Sed0023832 (gene) Chayote v1

Overview


Name	Sed0023832
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like
Location	LG13: 20164939 .. 20165919 (+)
RNA-Seq Expression	Sed0023832
Synteny	Sed0023832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAACCAAAAAAAAAAAAAAAAAAATTAAAAACCCATTTCCCCCTTTTTCCCTTTTTCCATTTTTCCATTTTTCATAAAAACAAAACAATCCCGTGATTCAAAATAAATAAAATCCCCTCCCATGATTTCGCCCAAACCCCCAATTAAAATCTCTTCTCAATTGATGGAAGAATCCGGCGGCGGCTCGTCGGAGCCGGCGGCGGAGGGGTCGTCGGCGCCGCCTTCAGGGCCGCCGAGCCGGTACGAATCGCAGAAGAGGAGGGATTGGAACACGTTTTTGCAGTACTTGAAAAACCACAAGCCGCCGTTGTCGTTGGCGCGGTGCAGCGGCGCTCACGTGATCGAATTCCTGAAGTATTTGGACCAGTTCGGGAAGACCAAGGTTCACTGGTCGGGTTGCCCGTATTTCGGGCACCCGAACCCGCCTGCCCCCTGCCCCTGCCCGCTCAAACAGGCTTGGGGCAGCTTGGACGCGCTGATCGGCCGGCTTAGAGCCGCCTACGAGGAGAACGGCGGCCGGCCGGAATCGAACCCGTTTGCTGCACGCGCCGTCAGGATTTATCTCCGGGAAGTGAGAGAAGCTCAGGCGAAAGCCAGAGGGATTCCTTATGAGAAAAAGAAACGGAAAAGACATACCCCCGCCGCCGCATCCGCCTCCACCGCCGTAACCGCCGCCAATGTGTTGGTGGCTCCGGTGGGTGATGTGAGTACTAGCTCTGCCGCCGCCGGTGGAGATGATCAGCCCGAAACAACCGCTGGTGGTGATCATAGTGATGGTGCTCCGCCGTCGTCTACCGCCGCCGTATAGTCTCTCTTCTGTTTATTTTTGTCTCAATTTCTTTTTCTTTTTTACATTTTGCTTTAATTGGCATTATCTCATCATCATCTCTTCTAATTGTGATTATGAGGTTGATTTAATCTTATAATATTCGACTATTCACATTAATTTGATGATTGATCTTCATTTTTAACCAACCAAA

mRNA sequence

CCAACCAAAAAAAAAAAAAAAAAAATTAAAAACCCATTTCCCCCTTTTTCCCTTTTTCCATTTTTCCATTTTTCATAAAAACAAAACAATCCCGTGATTCAAAATAAATAAAATCCCCTCCCATGATTTCGCCCAAACCCCCAATTAAAATCTCTTCTCAATTGATGGAAGAATCCGGCGGCGGCTCGTCGGAGCCGGCGGCGGAGGGGTCGTCGGCGCCGCCTTCAGGGCCGCCGAGCCGGTACGAATCGCAGAAGAGGAGGGATTGGAACACGTTTTTGCAGTACTTGAAAAACCACAAGCCGCCGTTGTCGTTGGCGCGGTGCAGCGGCGCTCACGTGATCGAATTCCTGAAGTATTTGGACCAGTTCGGGAAGACCAAGGTTCACTGGTCGGGTTGCCCGTATTTCGGGCACCCGAACCCGCCTGCCCCCTGCCCCTGCCCGCTCAAACAGGCTTGGGGCAGCTTGGACGCGCTGATCGGCCGGCTTAGAGCCGCCTACGAGGAGAACGGCGGCCGGCCGGAATCGAACCCGTTTGCTGCACGCGCCGTCAGGATTTATCTCCGGGAAGTGAGAGAAGCTCAGGCGAAAGCCAGAGGGATTCCTTATGAGAAAAAGAAACGGAAAAGACATACCCCCGCCGCCGCATCCGCCTCCACCGCCGTAACCGCCGCCAATGTGTTGGTGGCTCCGGTGGGTGATGTGAGTACTAGCTCTGCCGCCGCCGGTGGAGATGATCAGCCCGAAACAACCGCTGGTGGTGATCATAGTGATGGTGCTCCGCCGTCGTCTACCGCCGCCGTATAGTCTCTCTTCTGTTTATTTTTGTCTCAATTTCTTTTTCTTTTTTACATTTTGCTTTAATTGGCATTATCTCATCATCATCTCTTCTAATTGTGATTATGAGGTTGATTTAATCTTATAATATTCGACTATTCACATTAATTTGATGATTGATCTTCATTTTTAACCAACCAAA

Coding sequence (CDS)

ATGATTTCGCCCAAACCCCCAATTAAAATCTCTTCTCAATTGATGGAAGAATCCGGCGGCGGCTCGTCGGAGCCGGCGGCGGAGGGGTCGTCGGCGCCGCCTTCAGGGCCGCCGAGCCGGTACGAATCGCAGAAGAGGAGGGATTGGAACACGTTTTTGCAGTACTTGAAAAACCACAAGCCGCCGTTGTCGTTGGCGCGGTGCAGCGGCGCTCACGTGATCGAATTCCTGAAGTATTTGGACCAGTTCGGGAAGACCAAGGTTCACTGGTCGGGTTGCCCGTATTTCGGGCACCCGAACCCGCCTGCCCCCTGCCCCTGCCCGCTCAAACAGGCTTGGGGCAGCTTGGACGCGCTGATCGGCCGGCTTAGAGCCGCCTACGAGGAGAACGGCGGCCGGCCGGAATCGAACCCGTTTGCTGCACGCGCCGTCAGGATTTATCTCCGGGAAGTGAGAGAAGCTCAGGCGAAAGCCAGAGGGATTCCTTATGAGAAAAAGAAACGGAAAAGACATACCCCCGCCGCCGCATCCGCCTCCACCGCCGTAACCGCCGCCAATGTGTTGGTGGCTCCGGTGGGTGATGTGAGTACTAGCTCTGCCGCCGCCGGTGGAGATGATCAGCCCGAAACAACCGCTGGTGGTGATCATAGTGATGGTGCTCCGCCGTCGTCTACCGCCGCCGTATAG

Protein sequence

MISPKPPIKISSQLMEESGGGSSEPAAEGSSAPPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLVAPVGDVSTSSAAAGGDDQPETTAGGDHSDGAPPSSTAAV

Homology

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BLAST of Sed0023832 vs. NCBI nr
Match: XP_022998564.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima])

HSP 1 Score: 326.2 bits (835), Expect = 2.2e-85
Identity = 176/221 (79.64%), Postives = 179/221 (81.00%), Query Frame = 0


Query: 16  EESGGGSSEPAAEGSSAPPS-----GPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 75
           E  GGGSSEP  EGSSA  S      PPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG
Sbjct: 6   ESGGGGSSEPTGEGSSAGGSAPLAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 65

Query: 76  AHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 135
           AHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 66  AHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 125

Query: 136 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLVA 195
           GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR             A NV V 
Sbjct: 126 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR------------AATNVSVP 185

Query: 196 PVGDV----STSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           P  DV    S+SSA  GGD QPETTA GD +  APPS+TAA
Sbjct: 186 PPTDVSLAGSSSSATVGGDIQPETTASGDQTGDAPPSTTAA 214

[Close]

BLAST of Sed0023832 vs. NCBI nr
Match: KAG6607334.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037010.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.5 bits (833), Expect = 3.7e-85
Identity = 177/225 (78.67%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 16  EESGGGSSEPAAEGSSAPPS---------GPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 75
           E  GGGSSEP  EGSSA  S          PPSRYESQKRRDWNTFLQYLKNHKPPLSLA
Sbjct: 6   ESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 65

Query: 76  RCSGAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 135
           RCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA
Sbjct: 66  RCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 125

Query: 136 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAAN 195
           YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR             AAN
Sbjct: 126 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR------------AAAN 185

Query: 196 VLVAPVGDV----STSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           V V P  DV    S+SSA AG D QPETTA GD +  APPS+TAA
Sbjct: 186 VSVPPPTDVSLAGSSSSATAGADIQPETTAAGDQTGDAPPSTTAA 218

[Close]

BLAST of Sed0023832 vs. NCBI nr
Match: XP_022949557.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_022949558.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-84
Identity = 176/225 (78.22%), Postives = 179/225 (79.56%), Query Frame = 0


Query: 16  EESGGGSSEPAAEGSSAPPS---------GPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 75
           E  GGGSSEP  EGSSA  S          PPSRYESQKRRDWNTFLQYLKNHKPPLSLA
Sbjct: 6   ESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 65

Query: 76  RCSGAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 135
           RCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA
Sbjct: 66  RCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 125

Query: 136 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAAN 195
           YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR             AAN
Sbjct: 126 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR------------AAAN 185

Query: 196 VLVAPVGDV----STSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           V V P  DV    S+SSA  G D QPETTA GD +  APPS+TAA
Sbjct: 186 VSVPPPTDVSLAGSSSSATVGADIQPETTAAGDQTGDAPPSTTAA 218

[Close]

BLAST of Sed0023832 vs. NCBI nr
Match: XP_023523174.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-84
Identity = 175/225 (77.78%), Postives = 179/225 (79.56%), Query Frame = 0


Query: 16  EESGGGSSEPAAEGSS---------APPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 75
           E  GGGSSEP  EGSS         A  + PPSRYESQKRRDWNTFLQYLKNHKPPLSLA
Sbjct: 6   ESGGGGSSEPTGEGSSAGGTAPLAAAGAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 65

Query: 76  RCSGAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 135
           RCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA
Sbjct: 66  RCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 125

Query: 136 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAAN 195
           YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR             AAN
Sbjct: 126 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR------------AAAN 185

Query: 196 VLVAPVGDV----STSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           V V P  DV    S+SSA  G D QPETTA GD +  APPS+TAA
Sbjct: 186 VSVPPPTDVSLAGSSSSATVGADIQPETTAAGDQTGDAPPSTTAA 218

[Close]

BLAST of Sed0023832 vs. NCBI nr
Match: XP_023520079.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-79
Identity = 164/217 (75.58%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 15  MEESGGGSSEPAAEGSSA----PPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 74
           + + GGGSSE ++ G+SA    P   P SRYESQKRRDWNTFLQYLKNHKPPL LARCSG
Sbjct: 4   VSKPGGGSSEGSSAGASAAATTPAPAPSSRYESQKRRDWNTFLQYLKNHKPPLGLARCSG 63

Query: 75  AHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 134
           AHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 64  AHVIEFLKYLDQFGKTKVHASGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 123

Query: 135 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLVA 194
           GGRPESNPFAARAVRI+LREVREAQAKARGIPYEKKKRKRH  +A++++ A TAA + V 
Sbjct: 124 GGRPESNPFAARAVRIFLREVREAQAKARGIPYEKKKRKRHAASASASAPAPTAAILSVP 183

Query: 195 PVGDVSTSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           P     T    AG D QPET+   D S   PPS+TAA
Sbjct: 184 P----ETHVVFAGEDHQPETS---DPSGAPPPSTTAA 213

[Close]

BLAST of Sed0023832 vs. ExPASy Swiss-Prot
Match: A2Y3I2 (Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.1e-71
Identity = 142/213 (66.67%), Postives = 158/213 (74.18%), Query Frame = 0


Query: 12  SQLMEESGGGSSEPAAEGSSAPPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGA 71
           SQ  ++      +P A+   AP +   SRYESQKRRDWNTFLQYL+NHKPPL+L RCSGA
Sbjct: 41  SQAQQQVQEAQPQPLAQ--QAPAAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGA 100

Query: 72  HVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENG 131
           HVIEFLKYLDQFGKTKVH  GC YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+G
Sbjct: 101 HVIEFLKYLDQFGKTKVHADGCAYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESG 160

Query: 132 GRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLVAP 191
           GRPESNPFAARAVRIYLREVREAQAKARGIPYEKK+++    AAA+    V    V+ AP
Sbjct: 161 GRPESNPFAARAVRIYLREVREAQAKARGIPYEKKRKRGAAAAAAAPPVVVAPPPVVTAP 220

Query: 192 VGDVSTSSAAAGGDDQPETTAGGDHSDGAPPSS 225
                TS  A   DD  E T  G+  D  P +S
Sbjct: 221 DDATGTSGGAGEDDDDDEATHSGEQQDTTPAAS 251

[Close]

BLAST of Sed0023832 vs. ExPASy Swiss-Prot
Match: Q5W659 (Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.1e-71
Identity = 142/213 (66.67%), Postives = 158/213 (74.18%), Query Frame = 0


Query: 12  SQLMEESGGGSSEPAAEGSSAPPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGA 71
           SQ  ++      +P A+   AP +   SRYESQKRRDWNTFLQYL+NHKPPL+L RCSGA
Sbjct: 41  SQAQQQVQEAQPQPLAQ--QAPAAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGA 100

Query: 72  HVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENG 131
           HVIEFLKYLDQFGKTKVH  GC YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+G
Sbjct: 101 HVIEFLKYLDQFGKTKVHADGCAYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESG 160

Query: 132 GRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLVAP 191
           GRPESNPFAARAVRIYLREVREAQAKARGIPYEKK+++    AAA+    V    V+ AP
Sbjct: 161 GRPESNPFAARAVRIYLREVREAQAKARGIPYEKKRKRGAAAAAAAPPVVVAPPPVVTAP 220

Query: 192 VGDVSTSSAAAGGDDQPETTAGGDHSDGAPPSS 225
                TS  A   DD  E T  G+  D  P +S
Sbjct: 221 DDATGTSGGAGEDDDDDEATHSGEQQDTTPAAS 251

[Close]

BLAST of Sed0023832 vs. ExPASy Swiss-Prot
Match: Q6ATW6 (Protein G1-like8 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L8 PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.6e-70
Identity = 152/234 (64.96%), Postives = 171/234 (73.08%), Query Frame = 0


Query: 15  MEESGGGSSEPAAEGSSAPPSGPP----SRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 74
           ME  GGG+   A   + APP+  P    SRYESQKRRDWNTFLQYLKNH+PPL+LARCSG
Sbjct: 1   MEGGGGGADGQAQPVAQAPPAMQPMQQLSRYESQKRRDWNTFLQYLKNHRPPLTLARCSG 60

Query: 75  AHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 134
           AHVIEFLKYLDQFGKTKVH SGC Y+G P+PPAPCPCPL+QAWGSLDALIGRLRAAYEE+
Sbjct: 61  AHVIEFLKYLDQFGKTKVHASGCAYYGQPSPPAPCPCPLRQAWGSLDALIGRLRAAYEES 120

Query: 135 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---------------HTPAA 194
           G  PESNPFAARAVRIYLREVR+AQAKARGIPYEKKKRKR               H P A
Sbjct: 121 GHAPESNPFAARAVRIYLREVRDAQAKARGIPYEKKKRKRTQQQQPPPPPPPPPQHQPGA 180

Query: 195 AS--ASTAVTAANVLVAPVGDVSTSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           A+  AS++ +AA   VA  G  S+++AAA      +T  GG  S     +S AA
Sbjct: 181 AAGEASSSSSAAAAAVAAEGSGSSAAAAAA---TSQTGGGGGGSTTTTTASAAA 231

[Close]

BLAST of Sed0023832 vs. ExPASy Swiss-Prot
Match: Q9LMK2 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.6e-70
Identity = 129/161 (80.12%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 15  MEESGGGSSEPAAEGSSAP-----PSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCS 74
           ME +  G S+P       P     P   PSRYESQKRRDWNTFLQYLKNHKPPL+L+RCS
Sbjct: 1   MESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCS 60

Query: 75  GAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE 134
           GAHVIEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEE
Sbjct: 61  GAHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEE 120

Query: 135 NGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR 171
           NGGRP+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKR
Sbjct: 121 NGGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKR 161

[Close]

BLAST of Sed0023832 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68
Identity = 144/217 (66.36%), Postives = 164/217 (75.58%), Query Frame = 0


Query: 15  MEESGGGSSEPAAEGSSAPPSGPP-----SRYESQKRRDWNTFLQYLKNHKPPLSLARCS 74
           M+ SG G S  AA G+ A  + P      SRYESQKRRDWNTFLQYL+NH+PPL+LARCS
Sbjct: 1   MDPSGPGPSSAAAGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCS 60

Query: 75  GAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE 134
           GAHVIEFL+YLDQFGKTKVH SGC ++G P+PP PCPCPL+QAWGSLDALIGRLRAAYEE
Sbjct: 61  GAHVIEFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEE 120

Query: 135 NGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLV 194
           +GG PESNPFAARAVRIYLREVR++QAKARGIPYEKKKRKR   A  +           V
Sbjct: 121 SGGTPESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQAAQPAG----------V 180

Query: 195 APVGDVSTSSAAAGGDDQPETTAGGDHSDGAPPSSTA 227
            P G  S ++AAAGG D   T +GG    GA  ++TA
Sbjct: 181 EPSGSSSAAAAAAGGGD---TGSGG----GAAATTTA 200

[Close]

BLAST of Sed0023832 vs. ExPASy TrEMBL
Match: A0A6J1KEN4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493161 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85
Identity = 176/221 (79.64%), Postives = 179/221 (81.00%), Query Frame = 0


Query: 16  EESGGGSSEPAAEGSSAPPS-----GPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 75
           E  GGGSSEP  EGSSA  S      PPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG
Sbjct: 6   ESGGGGSSEPTGEGSSAGGSAPLAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 65

Query: 76  AHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 135
           AHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 66  AHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 125

Query: 136 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLVA 195
           GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR             A NV V 
Sbjct: 126 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR------------AATNVSVP 185

Query: 196 PVGDV----STSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           P  DV    S+SSA  GGD QPETTA GD +  APPS+TAA
Sbjct: 186 PPTDVSLAGSSSSATVGGDIQPETTASGDQTGDAPPSTTAA 214

[Close]

BLAST of Sed0023832 vs. ExPASy TrEMBL
Match: A0A6J1GCE7 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111452872 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.2e-85
Identity = 176/225 (78.22%), Postives = 179/225 (79.56%), Query Frame = 0


Query: 16  EESGGGSSEPAAEGSSAPPS---------GPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 75
           E  GGGSSEP  EGSSA  S          PPSRYESQKRRDWNTFLQYLKNHKPPLSLA
Sbjct: 6   ESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 65

Query: 76  RCSGAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 135
           RCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA
Sbjct: 66  RCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 125

Query: 136 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAAN 195
           YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR             AAN
Sbjct: 126 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR------------AAAN 185

Query: 196 VLVAPVGDV----STSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           V V P  DV    S+SSA  G D QPETTA GD +  APPS+TAA
Sbjct: 186 VSVPPPTDVSLAGSSSSATVGADIQPETTAAGDQTGDAPPSTTAA 218

[Close]

BLAST of Sed0023832 vs. ExPASy TrEMBL
Match: A0A6J1HK49 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464848 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.7e-80
Identity = 164/217 (75.58%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 15  MEESGGGSSEPAAEGSSA----PPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 74
           + + GGG SE ++ G+SA    P   P SRYESQKRRDWNTFLQYLKNHKPPLSLARCSG
Sbjct: 13  VSKPGGGPSEGSSAGASAAATTPAPAPASRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 72

Query: 75  AHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 134
           AHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 73  AHVIEFLKYLDQFGKTKVHASGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 132

Query: 135 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAANVLVA 194
           GGRPESNPFAARAVRI+LREVREAQAKARGIPYEKKKRKRH  +A++++ A TAA + V 
Sbjct: 133 GGRPESNPFAARAVRIFLREVREAQAKARGIPYEKKKRKRHAASASASAPAPTAAILSVP 192

Query: 195 PVGDVSTSSAAAGGDDQPETTAGGDHSDGAPPSSTAA 228
           P     T    AG D QPET+   D S   PPS+TAA
Sbjct: 193 P----ETHVVLAGEDHQPETS---DPSGAPPPSTTAA 222

[Close]

BLAST of Sed0023832 vs. ExPASy TrEMBL
Match: A0A5A7UVV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00670 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.6e-79
Identity = 166/224 (74.11%), Postives = 173/224 (77.23%), Query Frame = 0


Query: 16  EESGGGSSEPAAEG-SSAPPSG--------PPSRYESQKRRDWNTFLQYLKNHKPPLSLA 75
           E  GGG+SE   EG SSA  +G        PPSRYESQKRRDWNTFLQYLKNHKPPL LA
Sbjct: 6   ESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLA 65

Query: 76  RCSGAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 135
           RCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA
Sbjct: 66  RCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 125

Query: 136 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAAN 195
           YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR  P A    T+     
Sbjct: 126 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPETS----- 185

Query: 196 VLVAPVGDVSTSSAAAGGDDQPETTAGGDHSDGA---PPSSTAA 228
                    ST++    GD+QPETTAGG   D A   PPS+TAA
Sbjct: 186 --------TSTTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAA 216

[Close]

BLAST of Sed0023832 vs. ExPASy TrEMBL
Match: A0A1S3C5Y5 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC103497051 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.6e-79
Identity = 166/224 (74.11%), Postives = 173/224 (77.23%), Query Frame = 0


Query: 16  EESGGGSSEPAAEG-SSAPPSG--------PPSRYESQKRRDWNTFLQYLKNHKPPLSLA 75
           E  GGG+SE   EG SSA  +G        PPSRYESQKRRDWNTFLQYLKNHKPPL LA
Sbjct: 6   ESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLA 65

Query: 76  RCSGAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 135
           RCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA
Sbjct: 66  RCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 125

Query: 136 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAAN 195
           YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR  P A    T+     
Sbjct: 126 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPETS----- 185

Query: 196 VLVAPVGDVSTSSAAAGGDDQPETTAGGDHSDGA---PPSSTAA 228
                    ST++    GD+QPETTAGG   D A   PPS+TAA
Sbjct: 186 --------TSTTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAA 216

[Close]

BLAST of Sed0023832 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 265.8 bits (678), Expect = 3.3e-71
Identity = 129/161 (80.12%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 15  MEESGGGSSEPAAEGSSAP-----PSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCS 74
           ME +  G S+P       P     P   PSRYESQKRRDWNTFLQYLKNHKPPL+L+RCS
Sbjct: 1   MESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCS 60

Query: 75  GAHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE 134
           GAHVIEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEE
Sbjct: 61  GAHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEE 120

Query: 135 NGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR 171
           NGGRP+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKR
Sbjct: 121 NGGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKR 161

[Close]

BLAST of Sed0023832 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 254.6 bits (649), Expect = 7.5e-68
Identity = 120/176 (68.18%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 11  SSQLMEESGGGSSEPAAEGSSAPPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 70
           SS +   +GG +++P +  SS+ PS   SRYE+QKRRDWNTF QYL+NH+PPLSL+RCSG
Sbjct: 27  SSSVTGATGGEATQPLS--SSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSG 86

Query: 71  AHVIEFLKYLDQFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 130
           AHV+EFL+YLDQFGKTKVH + C ++GHPNPPAPCPCPL+QAWGSLDALIGRLRAA+EEN
Sbjct: 87  AHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEEN 146

Query: 131 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAAN 187
           GG+PE+NPF ARAVR+YLREVR+ Q+KARG+ YEKKKRKR  P+++++S++  A++
Sbjct: 147 GGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPSSSTSSSSAVASH 200

[Close]

BLAST of Sed0023832 vs. TAIR 10
Match: AT5G58500.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 245.7 bits (626), Expect = 3.5e-65
Identity = 119/151 (78.81%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 27  AEGSSAPPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKT 86
           A  ++A  S  PSRYESQKRRDWNTFLQYL+NHKPPL+L+RCSGAHV+EFLKYLDQFGKT
Sbjct: 6   AAKAAASSSSSPSRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKT 65

Query: 87  KVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE-NGGRPESNPFAARAVR 146
           KVH + CP+FG PNPP+ C CPLKQAWGSLDALIGRLRAA+EE  GG PESNPFAA+AVR
Sbjct: 66  KVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVR 125

Query: 147 IYLREVREAQAKARGIPYEKKKRKR-HTPAA 176
           IYL+EVR+ QAKARGIPY+KKKRKR HT  A
Sbjct: 126 IYLKEVRQTQAKARGIPYDKKKRKRPHTDTA 156

[Close]

BLAST of Sed0023832 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-64
Identity = 116/164 (70.73%), Postives = 137/164 (83.54%), Query Frame = 0


Query: 22  SSEPAAEGSSAPPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLD 81
           +S  ++  S    +   SRYE+QKRRDWNTF QYL+NH+PPLSL+RCSGAHV+EFL+YLD
Sbjct: 30  TSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLD 89

Query: 82  QFGKTKVHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAA 141
           QFGKTKVH   CP+FGHPNPPAPC CPL+QAWGSLDALIGRLRAA+EENGG PE+NPF A
Sbjct: 90  QFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGA 149

Query: 142 RAVRIYLREVREAQAKARGIPYEKKKRKRHTPAAASASTAVTAA 186
           RAVR+YLREVR++QAKARGI YEKKKRKR  P    A  A++++
Sbjct: 150 RAVRLYLREVRDSQAKARGISYEKKKRKRPPPPLPPAQPAISSS 193

[Close]

BLAST of Sed0023832 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 232.3 bits (591), Expect = 4.0e-61
Identity = 106/146 (72.60%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 28  EGSSAPPSGPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTK 87
           E S + P   PSRYESQKRRDWNTF QYLKN +PP+ ++ CS  HV++FL+YLDQFGKTK
Sbjct: 13  ESSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 72

Query: 88  VHWSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIY 147
           VH  GC ++G P PPAPC CPL+QAWGSLDALIGRLRAAYEENGG PE+NPFA+ A+R+Y
Sbjct: 73  VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 132

Query: 148 LREVREAQAKARGIPYEKKKRKRHTP 174
           LREVRE QAKARGIPY+KKK+K+ TP
Sbjct: 133 LREVRECQAKARGIPYKKKKKKKPTP 158

The following BLAST results are available for this feature:

BLAST of Sed0023832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998564.1	2.2e-85	79.64	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima]	[more]
KAG6607334.1	3.7e-85	78.67	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subs...	[more]
XP_022949557.1	1.1e-84	78.22	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_0229495...	[more]
XP_023523174.1	1.8e-84	77.78	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_023520079.1	1.8e-79	75.58	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0023832 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Y3I2	4.1e-71	66.67	Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1	[more]
Q5W659	4.1e-71	66.67	Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1	[more]
Q6ATW6	4.6e-70	64.96	Protein G1-like8 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L8 PE=1 SV=1	[more]
Q9LMK2	4.6e-70	80.12	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XED8	1.1e-68	66.36	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]

BLAST of Sed0023832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEN4	1.1e-85	79.64	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GCE7	5.2e-85	78.22	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HK49	8.7e-80	75.58	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7UVV8	9.6e-79	74.11	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C5Y5	9.6e-79	74.11	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0023832 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07090.1	3.3e-71	80.12	Protein of unknown function (DUF640)	[more]
AT2G31160.1	7.5e-68	68.18	Protein of unknown function (DUF640)	[more]
AT5G58500.1	3.5e-65	78.81	Protein of unknown function (DUF640)	[more]
AT3G23290.2	1.0e-64	70.73	Protein of unknown function (DUF640)	[more]
AT2G42610.1	4.0e-61	72.60	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 36..153 e-value: 2.0E-65 score: 218.7
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 40..167 score: 83.839668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..228
None	No IPR available	PANTHER	PTHR31165:SF59	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 18..203
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 18..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023832.1	Sed0023832.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus