Sed0023489 (gene) Chayote v1

Overview


Name	Sed0023489
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ethylene-responsive transcription factor, putative
Location	LG10: 1560065 .. 1560616 (-)
RNA-Seq Expression	Sed0023489
Synteny	Sed0023489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTTGTGTTTAGCCACCAAAATCCCGTCTTCAAAATCGCCTCTAAAACACCAAGCCATGGTTTTAGCCTCCCATTCCGATTTGCCTTTTAATGAAAACGATTCTCAAGATATGGTCATTTACCATGTTCTAAACGAATCCATGTCTTCACAAAACCCCACCATCCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGTCCGCCGCCCCAATTCCCCTGCCGGAGGGGTTGCCAAGAAGCACTACAGAGGGGTCCGCCGCCGCCCCTGGGGCAAGTACGCGGCGGAGATACGTGACTCCACGCGACACGGCGCGCGCGTGTGGCTTGGCACCTTCGCCACCGCTGAAGAGGCTGCTTTGGCTTACGATAAAGCCGCTTTCAATATGAGAGGCTCCAAAGCCCTTTTGAATTTCCCGCCGGAGGTCGTGGCTGCGGCTGCGGCGGTGACGGCGACGGCTACTCCTCCGCCGTCGAATGCGAGTGGTGGTGGGTCGAGCACCGTGTCTATGGCGACTTCAAGAACAGAATCAGAATCTGATAAAAGTCTGTAA

mRNA sequence

ATGCGTTTGTGTTTAGCCACCAAAATCCCGTCTTCAAAATCGCCTCTAAAACACCAAGCCATGGTTTTAGCCTCCCATTCCGATTTGCCTTTTAATGAAAACGATTCTCAAGATATGGTCATTTACCATGTTCTAAACGAATCCATGTCTTCACAAAACCCCACCATCCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGTCCGCCGCCCCAATTCCCCTGCCGGAGGGGTTGCCAAGAAGCACTACAGAGGGGTCCGCCGCCGCCCCTGGGGCAAGTACGCGGCGGAGATACGTGACTCCACGCGACACGGCGCGCGCGTGTGGCTTGGCACCTTCGCCACCGCTGAAGAGGCTGCTTTGGCTTACGATAAAGCCGCTTTCAATATGAGAGGCTCCAAAGCCCTTTTGAATTTCCCGCCGGAGGTCGTGGCTGCGGCTGCGGCGGTGACGGCGACGGCTACTCCTCCGCCGTCGAATGCGAGTGGTGGTGGGTCGAGCACCGTGTCTATGGCGACTTCAAGAACAGAATCAGAATCTGATAAAAGTCTGTAA

Coding sequence (CDS)

ATGCGTTTGTGTTTAGCCACCAAAATCCCGTCTTCAAAATCGCCTCTAAAACACCAAGCCATGGTTTTAGCCTCCCATTCCGATTTGCCTTTTAATGAAAACGATTCTCAAGATATGGTCATTTACCATGTTCTAAACGAATCCATGTCTTCACAAAACCCCACCATCCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGTCCGCCGCCCCAATTCCCCTGCCGGAGGGGTTGCCAAGAAGCACTACAGAGGGGTCCGCCGCCGCCCCTGGGGCAAGTACGCGGCGGAGATACGTGACTCCACGCGACACGGCGCGCGCGTGTGGCTTGGCACCTTCGCCACCGCTGAAGAGGCTGCTTTGGCTTACGATAAAGCCGCTTTCAATATGAGAGGCTCCAAAGCCCTTTTGAATTTCCCGCCGGAGGTCGTGGCTGCGGCTGCGGCGGTGACGGCGACGGCTACTCCTCCGCCGTCGAATGCGAGTGGTGGTGGGTCGAGCACCGTGTCTATGGCGACTTCAAGAACAGAATCAGAATCTGATAAAAGTCTGTAA

Protein sequence

MRLCLATKIPSSKSPLKHQAMVLASHSDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSSSSSAAAVRRPNSPAGGVAKKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFPPEVVAAAAAVTATATPPPSNASGGGSSTVSMATSRTESESDKSL

Homology

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BLAST of Sed0023489 vs. NCBI nr
Match: XP_022926976.1 (pathogenesis-related genes transcriptional activator PTI5-like [Cucurbita moschata] >KAG7026542.1 Pathogenesis-related genes transcriptional activator PTI5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.8 bits (556), Expect = 3.9e-53
Identity = 127/160 (79.38%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 21  MVLASHSDLPFNENDSQDMVIYHVLNESMSSQN-PTIPSSSS-SSAAAVRRPNSPAGGVA 80
           MVLASHSDLPFNENDSQDMVIY VLN+ MSS N  T+PS+   ++ AA R  NS AGG+A
Sbjct: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60

Query: 81  KKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNF 140
           KKHYRGVRRRPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD+AAFNMRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120

Query: 141 PPEVVAAAAAV-TATATPPPSNASGGGSSTVSMATSRTES 178
           PPEVVAAAAA  T T TPPP   SG  SSTVSMATSR+ES
Sbjct: 121 PPEVVAAAAAADTTTTTPPP---SGSSSSTVSMATSRSES 157

[Close]

BLAST of Sed0023489 vs. NCBI nr
Match: KAG6594569.1 (Pathogenesis-related genes transcriptional activator PTI5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.0 bits (554), Expect = 6.7e-53
Identity = 127/162 (78.40%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 21  MVLASHSDLPFNENDSQDMVIYHVLNESMSSQN-PTIPSSSS-SSAAAVRRPNSPAGGVA 80
           MVLASHSDLPFNENDSQDMVIY VLN+ MSS N  T+PS+   ++ AA R  NS AGG+A
Sbjct: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60

Query: 81  KKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNF 140
           KKHYRGVRRRPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD+AAFNMRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120

Query: 141 PPEVVAAAAA---VTATATPPPSNASGGGSSTVSMATSRTES 178
           PPEVVAAAAA    T T TPPP   SG  SSTVSMATSR+ES
Sbjct: 121 PPEVVAAAAAAADTTTTTTPPP---SGSSSSTVSMATSRSES 159

[Close]

BLAST of Sed0023489 vs. NCBI nr
Match: XP_023003126.1 (pathogenesis-related genes transcriptional activator PTI5-like [Cucurbita maxima])

HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52
Identity = 124/159 (77.99%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 21  MVLASHSDLPFNENDSQDMVIYHVLNESMSSQN-PTIPSSSS-SSAAAVRRPNSPAGGVA 80
           MVLA HSDLPFNENDSQDMVIY VLN+ MSS N  T+PS+   ++ AA R  NS AGG+A
Sbjct: 1   MVLAPHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60

Query: 81  KKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNF 140
           KKHYRGVRRRPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD+AAFNMRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120

Query: 141 PPEVVAAAAAVTATATPPPSNASGGGSSTVSMATSRTES 178
           PPEVVAAAAA T T T PP   SG  SSTVS+ATSR+ES
Sbjct: 121 PPEVVAAAAAETTTTTTPP--PSGSSSSTVSIATSRSES 157

[Close]

BLAST of Sed0023489 vs. NCBI nr
Match: XP_023517162.1 (pathogenesis-related genes transcriptional activator PTI5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205.3 bits (521), Expect = 4.5e-49
Identity = 121/162 (74.69%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 21  MVLASHSDLPFNENDSQDMVIYHVLNESMSSQN-PTIPSSSS-SSAAAVRRPNSPAGGVA 80
           MVLASHSDLPFNENDSQDMVIY VLN+ MSS N  T+PS     + AA R  NS AGG+A
Sbjct: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSDDQPKTNAAPRHHNSAAGGIA 60

Query: 81  KKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNF 140
           KKHYRGVRRRPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD+AAFNMRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120

Query: 141 PPEVVAAAAAV-TATATPPPSNASGGGSSTVSMATSRTESES 180
           PPEVVAAAAA  T T TPPPS +S           SR+ESES
Sbjct: 121 PPEVVAAAAAAETTTTTPPPSGSS-----------SRSESES 151

[Close]

BLAST of Sed0023489 vs. NCBI nr
Match: XP_038881227.1 (pathogenesis-related genes transcriptional activator PTI5-like [Benincasa hispida])

HSP 1 Score: 205.3 bits (521), Expect = 4.5e-49
Identity = 126/172 (73.26%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 21  MVLASH--SDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSS----SSSAAAVRRPNSPA 80
           MVLASH  SDLPFNENDSQDMVIY VLN SMSS + T+P+++    +S+A A RR NSP 
Sbjct: 1   MVLASHTQSDLPFNENDSQDMVIYQVLNASMSSDS-TLPAAAADQPNSNANAPRRLNSPV 60

Query: 81  GGVAKKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKA 140
             +AKKHYRGVR+RPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYD AAFNMRGSKA
Sbjct: 61  RTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGSKA 120

Query: 141 LLNFPPEVVAAAAAVTATATP-PPS------NASGGGSSTVSMATSRTESES 180
           LLNFPPEVVAAAAA  AT    PPS        SG  SS +SMATSR+ES+S
Sbjct: 121 LLNFPPEVVAAAAAAAATTRNFPPSKRKLNAEPSGSSSSNISMATSRSESDS 171

[Close]

BLAST of Sed0023489 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 82/130 (63.08%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 21  MVLASHSDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSSS-SSAAAVRRPNSPAGGVAK 80
           MV    SDLP NENDSQ+MV+Y VLNE+ +   P +P  +       + RP    G    
Sbjct: 1   MVPTPQSDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPRNNILRPLQCIG---- 60

Query: 81  KHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFP 140
           K YRGVRRRPWGKYAAEIRDS RHGARVWLGTF TAEEAALAYD+AAF MRG+KALLNFP
Sbjct: 61  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 120

Query: 141 PEVVAAAAAV 150
            E+V A+ +V
Sbjct: 121 SEIVNASVSV 126

[Close]

BLAST of Sed0023489 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.9e-28
Identity = 70/122 (57.38%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 22  VLASHSDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSSSSSAAAVRRPNSPAGGVAKKH 81
           +L  ++ LPFN ND+QDM++Y+++ E  S +     +SSSS         S       K+
Sbjct: 9   LLFHYNSLPFNVNDTQDMLLYNLVAEGSSQET---VNSSSSYGIKEEEVTSYEEERKDKN 68

Query: 82  YRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFPPE 141
           YRGVR+RPWGKYAAEIRDSTR+G RVWLGTF  AEEAALAYD+AAF MRGS A+LNFP E
Sbjct: 69  YRGVRKRPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFPVE 127

Query: 142 VV 144
           +V
Sbjct: 129 IV 127

[Close]

BLAST of Sed0023489 vs. ExPASy Swiss-Prot
Match: O80337 (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 8.6e-27
Identity = 74/142 (52.11%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 25  SHSDLPFNENDSQDMVIYHVLNESM--------------SSQNPTIPSSSSSSAAAV--- 84
           S  DLP  ENDS+DM++Y +LN++                S  P++   +  S AAV   
Sbjct: 67  SWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSV 126

Query: 85  ------RRPNSPAGGVAK-KHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAAL 143
                   P S A   AK KHYRGVR+RPWGK+AAEIRD  ++GARVWLGTF TAE+AAL
Sbjct: 127 PVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAAL 186

[Close]

BLAST of Sed0023489 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 7.3e-26
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 24  ASHSDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSSSSSAAAVRRPNSPAGGVAKKHYR 83
           +++  LPFNENDS++M +Y ++ +  S+Q   I S S           S +   ++K YR
Sbjct: 31  SNNYSLPFNENDSEEMFLYGLIEQ--STQQTYIDSDSQDLPI-----KSVSSRKSEKSYR 90

Query: 84  GVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFPPEVV 143
           GVRRRPWGK+AAEIRDSTR+G RVWLGTF +AEEAALAYD+AAF+MRGS A+LNF  E V
Sbjct: 91  GVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERV 143

[Close]

BLAST of Sed0023489 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 64/118 (54.24%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 27  SDLPFNENDSQDMVIYHVLNESMSS-QNPTIPSSSS----SSAAAVRRPNSPAGGVAKKH 86
           SDLP + +DSQDM IY+ L +++SS   P++P  +S    +   A +   S A       
Sbjct: 32  SDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQ 91

Query: 87  YRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFP 140
           YRGVRRRPWGK+AAEIRD  ++GARVWLGT+ T E+AA+AYD+AAF +RGSKA LNFP
Sbjct: 92  YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

[Close]

BLAST of Sed0023489 vs. ExPASy TrEMBL
Match: A0A6J1EGD9 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita moschata OX=3662 GN=LOC111433931 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.9e-53
Identity = 127/160 (79.38%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 21  MVLASHSDLPFNENDSQDMVIYHVLNESMSSQN-PTIPSSSS-SSAAAVRRPNSPAGGVA 80
           MVLASHSDLPFNENDSQDMVIY VLN+ MSS N  T+PS+   ++ AA R  NS AGG+A
Sbjct: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60

Query: 81  KKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNF 140
           KKHYRGVRRRPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD+AAFNMRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120

Query: 141 PPEVVAAAAAV-TATATPPPSNASGGGSSTVSMATSRTES 178
           PPEVVAAAAA  T T TPPP   SG  SSTVSMATSR+ES
Sbjct: 121 PPEVVAAAAAADTTTTTPPP---SGSSSSTVSMATSRSES 157

[Close]

BLAST of Sed0023489 vs. ExPASy TrEMBL
Match: A0A6J1KN87 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita maxima OX=3661 GN=LOC111496832 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 124/159 (77.99%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 21  MVLASHSDLPFNENDSQDMVIYHVLNESMSSQN-PTIPSSSS-SSAAAVRRPNSPAGGVA 80
           MVLA HSDLPFNENDSQDMVIY VLN+ MSS N  T+PS+   ++ AA R  NS AGG+A
Sbjct: 1   MVLAPHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60

Query: 81  KKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNF 140
           KKHYRGVRRRPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD+AAFNMRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120

Query: 141 PPEVVAAAAAVTATATPPPSNASGGGSSTVSMATSRTES 178
           PPEVVAAAAA T T T PP   SG  SSTVS+ATSR+ES
Sbjct: 121 PPEVVAAAAAETTTTTTPP--PSGSSSSTVSIATSRSES 157

[Close]

BLAST of Sed0023489 vs. ExPASy TrEMBL
Match: A0A1S3AZ58 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo OX=3656 GN=LOC103484478 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.7e-47
Identity = 117/167 (70.06%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 21  MVLASH---SDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSSSSSAAAVRRPNSPAGGV 80
           MVL SH   + LPFNENDSQDMVIY VLN  MSS +   P+    +A + RR N PA  +
Sbjct: 1   MVLGSHTPQAGLPFNENDSQDMVIYQVLNSPMSSHSTLPPADDQPNANSSRRLNPPARTI 60

Query: 81  AKKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLN 140
           AKKHYRGVR+RPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYD AAF MRG KALLN
Sbjct: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLN 120

Query: 141 FPPEVVAAAAAVTATATPPPS----NAS--GGGSSTVSMATSRTESE 179
           FPPEVVAAAAA   T T PPS    NA   G  SST+S+ATSR+ES+
Sbjct: 121 FPPEVVAAAAAAKTTTTSPPSKRKPNAEPWGSSSSTISLATSRSESD 167

[Close]

BLAST of Sed0023489 vs. ExPASy TrEMBL
Match: A0A5D3CPS3 (Pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007900 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 118/168 (70.24%), Postives = 129/168 (76.79%), Query Frame = 0


Query: 21  MVLASH---SDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSSSSSAAAVRRPNSPAGGV 80
           MVL SH   +DLPFNENDSQDMVIY VLN  MSS +   P+    +A + RR N PA  +
Sbjct: 1   MVLGSHTPQADLPFNENDSQDMVIYQVLNSPMSSHSTLPPADDQPNANSSRRLNPPARTI 60

Query: 81  AKKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLN 140
           AKKHYRGVR+RPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYD AAF MRG KALLN
Sbjct: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLN 120

Query: 141 FPPEVVAAAAAVT-ATATPPPS----NAS--GGGSSTVSMATSRTESE 179
           FPPEVVAAAAA    T T PPS    NA   G  SST+S+ATSR+ES+
Sbjct: 121 FPPEVVAAAAAAAKTTTTSPPSKRKPNAEPWGSSSSTISLATSRSESD 168

[Close]

BLAST of Sed0023489 vs. ExPASy TrEMBL
Match: A0A0A0KKA5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518290 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 118/173 (68.21%), Postives = 133/173 (76.88%), Query Frame = 0


Query: 21  MVLASH--SDLPFNENDSQDMVIYHVLNESMSSQNPTIP-------SSSSSSAAAVRRPN 80
           MVL S+  SDLPFNENDS+DMVIY VLN  MSS + T+P       ++++++A A  R N
Sbjct: 1   MVLGSNAQSDLPFNENDSEDMVIYQVLNSPMSSHS-TLPAADDQPNANANANANASHRLN 60

Query: 81  SPAGGVAKKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRG 140
            PA  +AKKHYRGVR+RPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYD AAF MRG
Sbjct: 61  PPARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMRG 120

Query: 141 SKALLNFPPEVVAAAAAVTATATPPPSNAS------GGGSSTVSMATSRTESE 179
           SKALLNFPPEVVAAAAA   T T PPS         G  SST+S+ATSRTES+
Sbjct: 121 SKALLNFPPEVVAAAAAAKTTTTSPPSKRKPNVEPCGSSSSTISLATSRTESD 172

[Close]

BLAST of Sed0023489 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 121.7 bits (304), Expect = 6.1e-28
Identity = 74/142 (52.11%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 25  SHSDLPFNENDSQDMVIYHVLNESM--------------SSQNPTIPSSSSSSAAAV--- 84
           S  DLP  ENDS+DM++Y +LN++                S  P++   +  S AAV   
Sbjct: 67  SWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSV 126

Query: 85  ------RRPNSPAGGVAK-KHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAAL 143
                   P S A   AK KHYRGVR+RPWGK+AAEIRD  ++GARVWLGTF TAE+AAL
Sbjct: 127 PVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAAL 186

[Close]

BLAST of Sed0023489 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 118.6 bits (296), Expect = 5.2e-27
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 24  ASHSDLPFNENDSQDMVIYHVLNESMSSQNPTIPSSSSSSAAAVRRPNSPAGGVAKKHYR 83
           +++  LPFNENDS++M +Y ++ +  S+Q   I S S           S +   ++K YR
Sbjct: 31  SNNYSLPFNENDSEEMFLYGLIEQ--STQQTYIDSDSQDLPI-----KSVSSRKSEKSYR 90

Query: 84  GVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFPPEVV 143
           GVRRRPWGK+AAEIRDSTR+G RVWLGTF +AEEAALAYD+AAF+MRGS A+LNF  E V
Sbjct: 91  GVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERV 143

[Close]

BLAST of Sed0023489 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-26
Identity = 64/118 (54.24%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 27  SDLPFNENDSQDMVIYHVLNESMSS-QNPTIPSSSS----SSAAAVRRPNSPAGGVAKKH 86
           SDLP + +DSQDM IY+ L +++SS   P++P  +S    +   A +   S A       
Sbjct: 32  SDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQ 91

Query: 87  YRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFP 140
           YRGVRRRPWGK+AAEIRD  ++GARVWLGT+ T E+AA+AYD+AAF +RGSKA LNFP
Sbjct: 92  YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

[Close]

BLAST of Sed0023489 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 107.8 bits (268), Expect = 9.1e-24
Identity = 75/162 (46.30%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 25  SHSDLPFNENDSQDMVIYHVLNESM----SSQN-------PTIPSSSSSSAAAVRRPNSP 84
           S   LP  ENDS+DM++Y +L ++     SS +       P +    + +  A+      
Sbjct: 44  SWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKK 103

Query: 85  A-----GGVAKKHYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFN 144
           A       V  KHYRGVR+RPWGK+AAEIRD  ++GARVWLGTF TAE+AALAYD AAF 
Sbjct: 104 AIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFR 163

Query: 145 MRGSKALLNFPPEVVAAAA-AVTATATPPPSNASGGGSSTVS 170
           MRGS+ALLNFP  V +     V  T+    S++S   SST S
Sbjct: 164 MRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSS 205

[Close]

BLAST of Sed0023489 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 82  YRGVRRRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDKAAFNMRGSKALLNFPPE 141
           YRGVR+RPWGKYAAEIRDS RHGARVWLGTF TAE+AA AYD+AAF MRG +A+LNFP E
Sbjct: 14  YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73

The following BLAST results are available for this feature:

BLAST of Sed0023489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926976.1	3.9e-53	79.38	pathogenesis-related genes transcriptional activator PTI5-like [Cucurbita moscha...	[more]
KAG6594569.1	6.7e-53	78.40	Pathogenesis-related genes transcriptional activator PTI5, partial [Cucurbita ar...	[more]
XP_023003126.1	3.3e-52	77.99	pathogenesis-related genes transcriptional activator PTI5-like [Cucurbita maxima...	[more]
XP_023517162.1	4.5e-49	74.69	pathogenesis-related genes transcriptional activator PTI5-like [Cucurbita pepo s...	[more]
XP_038881227.1	4.5e-49	73.26	pathogenesis-related genes transcriptional activator PTI5-like [Benincasa hispid...	[more]

BLAST of Sed0023489 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04681	1.2e-33	63.08	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]
A0A3Q7I5Y9	5.9e-28	57.38	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
O80337	8.6e-27	52.11	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8LDC8	7.3e-26	55.83	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8L9K1	1.0e-24	54.24	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]

BLAST of Sed0023489 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGD9	1.9e-53	79.38	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita mosc...	[more]
A0A6J1KN87	1.6e-52	77.99	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita maxi...	[more]
A0A1S3AZ58	2.7e-47	70.06	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo O...	[more]
A0A5D3CPS3	7.8e-47	70.24	Pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo v...	[more]
A0A0A0KKA5	7.8e-47	68.21	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518290 PE=...	[more]

BLAST of Sed0023489 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17500.1	6.1e-28	52.11	ethylene responsive element binding factor 1	[more]
AT3G23240.1	5.2e-27	55.83	ethylene response factor 1	[more]
AT2G44840.1	7.5e-26	54.24	ethylene-responsive element binding factor 13	[more]
AT5G47220.1	9.1e-24	46.30	ethylene responsive element binding factor 2	[more]
AT3G23220.1	3.5e-23	81.67	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 82..93 score: 71.67 coord: 105..121 score: 71.44
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 81..145 e-value: 1.1E-36 score: 137.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 81..131 e-value: 6.1E-16 score: 58.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 81..139 score: 23.261465
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 80..139 e-value: 1.53209E-30 score: 104.276
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 80..140 e-value: 2.0E-27 score: 97.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..183
None	No IPR available	PANTHER	PTHR31190:SF173	PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5	coord: 18..161
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 18..161
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 81..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023489.1	Sed0023489.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity