Sed0023952 (gene) Chayote v1

Overview


Name	Sed0023952
Type	gene
Organism	Sechium edule (Chayote v1)
Description	REF/SRPP-like protein At1g67360
Location	LG06: 1061819 .. 1063753 (+)
RNA-Seq Expression	Sed0023952
Synteny	Sed0023952

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCGAAGTATGATTCATCGAGAAAAAAAAAAGGCGAATACAAAGAAGAACACTGAAGAAACAAACGTTCAGTGTAAGATTCTTGGATTCTCTCTACGAATAAACTTTTTTTTTTGTTCTTGATTTGATTTTTTGTTGTTGTTGTTGTTGTTGATGAATTGATTGATTTTCAGATGGAGAACGAAAGCAGGAATTTGGAGTTGAAGCACCTAGGGTTTGTGAGGATCGCTGTGATTCATACGATTGCTTGTGTTTCGAATCTGTACGATTATGCGAAGAAGAACTCTGGTCCTTTGAGATCTGCGGTTGAAAGTGTGGAGAGCGCTGTTGATACTGTTGTAGCGCCTGCGTATGAGAAGCTTCGAATCGTACCTGATGATGTTCTTGTTTTTCTTGACGAGAAGGTATTCTTTGCTTTCTCTTAATCGCTTGAAATCTGTGATTACTTTCTTGGATCAGTCGGTTTTGGTCGATTGATTGTTAGTTGGATTAGGCATCTCTGCAATCTAGATTTCTCGGATGATTTTAGTTTTTCAGCTTCTTCTATATGATGAGATTTCGAGAAATGATTTTTGCTTCAGATTGAATTGAATCAGTGTTTCTGAAGTATGGAATTGATGCATGTTTTGAAATTTGAGCTAGTCCAAAGCTTATTGATACGGTTGGAATCTGAATTTCATCGATCAATCTAGTTTTTTAACAACTGTGCATTGTCTTTTTTCTTTTCCTTGGCTTATGTTTACTAGTCCTGTTGCTTTCTTTCATTCACATGGAACAAGATTGGTGAAGATGAAATGCCTAACTAGTTAAAATAGCATTTTGGTTCTTGTACTTTTAAGACTGATTTCATTTTGGTTCATTACTTTTGATAAAGCTTTAAATTGATTCATATGAAATTGAAGAAATTTGCAGGCAGAGAGCTAATAGAGAGGTCTTGTTAAAGAAAAATAATATGAAATCTATCATTCTACTGATTTTGAGCTATATTGGAAGTACAATAACTAAAATTGAAAATTTGAAAGCATATGGACCTAAATATTGCAAAATTCAAAGAACATGGACGAAGATTTATTTTAACCTTCATAATTTATCAAAGGGGCTGTTATAGTATACACTATAGACTGGTGGGGATTTTGTTGCAGGTTGACAAAGCAACACATGAGTTTGACAAACGTGCTCCTCCTCTGGCAAAGCAAGCCGTTCAGATTATGCAGCATTTTGCTGAAAAGGCTGCTCGAACTGGCCAAGAGCTCGTGAGCGAGTTTCAAACGGGTGGACCACGTTCAGCATTTCACTATGCAGCAAAGGAGTACAAGCAGTTGGTTCTAAACCAAGGAGTGAAGATTTGGGTGGGGCTCAACCGGCTTCCATCGTTCCACAAGGTGGCGGACATGGCGGTGCCATCGGCGGCTCAGTGGCTGGAGAAGTACAACAGCAAGGTGAAAGATATGAGGCAGAAGGGGTACTACGTGTTCGCCTATTTTCCTGAAGTTCCTGTGAGTGAGATAGCCAAGGCATTTAAGCAGGGAGAACCCAAGAGCAAGGAAGAGACACCAGCACCTACTTCTACACCTGCTCCTGCATCTACTACTGCACAAGCTCCACCGGAGCGTAAACCGGGATCAGACTCCGAATCGGAATCGGGTTCGGTTTCAGTTTCTGAATAGAAAGAAAATGTTTGTAGTTTGATTAGCTAATCATCTGGTTTGCAAGAGTATGATGGTTCATGATGTAGGAGCACAAAGTTGATGAATAGCAGCTTTTATGGAAATTTCAAGAAGTTTGATATGAAGTATTGGAAGGCTGTAGATAAAGTGTGAATGGCTTTTGATGTTGATAGGTTTGAATCTTTGATGAAAATGGTTGCTAAGGGCAATGCCTGTAATATGAACAATAAAGTTTTAAAATGTTATGCTTGGTTTTTAGTACATAAAA

mRNA sequence

GATCGAAGTATGATTCATCGAGAAAAAAAAAAGGCGAATACAAAGAAGAACACTGAAGAAACAAACGTTCAGTATGGAGAACGAAAGCAGGAATTTGGAGTTGAAGCACCTAGGGTTTGTGAGGATCGCTGTGATTCATACGATTGCTTGTGTTTCGAATCTGTACGATTATGCGAAGAAGAACTCTGGTCCTTTGAGATCTGCGGTTGAAAGTGTGGAGAGCGCTGTTGATACTGTTGTAGCGCCTGCGTATGAGAAGCTTCGAATCGTACCTGATGATGTTCTTGTTTTTCTTGACGAGAAGGTTGACAAAGCAACACATGAGTTTGACAAACGTGCTCCTCCTCTGGCAAAGCAAGCCGTTCAGATTATGCAGCATTTTGCTGAAAAGGCTGCTCGAACTGGCCAAGAGCTCGTGAGCGAGTTTCAAACGGGTGGACCACGTTCAGCATTTCACTATGCAGCAAAGGAGTACAAGCAGTTGGTTCTAAACCAAGGAGTGAAGATTTGGGTGGGGCTCAACCGGCTTCCATCGTTCCACAAGGTGGCGGACATGGCGGTGCCATCGGCGGCTCAGTGGCTGGAGAAGTACAACAGCAAGGTGAAAGATATGAGGCAGAAGGGGTACTACGTGTTCGCCTATTTTCCTGAAGTTCCTGTGAGTGAGATAGCCAAGGCATTTAAGCAGGGAGAACCCAAGAGCAAGGAAGAGACACCAGCACCTACTTCTACACCTGCTCCTGCATCTACTACTGCACAAGCTCCACCGGAGCGTAAACCGGGATCAGACTCCGAATCGGAATCGGGTTCGGTTTCAGTTTCTGAATAGAAAGAAAATGTTTGTAGTTTGATTAGCTAATCATCTGGTTTGCAAGAGTATGATGGTTCATGATGTAGGAGCACAAAGTTGATGAATAGCAGCTTTTATGGAAATTTCAAGAAGTTTGATATGAAGTATTGGAAGGCTGTAGATAAAGTGTGAATGGCTTTTGATGTTGATAGGTTTGAATCTTTGATGAAAATGGTTGCTAAGGGCAATGCCTGTAATATGAACAATAAAGTTTTAAAATGTTATGCTTGGTTTTTAGTACATAAAA

Coding sequence (CDS)

ATGGAGAACGAAAGCAGGAATTTGGAGTTGAAGCACCTAGGGTTTGTGAGGATCGCTGTGATTCATACGATTGCTTGTGTTTCGAATCTGTACGATTATGCGAAGAAGAACTCTGGTCCTTTGAGATCTGCGGTTGAAAGTGTGGAGAGCGCTGTTGATACTGTTGTAGCGCCTGCGTATGAGAAGCTTCGAATCGTACCTGATGATGTTCTTGTTTTTCTTGACGAGAAGGTTGACAAAGCAACACATGAGTTTGACAAACGTGCTCCTCCTCTGGCAAAGCAAGCCGTTCAGATTATGCAGCATTTTGCTGAAAAGGCTGCTCGAACTGGCCAAGAGCTCGTGAGCGAGTTTCAAACGGGTGGACCACGTTCAGCATTTCACTATGCAGCAAAGGAGTACAAGCAGTTGGTTCTAAACCAAGGAGTGAAGATTTGGGTGGGGCTCAACCGGCTTCCATCGTTCCACAAGGTGGCGGACATGGCGGTGCCATCGGCGGCTCAGTGGCTGGAGAAGTACAACAGCAAGGTGAAAGATATGAGGCAGAAGGGGTACTACGTGTTCGCCTATTTTCCTGAAGTTCCTGTGAGTGAGATAGCCAAGGCATTTAAGCAGGGAGAACCCAAGAGCAAGGAAGAGACACCAGCACCTACTTCTACACCTGCTCCTGCATCTACTACTGCACAAGCTCCACCGGAGCGTAAACCGGGATCAGACTCCGAATCGGAATCGGGTTCGGTTTCAGTTTCTGAATAG

Protein sequence

MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAYEKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQTGGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDSESESGSVSVSE

Homology

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BLAST of Sed0023952 vs. NCBI nr
Match: KAG7012732.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.7 bits (1005), Expect = 4.7e-105
Identity = 202/252 (80.16%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           MEN+SRNLELKHLGFVRIAVI TIACV+NLYDYAK+NSGPLRSAVE+VESAV+TVVAPAY
Sbjct: 44  MENDSRNLELKHLGFVRIAVIQTIACVTNLYDYAKQNSGPLRSAVENVESAVNTVVAPAY 103

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLR+ PDDVL+FLDEKVDKATHEFDK APPLAKQAVQI QHF +KAARTGQELV+EFQT
Sbjct: 104 EKLRVAPDDVLLFLDEKVDKATHEFDKSAPPLAKQAVQITQHFVQKAARTGQELVNEFQT 163

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AF YAAKEYKQLVLNQGVKIW GLNRLPSFHK A+ AVPSA QWLEKYN  VK+M
Sbjct: 164 GGPRAAFQYAAKEYKQLVLNQGVKIWAGLNRLPSFHKFAEKAVPSAEQWLEKYNCTVKEM 223

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTA-QAPPERKPGSD 240
           RQKGYYVFAY PEVPVSEIAKAFK+GE K+KEETP P   P P S  A   PPE K  S+
Sbjct: 224 RQKGYYVFAYLPEVPVSEIAKAFKEGEAKNKEETPPPPPPPPPTSEQAPPPPPENKVSSE 283

Query: 241 SESESGSVSVSE 252
           SE +SG+  V++
Sbjct: 284 SELDSGAQCVND 295

[Close]

BLAST of Sed0023952 vs. NCBI nr
Match: XP_023542339.1 (REF/SRPP-like protein At1g67360 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 6.1e-105
Identity = 201/246 (81.71%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           MEN+SRNLELKHLGFVRIAVI TIACV+NLYDYAK+NSGPLRSAVE+VESAV+TVVAPAY
Sbjct: 44  MENDSRNLELKHLGFVRIAVIQTIACVTNLYDYAKQNSGPLRSAVENVESAVNTVVAPAY 103

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRI PDDVL+FLDEKVDKATHEFDK APPLAKQAVQI QHF +KAARTGQELV+EFQT
Sbjct: 104 EKLRIAPDDVLLFLDEKVDKATHEFDKSAPPLAKQAVQITQHFVQKAARTGQELVNEFQT 163

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AF YAAKEYKQL+LNQGVKIW GLNR+PSFHK AD AVPSA QWLEKYN  VK+M
Sbjct: 164 GGPRAAFQYAAKEYKQLILNQGVKIWAGLNRVPSFHKFADKAVPSAEQWLEKYNCTVKEM 223

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDS 240
           RQKGYYVFAY PEVPVSEIAKAFK+GE K+KEETP P S P  +      PPE K GS+S
Sbjct: 224 RQKGYYVFAYLPEVPVSEIAKAFKEGEAKNKEETP-PPSPPPTSEQAPPPPPENKVGSES 283

Query: 241 ESESGS 247
           E +SGS
Sbjct: 284 ELDSGS 288

[Close]

BLAST of Sed0023952 vs. NCBI nr
Match: KAG6573641.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386.3 bits (991), Expect = 2.0e-103
Identity = 194/232 (83.62%), Postives = 208/232 (89.66%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           MEN+SRNLELKHLGFVRIAVI TIACV+NLYDYAK+NSGPLRSAVE+VESAV+TVVAPAY
Sbjct: 44  MENDSRNLELKHLGFVRIAVIQTIACVTNLYDYAKQNSGPLRSAVENVESAVNTVVAPAY 103

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLR+ PDDVL+FLDEKVDKATHEFDK APPLAKQAVQI QHF +KAARTGQELV+EFQT
Sbjct: 104 EKLRVAPDDVLLFLDEKVDKATHEFDKSAPPLAKQAVQITQHFVQKAARTGQELVNEFQT 163

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AF YAAKEYKQLVLNQGVKIW GLNRLPSFHK A+ AVPSA QWLEKYN  VK+M
Sbjct: 164 GGPRAAFQYAAKEYKQLVLNQGVKIWAGLNRLPSFHKFAEKAVPSAEQWLEKYNCTVKEM 223

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPP 233
           RQKGYYVFAY PEVPVSEIAKAFK+GE K+KEETP P   P P S  A  PP
Sbjct: 224 RQKGYYVFAYLPEVPVSEIAKAFKEGEAKNKEETPPPPPPPPPTSEQAPPPP 275

[Close]

BLAST of Sed0023952 vs. NCBI nr
Match: XP_038893091.1 (REF/SRPP-like protein At1g67360 [Benincasa hispida])

HSP 1 Score: 384.4 bits (986), Expect = 7.4e-103
Identity = 199/249 (79.92%), Postives = 219/249 (87.95%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           ME+ES+NLELKHLGFVRIAVI TI CV+NLYDYAK+NSGPLRSAVESVESAV+TVV PAY
Sbjct: 1   MESESQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRI PDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQI QHF +KAARTGQELV+EFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHFIQKAARTGQELVNEFQT 120

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AFHYA  EYKQLVL+Q VKIW GLNRLPSFHK ADMA+P+ AQWLE YN KVK+M
Sbjct: 121 GGPRAAFHYAGNEYKQLVLDQAVKIWAGLNRLPSFHKFADMALPTTAQWLESYNCKVKEM 180

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDS 240
           RQKGY+VF Y PEVPVS+IAKAFKQ E K KEETP PT       T+ QAPP+ +PGSDS
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQDEGKEKEETP-PT-------TSEQAPPKHEPGSDS 240

Query: 241 ESESGSVSV 250
           +S+S SV+V
Sbjct: 241 DSDSDSVAV 241

[Close]

BLAST of Sed0023952 vs. NCBI nr
Match: XP_022966929.1 (REF/SRPP-like protein At1g67360 [Cucurbita maxima])

HSP 1 Score: 382.5 bits (981), Expect = 2.8e-102
Identity = 198/246 (80.49%), Postives = 215/246 (87.40%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           ME++SRNLELKHLGFVRIAVI TIACV+NLYDYAK+NSGPLRSAVE+VESAV+TVVAPAY
Sbjct: 44  MEDDSRNLELKHLGFVRIAVIQTIACVTNLYDYAKQNSGPLRSAVENVESAVNTVVAPAY 103

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRI PDDVL+FLD+KVDKATHEFDK APPLAKQAVQI QH  +KAARTGQELV+EFQT
Sbjct: 104 EKLRIAPDDVLLFLDDKVDKATHEFDKSAPPLAKQAVQITQHLVQKAARTGQELVNEFQT 163

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AF YAAKEYKQLVLNQGVKIW GLNR+PSFHK+AD AVPS  QWLEKYN  VK+M
Sbjct: 164 GGPRAAFQYAAKEYKQLVLNQGVKIWAGLNRVPSFHKLADKAVPSVEQWLEKYNCTVKEM 223

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDS 240
           RQKGYYVFAY PEVPVSEIAKAFK+GE K+KE TP P   P P S  A AP E K  SDS
Sbjct: 224 RQKGYYVFAYLPEVPVSEIAKAFKEGEAKNKEGTPPP---PPPTSEQAPAPHENKVSSDS 283

Query: 241 ESESGS 247
           E +S S
Sbjct: 284 ELDSNS 286

[Close]

BLAST of Sed0023952 vs. ExPASy Swiss-Prot
Match: Q9FYF7 (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana OX=3702 GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.6e-52
Identity = 114/244 (46.72%), Postives = 149/244 (61.07%), Query Frame = 0


Query: 1   MENESRN---LELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVA 60
           ME E +N   + LKHL FVRIA IH +A VSNLY+YAK+NSGPL+SAVE VE AV TVV 
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSE 120
           P Y+K + VPD +LVFLD KV + +++FD+ APP+AK+ V        KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTGGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKV 180
            +TGGP++AF+YAA EYK  V+   VK+W  LN+    H + D A+P AA +  +YN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPG 240
            DM   GY +  Y P VPV +I KA+++ + + K+       T      T  A    K  
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKK----GGDTAGKKGETTDAADGDKSS 240

Query: 241 SDSE 242
           SDSE
Sbjct: 241 SDSE 240

[Close]

BLAST of Sed0023952 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-35
Identity = 87/220 (39.55%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 10  LKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAYEKLRIVPDD 69
           LK+L FV++A I+ I C S+LY+YAK+NSGPL+  V++VE  V TV+ P YEK   VP +
Sbjct: 20  LKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFE 79

Query: 70  VLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQ---------- 129
           +L+F+D KV+ + +E ++  P L K+A       A+KA      + SE Q          
Sbjct: 80  LLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKN 139

Query: 130 -TGGPRSAFHYAAKE----YKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYN 189
            T    S     AKE    Y+ +     V  W  LNRLP F +VA + VP+AA W EKYN
Sbjct: 140 ITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYN 199

Query: 190 SKVKDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEET 215
             V    ++GY V  Y P +P   IAK F+ G      ET
Sbjct: 200 QSVSYTAERGYTVALYLPLIPTERIAKVFQDGSALPTVET 239

[Close]

BLAST of Sed0023952 vs. ExPASy Swiss-Prot
Match: O82246 (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana OX=3702 GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.7e-30
Identity = 71/200 (35.50%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 8   LELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAYEKLRIVP 67
           ++LKHL F+++A ++  AC S LY+ AK N+GPL+  VE++E  V TV+AP YEK   VP
Sbjct: 39  MKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVP 98

Query: 68  DDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQTGGPRSAF 127
             +L+F+D KVD    + +   P L KQA       A +  RTG    ++      R  +
Sbjct: 99  FKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKY 158

Query: 128 HYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDMRQKGYYV 187
             AA+ Y          +W  LN+LP F +VA + +P+A  W EKYN  V+ +  + Y+ 
Sbjct: 159 EPAAEYY-------AATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFG 218

Query: 188 FAYFPEVPVSEIAKAFKQGE 208
             Y P +P+ +I+   +Q +
Sbjct: 219 AEYLPMIPIEKISDILEQDQ 231

[Close]

BLAST of Sed0023952 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 83/217 (38.25%), Postives = 115/217 (53.00%), Query Frame = 0


Query: 10  LKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAYEKLRIVPDD 69
           LK+L FV+ A +  +   + +Y  AK  SGPL+  VESVE AV TVV P YEK   VP +
Sbjct: 22  LKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVE 81

Query: 70  VLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQTGG------- 129
           VL ++D+KVD +  E D+R PP+ KQ        A+ A    + L SE +  G       
Sbjct: 82  VLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASG 141

Query: 130 ----PRSAFHYAAKE----YKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYN 189
                 S +  AAKE    Y+       V  W  LN+LP F ++A +AVP+AA   EKYN
Sbjct: 142 MAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYN 201

Query: 190 SKVKDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSK 212
             V    +KGY V +Y P VP   I+K F + + +++
Sbjct: 202 DTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETE 238

[Close]

BLAST of Sed0023952 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-25
Identity = 78/232 (33.62%), Postives = 115/232 (49.57%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           ME  +    L++L FV+ A    +   +  Y YAK+ +GPLR  V+ VE  V  VV P Y
Sbjct: 26  MEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVY 85

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           ++   VP D+L FLD KV ++  E D+R PP+ K+A  + +  A +  + G  LV    T
Sbjct: 86  DRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAG--LVGT-AT 145

Query: 121 GGPRSAFHYAA-------KEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKY 180
           G  +SA   A          Y+ +   +  + W  LNRLP    V    +P+AA    +Y
Sbjct: 146 GLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARY 205

Query: 181 NSKVKDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEET-PAPTSTPAPA 225
           N+ V D  ++G  V  Y P VP   +++ F  G P +   T PAP   P P+
Sbjct: 206 NTAVADGAKRGSAVATYLPLVPTERLSRVF--GYPLADAATSPAPEMQPIPS 252

[Close]

BLAST of Sed0023952 vs. ExPASy TrEMBL
Match: A0A6J1HV75 (REF/SRPP-like protein At1g67360 OS=Cucurbita maxima OX=3661 GN=LOC111466494 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.4e-102
Identity = 198/246 (80.49%), Postives = 215/246 (87.40%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           ME++SRNLELKHLGFVRIAVI TIACV+NLYDYAK+NSGPLRSAVE+VESAV+TVVAPAY
Sbjct: 44  MEDDSRNLELKHLGFVRIAVIQTIACVTNLYDYAKQNSGPLRSAVENVESAVNTVVAPAY 103

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRI PDDVL+FLD+KVDKATHEFDK APPLAKQAVQI QH  +KAARTGQELV+EFQT
Sbjct: 104 EKLRIAPDDVLLFLDDKVDKATHEFDKSAPPLAKQAVQITQHLVQKAARTGQELVNEFQT 163

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AF YAAKEYKQLVLNQGVKIW GLNR+PSFHK+AD AVPS  QWLEKYN  VK+M
Sbjct: 164 GGPRAAFQYAAKEYKQLVLNQGVKIWAGLNRVPSFHKLADKAVPSVEQWLEKYNCTVKEM 223

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDS 240
           RQKGYYVFAY PEVPVSEIAKAFK+GE K+KE TP P   P P S  A AP E K  SDS
Sbjct: 224 RQKGYYVFAYLPEVPVSEIAKAFKEGEAKNKEGTPPP---PPPTSEQAPAPHENKVSSDS 283

Query: 241 ESESGS 247
           E +S S
Sbjct: 284 ELDSNS 286

[Close]

BLAST of Sed0023952 vs. ExPASy TrEMBL
Match: A0A6J1DFU7 (REF/SRPP-like protein At1g67360 OS=Momordica charantia OX=3673 GN=LOC111019717 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.8e-102
Identity = 200/250 (80.00%), Postives = 214/250 (85.60%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           MENES+N ELKHLGFVRIA I TI CVSNLY YAK+NSG LRSAVESVESAV+TVV PAY
Sbjct: 1   MENESQNRELKHLGFVRIAAIQTIVCVSNLYAYAKQNSGTLRSAVESVESAVNTVVGPAY 60

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRIVPDDVLVFLD+KVDKATHEFDKRAPPLAKQAVQI QH  +KAART QELV+EFQ+
Sbjct: 61  EKLRIVPDDVLVFLDDKVDKATHEFDKRAPPLAKQAVQITQHIIQKAARTAQELVNEFQS 120

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AFHYAAKEYKQLV+NQGVK W GLNRLPSFHK ADMAVPSAAQWLE+YN KVKDM
Sbjct: 121 GGPRAAFHYAAKEYKQLVVNQGVKTWEGLNRLPSFHKFADMAVPSAAQWLERYNYKVKDM 180

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDS 240
           RQKGYYVF YFPEVPVSEIAKAF+QGE K +E  P P S         QAP E K  SDS
Sbjct: 181 RQKGYYVFDYFPEVPVSEIAKAFEQGEAKKEENPPPPAS--------EQAPTECKADSDS 240

Query: 241 ESESGSVSVS 251
           +S+SGS SVS
Sbjct: 241 DSDSGSDSVS 242

[Close]

BLAST of Sed0023952 vs. ExPASy TrEMBL
Match: A0A6J1G019 (REF/SRPP-like protein At1g67360 OS=Cucurbita moschata OX=3662 GN=LOC111449484 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.4e-101
Identity = 198/256 (77.34%), Postives = 219/256 (85.55%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           MEN+SRNLELKHLGFVRIAVI TIACV+NLYDYAK+NSGPLRSAVE+VESAV+TVVAPAY
Sbjct: 44  MENDSRNLELKHLGFVRIAVIQTIACVTNLYDYAKQNSGPLRSAVENVESAVNTVVAPAY 103

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRI PDDVL+FLDEKVDKAT+EFDK APPLAKQAVQI QH  +KAARTGQELV++FQT
Sbjct: 104 EKLRIAPDDVLLFLDEKVDKATYEFDKSAPPLAKQAVQITQHLVQKAARTGQELVNQFQT 163

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
            GPR+AF YAA+EYKQLVLNQGVKIW GLNR+PSFHK A+ AVPSA QWLEKYN  VK+M
Sbjct: 164 SGPRAAFQYAAQEYKQLVLNQGVKIWAGLNRVPSFHKFAEKAVPSAEQWLEKYNCTVKEM 223

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAP-------TSTPAPASTTAQA--- 240
           RQKGYYVFAY PEVPVSEIAKAFK+GE K+KEETP P        + P P  T+ QA   
Sbjct: 224 RQKGYYVFAYLPEVPVSEIAKAFKEGEAKNKEETPPPPPPPTSEQAPPPPPPTSEQAPPP 283

Query: 241 PPERKPGSDSESESGS 247
           PPE K  S+SE +SGS
Sbjct: 284 PPENKVSSESELDSGS 299

[Close]

BLAST of Sed0023952 vs. ExPASy TrEMBL
Match: A0A5D3CW84 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002240 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.4e-101
Identity = 196/250 (78.40%), Postives = 219/250 (87.60%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           ME+ES+NLELKHLGFVRIA+I TI CV+NLYDYAK+NSGPLRSAVESVESAV+TVV PAY
Sbjct: 1   MESESQNLELKHLGFVRIALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRI PDDVLVFLD KVDKATHEFDKRAPPLAKQA QI QHF +KAARTG+ELV+EFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGKELVNEFQT 120

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AFHYAA EYKQLVL+QGVK+W GLNRLPSFHK ADMAVP+AAQWLE YNSKVK++
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKMWAGLNRLPSFHKFADMAVPTAAQWLESYNSKVKEL 180

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDS 240
           RQKGY+VF Y PEVPVS+IAKAFKQGE K KEET +PT       T  QAP + + GSDS
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQGEAKEKEET-SPT-------TPEQAPSKNEAGSDS 240

Query: 241 ESESGSVSVS 251
           +S+S S SV+
Sbjct: 241 DSDSDSASVA 242

[Close]

BLAST of Sed0023952 vs. ExPASy TrEMBL
Match: A0A1S3BEY9 (REF/SRPP-like protein At1g67360 OS=Cucumis melo OX=3656 GN=LOC103488889 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.4e-101
Identity = 196/250 (78.40%), Postives = 219/250 (87.60%), Query Frame = 0


Query: 1   MENESRNLELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAY 60
           ME+ES+NLELKHLGFVRIA+I TI CV+NLYDYAK+NSGPLRSAVESVESAV+TVV PAY
Sbjct: 1   MESESQNLELKHLGFVRIALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQT 120
           EKLRI PDDVLVFLD KVDKATHEFDKRAPPLAKQA QI QHF +KAARTG+ELV+EFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGKELVNEFQT 120

Query: 121 GGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDM 180
           GGPR+AFHYAA EYKQLVL+QGVK+W GLNRLPSFHK ADMAVP+AAQWLE YNSKVK++
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKMWAGLNRLPSFHKFADMAVPTAAQWLESYNSKVKEL 180

Query: 181 RQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPGSDS 240
           RQKGY+VF Y PEVPVS+IAKAFKQGE K KEET +PT       T  QAP + + GSDS
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQGEAKEKEET-SPT-------TPEQAPSKNEAGSDS 240

Query: 241 ESESGSVSVS 251
           +S+S S SV+
Sbjct: 241 DSDSDSASVA 242

[Close]

BLAST of Sed0023952 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 206.5 bits (524), Expect = 2.6e-53
Identity = 114/244 (46.72%), Postives = 149/244 (61.07%), Query Frame = 0


Query: 1   MENESRN---LELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVA 60
           ME E +N   + LKHL FVRIA IH +A VSNLY+YAK+NSGPL+SAVE VE AV TVV 
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSE 120
           P Y+K + VPD +LVFLD KV + +++FD+ APP+AK+ V        KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTGGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKV 180
            +TGGP++AF+YAA EYK  V+   VK+W  LN+    H + D A+P AA +  +YN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPG 240
            DM   GY +  Y P VPV +I KA+++ + + K+       T      T  A    K  
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKK----GGDTAGKKGETTDAADGDKSS 240

Query: 241 SDSE 242
           SDSE
Sbjct: 241 SDSE 240

[Close]

BLAST of Sed0023952 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 206.5 bits (524), Expect = 2.6e-53
Identity = 114/244 (46.72%), Postives = 149/244 (61.07%), Query Frame = 0


Query: 1   MENESRN---LELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVA 60
           ME E +N   + LKHL FVRIA IH +A VSNLY+YAK+NSGPL+SAVE VE AV TVV 
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIVPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSE 120
           P Y+K + VPD +LVFLD KV + +++FD+ APP+AK+ V        KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTGGPRSAFHYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKV 180
            +TGGP++AF+YAA EYK  V+   VK+W  LN+    H + D A+P AA +  +YN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSKEETPAPTSTPAPASTTAQAPPERKPG 240
            DM   GY +  Y P VPV +I KA+++ + + K+       T      T  A    K  
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKK----GGDTAGKKGETTDAADGDKSS 240

Query: 241 SDSE 242
           SDSE
Sbjct: 241 SDSE 240

[Close]

BLAST of Sed0023952 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 132.1 bits (331), Expect = 6.2e-31
Identity = 71/200 (35.50%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 8   LELKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAYEKLRIVP 67
           ++LKHL F+++A ++  AC S LY+ AK N+GPL+  VE++E  V TV+AP YEK   VP
Sbjct: 39  MKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVP 98

Query: 68  DDVLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQTGGPRSAF 127
             +L+F+D KVD    + +   P L KQA       A +  RTG    ++      R  +
Sbjct: 99  FKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKY 158

Query: 128 HYAAKEYKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYNSKVKDMRQKGYYV 187
             AA+ Y          +W  LN+LP F +VA + +P+A  W EKYN  V+ +  + Y+ 
Sbjct: 159 EPAAEYY-------AATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFG 218

Query: 188 FAYFPEVPVSEIAKAFKQGE 208
             Y P +P+ +I+   +Q +
Sbjct: 219 AEYLPMIPIEKISDILEQDQ 231

[Close]

BLAST of Sed0023952 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 131.7 bits (330), Expect = 8.1e-31
Identity = 83/217 (38.25%), Postives = 115/217 (53.00%), Query Frame = 0


Query: 10  LKHLGFVRIAVIHTIACVSNLYDYAKKNSGPLRSAVESVESAVDTVVAPAYEKLRIVPDD 69
           LK+L FV+ A +  +   + +Y  AK  SGPL+  VESVE AV TVV P YEK   VP +
Sbjct: 22  LKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVE 81

Query: 70  VLVFLDEKVDKATHEFDKRAPPLAKQAVQIMQHFAEKAARTGQELVSEFQTGG------- 129
           VL ++D+KVD +  E D+R PP+ KQ        A+ A    + L SE +  G       
Sbjct: 82  VLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASG 141

Query: 130 ----PRSAFHYAAKE----YKQLVLNQGVKIWVGLNRLPSFHKVADMAVPSAAQWLEKYN 189
                 S +  AAKE    Y+       V  W  LN+LP F ++A +AVP+AA   EKYN
Sbjct: 142 MAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYN 201

Query: 190 SKVKDMRQKGYYVFAYFPEVPVSEIAKAFKQGEPKSK 212
             V    +KGY V +Y P VP   I+K F + + +++
Sbjct: 202 DTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETE 238

The following BLAST results are available for this feature:

BLAST of Sed0023952 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012732.1	4.7e-105	80.16	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023542339.1	6.1e-105	81.71	REF/SRPP-like protein At1g67360 [Cucurbita pepo subsp. pepo]	[more]
KAG6573641.1	2.0e-103	83.62	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038893091.1	7.4e-103	79.92	REF/SRPP-like protein At1g67360 [Benincasa hispida]	[more]
XP_022966929.1	2.8e-102	80.49	REF/SRPP-like protein At1g67360 [Cucurbita maxima]	[more]

BLAST of Sed0023952 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF7	3.6e-52	46.72	REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana OX=3702 GN=At1g67360 PE=...	[more]
Q9SW70	2.4e-35	39.55	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
O82246	8.7e-30	35.50	REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana OX=3702 GN=At2g47780 PE=...	[more]
Q9MA63	1.1e-29	38.25	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
Q9FRA7	4.9e-25	33.62	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]

BLAST of Sed0023952 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HV75	1.4e-102	80.49	REF/SRPP-like protein At1g67360 OS=Cucurbita maxima OX=3661 GN=LOC111466494 PE=3...	[more]
A0A6J1DFU7	6.8e-102	80.00	REF/SRPP-like protein At1g67360 OS=Momordica charantia OX=3673 GN=LOC111019717 P...	[more]
A0A6J1G019	3.4e-101	77.34	REF/SRPP-like protein At1g67360 OS=Cucurbita moschata OX=3662 GN=LOC111449484 PE...	[more]
A0A5D3CW84	4.4e-101	78.40	REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35...	[more]
A0A1S3BEY9	4.4e-101	78.40	REF/SRPP-like protein At1g67360 OS=Cucumis melo OX=3656 GN=LOC103488889 PE=3 SV=...	[more]

BLAST of Sed0023952 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67360.2	2.6e-53	46.72	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	2.6e-53	46.72	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	6.2e-31	35.50	Rubber elongation factor protein (REF)	[more]
AT3G05500.1	8.1e-31	38.25	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 6..205 e-value: 3.5E-75 score: 252.3
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 1..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..251
None	No IPR available	PANTHER	PTHR33732:SF2	RUBBER ELONGATION FACTOR PROTEIN	coord: 1..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023952.1	Sed0023952.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0009555	pollen development
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet