Sed0023714 (gene) Chayote v1

Overview
NameSed0023714
Typegene
OrganismSechium edule (Chayote v1)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7
LocationLG13: 303283 .. 305450 (-)
RNA-Seq ExpressionSed0023714
SyntenySed0023714
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAAAATGAAGATAGCACACAGCGATGAGTACTCCAATTCCGACACTGCGTTTTGCTACACCGGTAATCTAATCTCTCTTTGCTTTCTTCTCCGGCGAATCGTATCGGAATCTTCACCTTCTTCATAAATATCTTCCGTTTTTGCAGATCATAGAGGTGTGGGCGGGAATTTCTCGTGCCTTTAACTTTCCTCCGCGGTTACAGGTCGAAATTTGAGAGATCCTTTCATCAATGGAGTTAGCGATGTTATCTTCGGCCCTCATTTTTCATGTTTTCTTGTTCAAGTTTTCAGGTCATCGCCAGGAAGCAAAGAGATGGTCAAAGTGTTGGCCGGCGAGTGTGGCGACGAAGGAAATTGGTACGGACTACGTGCTTTTTCTTTCTCTTTGTTAAATTAGATGTCTCACACTATTTACTCCTTTGGATTGTGGAATTAGTTCTACAACCGAACATCTATACAAAAATGAAACTCTGTCCTTGTGTTTGGACGAGTAGTTGCATGAAGTGATTAGAAATTAAGGTTATAGTAATAGCTCATTTAGATGTGGATTTTTGTAGAGGAGTGGAAGGTAATAGCTCGTTTGCAACCAATAGCATGTTCAGATGTAAATTTTTGTACAGGAGTGGCAGTCAATAGCTCGGTCGGATATATATTTTGTGGAGAAATTACATAAATGATGATTAGGTTTGAAATGAAAAGTTATTTTGAATGATTAAATCTAAGTAGTTATTATGGATGGCTGCAATAGGTTGTAAATGCTCATTTGTAACTCCGCCACTGACCCCCAAAATCAAACACTCCCGATTCACATTAAAGAAAAAAAATGGAAGATTTGAAATGTGCTAATTTGACCTAAAACTTGCCATTTCTTTGATCAACCTAGAATAGACGTGTATCAGTTGCCAACTTTTCTCTAGCTTGTTATCTTTTCATATTTTTTGAATATATGGTTTCTGTTAAAAAAAAGAAAGAAATAAAGAAAAGGGGAGAGATTTTTTTCAGGCATCCTTGTGGATATTATTTCTTTGCTGTTAAAATGTTTGCAACAACAGTTTACAACAGAGATATGTGAACTTTGGGAAAAAGAAATTTGGTCTATTTGGTGCTTATCGCGCCAAGTAGTGGAGATATTATGCTTGTTGTTATAGCTTCTATTTTCTGATTAATGCCACAGAATTCATGGTGTTTTTTGATAGCTGTCTAAATGTGGGTGTGTCCAAAATGATTCTGTTTTCCATCCATGAAACTTTGACACATGCACCATGGGTAGTTAAAAACACTCTAGAATGTGGGATTATAGATTCAAATCACATGGAGAGATAGGATATTCAAATTCTACAAGTTTCTTAGTGACCATTTAGATAGATCAGGCAGTTGTCTAGTTTAAGTTGGGCGAGATGAATTGACCCAATTAGTTCAAGGACTGTACACTTATCATTTATCATCATTTTGACTGAGTGTTTATGCTCTCATTTTCATCGAAACTTTCAATTTCATTTCTTATTCAGACGAAGAAGGATCATATGTCGCATTACACAATGGATCGAACCCCGTTCCTAGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTGATAACAATGGACATCGAAAGACTACTATTATCCGAGGACAACCGGTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAATATGGGGGTTCGAAGAAAGCTATTCTTCACGTTCTTAGCAACCGGGTGAATGATGCAGGGTTCTATAGGCCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGCCCCCATTATCTGAAAGAAGAATTTACTTGAAGAAGATTATTACAAAATCCATTTTCTTACAATAAAGACTGCCAGAATATTAATCTGCTATTCCCAATTTTTAAATGTTGGCCCTTTTAGTATATTTCTCTTCTGATTGATGCATGTAAGGTCCGTTTTTGCTTACCCTTTATTAGGGAATGACAAAGACAAACCATACTAAAGTCGAGACATTTGAGAAACTGACTACTTGCTCCTAGCCAAACTTTTTAGGGATGATGAATCAGATATTTGCATTTTCATTTTTCTTATATGTAACAAAGCTTTCCTACTTATTTCTTGCAATCCCCATTAAATGGACATGAATAAAAGA

mRNA sequence

CCGAAAATGAAGATAGCACACAGCGATGAGTACTCCAATTCCGACACTGCGTTTTGCTACACCGATCATAGAGGTGTGGGCGGGAATTTCTCGTGCCTTTAACTTTCCTCCGCGGTTACAGGTCATCGCCAGGAAGCAAAGAGATGGTCAAAGTGTTGGCCGGCGAGTGTGGCGACGAAGGAAATTGACGAAGAAGGATCATATGTCGCATTACACAATGGATCGAACCCCGTTCCTAGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTGATAACAATGGACATCGAAAGACTACTATTATCCGAGGACAACCGGTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAATATGGGGGTTCGAAGAAAGCTATTCTTCACGTTCTTAGCAACCGGGTGAATGATGCAGGGTTCTATAGGCCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGCCCCCATTATCTGAAAGAAGAATTTACTTGAAGAAGATTATTACAAAATCCATTTTCTTACAATAAAGACTGCCAGAATATTAATCTGCTATTCCCAATTTTTAAATGTTGGCCCTTTTAGTATATTTCTCTTCTGATTGATGCATGTAAGGTCCGTTTTTGCTTACCCTTTATTAGGGAATGACAAAGACAAACCATACTAAAGTCGAGACATTTGAGAAACTGACTACTTGCTCCTAGCCAAACTTTTTAGGGATGATGAATCAGATATTTGCATTTTCATTTTTCTTATATGTAACAAAGCTTTCCTACTTATTTCTTGCAATCCCCATTAAATGGACATGAATAAAAGA

Coding sequence (CDS)

ATGAGTACTCCAATTCCGACACTGCGTTTTGCTACACCGATCATAGAGGTGTGGGCGGGAATTTCTCGTGCCTTTAACTTTCCTCCGCGGTTACAGGTCATCGCCAGGAAGCAAAGAGATGGTCAAAGTGTTGGCCGGCGAGTGTGGCGACGAAGGAAATTGACGAAGAAGGATCATATGTCGCATTACACAATGGATCGAACCCCGTTCCTAGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTGATAACAATGGACATCGAAAGACTACTATTATCCGAGGACAACCGGTTCGATTTTGTGAATGAGGTTGCAGCGGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAATATGGGGGTTCGAAGAAAGCTATTCTTCACGTTCTTAGCAACCGGGTGAATGATGCAGGGTTCTATAGGCCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGCCCCCATTATCTGAAAGAAGAATTTACTTGA

Protein sequence

MSTPIPTLRFATPIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHMSHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT
Homology
[Close]
BLAST of Sed0023714 vs. NCBI nr
Match: KAG6576638.1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294.3 bits (752), Expect = 6.6e-76
Identity = 146/165 (88.48%), Postives = 153/165 (92.73%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHM 60
           M+TPIPTL FA+P I+  AGIS  FNFPPRLQV ARKQRDG+ VGRRVWRRRKLTKKD M
Sbjct: 1   MTTPIPTLSFASPRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDDM 60

Query: 61  SHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDE 120
           S + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDE
Sbjct: 61  SIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDE 120

Query: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Sed0023714 vs. NCBI nr
Match: XP_022984517.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 145/165 (87.88%), Postives = 153/165 (92.73%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHM 60
           M++PIPTL FA+P I+  AGIS  FNFPPRLQV ARKQRDG+ VGRRVWRRRKLTKKD M
Sbjct: 1   MTSPIPTLSFASPRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDEM 60

Query: 61  SHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDE 120
           S + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDE
Sbjct: 61  SIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDE 120

Query: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Sed0023714 vs. NCBI nr
Match: XP_023553428.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.4 bits (747), Expect = 2.5e-75
Identity = 144/165 (87.27%), Postives = 153/165 (92.73%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHM 60
           M+TPIPTL FA+P I+  AGIS  FNFPPRLQ+ ARKQRDG+ VGRRVWRRRKLTKKD M
Sbjct: 1   MTTPIPTLSFASPRIQTRAGISHGFNFPPRLQMAARKQRDGEGVGRRVWRRRKLTKKDEM 60

Query: 61  SHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDE 120
           S + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAK+YVE+NRDE
Sbjct: 61  SIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKDYVENNRDE 120

Query: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Sed0023714 vs. NCBI nr
Match: KAG7014690.1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.8 bits (743), Expect = 7.3e-75
Identity = 146/168 (86.90%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPI---IEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKK 60
           M+TPIPTL FA+P+   I+  AGIS  FNFPPRLQV ARKQRDG+ VGRRVWRRRKLTKK
Sbjct: 1   MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DHMSHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESN 120
           D MS + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+N
Sbjct: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of Sed0023714 vs. NCBI nr
Match: XP_022923078.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 290.4 bits (742), Expect = 9.6e-75
Identity = 144/165 (87.27%), Postives = 152/165 (92.12%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHM 60
           M+TPIPTL FA+P I+  AG+S  FNFP RLQV ARKQRDG+ VGRRVWRRRKLTKKD M
Sbjct: 1   MTTPIPTLSFASPRIQTRAGLSHGFNFPSRLQVAARKQRDGEGVGRRVWRRRKLTKKDDM 60

Query: 61  SHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDE 120
           S + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDE
Sbjct: 61  SIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDE 120

Query: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Sed0023714 vs. ExPASy Swiss-Prot
Match: Q8VZV9 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-46
Identity = 100/153 (65.36%), Postives = 114/153 (74.51%), Query Frame = 0 

Query: 13  PIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHMSHYTMDRTPFLE 72
           PII+  +G  R      + QV    QRD    GRRVWRRR LTKKD M  Y M R PF+E
Sbjct: 14  PIIDTRSGNLRC---TFQSQVSCGIQRDDN--GRRVWRRRTLTKKDDMLRYKMQRVPFVE 73

Query: 73  EQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVL 132
           EQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVL
Sbjct: 74  EQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVL 133

Query: 133 SNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           SNRVND GF RP+AY E DP+KPGP YL E +T
Sbjct: 134 SNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of Sed0023714 vs. ExPASy TrEMBL
Match: A0A6J1J2D6 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482787 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.2e-76
Identity = 145/165 (87.88%), Postives = 153/165 (92.73%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHM 60
           M++PIPTL FA+P I+  AGIS  FNFPPRLQV ARKQRDG+ VGRRVWRRRKLTKKD M
Sbjct: 1   MTSPIPTLSFASPRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDEM 60

Query: 61  SHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDE 120
           S + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDE
Sbjct: 61  SIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDE 120

Query: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Sed0023714 vs. ExPASy TrEMBL
Match: A0A6J1E8L1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430856 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.6e-75
Identity = 144/165 (87.27%), Postives = 152/165 (92.12%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHM 60
           M+TPIPTL FA+P I+  AG+S  FNFP RLQV ARKQRDG+ VGRRVWRRRKLTKKD M
Sbjct: 1   MTTPIPTLSFASPRIQTRAGLSHGFNFPSRLQVAARKQRDGEGVGRRVWRRRKLTKKDDM 60

Query: 61  SHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDE 120
           S + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDE
Sbjct: 61  SIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDE 120

Query: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 YGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Sed0023714 vs. ExPASy TrEMBL
Match: A0A6J1J5H1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482787 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.9e-75
Identity = 145/168 (86.31%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPI---IEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKK 60
           M++PIPTL FA+P+   I+  AGIS  FNFPPRLQV ARKQRDG+ VGRRVWRRRKLTKK
Sbjct: 1   MTSPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DHMSHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESN 120
           D MS + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+N
Sbjct: 61  DEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of Sed0023714 vs. ExPASy TrEMBL
Match: A0A6J1E559 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430856 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.1e-74
Identity = 144/168 (85.71%), Postives = 153/168 (91.07%), Query Frame = 0 

Query: 1   MSTPIPTLRFATPI---IEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKK 60
           M+TPIPTL FA+P+   I+  AG+S  FNFP RLQV ARKQRDG+ VGRRVWRRRKLTKK
Sbjct: 1   MTTPIPTLSFASPLFQRIQTRAGLSHGFNFPSRLQVAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DHMSHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESN 120
           D MS + MDR PFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+N
Sbjct: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLK+EFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of Sed0023714 vs. ExPASy TrEMBL
Match: A0A6J1CJC0 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Momordica charantia OX=3673 GN=LOC111011526 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.3e-72
Identity = 143/167 (85.63%), Postives = 150/167 (89.82%), Query Frame = 0 

Query: 1   MSTPIPTLRF-ATPI--IEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKK 60
           MSTPIPTL F ++P+  IE  AGIS  FNFPPR +V+ARKQR  +  GRRVWRRRKL KK
Sbjct: 1   MSTPIPTLSFVSSPVTRIEARAGISHTFNFPPRSKVVARKQRIDEGGGRRVWRRRKLMKK 60

Query: 61  DHMSHYTMDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESN 120
           D MSHY MDR PFLEEQVRKVKEQGKL+TMDIERLLLSEDNRFDFVNEVAAEAKEYVESN
Sbjct: 61  DDMSHYKMDRIPFLEEQVRKVKEQGKLVTMDIERLLLSEDNRFDFVNEVAAEAKEYVESN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEF 165
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEF
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEF 167

[Close]
BLAST of Sed0023714 vs. TAIR 10
Match: AT5G24314.1 (plastid transcriptionally active7 )

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-47
Identity = 100/153 (65.36%), Postives = 114/153 (74.51%), Query Frame = 0 

Query: 13  PIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRKLTKKDHMSHYTMDRTPFLE 72
           PII+  +G  R      + QV    QRD    GRRVWRRR LTKKD M  Y M R PF+E
Sbjct: 14  PIIDTRSGNLRC---TFQSQVSCGIQRDDN--GRRVWRRRTLTKKDDMLRYKMQRVPFVE 73

Query: 73  EQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVL 132
           EQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVL
Sbjct: 74  EQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVL 133

Query: 133 SNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           SNRVND GF RP+AY E DP+KPGP YL E +T
Sbjct: 134 SNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of Sed0023714 vs. TAIR 10
Match: AT5G24314.2 (plastid transcriptionally active7 )

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45
Identity = 100/161 (62.11%), Postives = 114/161 (70.81%), Query Frame = 0 

Query: 13  PIIEVWAGISRAFNFPPRLQVIARKQRDGQSVGRRVWRRRK--------LTKKDHMSHYT 72
           PII+  +G  R      + QV    QRD    GRRVWRRR         LTKKD M  Y 
Sbjct: 14  PIIDTRSGNLRC---TFQSQVSCGIQRDDN--GRRVWRRRTLVSTKLDILTKKDDMLRYK 73

Query: 73  MDRTPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGS 132
           M R PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGS
Sbjct: 74  MQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGS 133

Query: 133 KKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKEEFT 166
           KKAI HVLSNRVND GF RP+AY E DP+KPGP YL E +T
Sbjct: 134 KKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 169

The following BLAST results are available for this feature:
BLAST of Sed0023714 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6576638.16.6e-7688.48Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, partial [Cucurbita argyrosperma subs... [more]
XP_022984517.11.5e-7587.88protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita maxima][more]
XP_023553428.12.5e-7587.27protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucurbita pepo subsp. pep... [more]
KAG7014690.17.3e-7586.90Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucurbita argyrosperma subsp. argyro... [more]
XP_022923078.19.6e-7587.27protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita moschata][more]
BLAST of Sed0023714 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZV92.0e-4665.36Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT... [more]
BLAST of Sed0023714 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J2D67.2e-7687.88protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita maxima O... [more]
A0A6J1E8L14.6e-7587.27protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 OS=Cucurbita moschata... [more]
A0A6J1J5H17.9e-7586.31protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1E5595.1e-7485.71protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 OS=Cucurbita moschata... [more]
A0A6J1CJC06.3e-7285.63protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Momordica charantia OX=3673 GN=LOC... [more]
BLAST of Sed0023714 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24314.11.4e-4765.36plastid transcriptionally active7 [more]
AT5G24314.22.2e-4562.11plastid transcriptionally active7 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038958Protein plastid transcriptionally active 7PANTHERPTHR37257PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 7coord: 25..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0023714.1Sed0023714.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042793 plastid transcription
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0003723 RNA binding