATAAGGAAAAGCAATACAAATGGGG CATCATTCCATTGTCTAAATTAAATCTCCCCATAGAGAAAACCTAAGTATTATATTTGTCTTTCAATCCCTTCCTTTCTCCATTCCCCTCCTCCTATAACACATCCAAAAACTCCCTCCTCAAAATACATCTCTATGAACCAAAATCTCCTCCCATGGACCCTGACCATATCCCCACCACCATCACCACAACCGTAGATCAAAACTCGAAAACAACCATTGAAGAGCCTGATCAAGCCAACGACATGGGCACTGGCCGCTCCTACGAGTGCGTATATTGCAAACGAGGCTTCACAACAGCTCAAGCCCTAGGCGGGCACATGAACATCCATCGCAAAGACCGCGTTAAAACTAAGCCTAATGCTACCAATCATCCCTCCAAGCCCGAACACTTAAGCCACCACCCTCTACCCCCATCAACAACAACAACACTAATCTCAACATCCCATCACCAATCTTTTCAAACCTATTTTCCTACTTCTTCCACTACTCCATCCTATGATCATAACAACCCCATCGAGAATTGGAAAAATATTTCCCTTGCTTCCCGATTGCCAAATCCTAATCTGATCGATCTTCACGATAAGAGATCAGGCAGTAATGATAACGCGGACGATGATGATAATAACGAAGAACTTGATCTTGAGCTACGACTTGGACACGATCGGTAGTAGTCTCAAACGTATATTTTTTCATTGAAGGTTATGGAATATAATTTATGTGTGCATTTATATATATTATATTTATGATTTTTTTTTTTTGTATGTATAGAGATGGGATTTAATATTTTCCTTTTTGATGAAGAGAGAGAATTATTAATTAGATATTGGAATAAGGAAAAGCAATACAAATGGGG ATGGACCCTGACCATATCCCCACCACCATCACCACAACCGTAGATCAAAACTCGAAAACAACCATTGAAGAGCCTGATCAAGCCAACGACATGGGCACTGGCCGCTCCTACGAGTGCGTATATTGCAAACGAGGCTTCACAACAGCTCAAGCCCTAGGCGGGCACATGAACATCCATCGCAAAGACCGCGTTAAAACTAAGCCTAATGCTACCAATCATCCCTCCAAGCCCGAACACTTAAGCCACCACCCTCTACCCCCATCAACAACAACAACACTAATCTCAACATCCCATCACCAATCTTTTCAAACCTATTTTCCTACTTCTTCCACTACTCCATCCTATGATCATAACAACCCCATCGAGAATTGGAAAAATATTTCCCTTGCTTCCCGATTGCCAAATCCTAATCTGATCGATCTTCACGATAAGAGATCAGGCAGTAATGATAACGCGGACGATGATGATAATAACGAAGAACTTGATCTTGAGCTACGACTTGGACACGATCGGTAG MDPDHIPTTITTTVDQNSKTTIEEPDQANDMGTGRSYECVYCKRGFTTAQALGGHMNIHRKDRVKTKPNATNHPSKPEHLSHHPLPPSTTTTLISTSHHQSFQTYFPTSSTTPSYDHNNPIENWKNISLASRLPNPNLIDLHDKRSGSNDNADDDDNNEELDLELRLGHDR Homology
BLAST of Sed0024312 vs. NCBI nr
Match: KAG6606387.1 (Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48 Identity = 126/206 (61.17%), Postives = 138/206 (66.99%), Query Frame = 0
BLAST of Sed0024312 vs. NCBI nr
Match: XP_023532933.1 (transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.8 bits (512), Expect = 4.7e-48 Identity = 127/211 (60.19%), Postives = 140/211 (66.35%), Query Frame = 0
BLAST of Sed0024312 vs. NCBI nr
Match: XP_022995697.1 (transcriptional regulator SUPERMAN-like [Cucurbita maxima]) HSP 1 Score: 201.4 bits (511), Expect = 6.1e-48 Identity = 125/202 (61.88%), Postives = 140/202 (69.31%), Query Frame = 0
BLAST of Sed0024312 vs. NCBI nr
Match: KAG7036326.1 (Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 200.3 bits (508), Expect = 1.4e-47 Identity = 125/206 (60.68%), Postives = 137/206 (66.50%), Query Frame = 0
BLAST of Sed0024312 vs. NCBI nr
Match: XP_022931183.1 (transcriptional regulator SUPERMAN-like [Cucurbita moschata]) HSP 1 Score: 198.7 bits (504), Expect = 3.9e-47 Identity = 127/211 (60.19%), Postives = 139/211 (65.88%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.4e-08 Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 7.8e-06 Identity = 46/144 (31.94%), Postives = 63/144 (43.75%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04 Identity = 51/169 (30.18%), Postives = 75/169 (44.38%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.6e-04 Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy TrEMBL
Match: A0A6J1JZP2 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491156 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48 Identity = 125/202 (61.88%), Postives = 140/202 (69.31%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy TrEMBL
Match: A0A6J1EXQ3 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111437442 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.9e-47 Identity = 127/211 (60.19%), Postives = 139/211 (65.88%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy TrEMBL
Match: A0A5A7VDP2 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003440 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 2.0e-41 Identity = 123/204 (60.29%), Postives = 136/204 (66.67%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy TrEMBL
Match: A0A1S4E031 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103494911 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 2.0e-41 Identity = 123/204 (60.29%), Postives = 136/204 (66.67%), Query Frame = 0
BLAST of Sed0024312 vs. ExPASy TrEMBL
Match: A0A6J1HUE7 (transcriptional regulator TAC1-like OS=Cucurbita maxima OX=3661 GN=LOC111466951 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 3.2e-34 Identity = 106/198 (53.54%), Postives = 122/198 (61.62%), Query Frame = 0
BLAST of Sed0024312 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of Sed0024312 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 58.9 bits (141), Expect = 4.5e-09 Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 0
BLAST of Sed0024312 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 7.7e-09 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Sed0024312 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 3.3e-07 Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = 0
BLAST of Sed0024312 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 ) HSP 1 Score: 52.0 bits (123), Expect = 5.5e-07 Identity = 46/144 (31.94%), Postives = 63/144 (43.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|