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Sed0023994 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAACCTCCGGATCTTGCCTTCTCATTTCCTTATTTCTTTTCTTCCATTCTCTCAAACTTTGCTATATATTCTCTACCATTTCACCTCCAACTCTTTTCTCAACTAAACACACATTTCTCTCTCATTACTAATATGGCTTCATGGAAGAAAACCATCACCACCCCATTCCGAAAGGCGTGCACCATCTTCAACCAGAACCCGAGAGACCCCAAAAAATCTCATTCCAACTCAGGTGAGGTCTCTCGAGATTTTTTTTTTTTAGTTCAACAACAATTAGGAGTGAATTTGAAGTTCATGAATTTTAATCACGAAAACAGACTTATGTCGGTTGAGCTAATTATTCTTATTTGGGATTTTGCAGAGCAAGAGAAGCGATTGGATGTAAGAAATCTTCAAGGAGAGGTGATGGCATGTGGATATGAAGACGTGCATGTGATGTGGTCTATTTTAGACAAGGCCAATTCTATTGCCGCCACTAATGCTACCGGCTACAATATATCTTCGTAACCGACGTAGTTTTCGCCACGATCGATCAATGTCGGTTTCTTAATTGTTGTATATAAAGCATAATATGTCACTCTCTCTATGTAATTTCTGAGTGGATGATTTTGTTATGTGTAGGGAAGGAATCCCCATGATTTGAAGCTCTTAATCATGGTGAGATTTAAGGTTTTTATTACCTAATTTTTAATTAATGCAAAAAAAAAAAACTAAATCTCTTTCTCTCTCTATCTTGGAAATGGAGCCTTATCTCTGAAAAGATATTCAGGTCTGATTGGTTGGTCATATGTAAGTTATACTTTTATGTACCACTTTCAAGGACTGAAATTGAGAGGATATGAAAAAACTTGGGTTTCTTAGAATTATTTCTTTCTTTTGTTGTAAATTAAACTTATTATAATTAAATCCTTTTTGTTTGTTTTCTTAGAA CTCAACCTCCGGATCTTGCCTTCTCATTTCCTTATTTCTTTTCTTCCATTCTCTCAAACTTTGCTATATATTCTCTACCATTTCACCTCCAACTCTTTTCTCAACTAAACACACATTTCTCTCTCATTACTAATATGGCTTCATGGAAGAAAACCATCACCACCCCATTCCGAAAGGCGTGCACCATCTTCAACCAGAACCCGAGAGACCCCAAAAAATCTCATTCCAACTCAGAGCAAGAGAAGCGATTGGATGTAAGAAATCTTCAAGGAGAGGTGATGGCATGTGGATATGAAGACGTGCATGTGATGTGGTCTATTTTAGACAAGGCCAATTCTATTGCCGCCACTAATGCTACCGGCTACAATATATCTTCGTAACCGACGTAGTTTTCGCCACGATCGATCAATGTCGGTTTCTTAATTGTTGTATATAAAGCATAATATGTCACTCTCTCTATGTAATTTCTGAGTGGATGATTTTGTTATGTGTAGGGAAGGAATCCCCATGATTTGAAGCTCTTAATCATGGTGAGATTTAAGGTTTTTATTACCTAATTTTTAATTAATGCAAAAAAAAAAAACTAAATCTCTTTCTCTCTCTATCTTGGAAATGGAGCCTTATCTCTGAAAAGATATTCAGGTCTGATTGGTTGGTCATATGTAAGTTATACTTTTATGTACCACTTTCAAGGACTGAAATTGAGAGGATATGAAAAAACTTGGGTTTCTTAGAATTATTTCTTTCTTTTGTTGTAAATTAAACTTATTATAATTAAATCCTTTTTGTTTGTTTTCTTAGAA ATGGCTTCATGGAAGAAAACCATCACCACCCCATTCCGAAAGGCGTGCACCATCTTCAACCAGAACCCGAGAGACCCCAAAAAATCTCATTCCAACTCAGAGCAAGAGAAGCGATTGGATGTAAGAAATCTTCAAGGAGAGGTGATGGCATGTGGATATGAAGACGTGCATGTGATGTGGTCTATTTTAGACAAGGCCAATTCTATTGCCGCCACTAATGCTACCGGCTACAATATATCTTCGTAA MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS Homology
BLAST of Sed0023994 vs. NCBI nr
Match: XP_038898749.1 (uncharacterized protein LOC120086267 [Benincasa hispida]) HSP 1 Score: 141.7 bits (356), Expect = 2.7e-30 Identity = 68/81 (83.95%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Sed0023994 vs. NCBI nr
Match: XP_008439007.1 (PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo] >KAA0052144.1 uncharacterized protein E6C27_scaffold1589G00140 [Cucumis melo var. makuwa] >TYK30595.1 uncharacterized protein E5676_scaffold60158G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29 Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of Sed0023994 vs. NCBI nr
Match: XP_022980000.1 (uncharacterized protein LOC111479526 [Cucurbita maxima] >XP_023527753.1 uncharacterized protein LOC111790878 [Cucurbita pepo subsp. pepo] >KAG6582137.1 hypothetical protein SDJN03_22139, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.5 bits (345), Expect = 5.1e-29 Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Sed0023994 vs. NCBI nr
Match: XP_022138108.1 (uncharacterized protein LOC111009357 [Momordica charantia]) HSP 1 Score: 137.5 bits (345), Expect = 5.1e-29 Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Sed0023994 vs. NCBI nr
Match: XP_004147637.1 (uncharacterized protein LOC101206709 [Cucumis sativus] >KGN57215.1 hypothetical protein Csa_010169 [Cucumis sativus]) HSP 1 Score: 135.2 bits (339), Expect = 2.5e-28 Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Sed0023994 vs. ExPASy TrEMBL
Match: A0A5A7U9W0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold60158G00010 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.0e-30 Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of Sed0023994 vs. ExPASy TrEMBL
Match: A0A1S3AXS6 (uncharacterized protein LOC103483930 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483930 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.0e-30 Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of Sed0023994 vs. ExPASy TrEMBL
Match: A0A6J1IUX8 (uncharacterized protein LOC111479526 OS=Cucurbita maxima OX=3661 GN=LOC111479526 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.5e-29 Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Sed0023994 vs. ExPASy TrEMBL
Match: A0A6J1CC51 (uncharacterized protein LOC111009357 OS=Momordica charantia OX=3673 GN=LOC111009357 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.5e-29 Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Sed0023994 vs. ExPASy TrEMBL
Match: A0A0A0L5H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171230 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28 Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Sed0023994 vs. TAIR 10
Match: AT3G17580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48330.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.9 bits (224), Expect = 5.1e-19 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of Sed0023994 vs. TAIR 10
Match: AT1G48330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 85.5 bits (210), Expect = 2.1e-17 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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