Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTACGGCCTTACAATTATCGCTCTCAAATCTTCCCCTCGAAGTTTCATCTTCAAAACCATTTTCCCGCCACCGCCACCGCCACCGCCACCGCCAAATTTCTCCGGTCACTTCTTCAGCGCATCTTCTTCAACATGAACATCAGGTAACACTTTCTTCTCTCTGTGAAACAGGAAGGGGATGGCAATGGAATCCAAGAAACGAAATCGAAAACCGCTCTCGGATTGTACCAATATCGTCCTCTCCTCGCAATCGCCGGCTTCAAATTTCTCCGCTGCAATCAAATCTCGCAAGCGTGTAATTAAATCCGTCGTTAAAGAAGTTGTCAACGACGAGAAGAAACGCGAATCGAGTTTTGCGTCTGCATCTACATCCGTTGATTTACAAGCGAACCCTAGTTTTGAGTTTCTTCCTGCAGAACCAAACCCTAGTTCTTGTAGTCTTCCTATAGAAGCATCCACTCCTTTGCGGCGTACTGATTTGCCGTCTTGTTCTGGTAATTGTACTTTCTCGTTGATTTGTTGAGATTTTGGTGTTTGGTTCTTGATTTTTGGGTAGGAATACTGTACTTGAAATACTAGGGAATTTAAGGAGTACAAGCTGTTTTGGGGATTTGTTGGTTTACTGTTAGGTTCTTGTGAGATTTCTGCCTGCGGGAGAGTATTATTCTATACACATGGTTATATGAACTAGGAACTAGGAACTTGAGATTTGAGATTCTTACTGTTCGATTTTTTTTCATGGTTTGAACTCTGTGTAATATGTTGCGTATTGATTTCAGGAACAGATCATGTTTCTGAGCCCAAGTCCTTCTACAGTCGAAGGAACCCGACGAATAAAAGGAAGAGCGTTGAGATAACAGATGCACCATTTGTCTTCTCTACCGCATCAAAAGTCGAAACTAGGTAAAGCTCTTTGTAGTTTTTCTGCCAATTCGAAACGGAGTCTCTTTTTACATTTGAGTCTCTGCTGCGTTTAATGGATTGATTTTCTTGAACCAGAGGAATTTAGTCGTGGGTTCGTAATGAAAAGTGTTACCGTTTTGTATATGTGGTTAATGTAATTCTATGGTTGCTAAGTTTCAAAGGAACAGTTTACCTGCTCCTTACAGTAATTATCAACCTGGTCTGCCCCTTCCCTGTCTTTCGGATAAATTAAGCAGTTATCTATGTTGGTTTATGCATTGCTTTGAATTTCTATGAAAAATCTGACAATTAAGGCCTCGTTTGATAACCATTTGGTTTTTTGTTTTTTGTTTATGAAATTTAGGCCTATTTCTACTCAAATTTCCTACTATGTGCTCCATCTTTCCTGCAATATATGCATCTCTCGTTAAGAAAGTAGCTGAATATTAACCAAATTTCAAAAACAAAAATAAGCTTTTATAAGCTACTTTTTTTTGTTTCTAAATTTTGGTTTTATTTATTAAAATATAGGTAAGATTGTAGATATCAAAATAAGAAAAAAGCTATGGTAAGGTAGTTGTTGTAGGCTTAAATTTCAAAAAAACAAAATTGGTTATCATATGGGGCCTAAAAGTTACCATTCTAGTTGATCAGGTGTCACTCTTGTATTTATCCAGATGAGGGAAAAATTGCACCAACTAAATCAGAATTTGTCAACACTTTTTTTGTTTTATTTTTTGTCGATAGGGTTGTTGAGTCTCAATTGTTTGACTGCTGTAGGATGAAAAGTTTCAGTCTGTTGACGCTTTCAATTTGTAATTGAATGCTTGTTTGGCTTCTCTAAAGATATGGATTAAGAGATATGAGAAATCTGTCTCCTAATCTTTCATTTTTTGTATATTACTCATTTAGTAGTTAATCATTCCCTTGCTTTTATGTAGGGTTGAGAAAAAAGATGGATACAGCAGCCCATCCAAAGCGAAGACTGTACCATATAGAAAGGTCCGTCTGAAAGTTATAGCGCTGTCATTTTTCTAAATCTGTCAATCTAAACTTGGGGCATGCTACTATCCTTGTTTTTTCTTCTTGCCTTTTCAGTTTTTAATTTGAAGCTTATGCTTTAAGTCAGAAAAATATGTGTTCTGATATTTCTCAAAAGAAATGTGATGCTAGCTGTGCTTATCCATACCACAATTGGTAGTTAAAAATCTTAAATCATAGTTCGACAAATTGTACTGATGAGTAGCTTTTACTTTTCTTTTCATTTGACAGAGGCAGCGCTCCTCAATATATGGGGACGATGAATGCGAGTTCGTTCTTCCACGGGAATTTGTTGAGCAGCAGAAAGCATATTTTTCAGAAGTTGATGCATTTGAACTGCCAATGGAGGAGGCTAAATCATCGGACTCGGAGTAGATGGTGCTGTATAGTTTTGTGAAGCATAGGCAATGGAGATTCAAGATAGTAGTGTGCATGGGGAAGCTGGAAAGTAGTTCATGTTCATAACTCATAGTTCCGGCTTGCTCACTTCTGTCGTTCGATGCAGGTGCTGTTCTTTCAACTCTTTCAAATATGTTAGCTTTTAGTGTCTTTAAGATCTCTCTCTCCCTCTTTTTAGTTCGACGTATGGGATGAGGAGATTTAAATCGCTATGTAGTTTAATCAATTGAGCTATGATGATGTTGGCTAATGAGAAAGTTGATCTTTTTTATTTGTTAGGCTGAGAATTTTTTTTTAATTTTTGCATTTGCAATATAATCTTCAAGTGTGGCTTTATAGACTAATACAGGTTTGGACTGGATAGGTAACTTGGCCACAGATCAAAGAGGGAAGTGTTTGGTCAATTAGGGTGTGTTTGGGCTCCCGTTTATTATAAACGGTGGTTATCTAAACCTGCGTGCCTGTTTATCTAAAAC
mRNA sequence
GTTTACGGCCTTACAATTATCGCTCTCAAATCTTCCCCTCGAAGTTTCATCTTCAAAACCATTTTCCCGCCACCGCCACCGCCACCGCCACCGCCAAATTTCTCCGGTCACTTCTTCAGCGCATCTTCTTCAACATGAACATCAGGTAACACTTTCTTCTCTCTGTGAAACAGGAAGGGGATGGCAATGGAATCCAAGAAACGAAATCGAAAACCGCTCTCGGATTGTACCAATATCGTCCTCTCCTCGCAATCGCCGGCTTCAAATTTCTCCGCTGCAATCAAATCTCGCAAGCGTGTAATTAAATCCGTCGTTAAAGAAGTTGTCAACGACGAGAAGAAACGCGAATCGAGTTTTGCGTCTGCATCTACATCCGTTGATTTACAAGCGAACCCTAGTTTTGAGTTTCTTCCTGCAGAACCAAACCCTAGTTCTTGTAGTCTTCCTATAGAAGCATCCACTCCTTTGCGGCGTACTGATTTGCCGTCTTGTTCTGGAACAGATCATGTTTCTGAGCCCAAGTCCTTCTACAGTCGAAGGAACCCGACGAATAAAAGGAAGAGCGTTGAGATAACAGATGCACCATTTGTCTTCTCTACCGCATCAAAAGTCGAAACTAGGGTTGAGAAAAAAGATGGATACAGCAGCCCATCCAAAGCGAAGACTGTACCATATAGAAAGAGGCAGCGCTCCTCAATATATGGGGACGATGAATGCGAGTTCGTTCTTCCACGGGAATTTGTTGAGCAGCAGAAAGCATATTTTTCAGAAGTTGATGCATTTGAACTGCCAATGGAGGAGGCTAAATCATCGGACTCGGAGTAGATGGTGCTGTATAGTTTTGTGAAGCATAGGCAATGGAGATTCAAGATAGTAGTGTGCATGGGGAAGCTGGAAAGTAGTTCATGTTCATAACTCATAGTTCCGGCTTGCTCACTTCTGTCGTTCGATGCAGGTGCTGTTCTTTCAACTCTTTCAAATATGTTAGCTTTTAGTGTCTTTAAGATCTCTCTCTCCCTCTTTTTAGTTCGACGTATGGGATGAGGAGATTTAAATCGCTATGTAGTTTAATCAATTGAGCTATGATGATGTTGGCTAATGAGAAAGTTGATCTTTTTTATTTGTTAGGCTGAGAATTTTTTTTTAATTTTTGCATTTGCAATATAATCTTCAAGTGTGGCTTTATAGACTAATACAGGTTTGGACTGGATAGGTAACTTGGCCACAGATCAAAGAGGGAAGTGTTTGGTCAATTAGGGTGTGTTTGGGCTCCCGTTTATTATAAACGGTGGTTATCTAAACCTGCGTGCCTGTTTATCTAAAAC
Coding sequence (CDS)
ATGGCAATGGAATCCAAGAAACGAAATCGAAAACCGCTCTCGGATTGTACCAATATCGTCCTCTCCTCGCAATCGCCGGCTTCAAATTTCTCCGCTGCAATCAAATCTCGCAAGCGTGTAATTAAATCCGTCGTTAAAGAAGTTGTCAACGACGAGAAGAAACGCGAATCGAGTTTTGCGTCTGCATCTACATCCGTTGATTTACAAGCGAACCCTAGTTTTGAGTTTCTTCCTGCAGAACCAAACCCTAGTTCTTGTAGTCTTCCTATAGAAGCATCCACTCCTTTGCGGCGTACTGATTTGCCGTCTTGTTCTGGAACAGATCATGTTTCTGAGCCCAAGTCCTTCTACAGTCGAAGGAACCCGACGAATAAAAGGAAGAGCGTTGAGATAACAGATGCACCATTTGTCTTCTCTACCGCATCAAAAGTCGAAACTAGGGTTGAGAAAAAAGATGGATACAGCAGCCCATCCAAAGCGAAGACTGTACCATATAGAAAGAGGCAGCGCTCCTCAATATATGGGGACGATGAATGCGAGTTCGTTCTTCCACGGGAATTTGTTGAGCAGCAGAAAGCATATTTTTCAGAAGTTGATGCATTTGAACTGCCAATGGAGGAGGCTAAATCATCGGACTCGGAGTAG
Protein sequence
MAMESKKRNRKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSFASASTSVDLQANPSFEFLPAEPNPSSCSLPIEASTPLRRTDLPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKAKTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE
Homology
BLAST of Sed0024289 vs. NCBI nr
Match:
XP_038884349.1 (uncharacterized protein LOC120075210 isoform X3 [Benincasa hispida])
HSP 1 Score: 269.2 bits (687), Expect = 3.0e-68
Identity = 156/234 (66.67%), Postives = 177/234 (75.64%), Query Frame = 0
Query: 3 MESKK---RNRKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
MES+K R RKPL+DCTN +LSSQS ASNFSA+IK RKRVIKS VK+VVN+EKK +
Sbjct: 1 MESQKRILRARKPLADCTNTILSSQSSASNFSASIKPRKRVIKSAVKDVVNNEKKSQPVL 60
Query: 63 ASASTSVDLQA-NPSFEFLPAEP------------------NPSSCSLPIEASTPLRRTD 122
AS STSV+L+A NPS +FLP EP PSS LP E STP RR D
Sbjct: 61 ASESTSVNLRASNPSSDFLPTEPASDFSPVEPNPSADSLPSEPSSSRLPTEVSTPPRRAD 120
Query: 123 LPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKA 182
LPS SGTD VSEP+SFYSRR PTNKRKSVEI APF+FST+SK+ TR K++GY SPSKA
Sbjct: 121 LPSSSGTDRVSEPQSFYSRRQPTNKRKSVEIAVAPFIFSTSSKILTRGRKREGYDSPSKA 180
Query: 183 KTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
KTVP +KRQR+++Y DE LPREFVEQQKAYFSEVDAFELP+EEAKSSDSE
Sbjct: 181 KTVPCKKRQRATMYEQDESNIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE 234
BLAST of Sed0024289 vs. NCBI nr
Match:
XP_023515045.1 (uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 266.5 bits (680), Expect = 1.9e-67
Identity = 155/234 (66.24%), Postives = 179/234 (76.50%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
MES+KRN RKPL+DCTN VLSSQS ASN SAAIK RKRV+KS VK+V+N+EK+ SSF
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVLNNEKEGVSSF 60
Query: 63 ASASTSVDLQA-NPSFEFLPAEPN------------------PSSCSLPIEASTPLRRTD 122
ASASTSV+LQA NPS EFLP +P+ PSS S+P E STP R D
Sbjct: 61 ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRLVD 120
Query: 123 LPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKA 182
LPS SGTD V EP+SFYSRR+P N+RKS E APF+FSTASK+ TR EK+ SSPS+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILTRGEKRAADSSPSRA 180
Query: 183 KTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
+TVPYRKRQR +IYG+DE + LPREFVE+QKAYFSEVDAFEL +EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGAIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0024289 vs. NCBI nr
Match:
XP_022991070.1 (uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima])
HSP 1 Score: 266.2 bits (679), Expect = 2.5e-67
Identity = 156/234 (66.67%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
MES+KRN RKPL+DCTN VLSSQS ASN SAAIK RKRV+K VK+VVN+EK+ SSF
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 63 ASASTSVDLQA-NPSFEFLPAEPN------------------PSSCSLPIEASTPLRRTD 122
ASASTSV+LQA NPS +FLP +P+ PSS SLP E STP R D
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120
Query: 123 LPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKA 182
LPS SGTD V EP+SFYSRR+P N+RKS E APFVFSTASK+ TR EK+ SSPS+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180
Query: 183 KTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
+TVPYRKRQR +IYG+DE + LPREFVE+QKAYFSEVDAFEL +EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0024289 vs. NCBI nr
Match:
XP_022134150.1 (uncharacterized protein LOC111006488 isoform X3 [Momordica charantia])
HSP 1 Score: 265.8 bits (678), Expect = 3.3e-67
Identity = 158/258 (61.24%), Postives = 179/258 (69.38%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
ME+ KRN RKPLSDCTN VLSSQS ASNFS+ IK R+RVIKS VK+ VN+EKK ESSF
Sbjct: 1 MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60
Query: 63 ASASTSVDLQA------------NPSFEFLPAEPN------------------------- 122
SAS S++LQA NPS + LP EPN
Sbjct: 61 TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120
Query: 123 ------PSSCSLPIEASTPLRRTDLPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPF 182
PSS SLP EASTP RR DLPS SGTD VSEP+SFYSRR+PTNKRKS EI PF
Sbjct: 121 DCLPTEPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPF 180
Query: 183 VFSTASKVETRVEKKDGYSSPSKAKTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFS 215
+F+TASK+ T EK+DGYSSPSKA+TVP +KRQR +IYG DE + LPREFVE+QKAYFS
Sbjct: 181 IFATASKIHTMGEKRDGYSSPSKARTVPCKKRQRGTIYGKDESKIELPREFVEKQKAYFS 240
BLAST of Sed0024289 vs. NCBI nr
Match:
XP_022952551.1 (uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594.1 hypothetical protein SDJN03_07827, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033272.1 hypothetical protein SDJN02_07326 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 263.5 bits (672), Expect = 1.6e-66
Identity = 154/234 (65.81%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
MES+KRN RKPL+DCTN VLSSQS ASN SAAIK RKRV+KS VK+VVN+EK+ SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
Query: 63 ASASTSVDLQA-NPSFEFLPAEPN------------------PSSCSLPIEASTPLRRTD 122
ASASTSV+LQA NPS EFLP +P+ PSS S+P E STP R D
Sbjct: 61 ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
Query: 123 LPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKA 182
LPS SGTD V EP+SFYSRR+P N+RKS E APF+FSTASK+ +R EK+ SSPS+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
Query: 183 KTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
+TVPYRKRQR +IYG+DE + LPREFVE+QKAYFSEVDAFEL +EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0024289 vs. ExPASy TrEMBL
Match:
A0A6J1JRU8 (uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 156/234 (66.67%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
MES+KRN RKPL+DCTN VLSSQS ASN SAAIK RKRV+K VK+VVN+EK+ SSF
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 63 ASASTSVDLQA-NPSFEFLPAEPN------------------PSSCSLPIEASTPLRRTD 122
ASASTSV+LQA NPS +FLP +P+ PSS SLP E STP R D
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120
Query: 123 LPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKA 182
LPS SGTD V EP+SFYSRR+P N+RKS E APFVFSTASK+ TR EK+ SSPS+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180
Query: 183 KTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
+TVPYRKRQR +IYG+DE + LPREFVE+QKAYFSEVDAFEL +EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0024289 vs. ExPASy TrEMBL
Match:
A0A6J1BXA7 (uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006488 PE=4 SV=1)
HSP 1 Score: 265.8 bits (678), Expect = 1.6e-67
Identity = 158/258 (61.24%), Postives = 179/258 (69.38%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
ME+ KRN RKPLSDCTN VLSSQS ASNFS+ IK R+RVIKS VK+ VN+EKK ESSF
Sbjct: 1 MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60
Query: 63 ASASTSVDLQA------------NPSFEFLPAEPN------------------------- 122
SAS S++LQA NPS + LP EPN
Sbjct: 61 TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120
Query: 123 ------PSSCSLPIEASTPLRRTDLPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPF 182
PSS SLP EASTP RR DLPS SGTD VSEP+SFYSRR+PTNKRKS EI PF
Sbjct: 121 DCLPTEPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPF 180
Query: 183 VFSTASKVETRVEKKDGYSSPSKAKTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFS 215
+F+TASK+ T EK+DGYSSPSKA+TVP +KRQR +IYG DE + LPREFVE+QKAYFS
Sbjct: 181 IFATASKIHTMGEKRDGYSSPSKARTVPCKKRQRGTIYGKDESKIELPREFVEKQKAYFS 240
BLAST of Sed0024289 vs. ExPASy TrEMBL
Match:
A0A6J1GKJ2 (uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 7.9e-67
Identity = 154/234 (65.81%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
MES+KRN RKPL+DCTN VLSSQS ASN SAAIK RKRV+KS VK+VVN+EK+ SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
Query: 63 ASASTSVDLQA-NPSFEFLPAEPN------------------PSSCSLPIEASTPLRRTD 122
ASASTSV+LQA NPS EFLP +P+ PSS S+P E STP R D
Sbjct: 61 ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
Query: 123 LPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKA 182
LPS SGTD V EP+SFYSRR+P N+RKS E APF+FSTASK+ +R EK+ SSPS+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
Query: 183 KTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
+TVPYRKRQR +IYG+DE + LPREFVE+QKAYFSEVDAFEL +EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0024289 vs. ExPASy TrEMBL
Match:
A0A6J1JPQ1 (cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)
HSP 1 Score: 256.9 bits (655), Expect = 7.4e-65
Identity = 154/234 (65.81%), Postives = 176/234 (75.21%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
MES+KRN RKPL+DCTN VLSSQS ASN SAAIK RKRV+K VK+VVN+EK+ SSF
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 63 ASASTSVDLQA-NPSFEFLPAEPN------------------PSSCSLPIEASTPLRRTD 122
ASASTSV+LQA NPS +FLP +P+ PSS SLP E STP R D
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120
Query: 123 LPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPFVFSTASKVETRVEKKDGYSSPSKA 182
LPS S D V EP+SFYSRR+P N+RKS E APFVFSTASK+ TR EK+ SSPS+A
Sbjct: 121 LPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180
Query: 183 KTVPYRKRQRSSIYGDDECEFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
+TVPYRKRQR +IYG+DE + LPREFVE+QKAYFSEVDAFEL +EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232
BLAST of Sed0024289 vs. ExPASy TrEMBL
Match:
A0A6J1C164 (uncharacterized protein LOC111006488 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006488 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 9.6e-65
Identity = 158/271 (58.30%), Postives = 179/271 (66.05%), Query Frame = 0
Query: 3 MESKKRN---RKPLSDCTNIVLSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSF 62
ME+ KRN RKPLSDCTN VLSSQS ASNFS+ IK R+RVIKS VK+ VN+EKK ESSF
Sbjct: 1 MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60
Query: 63 ASASTSVDLQA------------NPSFEFLPAEPN------------------------- 122
SAS S++LQA NPS + LP EPN
Sbjct: 61 TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120
Query: 123 ------PSSCSLPIEASTPLRRTDLPSCSGTDHVSEPKSFYSRRNPTNKRKSVEITDAPF 182
PSS SLP EASTP RR DLPS SGTD VSEP+SFYSRR+PTNKRKS EI PF
Sbjct: 121 DCLPTEPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPF 180
Query: 183 VFSTASKVETRVEKKDGYSSPSKAKTVPYRK-------------RQRSSIYGDDECEFVL 215
+F+TASK+ T EK+DGYSSPSKA+TVP +K RQR +IYG DE + L
Sbjct: 181 IFATASKIHTMGEKRDGYSSPSKARTVPCKKQNMYSDLSPRNVMRQRGTIYGKDESKIEL 240
BLAST of Sed0024289 vs. TAIR 10
Match:
AT3G56250.1 (unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi - 20; Plants - 21; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )
HSP 1 Score: 70.1 bits (170), Expect = 2.5e-12
Identity = 69/215 (32.09%), Postives = 113/215 (52.56%), Query Frame = 0
Query: 10 RKPLSDCTNIV-LSSQSPASNFSAAIKSRKRVIKSVVKEVVNDEKKRESSFASASTSVDL 69
RKPL+DCTN V SSQ +S+ A S +K +V++ EK ++ + +++T+ ++
Sbjct: 13 RKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKDVN--TSATAPEI 72
Query: 70 QANPSFEFLPAEPNPSSCSLPIEASTPLRRTDLPSCSGTD--HVSEPKSFYS-RRNPTNK 129
+ P + S L AS P R S G +EP S Y+ RR + +
Sbjct: 73 ASRPITTDVRPVTRRMSADLASPASAPSRPQTSRSDMGVSDKDFTEPWSVYTVRRKASGQ 132
Query: 130 RKSVEITDAPFVFSTASKVETRVE----KKDGYSSPSKAKT--VPYRKRQRSSIYGDDEC 189
++S DA S A+++ + KK +S +K KT V +KRQR+ ++
Sbjct: 133 KRS---KDASSSTSAAARIRLDLSSSSGKKTRQASENKKKTLKVAPKKRQRTVKQEKEDP 192
Query: 190 EFVLPREFVEQQKAYFSEVDAFELPMEEAKSSDSE 215
++++E+QKAYF+E+DAFELP+EE +SDS+
Sbjct: 193 VSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD 222
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038884349.1 | 3.0e-68 | 66.67 | uncharacterized protein LOC120075210 isoform X3 [Benincasa hispida] | [more] |
XP_023515045.1 | 1.9e-67 | 66.24 | uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022991070.1 | 2.5e-67 | 66.67 | uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima] | [more] |
XP_022134150.1 | 3.3e-67 | 61.24 | uncharacterized protein LOC111006488 isoform X3 [Momordica charantia] | [more] |
XP_022952551.1 | 1.6e-66 | 65.81 | uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JRU8 | 1.2e-67 | 66.67 | uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1BXA7 | 1.6e-67 | 61.24 | uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1GKJ2 | 7.9e-67 | 65.81 | uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1JPQ1 | 7.4e-65 | 65.81 | cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114877... | [more] |
A0A6J1C164 | 9.6e-65 | 58.30 | uncharacterized protein LOC111006488 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
AT3G56250.1 | 2.5e-12 | 32.09 | unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Ba... | [more] |