Sed0024103 (gene) Chayote v1

Overview


Name	Sed0024103
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF024
Location	LG04: 29207524 .. 29208069 (+)
RNA-Seq Expression	Sed0024103
Synteny	Sed0024103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCCGGCCACCACCCCGTCTACCGAGGCGTCCGCCGCCGCAACACAGGCAAATGGGTCTCCGAGATTCGCGAGCCCAGGAAACCCAATCGGATTTGGTTGGGAACCTTCCCAACCGCCGAAATGGCCGCCGTGGCTTACGATGTTGCCGCCCTTGCTCTCAAAGGCCCAGACGCGGAGCTCAATTTCCCTAATTCCGCCTCTTCCCTTCCCGTCCCTGCGTCTCGGTCGCCGTCTGATATTCAGGCGGCGGCCACCTCCGCCGCTGCTGCCCTTGGAGCAGCTGCGGCGGCCATGGAGACGCGCGGTAGTTATAGTAATTCGTCGGGGACTAACTTAGGTCACAACTATGGAGGAAGATATGATCAAGGAGAAGTGGGAAATCAGTTCATGGATGAGGACTTGATCTTTGATATGCCCAATGTCTTAATGAATATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAATCACAGTGGCAACGACGACGACGGAGACGACGATGGTGGTCAAAACCTTTGGAGTTTTTCTTAA

mRNA sequence

ATGGCTACTTCCGGCCACCACCCCGTCTACCGAGGCGTCCGCCGCCGCAACACAGGCAAATGGGTCTCCGAGATTCGCGAGCCCAGGAAACCCAATCGGATTTGGTTGGGAACCTTCCCAACCGCCGAAATGGCCGCCGTGGCTTACGATGTTGCCGCCCTTGCTCTCAAAGGCCCAGACGCGGAGCTCAATTTCCCTAATTCCGCCTCTTCCCTTCCCGTCCCTGCGTCTCGGTCGCCGTCTGATATTCAGGCGGCGGCCACCTCCGCCGCTGCTGCCCTTGGAGCAGCTGCGGCGGCCATGGAGACGCGCGGTAGTTATAGTAATTCGTCGGGGACTAACTTAGGTCACAACTATGGAGGAAGATATGATCAAGGAGAAGTGGGAAATCAGTTCATGGATGAGGACTTGATCTTTGATATGCCCAATGTCTTAATGAATATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAATCACAGTGGCAACGACGACGACGGAGACGACGATGGTGGTCAAAACCTTTGGAGTTTTTCTTAA

Coding sequence (CDS)

ATGGCTACTTCCGGCCACCACCCCGTCTACCGAGGCGTCCGCCGCCGCAACACAGGCAAATGGGTCTCCGAGATTCGCGAGCCCAGGAAACCCAATCGGATTTGGTTGGGAACCTTCCCAACCGCCGAAATGGCCGCCGTGGCTTACGATGTTGCCGCCCTTGCTCTCAAAGGCCCAGACGCGGAGCTCAATTTCCCTAATTCCGCCTCTTCCCTTCCCGTCCCTGCGTCTCGGTCGCCGTCTGATATTCAGGCGGCGGCCACCTCCGCCGCTGCTGCCCTTGGAGCAGCTGCGGCGGCCATGGAGACGCGCGGTAGTTATAGTAATTCGTCGGGGACTAACTTAGGTCACAACTATGGAGGAAGATATGATCAAGGAGAAGTGGGAAATCAGTTCATGGATGAGGACTTGATCTTTGATATGCCCAATGTCTTAATGAATATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAATCACAGTGGCAACGACGACGACGGAGACGACGATGGTGGTCAAAACCTTTGGAGTTTTTCTTAA

Protein sequence

MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRYDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWSFS

Homology

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BLAST of Sed0024103 vs. NCBI nr
Match: XP_022144756.1 (ethylene-responsive transcription factor ERF024 [Momordica charantia])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 152/183 (83.06%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPD 60
           MA+SG HPVYRGVRRRNT KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKG D
Sbjct: 1   MASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYS---NSSGTNLGH 120
           AELNFPNSASSLPVPASRSPSDIQAAA SAAAALGAAAAAME   S+    +SSGT+ G 
Sbjct: 61  AELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAMEAGNSHPRNYSSSGTHYGD 120

Query: 121 NYGGRYDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNL 180
             G RYDQGE G++F+DEDLIFDMPNVLMNMAEGMLLSPPRFN H G++DDGDDDG QNL
Sbjct: 121 VRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGDQNL 180

[Close]

BLAST of Sed0024103 vs. NCBI nr
Match: XP_038906274.1 (ethylene-responsive transcription factor ERF024 [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 7.8e-70
Identity = 149/180 (82.78%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 2   ATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDA 61
           ++SG HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGH-NYG 121
           ELNFPNSASSLPVPASRSPSDIQAAA SAAAALGAAAAA+E R +  +  GTN     YG
Sbjct: 63  ELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARNNSGSYRGTNSSDIVYG 122

Query: 122 GRYDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWSF 181
           GRY Q  +GNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFN H G DDD DD   QNLW+F
Sbjct: 123 GRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIH-GGDDDHDDGADQNLWNF 181

[Close]

BLAST of Sed0024103 vs. NCBI nr
Match: XP_022946339.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata] >KAG6596551.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028087.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68
Identity = 148/182 (81.32%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPD 60
           MATSG HP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  AELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYG 120
             LNFPNSASSLPVPASRSPSDIQAAA SAAAALGAAAAA+E R  +           +G
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGF-----------HG 120

Query: 121 GR-YDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWS 180
           GR  D GEVGN FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH G DDDG D G  NLW+
Sbjct: 121 GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH-GGDDDGADHGTGNLWN 170

Query: 181 FS 182
           FS
Sbjct: 181 FS 170

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BLAST of Sed0024103 vs. NCBI nr
Match: XP_023539533.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 9.5e-68
Identity = 147/181 (81.22%), Postives = 152/181 (83.98%), Query Frame = 0


Query: 1   MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPD 60
           MATSG HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  AELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYG 120
             LNFPNSASSLPVPASRSPSDIQAAA SAAAALGAAAAA+E R  +           +G
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGF-----------HG 120

Query: 121 GR-YDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWS 180
           GR  D GEVGN FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH G DDD  D G +NLW+
Sbjct: 121 GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH-GGDDDRADHGTENLWN 169

[Close]

BLAST of Sed0024103 vs. NCBI nr
Match: XP_004138009.1 (ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hypothetical protein Csa_000912 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 147/181 (81.22%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 2   ATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDA 61
           ++SG HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGH-NYG 121
           ELNFPNSASSLP+PASRSPSDIQAAA SAAAALGAAAAAME R + S+  G++     YG
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHSEDVMYG 122

Query: 122 GRYDQG-EVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWS 181
            RY Q  E+GNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH G DD+ D    QNLW+
Sbjct: 123 ARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH-GGDDNRDFGTDQNLWN 182

[Close]

BLAST of Sed0024103 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-49
Identity = 116/178 (65.17%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 5   GHHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAEL 64
           G HP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  AEL
Sbjct: 10  GRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAEL 69

Query: 65  NFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRY 124
           NFPNS SSLP P S SP+DIQAAA SAAAA GAA  A+    + S +SG          Y
Sbjct: 70  NFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVAC---MNSSY 129

Query: 125 DQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHSGNDDDGDDDGGQNLWSF 181
           D   + N FMDEDL+FDMPNVLMNMAEGMLLSPPR     +  D DG   G   LW+F
Sbjct: 130 DNTNM-NGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of Sed0024103 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.5e-35
Identity = 88/177 (49.72%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 8   PVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAELNFPN 67
           PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG +A LNFP 
Sbjct: 17  PVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPG 76

Query: 68  SASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRG----SYSNSSGTNLGHNYGGRY 127
           S  S PVP S S +DI+AAA +AAA  G      E +     S S+ S     H      
Sbjct: 77  SVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHVDNDVG 136

Query: 128 DQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWSF 181
                G +FMDE+ + +MPN+L NMAEGM+++PP +     +DD  ++   ++LW +
Sbjct: 137 SSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLWGY 192

[Close]

BLAST of Sed0024103 vs. ExPASy Swiss-Prot
Match: Q9FJ90 (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-32
Identity = 89/184 (48.37%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 4   SGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAEL 63
           SG H ++RG+R RN GKWVSEIREPRK  RIWLGT+P  EMAA AYDVAALALKGPDA L
Sbjct: 59  SGKHSIFRGIRLRN-GKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVL 118

Query: 64  NFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRY 123
           NFP  A +   P S S +DI+AAA+ AA          E +          L     G+ 
Sbjct: 119 NFPGLALTYVAPVSNSAADIRAAASRAA----------EMKQPDQGGDEKVLEPVQPGKE 178

Query: 124 DQGE------VGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDG-DDDGGQN 181
           ++ E         +FMDE+ + +MP +L  MAEGML+SPPR   H   +DD  ++  G N
Sbjct: 179 EELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDN 231

[Close]

BLAST of Sed0024103 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.8e-32
Identity = 83/175 (47.43%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 7   HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAELNFP 66
           +PVYRG+R R +GKWVSEIREP+K  R+WLGT+PT EMAA AYDVAALALKG D  LNFP
Sbjct: 87  NPVYRGIRCR-SGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFP 146

Query: 67  NSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRYDQG 126
           +S  S P+P S S + I+ AA +AAA  GAA AA++      +             YD  
Sbjct: 147 DSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKV-----------YDTA 206

Query: 127 EVGNQ-FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWSF 181
           E     F+DE+ + +MP +L +MA+GM+++PP +     +DD  ++  G++LWS+
Sbjct: 207 ESSTMGFVDEEELLNMPGLLADMAKGMMVAPP-WMGSPPSDDSPENSDGESLWSY 248

[Close]

BLAST of Sed0024103 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 88/175 (50.29%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 7   HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAELNFP 66
           HP+YRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G  A LNF 
Sbjct: 45  HPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFA 104

Query: 67  NSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRYDQG 126
           +SA  L +P S    DIQ AA  AA A         T     +   T +   Y     +G
Sbjct: 105 DSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEG 164

Query: 127 EVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHSGNDDDGDDDGGQNLWSF 181
                +MDE+ +F MP +L NMAEGMLL PP    NH   + DG+ DG  +LWS+
Sbjct: 165 AF---YMDEETMFGMPTLLDNMAEGMLLPPPSVQWNH---NYDGEGDGDVSLWSY 213

[Close]

BLAST of Sed0024103 vs. ExPASy TrEMBL
Match: A0A6J1CUD0 (ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 GN=LOC111014369 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.6e-74
Identity = 152/183 (83.06%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPD 60
           MA+SG HPVYRGVRRRNT KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKG D
Sbjct: 1   MASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYS---NSSGTNLGH 120
           AELNFPNSASSLPVPASRSPSDIQAAA SAAAALGAAAAAME   S+    +SSGT+ G 
Sbjct: 61  AELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAMEAGNSHPRNYSSSGTHYGD 120

Query: 121 NYGGRYDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNL 180
             G RYDQGE G++F+DEDLIFDMPNVLMNMAEGMLLSPPRFN H G++DDGDDDG QNL
Sbjct: 121 VRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGDQNL 180

[Close]

BLAST of Sed0024103 vs. ExPASy TrEMBL
Match: A0A6J1G3I4 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111450440 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.1e-69
Identity = 148/182 (81.32%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPD 60
           MATSG HP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  AELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYG 120
             LNFPNSASSLPVPASRSPSDIQAAA SAAAALGAAAAA+E R  +           +G
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGF-----------HG 120

Query: 121 GR-YDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWS 180
           GR  D GEVGN FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH G DDDG D G  NLW+
Sbjct: 121 GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH-GGDDDGADHGTGNLWN 170

Query: 181 FS 182
           FS
Sbjct: 181 FS 170

[Close]

BLAST of Sed0024103 vs. ExPASy TrEMBL
Match: A0A0A0LBA2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.9e-68
Identity = 147/181 (81.22%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 2   ATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDA 61
           ++SG HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGH-NYG 121
           ELNFPNSASSLP+PASRSPSDIQAAA SAAAALGAAAAAME R + S+  G++     YG
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHSEDVMYG 122

Query: 122 GRYDQG-EVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWS 181
            RY Q  E+GNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH G DD+ D    QNLW+
Sbjct: 123 ARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNH-GGDDNRDFGTDQNLWN 182

[Close]

BLAST of Sed0024103 vs. ExPASy TrEMBL
Match: A0A6J1L0H2 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661 GN=LOC111498736 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.8e-67
Identity = 146/181 (80.66%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPD 60
           MATSG HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  AELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYG 120
             LNFPNSASSLPVPASRSPSDIQAAA SAAAALGAAAAA+E R  +           +G
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGF-----------HG 120

Query: 121 GR-YDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWS 180
           GR  D GEV N FMDEDLIFDMPN+LMNMAEGMLLSPPRFNNH G DDDG D G  NLW+
Sbjct: 121 GRSNDPGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNH-GGDDDGADHGTGNLWN 169

[Close]

BLAST of Sed0024103 vs. ExPASy TrEMBL
Match: A0A6J1J6V1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661 GN=LOC111481761 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.1e-67
Identity = 144/184 (78.26%), Postives = 160/184 (86.96%), Query Frame = 0


Query: 1   MATSGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPD 60
           M++SG HP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGS----YSNSSGTNLG 120
           AELNFPNSA+SLPVPASRS SDIQAAA SAAAALGAAAAA+E R +     SN SGTN  
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAIEARNNNGRRRSNFSGTN-- 120

Query: 121 HNYGGRYDQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQN 180
            +YG RYD+ E+GN+F+DEDLIFDMPNVL+NMAEGMLLSPPRFN H GNDD   DDG QN
Sbjct: 121 SSYGTRYDENELGNEFVDEDLIFDMPNVLINMAEGMLLSPPRFNVH-GNDD--RDDGNQN 179

[Close]

BLAST of Sed0024103 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.3e-50
Identity = 116/178 (65.17%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 5   GHHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAEL 64
           G HP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  AEL
Sbjct: 10  GRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAEL 69

Query: 65  NFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRY 124
           NFPNS SSLP P S SP+DIQAAA SAAAA GAA  A+    + S +SG          Y
Sbjct: 70  NFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVAC---MNSSY 129

Query: 125 DQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHSGNDDDGDDDGGQNLWSF 181
           D   + N FMDEDL+FDMPNVLMNMAEGMLLSPPR     +  D DG   G   LW+F
Sbjct: 130 DNTNM-NGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of Sed0024103 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.0e-36
Identity = 88/177 (49.72%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 8   PVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAELNFPN 67
           PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG +A LNFP 
Sbjct: 17  PVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPG 76

Query: 68  SASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRG----SYSNSSGTNLGHNYGGRY 127
           S  S PVP S S +DI+AAA +AAA  G      E +     S S+ S     H      
Sbjct: 77  SVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHVDNDVG 136

Query: 128 DQGEVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWSF 181
                G +FMDE+ + +MPN+L NMAEGM+++PP +     +DD  ++   ++LW +
Sbjct: 137 SSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLWGY 192

[Close]

BLAST of Sed0024103 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 89/184 (48.37%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 4   SGHHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAEL 63
           SG H ++RG+R RN GKWVSEIREPRK  RIWLGT+P  EMAA AYDVAALALKGPDA L
Sbjct: 59  SGKHSIFRGIRLRN-GKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVL 118

Query: 64  NFPNSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRY 123
           NFP  A +   P S S +DI+AAA+ AA          E +          L     G+ 
Sbjct: 119 NFPGLALTYVAPVSNSAADIRAAASRAA----------EMKQPDQGGDEKVLEPVQPGKE 178

Query: 124 DQGE------VGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDG-DDDGGQN 181
           ++ E         +FMDE+ + +MP +L  MAEGML+SPPR   H   +DD  ++  G N
Sbjct: 179 EELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDN 231

[Close]

BLAST of Sed0024103 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 137.9 bits (346), Expect = 8.1e-33
Identity = 88/175 (50.29%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 7   HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAELNFP 66
           HP+YRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G  A LNF 
Sbjct: 45  HPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFA 104

Query: 67  NSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRYDQG 126
           +SA  L +P S    DIQ AA  AA A         T     +   T +   Y     +G
Sbjct: 105 DSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEG 164

Query: 127 EVGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHSGNDDDGDDDGGQNLWSF 181
                +MDE+ +F MP +L NMAEGMLL PP    NH   + DG+ DG  +LWS+
Sbjct: 165 AF---YMDEETMFGMPTLLDNMAEGMLLPPPSVQWNH---NYDGEGDGDVSLWSY 213

[Close]

BLAST of Sed0024103 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 136.3 bits (342), Expect = 2.4e-32
Identity = 84/175 (48.00%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 7   HPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGPDAELNFP 66
           HP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G  A LNF 
Sbjct: 51  HPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFA 110

Query: 67  NSASSLPVPASRSPSDIQAAATSAAAALGAAAAAMETRGSYSNSSGTNLGHNYGGRYDQG 126
           +SA  L +P +  P +IQ AA+ AA A         ++ +         G   G R  + 
Sbjct: 111 DSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEE 170

Query: 127 EVGNQF-MDEDLIFDMPNVLMNMAEGMLLSPPRFNNHSGNDDDGDDDGGQNLWSF 181
           + G  F MD++ +  MPN   NMAEGMLL PP       N +D D  G  +LWSF
Sbjct: 171 QNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEV---GWNHNDFDGVGDVSLWSF 222

The following BLAST results are available for this feature:

BLAST of Sed0024103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144756.1	2.0e-73	83.06	ethylene-responsive transcription factor ERF024 [Momordica charantia]	[more]
XP_038906274.1	7.8e-70	82.78	ethylene-responsive transcription factor ERF024 [Benincasa hispida]	[more]
XP_022946339.1	1.5e-68	81.32	ethylene-responsive transcription factor ERF024-like [Cucurbita moschata] >KAG65...	[more]
XP_023539533.1	9.5e-68	81.22	ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo...	[more]
XP_004138009.1	1.6e-67	81.22	ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hy...	[more]

BLAST of Sed0024103 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJR0	6.0e-49	65.17	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	8.5e-35	49.72	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJ90	2.3e-32	48.37	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9CAN9	8.8e-32	47.43	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93835	1.1e-31	50.29	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Sed0024103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUD0	9.6e-74	83.06	ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1G3I4	7.1e-69	81.32	ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=36...	[more]
A0A0A0LBA2	7.9e-68	81.22	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=...	[more]
A0A6J1L0H2	1.8e-67	80.66	ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1J6V1	5.1e-67	78.26	ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Sed0024103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36450.1	4.3e-50	65.17	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	6.0e-36	49.72	Integrase-type DNA-binding superfamily protein	[more]
AT5G52020.1	1.6e-33	48.37	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	8.1e-33	50.29	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	2.4e-32	48.00	C-repeat-binding factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 10..21 score: 65.15 coord: 32..48 score: 66.42
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 9..72 e-value: 8.9E-34 score: 128.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..58 e-value: 7.3E-13 score: 48.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 9..66 score: 23.077003
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 10..68 e-value: 8.6139E-32 score: 107.357
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 9..68 e-value: 5.9E-25 score: 89.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..181
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 3..180
None	No IPR available	PANTHER	PTHR31985:SF121	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024	coord: 3..180
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024103.1	Sed0024103.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity