Sed0023574 (gene) Chayote v1

Overview


Name	Sed0023574
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Copper transporter
Location	LG04: 25377179 .. 25377835 (+)
RNA-Seq Expression	Sed0023574
Synteny	Sed0023574

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGAAAACGACGTGTTATCACAACCCAGGCGGCGTTTCACCACCGGCGCCGGAGAACAATCCGGGCGGGAAGGCGGTGGTGCACAATTCATTATACTGGGGGCACGACGCGCAAGTTCTGTTCACCGGATGGCCCGGTGCCAACTCCGCCATGTACGCATTGGCGGTGGTGGCGGTGTTCGTGGTGGCGGTGTTCGTGGAATGGATGACTTATTGGAAGTTCATGAAGCGGAGCGCCGACGACGTGTCCACGGTGGTGCTGCAGACGGCGATACACGCTGTACGTACTGGCTTGAGCTACATGGTGGTGCTGTCCGTCGTGTCGTTCAACGGCGGGATCTTCCTGGCGGCGGTGGGTGGCCACGCTCTGGGCTTTGTTCTCTTTAGAGCCCGAGCCAAGAGAACGGATGACTCGGATTCTCGCAAACTCAATGCTCCAATCACATTCTAATCTCGTCCTAGATGATGGGCTTCCCCCCCAAAGGCCCAATACTACAAAAGCCTATCAACAGGCTGTTGCTTCTTTTTTTTTTTATTAAAAGTATTCGGTTTAAGGAAATTGAAACACATAATAAGCTATTTAAGATGAGTTATATTATGTGACCTTTATAGTTAAATGATTAAAATGATTAAAGACACAAGGATAAATAAA

mRNA sequence

ATGGCTCTGAAAACGACGTGTTATCACAACCCAGGCGGCGTTTCACCACCGGCGCCGGAGAACAATCCGGGCGGGAAGGCGGTGGTGCACAATTCATTATACTGGGGGCACGACGCGCAAGTTCTGTTCACCGGATGGCCCGGTGCCAACTCCGCCATGTACGCATTGGCGGTGGTGGCGGTGTTCGTGGTGGCGGTGTTCGTGGAATGGATGACTTATTGGAAGTTCATGAAGCGGAGCGCCGACGACGTGTCCACGGTGGTGCTGCAGACGGCGATACACGCTGTACGTACTGGCTTGAGCTACATGGTGGTGCTGTCCGTCGTGTCGTTCAACGGCGGGATCTTCCTGGCGGCGGTGGGTGGCCACGCTCTGGGCTTTGTTCTCTTTAGAGCCCGAGCCAAGAGAACGGATGACTCGGATTCTCGCAAACTCAATGCTCCAATCACATTCTAATCTCGTCCTAGATGATGGGCTTCCCCCCCAAAGGCCCAATACTACAAAAGCCTATCAACAGGCTGTTGCTTCTTTTTTTTTTTATTAAAAGTATTCGGTTTAAGGAAATTGAAACACATAATAAGCTATTTAAGATGAGTTATATTATGTGACCTTTATAGTTAAATGATTAAAATGATTAAAGACACAAGGATAAATAAA

Coding sequence (CDS)

ATGGCTCTGAAAACGACGTGTTATCACAACCCAGGCGGCGTTTCACCACCGGCGCCGGAGAACAATCCGGGCGGGAAGGCGGTGGTGCACAATTCATTATACTGGGGGCACGACGCGCAAGTTCTGTTCACCGGATGGCCCGGTGCCAACTCCGCCATGTACGCATTGGCGGTGGTGGCGGTGTTCGTGGTGGCGGTGTTCGTGGAATGGATGACTTATTGGAAGTTCATGAAGCGGAGCGCCGACGACGTGTCCACGGTGGTGCTGCAGACGGCGATACACGCTGTACGTACTGGCTTGAGCTACATGGTGGTGCTGTCCGTCGTGTCGTTCAACGGCGGGATCTTCCTGGCGGCGGTGGGTGGCCACGCTCTGGGCTTTGTTCTCTTTAGAGCCCGAGCCAAGAGAACGGATGACTCGGATTCTCGCAAACTCAATGCTCCAATCACATTCTAA

Protein sequence

MALKTTCYHNPGGVSPPAPENNPGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHALGFVLFRARAKRTDDSDSRKLNAPITF

Homology

[Close]

BLAST of Sed0023574 vs. NCBI nr
Match: KAG7027927.1 (Copper transporter 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234.2 bits (596), Expect = 7.5e-58
Identity = 118/156 (75.64%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNP-----GGKAVVHNSLYWGHDAQVLFTGWPGANSAMYA 60
           MALKTT +HN G V PPA E+NP      GK VVH +LYWGHDAQVLFTGWPG NSAMYA
Sbjct: 1   MALKTTSHHNLGAVPPPAVESNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 60

Query: 61  LAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGI 120
           LAV+ VFV+AVFVEW+TY  FMK SAD+V TVVLQTAIH VRTGL+YMV+LSV+SFNGGI
Sbjct: 61  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHTVRTGLNYMVILSVMSFNGGI 120

Query: 121 FLAAVGGHALGFVLFRARAKRTDDSDSRKLNAPITF 152
           FLAAVGGHA+GFVLFRARAKR  +SDS K N P+TF
Sbjct: 121 FLAAVGGHAVGFVLFRARAKRKAESDSPKPNGPLTF 156

[Close]

BLAST of Sed0023574 vs. NCBI nr
Match: KAG6596378.1 (Copper transporter 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.2 bits (596), Expect = 7.5e-58
Identity = 118/156 (75.64%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNP-----GGKAVVHNSLYWGHDAQVLFTGWPGANSAMYA 60
           MALKTT +HN G V PPA E+NP      GK VVH +LYWGHDAQVLFTGWPG NSAMYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVESNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 61

Query: 61  LAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGI 120
           LAV+ VFV+AVFVEW+TY  FMK SAD+V TVVLQTAIH VRTGL+YMV+LSV+SFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHTVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHALGFVLFRARAKRTDDSDSRKLNAPITF 152
           FLAAVGGHA+GFVLFRARAKR  +SDS K N P+TF
Sbjct: 122 FLAAVGGHAVGFVLFRARAKRKAESDSPKPNGPLTF 157

[Close]

BLAST of Sed0023574 vs. NCBI nr
Match: XP_022971334.1 (copper transporter 6-like [Cucurbita maxima])

HSP 1 Score: 232.6 bits (592), Expect = 2.2e-57
Identity = 117/156 (75.00%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNP-----GGKAVVHNSLYWGHDAQVLFTGWPGANSAMYA 60
           MALKTT +HN GGV PPA E+NP      GK VVH +LYWGHDAQVLFTGWPG NSAMYA
Sbjct: 81  MALKTTSHHNLGGVPPPAVESNPANTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 140

Query: 61  LAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGI 120
           LAV+ VFV+AVFVEW+TY  FMK+SAD+V TVVLQ+AIHAVRTGL YMV+LSV+SFNGGI
Sbjct: 141 LAVIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQSAIHAVRTGLKYMVMLSVMSFNGGI 200

Query: 121 FLAAVGGHALGFVLFRARAKRTDDSDSRKLNAPITF 152
           FLAAVGGHA+GFVLFR RA+R  +SDS K N P+TF
Sbjct: 201 FLAAVGGHAVGFVLFRGRAERKAESDSPKPNGPLTF 236

[Close]

BLAST of Sed0023574 vs. NCBI nr
Match: XP_022941866.1 (copper transporter 4-like [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 3.7e-57
Identity = 118/156 (75.64%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNP-----GGKAVVHNSLYWGHDAQVLFTGWPGANSAMYA 60
           MALKTT +HN G V PPA E NP      GK VVH +LYWGHDAQVLFTGWP  NSAMYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPSTNSAMYA 61

Query: 61  LAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGI 120
           LAV+ VFV+AVFVEW+TY  FMK SAD+V TVVLQTAIHAVRTGL+YMV+LSV+SFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHALGFVLFRARAKRTDDSDSRKLNAPITF 152
           FLAAVGGHA+GFVLFRARAKR   SDS K N P+TF
Sbjct: 122 FLAAVGGHAVGFVLFRARAKRKAKSDSPKPNGPLTF 157

[Close]

BLAST of Sed0023574 vs. NCBI nr
Match: XP_023540707.1 (copper transporter 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.8 bits (582), Expect = 3.1e-56
Identity = 116/153 (75.82%), Postives = 128/153 (83.66%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNP-----GGKAVVHNSLYWGHDAQVLFTGWPGANSAMYA 60
           MALKTT +HN G V PPA E NP      GK VVH +LYWGHDAQVLFTGWPG NSAMYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 61

Query: 61  LAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGI 120
           LAV+ VFV+AVFVEW+TY  FMK+SAD+V TVVLQTAIHAVRTGL+YMV+LSV+SFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHALGFVLFRARAKRTDDSDSRKLNAP 149
           FLAAVGGHA+GFVLFRAR KR  +SDS K N P
Sbjct: 122 FLAAVGGHAVGFVLFRARVKRKAESDSPKPNGP 154

[Close]

BLAST of Sed0023574 vs. ExPASy Swiss-Prot
Match: Q8SAA5 (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-27
Identity = 58/120 (48.33%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 23  PGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVAVFVEWMTYW---KFMKR 82
           P   +++H + YWG++ QVLF+GWPG++  MYALA++ VF +A   EW+        +K+
Sbjct: 24  PHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQ 83

Query: 83  SADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHALGFVLFRARAKRTDD 140
            AD ++ V  +TA++ V++G SY+V+L+VVSFNGG+FLAA+ GHALGF +FR RA R  D
Sbjct: 84  GADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRNRD 143

[Close]

BLAST of Sed0023574 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 58/144 (40.28%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 10  NPGGVSPPAPENNPGG----KAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVA 69
           +P  +      N  GG    K ++H + +WG + +VLF+GWPG +S MYAL ++ VF +A
Sbjct: 19  SPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLA 78

Query: 70  VFVEWMTYWKFMKRSADDV---STVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGG 129
           V  EW+ +   ++ S  D    +  ++QTA++ +R GL+Y+V+L+V+SFN G+FL A+ G
Sbjct: 79  VLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAG 138

Query: 130 HALGFVLFRARAKRTDDSDSRKLN 147
           HA+GF+LF ++  R + SD RK N
Sbjct: 139 HAVGFMLFGSQTFR-NTSDDRKTN 161

[Close]

BLAST of Sed0023574 vs. ExPASy Swiss-Prot
Match: Q9FGU8 (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 55/138 (39.86%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 13  GVSPPAPENNPGG--------KAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVV 72
           G SP AP  +P            ++H + +WG   +VLF GWPG +  MY + +  +FV+
Sbjct: 6   GSSPAAPAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVI 65

Query: 73  AVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHA 132
           + F E ++   FMK     +   +LQTA++ VR  LSY+V+L+V+SFNGG+F+AA+ G  
Sbjct: 66  SAFSECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFG 125

Query: 133 LGFVLFRARAKRTDDSDS 143
           LGF++F +RA R   S+S
Sbjct: 126 LGFMIFGSRAFRATSSNS 143

[Close]

BLAST of Sed0023574 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-22
Identity = 48/137 (35.04%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 12  GGVSPPAP----ENNPGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVAVF 71
           G + P +P     +      ++H + +WG + ++LF+GWPG +  MY L ++ VF++AV 
Sbjct: 4   GNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVI 63

Query: 72  VEWMTYWKFMK-RSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHALG 131
           VEW+ +   ++ R +   +  ++QTA++ ++TGL+Y+V+L+V+SFNGG+F+ A+ G A+G
Sbjct: 64  VEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 123

Query: 132 FVLFRARAKRTDDSDSR 144
           F+LF + A +    D +
Sbjct: 124 FMLFGSTAFKNPSDDEK 140

[Close]

BLAST of Sed0023574 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.9e-22
Identity = 51/142 (35.92%), Postives = 92/142 (64.79%), Query Frame = 0


Query: 16  PPAPENNPGGK------AVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVAVFVE 75
           PP+P ++           ++H + +WG + +VLF+GWPG +S MYAL ++ +F++AV  E
Sbjct: 11  PPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAE 70

Query: 76  WMTYWKFMKRS-ADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHALGFV 135
           W+ +   ++ S + + +  + QTA++ ++TGLSY+V+L+V+SFN G+F+ A+ G+ +GF 
Sbjct: 71  WLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFF 130

Query: 136 LFRARA--KRTDDSDSRKLNAP 149
           LF +    K +DD  + +L  P
Sbjct: 131 LFGSTTFKKPSDDQKTAELLPP 152

[Close]

BLAST of Sed0023574 vs. ExPASy TrEMBL
Match: A0A6J1I894 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111470087 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 117/156 (75.00%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNP-----GGKAVVHNSLYWGHDAQVLFTGWPGANSAMYA 60
           MALKTT +HN GGV PPA E+NP      GK VVH +LYWGHDAQVLFTGWPG NSAMYA
Sbjct: 81  MALKTTSHHNLGGVPPPAVESNPANTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 140

Query: 61  LAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGI 120
           LAV+ VFV+AVFVEW+TY  FMK+SAD+V TVVLQ+AIHAVRTGL YMV+LSV+SFNGGI
Sbjct: 141 LAVIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQSAIHAVRTGLKYMVMLSVMSFNGGI 200

Query: 121 FLAAVGGHALGFVLFRARAKRTDDSDSRKLNAPITF 152
           FLAAVGGHA+GFVLFR RA+R  +SDS K N P+TF
Sbjct: 201 FLAAVGGHAVGFVLFRGRAERKAESDSPKPNGPLTF 236

[Close]

BLAST of Sed0023574 vs. ExPASy TrEMBL
Match: A0A6J1FMA0 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111447095 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.8e-57
Identity = 118/156 (75.64%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNP-----GGKAVVHNSLYWGHDAQVLFTGWPGANSAMYA 60
           MALKTT +HN G V PPA E NP      GK VVH +LYWGHDAQVLFTGWP  NSAMYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPSTNSAMYA 61

Query: 61  LAVVAVFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGI 120
           LAV+ VFV+AVFVEW+TY  FMK SAD+V TVVLQTAIHAVRTGL+YMV+LSV+SFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHALGFVLFRARAKRTDDSDSRKLNAPITF 152
           FLAAVGGHA+GFVLFRARAKR   SDS K N P+TF
Sbjct: 122 FLAAVGGHAVGFVLFRARAKRKAKSDSPKPNGPLTF 157

[Close]

BLAST of Sed0023574 vs. ExPASy TrEMBL
Match: A0A6J1CV92 (Copper transporter OS=Momordica charantia OX=3673 GN=LOC111015103 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.4e-54
Identity = 112/150 (74.67%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 1   MALKTTCYHNPGGVSPPAPENNPGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVA 60
           + LK T  HN G V PPA E N  GK VVH SLYW HDAQVLFTGWPGA+SAMYALAV+ 
Sbjct: 11  LKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIF 70

Query: 61  VFVVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAV 120
           VFV+AV VEW+TY  FMK+SA+ VS  VLQTAIHAVRTGLSYMV+LSV+SFNGGIFLAAV
Sbjct: 71  VFVLAVLVEWLTYCNFMKQSAESVSKAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAV 130

Query: 121 GGHALGFVLFRARAKRTDDSDSRKLNAPIT 151
           GGHA+GFVLFRARAKR  +SDS K N PI+
Sbjct: 131 GGHAVGFVLFRARAKRKSESDSTKPNGPIS 160

[Close]

BLAST of Sed0023574 vs. ExPASy TrEMBL
Match: A0A0A0LD01 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_3G733240 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.9e-47
Identity = 96/136 (70.59%), Postives = 112/136 (82.35%), Query Frame = 0


Query: 3   LKTTCYHNPGGVSPPAPENNPGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVF 62
           +KTT +HN G V PP+ E NP  KAVVH SLYWGHDAQVLFTGWPG NS MYALAV+ VF
Sbjct: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 63  VVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGG 122
           V+AV VEW+    FMK++ + V  VV+QTAIHAVRTGLSYMV+L+V+SFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 123 HALGFVLFRARAKRTD 139
           HA+GFVLF+ R +R D
Sbjct: 121 HAVGFVLFKRRGERKD 136

[Close]

BLAST of Sed0023574 vs. ExPASy TrEMBL
Match: A0A5A7TLC7 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001240 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.2e-46
Identity = 94/136 (69.12%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 3   LKTTCYHNPGGVSPPAPENNPGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVF 62
           +KTT +HN G V PP+PE NP  K   H SLYWGHDAQVLFTGWPG NS MYALAV+ VF
Sbjct: 1   MKTTSHHNLGAVPPPSPETNPAEKTGAHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 63  VVAVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGG 122
           V+AV VEW+    FMK++ + V  VV QTAIHAVRTGLSYMV+L+V+SFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVWKVVGQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 123 HALGFVLFRARAKRTD 139
           HA+GFVLF+ R +R D
Sbjct: 121 HAVGFVLFKKRGERKD 136

[Close]

BLAST of Sed0023574 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-28
Identity = 58/120 (48.33%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 23  PGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVAVFVEWMTYW---KFMKR 82
           P   +++H + YWG++ QVLF+GWPG++  MYALA++ VF +A   EW+        +K+
Sbjct: 24  PHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQ 83

Query: 83  SADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHALGFVLFRARAKRTDD 140
            AD ++ V  +TA++ V++G SY+V+L+VVSFNGG+FLAA+ GHALGF +FR RA R  D
Sbjct: 84  GADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRNRD 143

[Close]

BLAST of Sed0023574 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 58/144 (40.28%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 10  NPGGVSPPAPENNPGG----KAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVA 69
           +P  +      N  GG    K ++H + +WG + +VLF+GWPG +S MYAL ++ VF +A
Sbjct: 19  SPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLA 78

Query: 70  VFVEWMTYWKFMKRSADDV---STVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGG 129
           V  EW+ +   ++ S  D    +  ++QTA++ +R GL+Y+V+L+V+SFN G+FL A+ G
Sbjct: 79  VLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAG 138

Query: 130 HALGFVLFRARAKRTDDSDSRKLN 147
           HA+GF+LF ++  R + SD RK N
Sbjct: 139 HAVGFMLFGSQTFR-NTSDDRKTN 161

[Close]

BLAST of Sed0023574 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23
Identity = 55/138 (39.86%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 13  GVSPPAPENNPGG--------KAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVV 72
           G SP AP  +P            ++H + +WG   +VLF GWPG +  MY + +  +FV+
Sbjct: 6   GSSPAAPAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVI 65

Query: 73  AVFVEWMTYWKFMKRSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHA 132
           + F E ++   FMK     +   +LQTA++ VR  LSY+V+L+V+SFNGG+F+AA+ G  
Sbjct: 66  SAFSECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFG 125

Query: 133 LGFVLFRARAKRTDDSDS 143
           LGF++F +RA R   S+S
Sbjct: 126 LGFMIFGSRAFRATSSNS 143

[Close]

BLAST of Sed0023574 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 48/137 (35.04%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 12  GGVSPPAP----ENNPGGKAVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVAVF 71
           G + P +P     +      ++H + +WG + ++LF+GWPG +  MY L ++ VF++AV 
Sbjct: 4   GNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVI 63

Query: 72  VEWMTYWKFMK-RSADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHALG 131
           VEW+ +   ++ R +   +  ++QTA++ ++TGL+Y+V+L+V+SFNGG+F+ A+ G A+G
Sbjct: 64  VEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 123

Query: 132 FVLFRARAKRTDDSDSR 144
           F+LF + A +    D +
Sbjct: 124 FMLFGSTAFKNPSDDEK 140

[Close]

BLAST of Sed0023574 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23
Identity = 51/142 (35.92%), Postives = 92/142 (64.79%), Query Frame = 0


Query: 16  PPAPENNPGGK------AVVHNSLYWGHDAQVLFTGWPGANSAMYALAVVAVFVVAVFVE 75
           PP+P ++           ++H + +WG + +VLF+GWPG +S MYAL ++ +F++AV  E
Sbjct: 11  PPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAE 70

Query: 76  WMTYWKFMKRS-ADDVSTVVLQTAIHAVRTGLSYMVVLSVVSFNGGIFLAAVGGHALGFV 135
           W+ +   ++ S + + +  + QTA++ ++TGLSY+V+L+V+SFN G+F+ A+ G+ +GF 
Sbjct: 71  WLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFF 130

Query: 136 LFRARA--KRTDDSDSRKLNAP 149
           LF +    K +DD  + +L  P
Sbjct: 131 LFGSTTFKKPSDDQKTAELLPP 152

The following BLAST results are available for this feature:

BLAST of Sed0023574 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027927.1	7.5e-58	75.64	Copper transporter 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596378.1	7.5e-58	75.64	Copper transporter 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022971334.1	2.2e-57	75.00	copper transporter 6-like [Cucurbita maxima]	[more]
XP_022941866.1	3.7e-57	75.64	copper transporter 4-like [Cucurbita moschata]	[more]
XP_023540707.1	3.1e-56	75.82	copper transporter 4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0023574 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8SAA5	7.1e-27	48.33	Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2	[more]
Q39065	3.3e-24	40.28	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q9FGU8	1.8e-22	39.86	Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1	[more]
Q8GWP3	2.4e-22	35.04	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q9STG2	6.9e-22	35.92	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]

BLAST of Sed0023574 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I894	1.1e-57	75.00	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111470087 PE=3 SV=1	[more]
A0A6J1FMA0	1.8e-57	75.64	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111447095 PE=3 SV=1	[more]
A0A6J1CV92	1.4e-54	74.67	Copper transporter OS=Momordica charantia OX=3673 GN=LOC111015103 PE=3 SV=1	[more]
A0A0A0LD01	2.9e-47	70.59	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_3G733240 PE=3 SV=1	[more]
A0A5A7TLC7	9.2e-46	69.12	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]

BLAST of Sed0023574 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37925.1	5.0e-28	48.33	copper transporter 4	[more]
AT5G59030.1	2.3e-25	40.28	copper transporter 1	[more]
AT5G59040.1	1.3e-23	39.86	copper transporter 3	[more]
AT2G26975.1	1.7e-23	35.04	Ctr copper transporter family	[more]
AT3G46900.1	4.9e-23	35.92	copper transporter 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 35..77 e-value: 1.2E-5 score: 25.9 coord: 85..130 e-value: 1.5E-8 score: 35.4
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 20..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12483:SF94	COPPER TRANSPORTER 4	coord: 20..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023574.1	Sed0023574.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity