Sed0023985 (gene) Chayote v1

Overview


Name	Sed0023985
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transmembrane protein 208 homolog
Location	LG11: 4596200 .. 4601348 (-)
RNA-Seq Expression	Sed0023985
Synteny	Sed0023985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCCAGTCAAGTTGCTCCCACAAGAAACTCACCCTCGATTTTGAAGTCATCCGTACGAAATCCCCCGAAACCATTGTTCTTCGTCTTCGGTTCACTCGGAGCGATCGGCGATCAAGATTTTGGTGCGATTTGAGGAGCAGTTTGGAAATCCAATGGCGAATCAGGGTGCGAAGAAGCGCAAGGAAGAGAACGCTCGCCATATCGCCAATCTCCGCCGCCTCATCATCGCCTGCAACGTACGCACACACCTCTCTTCCATGCATCATTTCTCTCACTGTATCTGTTTTTCTTAATTTTGTATGCTTGTTGGAACATTCCTTGAGTTTCTTATAGGAATCGATTGAATTTTCCTTTGCGTCATGTGTTTCAATTTCGGCTAATTTGACTTCGAATTCGAGCTCGAAACCAGCGATAATCGATTGCGTCTAGTGTTCTTAATTGAGTCTAATATGCTTGTCACTGAAATCGGAACAACAACTAAACAAAATACGATGATTTTTGTGTTCATTGACAATGTGTTAGGCTTAGTTATGTCCACATGCAGAGTAGAGAGTGATATTATTGATCTCGGAGATACACAGTGTCGATCAAGTGAGGCTATGGGGCTAGGGTTTTAAGAGTGTTTATATTGTGCACTCTTATAGACCCCTATTTCAAAATATGGCTCAAATATATAAAAGACTAAAATCCAAAAGCATAAACCCAAGCAAATGCATGTTCAAATGTGGGCAAGGTAGTCCCCAAAGAGTGGCACAGTGGTTGAAGACTTCGGTTTTGAGAGTATGTTCCCTTCAAGGTCTCAGGTTTGAGACTCTCCTATAACATTACTCTTTCGATGTCTCTAGTGCCTGGCCTAGGGAGTAGGGACTGGCGCAGTTATCCTTGTTTAAAAAAATGTGTGCAAGGTAAAAATCTCCAAATGCACATTCTCCAAATCGACTTATGTGAATTAAAATTGAGGCAGGTATCTACGAATGTGTGCAAGAACAATAGGAATGTAAGGTCAAGGAAGTTATGGAGTAATTTCTTTAGAGAAATATGAGATGATTATAAATTTGATGGATGGAGAATTAGTTTAGATTATCTATGTTTCTTCCTGTAAGTTTAGAGCTACTTTTGGCTTGTAAATTATTGTTTACGATCACTGAGCCCCCATTTGATAATCATTTTGTTTTTAATTTTTGGTTTTTGAAATTTAAGCCTACATCAACTATCATATCATATGTTTTTTTCTACATGGATATCTACATCTTACCTATATTTGTAGAAACCAAACCAAAATTTGGAAAAAAAAAAAATAGTAGCTTCCAAAAGTTTATTTTTGTTTTTAAAAGTTAGTTATCATTCATCTACTTTCTTAAGAAAAGATGAATACATTGTAGGAAAGGTGAAAAACATGGTAGGAAAAGTGGAACATATTGTAGGAAATTTGAGTGAGAATAGGCTTGATTTTTAAAAACCAAAAACCAAATGGTTATCAAACGGGACTTAAATTTTTTTATAAACAGTTGTCAAATGGATAAGCAATTTTCTGAGCCTATCCTCAAACTTATTCATGTCAATTTGTTAACTTTCTATATGTGACTGTTCATAAAGCCTAGGACACCATGTTGCTTAGTGGAACTAGTACTAACTTCATTGTTTTGTTGTTTGTGTAGGCTATCTATATCTTGATTCGGATGCTGATTTTTCATTCAAGTTTCACTTGGAAGCACTGGATTGGTCTGGTTGTCACATCCGCAGCTTATTTTATCCCTTACAACCAACTTGCCAATATGGCAACCCCGTCCTATGGTGATGATGGAGAACTTCTAGATGGTGGGTTTGATATGAGTACTGGTGGAATTTGTGGGTATGTCTTCAGTCTTCTTTATGCTTCATGTCATTTTTTATCTTCTTTATATAGAGTTTTGAAACAAGGGTAACCACGCTCATTTCTAGGCCAGGCACCGGGAGACATCGAAAGAGTAATGTCACAGCTGAGTCTCGAACCTGGGACTTTGAGGGTAATACCCTCAAAGCTCAAGTCTTCAACCACTGTGCCACCGCTTGGGGACATCTTCTTTATATAGAGTATAATTGTTGAATATAGTCCTGACATATTTACTTGTTGTGTGACCAAATTTTAAGTGATCTGTAGCTCTGAAAACCTGCTAAGAAATGGTATGATATTGTTCACCATAGATCAAATTTTGTCAGGAAGCTGAAGCTATTTTTCTTGGTTGTCATTTCTTTTCCTCGTGGATTTCATGACTTAAATTCACTCTCATCCATAGCATTGTTAATTGATATTAGTATACTTGTTAATTGTCTTAAGAACTTTTTTTTTTAAGTGCAATTGGCTTAACAACTCTCCATAAGGGCAATGTACATAAATATCATGGTTGTTTCATGTTTGAAAAAGTCACTTTACTGGATAATCTTTAACATTTCTTTCTCGAGGAAATTTCAGATGGGATATAGACATATAAGCAAGCTTGCAGCTTAAAAAGAAATTGAATTGAATTTTTTTGGGAAATTGTCTTGCTCCACTGATGATTGCTTTGATAAATTGATATGTTCGTTAGATCATCCAAGTGACGAACAAATCCATGCTTATGTTTTTTACCTTATAAAATACTGGGAGGTTTTGTGAGGGCGTTTCCATTTGGTTGTAAATGTGGTGGAGTTTGGTGGGATTTGGAAGACTATAGAAATTGGGTTTAAATCATTTCAACCAGGTGATTCTAGTTCTGAAGATAACAAATTTCCAGGTGTAAAAATAGCCAAATTTCACCATATCTCTGAATTTTACAATCTGTTGCATTTCCAAGTTTCACCGCTTCGTTGTCTGAAGGAAGGTCAGAAATCCTACTAACGCAAATACAATGTAGTGCTTGCTAGGTCAGGTTTTAGGCCATCTGACTAGCAAATTAACTTCTTTGTGATTTCAACTTTGGAAAATCTCACTCTCCAAGGGGTGGCACAGTGGTTAAAAACTTGGACTTTGAAGGTATGCTCCCTTCAAGGTCTCAGGTTCGAGACTCACCTATGATATTGCTTTTTCGATGTCTCCGTTGTCTGGCCTAGAAACGAGCGTGGTTACCCTTGTTTCAAAAAAAAAAAAAACTTTGGAAAATCTCATTGTAGTAACTAGTAACATTGCGACAAGGAGCTCTGGTTTTTTATAATACGGATGTAGTAATCGACTTCAAAGCTACACTGGTTGTGAATCCTTAGATTCATAATTTCATATGGCTTCTTATAAAAAAAAAGTGGGTATGACTACAAGTTCTTTGTAACCCCACGGCACTGACATTGTGCGAAAGATTCACCCTAGAACAGTTATCATGTAACTGCCATAGTGAGAGTTGGATACGGGTCTAGGGTTCAATCCACCACCCTCTATGGTTGGAACCCGATCATTGTATCTATATCTAGCCTTCCATCACGGTTTATCGGTATTTCAATAATTAATTGAAACATTTGCCCTGAAAGAGCAGCCTTCTTGGTAGAGACTTGGAGTCTCCAAGGTATGCTTCTTTAGAGGTCTCAGGTTTGAAACCTGCAAGTGAGCTTCATGGTAAAATCGCTTGTTGTCTCTCAGGTCTGGATCTTGGGACGAGCATGGGTGTGTTCCTAGATATTTAGTGGTGCGAAACTTCGATTCCCAGTTATCAAAATAATAATAATAATAATTAATGCAAACATCTTGATGGGTTGTGTTGTTTTTTTGCAGCTACTTCCATGATGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTATACCTACCTTGTGGTAAGATCCAAATACTTTTGAAATTGAACTTATACATATTTAATGTAATGTACAGGCCTAATCCTGGTATTTGGGCGTGAAATAATAGTGTCTATGATGTATCTTTCTGAAATGACTTTAATTATACATCTATTTATAAATATGCCTCTGTATCTCTAAACATCACTTTTATTGTTATGCAAACTATATTGAGACTGAGTCGTTGTGTTTATTATTCATGGAGGCAATGCTTTAATATAGAATATACAATAGTTACCCTAGCTATCAATGAGCCTAAAGGGCTTAACACTAAAAATATATAATAAATCTGTTAAAAGATGAAAATTCAAATTCTCTCAATTTTTCATTTAATAATGAACCCAACAATAAATTTAAATAGAGTACTAATTATAAAAAGAAACTATAATATTTAATCATAAAAAGGAAAAGATATAAAATAATATTTAATCTAATGTTAAATCAAATAAATAATTAAAAAAGATAAAAATACTATTTTACTAAAATTAACATAAAATAACAAGATCAATATGCGATATACATAATAAATAACTCTAACACTTATATTACTAAATGTTTGTGCATCTGATTGAAAATTCAAGTTAAAGTAGGTATACTTCACTAGTATTCAAATGTTCATTTTCCTATTGCTCTGGCTGCAGATTCCAGCATTTGGGGTATACAAATCTTCTGGTTTCATTAAGGGATTGTTGTCGCGAGGTTCTGAGGTAAACATGATTTCAGCATTTATAAAAAGCTTCAGTCTTCTCTTATCATTCTCTTACCATTTAGGCGTATACCGTGTGTCGTTTAGGATGAACCCGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTCGTGAAGACCAAGAATAGATAATCTTCTCTTCTAAATTAATCGGAATCAACTGGGCGCTATCAACTTAAGTTATCAGATGCAAATTCGAGCAGATGGCGTCATGTTTTAGGTACCATTTGAAGTTAGTTTAAGTGAAAAGTTTGTGTATTAATCTGACTAATTATAACAGGAATAAGGGGAAGAAGAATATCACTGTAACCTCCATTTTGTCAACTGAAGATTTAGAAGTCCCTGTTTCCTCTTTCAAAATGACATCACAGATTCACAACTTTTGCAGCTTTGGTTTTATTTTAGAAGAGACAGGCCTAGAAGGATATTAAAGGAATAGTTTAAATCTCTTTTAAATTTGTTTCTACACATTTTTGCTTCCACATTCTAATTTTTTATCCCACAGTATTTGTGTCTACGTTCTCCCTACCCTCCAAAGATTTGAGATTTTAATTTGAATTTGGGATTTAGCA

mRNA sequence

ATTCCCAGTCAAGTTGCTCCCACAAGAAACTCACCCTCGATTTTGAAGTCATCCGTACGAAATCCCCCGAAACCATTGTTCTTCGTCTTCGGTTCACTCGGAGCGATCGGCGATCAAGATTTTGGTGCGATTTGAGGAGCAGTTTGGAAATCCAATGGCGAATCAGGGTGCGAAGAAGCGCAAGGAAGAGAACGCTCGCCATATCGCCAATCTCCGCCGCCTCATCATCGCCTGCAACGCTATCTATATCTTGATTCGGATGCTGATTTTTCATTCAAGTTTCACTTGGAAGCACTGGATTGGTCTGGTTGTCACATCCGCAGCTTATTTTATCCCTTACAACCAACTTGCCAATATGGCAACCCCGTCCTATGGTGATGATGGAGAACTTCTAGATGGTGGGTTTGATATGAGTACTGGTGGAATTTGTGGCTACTTCCATGATGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTATACCTACCTTGTGATTCCAGCATTTGGGGTATACAAATCTTCTGGTTTCATTAAGGGATTGTTGTCGCGAGGTTCTGAGGATGAACCCGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTCGTGAAGACCAAGAATAGATAATCTTCTCTTCTAAATTAATCGGAATCAACTGGGCGCTATCAACTTAAGTTATCAGATGCAAATTCGAGCAGATGGCGTCATGTTTTAGGTACCATTTGAAGTTAGTTTAAGTGAAAAGTTTGTGTATTAATCTGACTAATTATAACAGGAATAAGGGGAAGAAGAATATCACTGTAACCTCCATTTTGTCAACTGAAGATTTAGAAGTCCCTGTTTCCTCTTTCAAAATGACATCACAGATTCACAACTTTTGCAGCTTTGGTTTTATTTTAGAAGAGACAGGCCTAGAAGGATATTAAAGGAATAGTTTAAATCTCTTTTAAATTTGTTTCTACACATTTTTGCTTCCACATTCTAATTTTTTATCCCACAGTATTTGTGTCTACGTTCTCCCTACCCTCCAAAGATTTGAGATTTTAATTTGAATTTGGGATTTAGCA

Coding sequence (CDS)

ATGGCGAATCAGGGTGCGAAGAAGCGCAAGGAAGAGAACGCTCGCCATATCGCCAATCTCCGCCGCCTCATCATCGCCTGCAACGCTATCTATATCTTGATTCGGATGCTGATTTTTCATTCAAGTTTCACTTGGAAGCACTGGATTGGTCTGGTTGTCACATCCGCAGCTTATTTTATCCCTTACAACCAACTTGCCAATATGGCAACCCCGTCCTATGGTGATGATGGAGAACTTCTAGATGGTGGGTTTGATATGAGTACTGGTGGAATTTGTGGCTACTTCCATGATGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTATACCTACCTTGTGATTCCAGCATTTGGGGTATACAAATCTTCTGGTTTCATTAAGGGATTGTTGTCGCGAGGTTCTGAGGATGAACCCGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTCGTGAAGACCAAGAATAGATAA

Protein sequence

MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFIPYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR

Homology

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BLAST of Sed0023985 vs. NCBI nr
Match: XP_022969670.1 (transmembrane protein 208 homolog [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 7.0e-84
Identity = 160/173 (92.49%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACNA YIL+RMLIFHSSFTWKHWIGL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+NM TP+YGD+GELLDGGFDM+TGGICGY HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMGTPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSG IKGLLS+GSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

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BLAST of Sed0023985 vs. NCBI nr
Match: XP_038889500.1 (transmembrane protein 208 homolog [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 7.0e-84
Identity = 160/173 (92.49%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACN IYIL+RMLIFHSSFTWKHWIGL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHVANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL  MA P+YGDDGELLDGGFDMSTGGICGY HDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFG+YKSSG I+GLLS+GSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGIYKSSGLIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

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BLAST of Sed0023985 vs. NCBI nr
Match: XP_022937469.1 (transmembrane protein 208 homolog [Cucurbita moschata] >KAG6586034.1 Transmembrane protein 208, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.5 bits (820), Expect = 9.1e-84
Identity = 160/173 (92.49%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACNA YIL+RMLIFHSSFTWKHWIGL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+NMA P+YGD+GELLDGGFDM+TGGICGY HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSG IKGLLS+GSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

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BLAST of Sed0023985 vs. NCBI nr
Match: KAG7020810.1 (Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 158/173 (91.33%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACNA YIL+RMLIFHSSFTWKHWIGL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+NMA P+YGD+GELLDGGFDM+TGGICGY HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           +IPAFG+YKSSG IKGLLS+GSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 MIPAFGIYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

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BLAST of Sed0023985 vs. NCBI nr
Match: XP_023536815.1 (transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 159/173 (91.91%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACN  YIL+RMLIFHSSFTWKHWIGL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNTTYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+NMA P+YGD+GELLDGGFDM+TGGICGY HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSG IKGLLS+GSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

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BLAST of Sed0023985 vs. ExPASy Swiss-Prot
Match: Q54UB0 (Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem208 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-20
Identity = 63/173 (36.42%), Postives = 98/173 (56.65%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MAN GAKKRK +N + +  +R ++ A    YIL R++    +F    W   +  +A    
Sbjct: 1   MANSGAKKRKTQNEKELFKVRLIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNMF 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
            Y  + +M   +Y ++GEL+DGG D++ GG+  Y+ D+IY+   +Q + ++S K  Y  L
Sbjct: 61  AYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLIL 120

Query: 121 VIPAFGVYKSSGFIKG--LLSRGSEDEPEDEKTRKKREKMEKK--ASRVKFVK 170
           VIPAF ++K      G  L SR  + +   E+  K+REKMEKK    +VK+VK
Sbjct: 121 VIPAFAIFKIWKTFIGPYLASRNQQQQQPQEEKSKRREKMEKKQEKQKVKYVK 173

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BLAST of Sed0023985 vs. ExPASy Swiss-Prot
Match: Q6NYP0 (Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18
Identity = 58/167 (34.73%), Postives = 96/167 (57.49%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NAIYI + +L+F++S ++  W  L+   A Y  
Sbjct: 7   VGTKGKKQIHEENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVG 66

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMS-TGGICGYFHDVIYITSFVQIMSILSGKFWYTY 120
            Y  ++ MA P++ +DG LLDGG D++   G+  +  DVI +T+ VQ++S LS  FWY +
Sbjct: 67  SYRSMSAMAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWYLW 126

Query: 121 LVIPAFGVYKS-SGFIKGLLSRGSEDEPED-EKTRKKREKMEKKASR 165
           L+ PA  ++     F+    S  S+  PE+ EK  KK+ + E++  R
Sbjct: 127 LLAPARALHLLWVNFLGPWFSADSQAAPEENEKNDKKQRRQERRQMR 173

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BLAST of Sed0023985 vs. ExPASy Swiss-Prot
Match: Q3SZZ5 (Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.9e-14
Identity = 47/162 (29.01%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NAIY L+ +++F+SS ++  W+ L+ + A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGA 66

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMS-TGGICGYFHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ +++MA  ++ +DG L+DGG D++   G+  +  DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKK 162
           L+ P   +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGAPAPEHNEKRQRRQERR 168

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BLAST of Sed0023985 vs. ExPASy Swiss-Prot
Match: Q9CR96 (Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NAIY L+ ++ F+SS ++  W+ L  + A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGA 66

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMS-TGGICGYFHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ +++MA  S+ +DG L+DGG D++   G+  +  DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKK 162
           L+ P   +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGAPAPELNEKRQRRQERR 168

[Close]

BLAST of Sed0023985 vs. ExPASy Swiss-Prot
Match: Q9BTX3 (Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.9e-13
Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NAIY L+ ++ F+SS ++  W+ L  + A Y  
Sbjct: 7   VGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGA 66

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMS-TGGICGYFHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ +++MA  ++ +DG L+DGG D++   G+  +  DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFW 126

Query: 121 LVIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKK 162
           L+ P   +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGTPAPEHNEKRQRRQERR 168

[Close]

BLAST of Sed0023985 vs. ExPASy TrEMBL
Match: A0A6J1I0K5 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468625 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-84
Identity = 160/173 (92.49%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACNA YIL+RMLIFHSSFTWKHWIGL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+NM TP+YGD+GELLDGGFDM+TGGICGY HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMGTPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSG IKGLLS+GSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of Sed0023985 vs. ExPASy TrEMBL
Match: A0A6J1FB96 (transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111443871 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.4e-84
Identity = 160/173 (92.49%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACNA YIL+RMLIFHSSFTWKHWIGL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+NMA P+YGD+GELLDGGFDM+TGGICGY HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSG IKGLLS+GSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of Sed0023985 vs. ExPASy TrEMBL
Match: A0A6J1KBQ8 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACN IYIL+RMLIFHSSFTWKHW+GL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLA MA P+YGDDGELLDGGFDMSTGGICGY HDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSG IK LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of Sed0023985 vs. ExPASy TrEMBL
Match: A0A6J1G433 (transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACN IYIL+RMLIFHSSFTWKHW+GL+VTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLA MA P+YGDDGELLDGGFDMSTGGICGY HDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSG IK LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of Sed0023985 vs. ExPASy TrEMBL
Match: A0A0A0LH45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036710 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.3e-83
Identity = 159/173 (91.91%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACN IYIL+RMLIFHSSFTWKHWIGL+ TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL  MA P YGDDGELLDGGFDMSTGGICGY HDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIP FGVYKSSGFI+GLLS+GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of Sed0023985 vs. TAIR 10
Match: AT2G23940.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-69
Identity = 129/173 (74.57%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRKEENA+H+A LRR+IIA NA+Y ++RMLIF+SSFTWKHWIGLV+TS AY  
Sbjct: 1   MANQGAKKRKEENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAF 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PY QL  MA PS  DDGEL+DGGFDM+TGGICGY HDVIYIT FVQ+ SI++GKFWYTYL
Sbjct: 61  PYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYK+SG I+G +S+GSE   EDEK+RKKREKME+KASR + VKT+ R
Sbjct: 121 VIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Sed0023985 vs. TAIR 10
Match: AT4G30500.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-64
Identity = 123/173 (71.10%), Postives = 143/173 (82.66%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHIANLRRLIIACNAIYILIRMLIFHSSFTWKHWIGLVVTSAAYFI 60
           MANQGAKKRK+ENARH+A LR ++I CN +Y+L+R++I HSS TWK+WIGLV+TS  Y I
Sbjct: 1   MANQGAKKRKDENARHMAKLRLIMILCNILYVLVRVIISHSSHTWKNWIGLVLTSLGYGI 60

Query: 61  PYNQLANMATPSYGDDGELLDGGFDMSTGGICGYFHDVIYITSFVQIMSILSGKFWYTYL 120
           PY  L  MA PS  D GELLDGGFDMST G+CGY HDV+YIT FVQ+ SI+SGKFWY YL
Sbjct: 61  PYKLLHQMAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKFWYAYL 120

Query: 121 VIPAFGVYKSSGFIKGLLSRGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFG YK+SG IKGLLS GSE   EDEKTRKKREKME+KASR + VKT++R
Sbjct: 121 VIPAFGAYKASGLIKGLLSHGSEGGVEDEKTRKKREKMERKASRGQVVKTRSR 173

The following BLAST results are available for this feature:

BLAST of Sed0023985 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969670.1	7.0e-84	92.49	transmembrane protein 208 homolog [Cucurbita maxima]	[more]
XP_038889500.1	7.0e-84	92.49	transmembrane protein 208 homolog [Benincasa hispida]	[more]
XP_022937469.1	9.1e-84	92.49	transmembrane protein 208 homolog [Cucurbita moschata] >KAG6586034.1 Transmembra...	[more]
KAG7020810.1	2.6e-83	91.33	Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023536815.1	2.6e-83	91.91	transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0023985 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54UB0	1.5e-20	36.42	Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem20...	[more]
Q6NYP0	1.8e-18	34.73	Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1	[more]
Q3SZZ5	7.9e-14	29.01	Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1	[more]
Q9CR96	1.8e-13	29.63	Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1	[more]
Q9BTX3	3.9e-13	29.01	Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1	[more]

BLAST of Sed0023985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0K5	3.4e-84	92.49	transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468625 PE...	[more]
A0A6J1FB96	4.4e-84	92.49	transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111443871 ...	[more]
A0A6J1KBQ8	1.3e-83	92.49	transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE...	[more]
A0A6J1G433	1.3e-83	92.49	transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 ...	[more]
A0A0A0LH45	6.3e-83	91.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036710 PE=3 SV=1	[more]

BLAST of Sed0023985 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23940.1	1.8e-69	74.57	Protein of unknown function (DUF788)	[more]
AT4G30500.1	2.9e-64	71.10	Protein of unknown function (DUF788)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	SRP-independent targeting protein 2/TMEM208	PFAM	PF05620	TMEM208_SND2	coord: 1..162 e-value: 2.9E-55 score: 186.6
IPR008506	SRP-independent targeting protein 2/TMEM208	PANTHER	PTHR13505	TRANSMEMBRANE PROTEIN 208	coord: 1..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..165
None	No IPR available	PANTHER	PTHR13505:SF8	BNAA01G06570D PROTEIN	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023985.1	Sed0023985.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006624	vacuolar protein processing
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005773	vacuole