Sed0023400 (gene) Chayote v1

Overview


Name	Sed0023400
Type	gene
Organism	Sechium edule (Chayote v1)
Description	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
Location	LG06: 44970074 .. 44982114 (-)
RNA-Seq Expression	Sed0023400
Synteny	Sed0023400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAGCCATTGTAAATGGAGGCATCAAAACAAGCACCAAAGGAAATGATGAAGCCTCTAAGCTCATTTGAGAAGAGAAAATGGGCCAAAATTGACAAAGACATTGCTCGTTCTCTCTTTTTTGTGCATGTCCTTTGTATTTTTGCACCATTTCACTTCACTTGGGGTGCATTTTGGGTTGCCTTTGCATTATATATCATCACCGGTCTTTTTGGTATCACTGTTTCCTATCATAGAAATCTTGCACATCGAAGTTTTAATCTTCCTAAATGGCTCGAATACACGTTCGCTTACTGTGGAGCTCATGCACTTCAGGTTCAAAGTTTTATATTAATAAGCATGTGATGGTTACTAAGTTAGTAGATAGATTATTTTAAGCATTGTGTTGAAATATCCTCAAATCGCTCTAAATGAAATAAGTTACGTGAAGATAATGGTTTGAGTTTTATGTTTTGAGCTTTATTGTTGAGTTTGTTCAAGAGAGTAATACTAAATCATCTCTAGGGCTTGTGTATTGTGTACTCTCATTTACATGCTTTTTTTTTTGCGAATGTAGCTAACATACTATAGTAAACCTTATAATTAAACCAATGTGTTGATTTTTAGTTTTCGTTATATTATTCTATGTTTGTCGATATTTGTTTATGTCAGTAACTTATTGTAATTTGGATTTTTTAAAAATTTCAATTTCAGGGTGATCCAATGGATTGGGTGAGTACACATAGATGTCACCATCGATTTGTCGATACAGAAAGAGACCCACATAGTCCTATTCAAGGATTTTGGTTTAGTCACATTACTTGGCTTCTTGATTCCAATCTCTTGACTAAAAAAGTTTGTCCAAATTTAAAAAAAATAGAAAGAAACATATTTATATTACATACAAAGAGAGGGAGACCAGAAAATGTTGGGGACTTGGAGAAGCAAGCATTCTATAGATTTATTCACAGAACATATTTTCTTCATCCAATGATTCTTGCAGTCATACTCTACACACTAGGGGGAGCTCCTTTTCTTATATGGGGAATGGTAAATTCTCTTTTTATTTGTTATTGCCATTTTAGAAAATAAGATATCAAGAAATTAAGGTTTTATAGTGGGTAAGGTTTGACCTCCATTTTTGTGGGAGTAAAATGTATATTTTTGTTAAAAAAAAGTTGGTAGGGATTTTGAGATTTAATTTTTTTTTTTTGAACACATAAAAAATATTTTATTTAGTTAAACAAACCATTAGTAAAAGATTGGACACTTAAAATCTTGATCATTAATCTATATTTTATGTTGGTTTCAAAAATCTTCCTTCTTTGTGAGAAGAATTCTCCATACTATTTTATAATTTTATAATTTTTCGTATATTGTTTTTTTTTAAAACGTGTAATTTTATGCAATAATCTACTTTTATGTTCAAATAAAACTATATGCTTAAATTAAGAATTCATGTAAGCTTTGGATTGTTGGTACGTTAGAAATCATCTGAAGAACATTAGTTTTAAAATAAGTTATATATATAACTACAGAATATACAAATGTAATGCATTATATTATGAGATAGGAGAATAAAAATTAAAGTAAAAAACATCCTCTTAAATGTGTACGAAAGAAATGTGTCTATTACATTATGAGATAGTAGAACCAAAATTAAAATTCTCTTACTATACAAAACTAAGAATGTACGTGGTAAAGAAACATCATTTTAAATGTGCACAAAAGAAATGTGTGACACATTTTAAATTATGTGTGCAGGGTGTAAGGATCATAGTGGTGATACATATAACATTTATGGTGAATTCAGTATGCCATATTTGGGGGAAGCGACAGTGGAAAACAAGAGATTTGTCAAGAAATAATTGGTAATAATTGATTTTTTTTGTCTTTCTTACTTTTCCATATTAACAAGATATAAATGAATAAATTGAGCTAAAGAGAGTTAGTTTGAGAAGTTATTTTGAGCAGTAAAAAATTGAGAGTTACATTAAAAAAATCTCGTTTAATTGATATTTTTTTTTAGTACAAAGTGGAGGAAGGGAGAATAACAAACTCTACATAGAGGGCACAACTACTCTAAAATAATATGAGCGCCAAATACCGATTTTTGGGCAGACAAGATAATTGAACTCATCACTTTCTGCACCCCAAGATCCTATTTGACCAATTGAGCCACCTTATAATGGTTACCTTATTGGATTTCTTTTTAAAAATAAATTATATGTTTTTATTCAATTCCTTATGCCTTAAATATTTCTTTTGAAGAATTTATTATTATTGAAAATTATTTAGTAAATTAAAAAGTTTCACTCCCATAATGAATAAATATAAGTTATAACGAGGCGTTAGAAAAATAAAAAGTAAAGGATTCAATTTATAATAGTCAACTATTTCGAAGAAAAAGAATTAACATATTTTTTTTATATGCGAGTATATATAGTAGGGTTAGACCCTACGTTCCATAACAATAGTCAAAATATGCCAAACTAACCTAAACAATAACAGTTATATAAAAAAGACCTGTAACTTATCGCCATTATATTAATTATGTTTTTCTCAACCTAAGAAAACCATAGGTAACTTAAATAATCTTCTTGACTTAAAAAAAAAAAACTTAAATAATCTGCTTCATTATGAAATAACTTTTTTTTAAATAAAAATTTTGTTTTGACTCAACTAATAATATTAAATAAATAAATATTATAAATTGTGATGTAGATTTAAACACACTTAGTATTTAAATACTAATTATTATAGAATTATATTGTACTATTTTGATAATAAATTTTCTTTGATTTTAGGTTGGTGGGAATAGTTTCATTTGGAGAAGGATGGCACAATAACCACCATGCCTTTGAATATTCAGCAAGACATGGAATTGAATGGTGGCAAATTGACTTTGGTTGGTATGTTATTATGTTTCTTCAAGCCATTGGTTTAGCCACTAATGTCAAAGTACCCTCTCAAGAGCACAAACAAAAGCTAGCAATTGATTACAAATAACCTGAAGATCAAAGCCTTAAAAGCTTCTCCTAATTTACTTACAAATGTTATACACTTATACATGGCTTGGAATGGAATAAAGTTATACTTCTATATAATAGTTCCTATAGGTTGGAAATGTAATCCAAATACATTATGTTATTGTATTATACTATATATTATGCAAAAGCTCTCAATTAACTTTCTACTGATATTAATAACAATGGGTTGAAGATTATAGCCTTTGCAAATTGATTTTTCCGAAAGATATGACTATCTTAAGTTTTTCATTTTACTAACAAAAGTGATCGAACCGCCAATGAACACTTCTAATTAAAATGACTAAACCAAAACTAATTAATTGAAATATATATAAATTAGTTAATTTTGTTTATTTGTTCAATATTTCCTAAATGGTCTATTATCACTACTAGAAAAAGCACATTCAATGACTATAATTTATAGTCATGAACACCTTCTATGACTAAAATCAAGAATCATTGTATCCGCTGTCACGGAAGGTTCAACCATGACACTATAGTAAAAGTGTCATGATAGAATCAATTATGACACTATATTATAGTCATTTATGAACGATTAATGATACATATATAGAGTCATTGATGAAGTAATAACGACAATTTCCAAGTGTCATCACAAAATTAGTTATGACATTTTATTATAGTCACGGTTGATCTATTATTGACACATATACATAGTCATGGTTGAACTATTTATGACATTTTATTTTAGTCGTGGTTGAACCATTAATGACACACATATATAGTCATTGAAGAAGTATTAATGACACGTTAATATTAACATTGTAGGTTATGTATTGACACTTTTTTATAGTCATCAATTTATGTAACATGACTGTTTATTTGTTTTCATGACACTTTTTTATACCTATTTACAACCTGTTTTGTTTGTGTCTTTACCTGTCAAGAAAAATTTATAATATGTAGCCCACAAATCTTATTCAACAAATCTTATTTCATATATAACTAAATAATTTGTACATTACACTTGAACGTTGAACAAAAAAAAATCAATATCAATAAATTTATAATTCTTAAAATGTTTACAAGGAGTTTGAAAACTAGAAAATTTGTTGAATAAGATTGAAAGCTACAATATAACAAATAAGCATGGTTTGTTATCCTATGTGCGAAGTATACGTGAATTGATAAGTTGCATGATAATTGTAAATGCAAGTGATCCCCACCTTGAACAAAGTACCTGCACAATGTGGTATTAAAGCTTTGAATTAGAAGTTGTAATAGAGAAAATAAAGTAACATAACTCATAACCTTACTCAGTGGTTAAAGACTAATGAAATATTATCTAAGATAAGTGTCTATGTTTCAAAAATATAACTATGCATGTCTCATACAAATCATAACCTATGCAATGAACTTAAACAACTTAGAAACTATTTCAATACATATGTGTTCTTGATACAATGAAATGTTTTAAAGATTAGATGGATATATATTGATAAAACTCAAGAGATCAAAGAAAGAAAGTTTCTTAATCGTCTAAACAACAACGAAAAAGTGCCAAGAGTATGAGAATTTTTTACCCACAAAGAAATGCCACCTCACATGGGGATCAAGAGCTTTTTTGGTCTTCGAATCATTTCATGCACAATACTTTCCCTTTATCATCTAGGATGGACCTTGTCCCACTCTCTACAATGCACACATAAGAATTATCTACTTATTTTAGTGTAACTTGCCAAGGCCCTACAATAATTAAAATGAATGAATAATAGATATAAGAAAATCATGATCAGATTAATCCAAAAAATAACATGAATGCAGACATCTGAATCCAATTCATTCTTTCAATCTAGGAGAAAACAATGAGAGACCACTATTTTCCAATGGTCCCACTAAGCAGTCAAAGCAAAACACTCAACAACAATTCCTTTAGGGCATTGTTCACCCATCATAACTGGAAGCTCTTTGCAACTGAATCCTCAGAGGAGTTGTTGGTCGTTTTCTTGTATTGTTTAAGTAAAGTATAGTTGTCGGTCATAAAAATAAAAAAAGGAGGAGATGTCTATCATGAAGAAAGGGGAAAAGCATACTAGCGTGGTTGCTCAAGTAGTCAGCAGTATGATCACAAACGAAGGCAGCAACACTGCTTTCATTGAAGTCTTTATAGAGTCATTGATGAAGTAATAACGACAATTTCCAAGTGTCATCACAAAATTAGTTATGACATTTTATTATAGTCACGGTTGATCTATTATTGACACATATACATAGTCATGGTTGAGCTATTTATGACATTTTATTTTAGTCGTGGTTGAACCATTTTATTTTAGAGAATAGAAGTCACAGCTCCAAAACAAACATTGCCAAAACAAGATAACGATGCAGAGAAGCCAGATTCAAACATTGTTTCTCAACTTACAAGAAACAACACCAATCAAACAAAAGAGACAAAATGGAAAATTGACTTCTTTAAAAAAAAAAAAAAGTCAAGCCATAAATGAAATTGAACAACAAAATGGAGATTGTGAACACGTCTGGTATTGAAAAGAAAATTGCCAAGTGCTAATTACAATACTACAATTTAAGCAGGATAAAAGAAAGAAAGAATAAAAAAATCAATCTAATACTAAATTGAACTGTCCAAATAGATGTCAAAGTTAAATCAACGAAATAAACACTCACTAAAGAAATGAAACCTACTATTTTTTCTAGTACTTAAACTATAGAACAAAGCAAGTAAAAGATGTTGCAGTCTAGCACTCTAATCACTTGTAGGCCTAAAATTCTTTAAAATGTCCTACAAGTAAAATTCAATTTGATTGGGGAGAAAAACGACTCGACAGAAGGTTGAACTCAAGTCCTCTTCTCTAATGTCATGATGAATTATGTTAAATCGCTAATCAATATAAAAGCTTAAACTTTTAAGTTGAGGTAAATTTAATTATATCAACCAACATATAATTATGTCAAGCCGATAAAGTTCACAAAAATTCTTTTCTAAGAAATATTGTAGTAGTGTTTTAGTCATTATATCAACCAACATGTAATATTACGTGCTTTATCTTCTTATTCATTTATTCACTATGCATAATATGTCATCCATATGACCCAATTGAGTCTAAATCGCCCTTACCTGTTATCATCTGCATCTCCAAATAAGAATTCAACTTGTATACCGCACACGTTCAATACAAATATTGCTAACTTTTCCTTCAACTCTGCCTTCATAACAAAGAAACAAAAGTGAATCCTTAAACCTATTAGAAGCGTGAGAAAGGACAAAAATAAAAGCAATTATTCAACCACACACTCATAAAAGCAACAATTCGTCTCTCTCGTTCAATCAACCAACTTTGCAAGGAAAACAAAATGACAGAAACAATAATTTGAAACATAAAAAAGAAAGTTTCTAGTCTACATAAGTACTAAACTAAGTCATCACAACATCAAGGTGTTGAAAAAACCCTCCATAAAGTTAATTGTCCTCATAATTACTTTGATAAGTAATTATAAACAATCTCCACCCAAATCGATGATAATAATATCAACCATTCCAAAATTCTCAAACAATTCCAAAAGAATCTATAGCATAAAGACCAGGACCACATAATTCCATTAAGTTTACAAATTCAGACCCAATATTTCCTTTGAAACAATGTCAAAATAATGCAAAAAAAGCATCAAAGATGGCCCATTTCTTCAACAAAAGTAGTGAAAAGGCATTGGACAGAAATCCTCAGCTATGATTTGTATTGCAATTAGGGCTTGTGGGTAGGGGTGAATAGAGCGAAAAGAGATTGAAACTCAATAAAATTTACAAAAACCCTCGAGAAAATATGTGTTAAAAAACCAAATACAATTTATAAAAAAAAAACTCATTTAACAATCAATCCTAAACAAAGCATTCCCAAACCTGATAGCCGAAGGAAGAGATCCTCCATTGTGGGAAATAGGTTCTACCGCCCTCTTAACGTTGGAAACAATAGAAGCTCTGCCAAAGAAGAAGATGAAAACGACCGACTAAAGAGATCGCACAAGGAAAATCCTTTGCCTTCAATATCCGGCCGCAACCACTATGCTTATCCTTGCCAGCGGAACCCCACTTCTGAAATTGAGCCCTAGCTCTAATTCAACGTCAACCTCACTAGAGAATGAAAGATTAAATTTTAAAAAAAATCTAGGGTTAGGAAGGTGATGGAAAAATTTCATATGGTGGGAAATGAGAGGATGTGTTTCTGCTTCAAAACGAAGAAGAATGCGAAAAAGATAAAAAATATTTTCCGTTTTTGTAGGGTTTTTTTTAATAAAAATAAGGTGTCCCTTACGGTTTGAACGCATAACCTTTTAAATGCACATTTAATGACTCTAAAAAAAGATATTTCCATTTTTTCTTACACGCCTTTTTTTTCTCTCTTTTAATGACACTTATTTTGCATTCTCTCTTACAAAATAAATTTGCACAGTGTCATAGTGTCATAGTAGGTGCTTTTTCTAGTAGTGTATGTAATGTAAATTAGAAAGGCATAATTACACACAAAATTAGTCAACCCATTGCTATAATCTTCAATCACTTGAAGCAATTACAGAACAAAAATTCTTGGATATATACGATAATAATATTAATTACACACAAAATAAGTCAACCCATTGCTATAATTTTTTTTTTTTTTTGAAAAACAGTTCTAGATTTTTCCTGATGGATGTTTTATTTGGCTCATATTTTGTATAGGATTATCTTAGTGAAATATTAATCTCAATTTATAACAAAATTATTAAGATAAATCAAATATTTCTAGTACAGTCTTCATGTTTCTACATGAATGATCTAAATTGAATCATATACAACGCTTGAAAGTGGGTCGGTATCTTTAGTGTTACCAAGACACCTAACCTTAGTCCATATATTATAGTAAACTTTAGGTTATTGAATAAATAAAGATCAATCCATATGTCTACTACATACTATTAAAGTTTTTATATTAATAATCTTTAGTTTCATTACCATTAATTTGATTAATGTGTTCGGTTTGGATAATGCAAAGAAACTAATAATTTAAATAAAATACTAAGTATTCTTTATTGATTTACAATCGATATAATAAATGTTCTTTAATAATAAATTATTAAGCTTTTAGAGCACAAACTCTACTATACGAGTGGCAGCATTTGTGGTGAGTTTTGATGCGCAGCGATCGTCGATGGTAGCATAGGTGTTTGGCATGCGATAACAACCTCGTGGATCGACGAGTGACCGTGGTTGATCGACAGAGGAGCATGATGGCTGAAGCTTGGAAGGAAATAGTGTGATGGAAATGAAAGGTTGGAAAAATGAGATCAGTTATGTCCTCTATACAAAGTTTCTCGATCTCCTTCCTCTAATTTATATTAAAAATAAAAAATTGAAGAGAGGAAAGAGATCAGAAGGTGGTGTACGGTATTTGAGGTAGAAGGGGATAGAAGATCTGATTTTTTTTTTTTTTTAGTGTGAAGATTTTATTTGCTTCTTGTCAAAAAAAAGTTTTCCATTTTTTTTAAAAGCAATAATCCTTTCATTTTAAAAATCCGATTGAGCTACCAATGAAATTTTACCTTTCAATCTCAACAGAAAAAAAAAAAAAAAAAAAAAACAAGCACTTTAGCCCCCGTTTGATAACCATTTGGTTTTTTTATTTTTTGTTTATGAAATTTAAGCTTATTTCTACCCAAATTTCCTACCATATGCTCCAGCTTTCCTACAATGTATCCATATTTTCTTAACATAGTAGGTGAATACTAACCAAATTTCAAAAACAAAAACAAGCTTTTTTGGAAGCTACTTTTTTTTTGTTTTCAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGATGTAGATTTCCAAATAAAGAAAAAAGTATAGTAATATAGTCGTTGTAGGCTTAAATTTCATTAACAAAAAACGAAAAACAAAATGTTTATCAAACAAGGCCTTAATATTTACCTTGGATTTTCGCAGCCATTTAAATTAAGAGTATGCAAAAGAATATGGTCATTCAAACTTTTTAACCCAAACAATAAGGATTAGGTTGAAATATAGTTTTATTTAAACTAAGTTGAATCATAATTTTATAATTTTTGTTGGGTTGAGTTGGTTCTAGGGTTGACCATATTTTGGCTCGTTCAATCCAACTCAGCCTTATCTAAAGAATAATATAATATGTGTGTATGATAAAAAAAATTAATTAATAAGAGAAGTTTTTAGTATATTGACGATAAATAACATGCACTAATACGATAGGTAATCTAGGTTGAGAAAATAATCCATATTTTATTTATTTATTTATATATTTACGAGGTATGAAAGTAGTTTTTTTTATAGAGAAAATAAGATATTAATACAACCAAAAAATCCAATCCAACCTAACAATATAGGGTTAAGTTGCTTTAAAGCGTAAAGTTTACATTGAAAATTGACCAATACAAAATTTTAAATTGGTCCAAAAAAATCAGCTTCCTTCAAATTTAATAAGTAAAAACCTAGGCCATTTAAACTTTTGAATTTAAATTCTTCCAATAAATTCAAAATATACTTAAAAGTTACTGAAATGGTCGGTGGTACGATAATTTATTATTTGAAGGTAATCTAGTTCAACACTACATTATAATTTGATTTTGAAAATCAGTATTTAGTTCTCATTTAATTAAAAACAGTTATATCCTCTATGTAGCGTTTGTTGTCCTCCTTCCAGATATTTTTTATAATGTCACAATTAACTGAATTAATTACATAAACATTTCATCAATTAGTAAAAATTTGGGGGCGTTAGATGAGGTATTAGACTTTCATGATATACCTAAATTTTGTGGATGCAATTAATGATGTGAACTTTTTTCAAAAAAAAAAAAAAGAAAAATTAATGAGCTAAATTTTTTTAGTTGGGAGAGCATTAATTATTATTATTATTATAAAAAAAATACTATTTCATTTAAGAGAGGCATGCAAGATGTTTTTTTAGTTGGGAGAGCACTAAAGTTAGTACCTTCAAAGCTGAAAAATGCACTATAAATACACATATGCTAAGGAAAGTGGAAATAAACTTAGCCTTAACTAAAGCAAGTCTTTGTAAATGGAGGGTTCAAAAAAAGAACCAAAGGAAATGATGAAGCCTCTAGGCTCATTTGAGAAGAGAAAATGGGCCTAGATTGACAAAGACATTGCTAGTTCTCTTTTCTTTGTGCACTTCCTTTGCATTTTTGCACCCTTTCACTTCACTTGGGGTGCATTTTGGGTTGCCTTTTCATTATACATCATCACCGGTCTCTTCGGTATTACTATTTTCTACCATAGAAATCTTGCGCATTGAAGTTTTAATCTTCCAAAATGGTTTGAATACACGTTTGCTTATTGTGAAGCTCATGCATTTCAGGTATGATTACAAGTTATTGGTTATAATAATCTAACCCAGGTTTGCCCCACCCTTTATTATAGTCGGTGGTTACCTAAACATGTGTGCCCGTTTATCTAAACCTTACATATATTATTTTTGTTACAATAACCAGTCTTTCAAACACAGTTTATCATAACTCCTATTATAATAACCTGTCTCCTCAAACACTGTTTATAATAATCCACCACTTATCATAACCCACCATTTATCATAACCTTCCGTCTATTATAACCAAATCGATGCACCAAATACACCCTGAGATATTAACAAAAAAAAATCATCTTATCACCTATTTCTTATTGTGTAATTTGTACTATTCCCTATGCACATACGTGGGCATGGCTAACAGACGATTAGTGAATTGTATAAATTTGTGCGTTAATTTTTTTTGTTATTTTACTTTTAATTTCTCGATATTCATTCATATTATATCAAATTTTAATTTGAAACTTTTCAACTTTTTATTCAGAGTGATCCGTTAGATTGGGTGAGCACACACAGATGCCACCATCGATTTGTGGATACTGAAAGAGACCCACATAGTCCTATACAAGGATTTTTGTTTAGTCACATTACTTGGCTTCTTGATTCCCATGTTTTGACTAAAAGAGTTTGTCCCAACTTTAAGGAAATGGAAAGGAACATATTTGTATTGTTAACAAAGAGTGGGAGACCAGAAAATGTTGGGGACTTGGAGAAGCAAGCATTCTATAGATTTATTCACAAAACATATTATCTTCATCCAATAACTCTTTCAGTCATCCTCTACACACTAGGGGGAACTCCTTTTCTTATATGGGGAATGGTAAAATAAATTTTTTATTTTTATTTTTTATTTTCATTTTGGAAAATAGAACATTTAGAAACTAGGATTTCATTTTAACTAAAGTTTGACCTCAATTTTTGTGGGAGTAAAGTTTGATAAATGCCAACTTTTGATAATTTCTTTTGAAGAATTTATAATTATTGAAAATTATTTAGTAGTTTAAAATTTTAAGTTTTATAAATATAAGTTATCTTAAATGATTAATCCATCATAACTTTTATTAAAATGTCAAAATTTTAAACTTCAGGTTCGTTAATTAATTCAACTCAATGTTAGGCTTTTAGATGGTAGATTCATGTCTTCTAAATTAGAAAGTGCTTTTCTGACCCTAAAGAAAATATATGTAGCTTAAATGATCTTCTTCACAACTTATATATCTTAAAAAAAAAGTAGAGGTTTGACCTAAACAAATATATATTAGAATTGGCATATAGATTTAATTATATTTGAAATTCCAACTAACACCATGCTATTGGGATACTATTCTTTTGATGTAGGTTTAAACACACTTACTATTTAAATACTAATTAATTATTATAGCATTATATTGTACTATTTTGATGATAAATTTTCTTTGATTTTAGGTTGGTGGGAATAGTTTCATTTGGAGAAGGATGGCACAATAACCACCATGCCTTTGAATATTCAGCAAGACATGGAATTGAATGGTGGCAAATTGACTTTGGTTGGTATGTTATTATGTTTCTTCAAGCCATTGGTTTAGCCACTAATGTCAAAGTACCCTCTCAAGAGCACAAACAAAAGTTGGGAATTGATTGCAAATTACCTGAAGATCAAAACCTTAAAAGTTTATCCTAA

mRNA sequence

GCAAGCCATTGTAAATGGAGGCATCAAAACAAGCACCAAAGGAAATGATGAAGCCTCTAAGCTCATTTGAGAAGAGAAAATGGGCCAAAATTGACAAAGACATTGCTCGTTCTCTCTTTTTTGTGCATGTCCTTTGTATTTTTGCACCATTTCACTTCACTTGGGGTGCATTTTGGGTTGCCTTTGCATTATATATCATCACCGGTCTTTTTGGTATCACTGTTTCCTATCATAGAAATCTTGCACATCGAAGTTTTAATCTTCCTAAATGGCTCGAATACACGTTCGCTTACTGTGGAGCTCATGCACTTCAGGGTGATCCAATGGATTGGGTGAGTACACATAGATGTCACCATCGATTTGTCGATACAGAAAGAGACCCACATAGTCCTATTCAAGGATTTTGGTTTAGTCACATTACTTGGCTTCTTGATTCCAATCTCTTGACTAAAAAAGTTTGTCCAAATTTAAAAAAAATAGAAAGAAACATATTTATATTACATACAAAGAGAGGGAGACCAGAAAATGTTGGGGACTTGGAGAAGCAAGCATTCTATAGATTTATTCACAGAACATATTTTCTTCATCCAATGATTCTTGCAGTCATACTCTACACACTAGGGGGAGCTCCTTTTCTTATATGGGGAATGGGTGTAAGGATCATAGTGGTGATACATATAACATTTATGGTGAATTCAGTATGCCATATTTGGGGGAAGCGACAGTGGAAAACAAGAGATTTGTCAAGAAATAATTGGTTGGTGGGAATAGTTTCATTTGGAGAAGGATGGCACAATAACCACCATGCCTTTGAATATTCAGCAAGACATGGAATTGAATGGTGGCAAATTGACTTTGGTTGGTATGTTATTATGTTTCTTCAAGCCATTGGTTTAGCCACTAATGTCAAAGTACCCTCTCAAGAGCACAAACAAAAGTTGGGAATTGATTGCAAATTACCTGAAGATCAAAACCTTAAAAGTTTATCCTAA

Coding sequence (CDS)

ATGGAGGCATCAAAACAAGCACCAAAGGAAATGATGAAGCCTCTAAGCTCATTTGAGAAGAGAAAATGGGCCAAAATTGACAAAGACATTGCTCGTTCTCTCTTTTTTGTGCATGTCCTTTGTATTTTTGCACCATTTCACTTCACTTGGGGTGCATTTTGGGTTGCCTTTGCATTATATATCATCACCGGTCTTTTTGGTATCACTGTTTCCTATCATAGAAATCTTGCACATCGAAGTTTTAATCTTCCTAAATGGCTCGAATACACGTTCGCTTACTGTGGAGCTCATGCACTTCAGGGTGATCCAATGGATTGGGTGAGTACACATAGATGTCACCATCGATTTGTCGATACAGAAAGAGACCCACATAGTCCTATTCAAGGATTTTGGTTTAGTCACATTACTTGGCTTCTTGATTCCAATCTCTTGACTAAAAAAGTTTGTCCAAATTTAAAAAAAATAGAAAGAAACATATTTATATTACATACAAAGAGAGGGAGACCAGAAAATGTTGGGGACTTGGAGAAGCAAGCATTCTATAGATTTATTCACAGAACATATTTTCTTCATCCAATGATTCTTGCAGTCATACTCTACACACTAGGGGGAGCTCCTTTTCTTATATGGGGAATGGGTGTAAGGATCATAGTGGTGATACATATAACATTTATGGTGAATTCAGTATGCCATATTTGGGGGAAGCGACAGTGGAAAACAAGAGATTTGTCAAGAAATAATTGGTTGGTGGGAATAGTTTCATTTGGAGAAGGATGGCACAATAACCACCATGCCTTTGAATATTCAGCAAGACATGGAATTGAATGGTGGCAAATTGACTTTGGTTGGTATGTTATTATGTTTCTTCAAGCCATTGGTTTAGCCACTAATGTCAAAGTACCCTCTCAAGAGCACAAACAAAAGTTGGGAATTGATTGCAAATTACCTGAAGATCAAAACCTTAAAAGTTTATCCTAA

Protein sequence

MEASKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSPIQGFWFSHITWLLDSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQEHKQKLGIDCKLPEDQNLKSLS

Homology

[Close]

BLAST of Sed0023400 vs. NCBI nr
Match: XP_022153632.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia] >XP_022153633.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia])

HSP 1 Score: 552.0 bits (1421), Expect = 3.5e-153
Identity = 250/317 (78.86%), Postives = 281/317 (88.64%), Query Frame = 0


Query: 1   MEASKQAPKEMMKPLSSFEKR-KWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFAL 60
           MEA KQ PKEM  P  SF KR KW K+DKD+A SLFFVH+L +FAPF+F W AFW+AFAL
Sbjct: 21  MEAPKQEPKEMAIPPKSFGKRKKWTKLDKDVACSLFFVHLLSMFAPFYFNWRAFWIAFAL 80

Query: 61  YIITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDT 120
           Y+ TGLFGI+VSYHRNLAH+SF LPKWLEY FAYCGAHALQGDP+DWV+THRCHHRFVDT
Sbjct: 81  YVATGLFGISVSYHRNLAHKSFTLPKWLEYLFAYCGAHALQGDPIDWVNTHRCHHRFVDT 140

Query: 121 ERDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDL 180
           ERDPHSPIQGFWFSHITWLLDS  LTK+VCP    + +K+ERNIF++ +K GRP+NVGDL
Sbjct: 141 ERDPHSPIQGFWFSHITWLLDSYSLTKRVCPKYFTDFQKVERNIFVMFSKHGRPDNVGDL 200

Query: 181 EKQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGK 240
           EKQ FYRFIH+TYFLHP+ILA+ILY  GGAPFLIWGMGVRI+VV+HIT M+NSVCHIWGK
Sbjct: 201 EKQTFYRFIHKTYFLHPIILAIILYAYGGAPFLIWGMGVRIVVVLHITCMINSVCHIWGK 260

Query: 241 RQWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLA 300
           + W+T DLSRNNW V +VSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYV+MFL+AIG+A
Sbjct: 261 QPWRTGDLSRNNWWVSLVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVVMFLEAIGIA 320

Query: 301 TNVKVPSQEHKQKLGID 313
           TNVKVPSQ  KQKL ID
Sbjct: 321 TNVKVPSQNQKQKLAID 337

[Close]

BLAST of Sed0023400 vs. NCBI nr
Match: XP_022153644.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia])

HSP 1 Score: 528.1 bits (1359), Expect = 5.4e-146
Identity = 233/311 (74.92%), Postives = 269/311 (86.50%), Query Frame = 0


Query: 1   MEASKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALY 60
           MEASKQ PKEMMKP   +E+RKW K+DKDIA SLF VH+LCI APF F W AFWVAF LY
Sbjct: 1   MEASKQEPKEMMKPPRPYERRKWTKLDKDIACSLFLVHLLCILAPFQFNWSAFWVAFVLY 60

Query: 61  IITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTE 120
           I+TGLFG+T+SYHRNLAH+SF LPKWLEY FAYCG  ALQGDPMDWVSTHRCHH+FVDTE
Sbjct: 61  IVTGLFGMTLSYHRNLAHKSFKLPKWLEYLFAYCGVQALQGDPMDWVSTHRCHHQFVDTE 120

Query: 121 RDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDLE 180
           RDPHSPI+GFWFSHI WL DS  LTKKVCP    N +K+ERNIF+L +K G+PENV DLE
Sbjct: 121 RDPHSPIRGFWFSHILWLFDSYNLTKKVCPKYFSNFQKLERNIFVLFSKHGKPENVADLE 180

Query: 181 KQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKR 240
           KQAFYRFIH+TY LHP++LAVILY +GG PFL+WGM VRI+VV+H T MVNSVCHIWGK+
Sbjct: 181 KQAFYRFIHQTYLLHPIVLAVILYVVGGIPFLVWGMAVRIVVVLHFTLMVNSVCHIWGKQ 240

Query: 241 QWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLAT 300
            W T D+S+NNW V +++FGEGWHNNHHAFEYSA+ G+EWWQ+DFGWY+I+FLQAIG+AT
Sbjct: 241 SWTTGDMSKNNWWVSLITFGEGWHNNHHAFEYSAKFGLEWWQLDFGWYMILFLQAIGVAT 300

Query: 301 NVKVPSQEHKQ 308
           +VK+PSQ H Q
Sbjct: 301 HVKLPSQSHMQ 311

[Close]

BLAST of Sed0023400 vs. NCBI nr
Match: XP_011652978.2 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus] >KAE8649060.1 hypothetical protein Csa_015380 [Cucumis sativus])

HSP 1 Score: 526.6 bits (1355), Expect = 1.6e-145
Identity = 240/318 (75.47%), Postives = 278/318 (87.42%), Query Frame = 0


Query: 1   MEASKQAPKEM-MKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFAL 60
           ME SK   K+M +KPL SF K+KWAKI++ +A SL FVH+LCIFAPFHF W AFWVAF L
Sbjct: 1   MEGSKLEQKDMAVKPLRSFRKKKWAKINRSVAGSLLFVHLLCIFAPFHFNWSAFWVAFVL 60

Query: 61  YIITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDT 120
           Y+ITGLFGI+VSYHRNLAHRSFNLPKWLEY FAYCG HALQGDP+ WV  HRCHHRFVDT
Sbjct: 61  YVITGLFGISVSYHRNLAHRSFNLPKWLEYLFAYCGVHALQGDPIGWVKIHRCHHRFVDT 120

Query: 121 ERDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPE-NVGD 180
           E+DPHSPIQGF FSH+TWLLDS +LT+KV P    + +KIERN+ +++ K+GRPE NVGD
Sbjct: 121 EKDPHSPIQGFLFSHVTWLLDSYVLTEKVGPKYFDDYEKIERNVVMVNMKQGRPENNVGD 180

Query: 181 LEKQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWG 240
           LEKQAFYRF+ +TYFLH ++LAV+LY +GG PFLIWGMGVRI+VV+HITFMVNSVCHIWG
Sbjct: 181 LEKQAFYRFLRKTYFLHLLLLAVLLYAMGGVPFLIWGMGVRIVVVLHITFMVNSVCHIWG 240

Query: 241 KRQWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGL 300
           K+ WKT DLS NNWLVG++ FGEGWHNNHHAFEYSARHG+EWW+IDFGWYVIMFLQAIG+
Sbjct: 241 KQLWKTNDLSTNNWLVGLLGFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVIMFLQAIGV 300

Query: 301 ATNVKVPSQEHKQKLGID 313
           AT+VKVP Q HK+KL +D
Sbjct: 301 ATHVKVPLQHHKKKLAMD 318

[Close]

BLAST of Sed0023400 vs. NCBI nr
Match: XP_038903746.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-138
Identity = 223/322 (69.25%), Postives = 267/322 (82.92%), Query Frame = 0


Query: 1   MEASKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALY 60
           M+ SKQ P E++KPL+ FE+ KW  IDK  A  +FF+H+ CIF PF FTWGAFWVAF LY
Sbjct: 1   MDVSKQEPSELVKPLTPFERGKWNNIDKTTAFVIFFIHIPCIFGPFQFTWGAFWVAFVLY 60

Query: 61  IITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTE 120
           +ITGLFGIT+SYHR+L+H+SF LPKWLEY FAYCG HALQGDPMDWVSTHRCHH+FVDTE
Sbjct: 61  VITGLFGITISYHRHLSHKSFKLPKWLEYLFAYCGVHALQGDPMDWVSTHRCHHQFVDTE 120

Query: 121 RDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDLE 180
           +DPHSPI+GFWFSHI W LDS LLTKKVCP    + K +ERN+ +L+ K GRP NV DLE
Sbjct: 121 KDPHSPIEGFWFSHIAWTLDSYLLTKKVCPKYFRDFKGMERNMLMLNLKHGRPTNVVDLE 180

Query: 181 KQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKR 240
           KQ+FYRFI +TYFLHP+ LAV+LY +GG PF+IWGM VR+ + +H+ FMVNS+ H WG R
Sbjct: 181 KQSFYRFIQKTYFLHPIALAVVLYAIGGIPFVIWGMFVRVTMFVHVMFMVNSIGHRWGTR 240

Query: 241 QWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLAT 300
           QW T DLS NNW + ++SFG+GWHNNHHAFEYSARHG+EWWQIDF WYVIMFLQAIG+AT
Sbjct: 241 QWNTSDLSTNNWWLSLLSFGDGWHNNHHAFEYSARHGLEWWQIDFSWYVIMFLQAIGVAT 300

Query: 301 NVKVPSQEHKQKLGIDCKLPED 319
            VK+P+Q HK++L +  KL +D
Sbjct: 301 EVKLPTQSHKERLAMH-KLKDD 321

[Close]

BLAST of Sed0023400 vs. NCBI nr
Match: XP_022979557.1 (delta-9 acyl-lipid desaturase 1-like [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 2.1e-137
Identity = 228/325 (70.15%), Postives = 266/325 (81.85%), Query Frame = 0


Query: 2   EASKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYI 61
           +ASKQ PKEM+KP  SF +RKW K+DK +A  +  +H+LCIFAPFHFTW AF VA  L I
Sbjct: 19  DASKQEPKEMVKPPRSFWRRKWTKLDKRVAHVILLLHLLCIFAPFHFTWPAFRVAVTLQI 78

Query: 62  ITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTER 121
           ITGLFG+T+SYHRNLAH+SF +PKWLEY FAYCG HALQGDP+DWVSTHRCHH+FVDTER
Sbjct: 79  ITGLFGMTISYHRNLAHKSFQIPKWLEYLFAYCGVHALQGDPIDWVSTHRCHHQFVDTER 138

Query: 122 DPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDLEK 181
           DPHSPIQGFW SHI WL DS  LT KV P    NL+KIE+N+F+  +K  +PENVGDLE+
Sbjct: 139 DPHSPIQGFWMSHIMWLFDSYTLTDKVSPKYSSNLQKIEKNMFVYFSKYRKPENVGDLER 198

Query: 182 QAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQ 241
           Q FYRFIH+TY LHP+ LA ILYT+GG PFLIWGM VRI+V+ H TFMVNSVCH+WG++ 
Sbjct: 199 QTFYRFIHKTYLLHPIALAAILYTVGGVPFLIWGMCVRIVVIFHSTFMVNSVCHMWGQQH 258

Query: 242 WKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATN 301
           W+T DLSRNNW VG+ SFGEGWHNNHHAF+YSAR G+EWWQ+D GWYVI FLQ IGLAT+
Sbjct: 259 WRTGDLSRNNWWVGLTSFGEGWHNNHHAFKYSARLGLEWWQLDAGWYVIRFLQVIGLATD 318

Query: 302 VKVPSQEHKQKLGIDCKLPEDQNLK 323
           VK+PS  H Q L ++   PED  LK
Sbjct: 319 VKLPSPAHMQALALN--KPEDHLLK 341

[Close]

BLAST of Sed0023400 vs. ExPASy Swiss-Prot
Match: Q949X0 (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3 PE=1 SV=2)

HSP 1 Score: 399.1 bits (1024), Expect = 4.9e-110
Identity = 172/290 (59.31%), Postives = 219/290 (75.52%), Query Frame = 0


Query: 20  KRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIITGLFGITVSYHRNLAHR 79
           +R+W  +D      +  +H+L + APF F W A  VAF LYI+TGL GIT+S+HRNL+H+
Sbjct: 95  EREWKAMDFGAVAVVLSMHLLSLLAPFQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHK 154

Query: 80  SFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSPIQGFWFSHITWLL 139
           +F LPKWLEY FAYCGA ALQG+P+DWVSTHR HH+F D++RDPHSP+ GFWFSH+ W+ 
Sbjct: 155 AFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMF 214

Query: 140 DSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHRTYFLHPMILAVIL 199
           D+N +T++                   G P NVGDLEKQ FYRF+  TY LHP+ LAV L
Sbjct: 215 DTNTITQRC------------------GEPNNVGDLEKQPFYRFLRTTYILHPLALAVAL 274

Query: 200 YTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWLVGIVSFGEGW 259
           Y +GG PF++WGMGVRI+ V HIT++VNS CH+WGK+ W T DLS+NNW V  ++FGEGW
Sbjct: 275 YAMGGFPFIVWGMGVRIVWVYHITWLVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGW 334

Query: 260 HNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQEHKQKL 310
           HNNHHAFE+SARHG+EWWQ+D  WYV+ FLQAIGLAT+VK+PS+  KQ++
Sbjct: 335 HNNHHAFEFSARHGLEWWQLDMTWYVVKFLQAIGLATDVKLPSEAQKQRM 366

[Close]

BLAST of Sed0023400 vs. ExPASy Swiss-Prot
Match: P0DOW2 (Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 6.1e-100
Identity = 164/289 (56.75%), Postives = 204/289 (70.59%), Query Frame = 0


Query: 21  RKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIITGLFGITVSYHRNLAHRS 80
           RKW   D      +  +HVLC+FAP  F+W +FWV FALY I G+FG T+S+HRNL HRS
Sbjct: 38  RKWNSTDVFHILFIGGLHVLCLFAPSTFSWKSFWVCFALYAICGVFGTTLSFHRNLTHRS 97

Query: 81  FNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSPIQGFWFSHITWLLD 140
           F LPK+LEY FAY G HALQGDP+ WVSTHR HH++ DT  DPHSPI+GFWF HI WL D
Sbjct: 98  FKLPKYLEYFFAYVGLHALQGDPVWWVSTHRYHHKYTDTYLDPHSPIEGFWFCHIFWLFD 157

Query: 141 SNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHRTYFLHPMILAVILY 200
           S  + +K                   GR EN GDL KQ++YRF+ RT+  H  + A +LY
Sbjct: 158 SKYIIEKC------------------GRYENAGDLMKQSYYRFLERTFVYHVYLQAALLY 217

Query: 201 TLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWLVGIVSFGEGWH 260
             GG PF++WGM VR I+  H++++VNSVCH WG R W T DLS NNW + +++ GEGWH
Sbjct: 218 LFGGFPFIVWGMAVRTILGFHLSWLVNSVCHRWGNRPWNTGDLSTNNWFIAMLTSGEGWH 277

Query: 261 NNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQEHKQKL 310
           NNHHAFEYSARHGIEWWQID  WY+I  L+ +GLAT++KVPS+ HK+K+
Sbjct: 278 NNHHAFEYSARHGIEWWQIDTTWYIIKLLEYLGLATDIKVPSEIHKRKM 308

[Close]

BLAST of Sed0023400 vs. ExPASy Swiss-Prot
Match: P0DOW3 (Acyl-CoA 5-desaturase AL21 OS=Anemone leveillei OX=212809 GN=AL21 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.3e-97
Identity = 158/273 (57.88%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 37  VHVLCIFAPFHFTWGAFWVAFALYIITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGA 96
           +HVLC+ APF F+W AFW++  LY + G+FG T+SYHRNL HRSF LPK+LEY FAY G 
Sbjct: 51  LHVLCLSAPFTFSWSAFWLSLTLYAVCGVFGTTLSYHRNLTHRSFKLPKYLEYFFAYVGL 110

Query: 97  HALQGDPMDWVSTHRCHHRFVDTERDPHSPIQGFWFSHITWLLDSNLLTKKVCPNLKKIE 156
           HALQGDP+ WVSTHR HH+F DT  DPHSPI+GFWFSHI WL DS  + ++         
Sbjct: 111 HALQGDPVWWVSTHRYHHKFTDTYLDPHSPIEGFWFSHIFWLFDSKYILEEC-------- 170

Query: 157 RNIFILHTKRGRPENVGDLEKQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRI 216
                     GR EN GDL KQ++YRF+ RT+  H  + A +LY  GG PF++WGM VR 
Sbjct: 171 ----------GRYENAGDLLKQSYYRFLERTFVFHVYLQAALLYMFGGFPFIVWGMAVRT 230

Query: 217 IVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEW 276
           +   H +++VNSVCH +G + W T DLS NNW + +++ GEGWHNNHHAFEYSARHGIEW
Sbjct: 231 VWGFHASWLVNSVCHRYGHQAWDTGDLSTNNWFIAMLTSGEGWHNNHHAFEYSARHGIEW 290

Query: 277 WQIDFGWYVIMFLQAIGLATNVKVPSQEHKQKL 310
           WQID  WYVI  L+ +GLAT+VKVPS+ HK+K+
Sbjct: 291 WQIDTTWYVIKLLEYLGLATDVKVPSEVHKRKM 305

[Close]

BLAST of Sed0023400 vs. ExPASy Swiss-Prot
Match: O65797 (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=ADS1 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 3.1e-96
Identity = 158/302 (52.32%), Postives = 207/302 (68.54%), Query Frame = 0


Query: 10  EMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIITGLFGIT 69
           EM +   +  +RKW ++D   A +  FVH LC+ APF+FTW A  VA  +Y + GL GIT
Sbjct: 21  EMGRKKRAMWERKWKRLDIVKAFASLFVHFLCLLAPFNFTWPALRVALIVYTVGGL-GIT 80

Query: 70  VSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSPIQG 129
           VSYHRNLAHRSF +PKWLEY FAYCG  A+QGDP+DWVSTHR HH+F D++RDPHSP +G
Sbjct: 81  VSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEG 140

Query: 130 FWFSHITWLLDSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHRTYF 189
           FWFSH+ WL D+  L +K                   GR  NV DL++Q +Y+F+ RT  
Sbjct: 141 FWFSHLLWLFDTGYLVEKC------------------GRRTNVEDLKRQWYYKFLQRTVL 200

Query: 190 LHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWL 249
            H +    +LY  GG  FL WGMG+ + +  H+T ++NS+CH+WG R WKT D SRN W 
Sbjct: 201 YHILTFGFLLYYFGGLSFLTWGMGIGVAMEHHVTCLINSLCHVWGSRTWKTNDTSRNVWW 260

Query: 250 VGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQEHKQKL 309
           + + SFGE WHNNHHAFE SAR G+EWWQID  WY++ FL+ IGLAT+VK+PS+  ++++
Sbjct: 261 LSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIVRFLEIIGLATDVKLPSESQRRRM 303

Query: 310 GI 312
            +
Sbjct: 321 AM 303

[Close]

BLAST of Sed0023400 vs. ExPASy Swiss-Prot
Match: Q9FV68 (Icosanoyl-CoA 5-desaturase (Fragment) OS=Limnanthes douglasii OX=28973 PE=1 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 5.3e-96
Identity = 164/310 (52.90%), Postives = 208/310 (67.10%), Query Frame = 0


Query: 1   MEASKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALY 60
           +E  + +   + +    F +RKW   D   A +L  +H L   APF+F+W AFW++F L 
Sbjct: 59  LERFRTSEVVLERKAKGFWRRKWNPRDIQNAVTLLVLHALAAMAPFYFSWDAFWISFILL 118

Query: 61  -IITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDT 120
              +G+ GIT+ +HR L H  F LPK +EY FAYCG+ ALQGDPM+WVS HR HH+FVDT
Sbjct: 119 GFASGVLGITLCFHRCLTHGGFKLPKLVEYFFAYCGSLALQGDPMEWVSNHRYHHQFVDT 178

Query: 121 ERDPHSPIQGFWFSHITWLLDSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQA 180
           ERD HSP QGFWF HI W+LD +L  +K                 + GR  NV DL+KQA
Sbjct: 179 ERDVHSPTQGFWFCHIGWVLDKDLFVEK-----------------RGGRRNNVNDLKKQA 238

Query: 181 FYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWK 240
           FYRF+ +TY  H + L  +LY +GG P+++WGMG R++ + H TF +NSVCH WG R W 
Sbjct: 239 FYRFLQKTYMYHQLALIALLYYVGGFPYIVWGMGFRLVFMFHSTFAINSVCHKWGGRPWN 298

Query: 241 TRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVK 300
           T DLS NN  V + +FGEGWHNNHHAFE SARHG+EWW+ID  WYVI  LQAIGLATNVK
Sbjct: 299 TGDLSTNNMFVALCAFGEGWHNNHHAFEQSARHGLEWWEIDVTWYVIRTLQAIGLATNVK 351

Query: 301 VPSQEHKQKL 310
           +P++  KQKL
Sbjct: 359 LPTEAQKQKL 351

[Close]

BLAST of Sed0023400 vs. ExPASy TrEMBL
Match: A0A6J1DHZ7 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021091 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.7e-153
Identity = 250/317 (78.86%), Postives = 281/317 (88.64%), Query Frame = 0


Query: 1   MEASKQAPKEMMKPLSSFEKR-KWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFAL 60
           MEA KQ PKEM  P  SF KR KW K+DKD+A SLFFVH+L +FAPF+F W AFW+AFAL
Sbjct: 21  MEAPKQEPKEMAIPPKSFGKRKKWTKLDKDVACSLFFVHLLSMFAPFYFNWRAFWIAFAL 80

Query: 61  YIITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDT 120
           Y+ TGLFGI+VSYHRNLAH+SF LPKWLEY FAYCGAHALQGDP+DWV+THRCHHRFVDT
Sbjct: 81  YVATGLFGISVSYHRNLAHKSFTLPKWLEYLFAYCGAHALQGDPIDWVNTHRCHHRFVDT 140

Query: 121 ERDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDL 180
           ERDPHSPIQGFWFSHITWLLDS  LTK+VCP    + +K+ERNIF++ +K GRP+NVGDL
Sbjct: 141 ERDPHSPIQGFWFSHITWLLDSYSLTKRVCPKYFTDFQKVERNIFVMFSKHGRPDNVGDL 200

Query: 181 EKQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGK 240
           EKQ FYRFIH+TYFLHP+ILA+ILY  GGAPFLIWGMGVRI+VV+HIT M+NSVCHIWGK
Sbjct: 201 EKQTFYRFIHKTYFLHPIILAIILYAYGGAPFLIWGMGVRIVVVLHITCMINSVCHIWGK 260

Query: 241 RQWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLA 300
           + W+T DLSRNNW V +VSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYV+MFL+AIG+A
Sbjct: 261 QPWRTGDLSRNNWWVSLVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVVMFLEAIGIA 320

Query: 301 TNVKVPSQEHKQKLGID 313
           TNVKVPSQ  KQKL ID
Sbjct: 321 TNVKVPSQNQKQKLAID 337

[Close]

BLAST of Sed0023400 vs. ExPASy TrEMBL
Match: A0A6J1DJP0 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021101 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.6e-146
Identity = 233/311 (74.92%), Postives = 269/311 (86.50%), Query Frame = 0


Query: 1   MEASKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALY 60
           MEASKQ PKEMMKP   +E+RKW K+DKDIA SLF VH+LCI APF F W AFWVAF LY
Sbjct: 1   MEASKQEPKEMMKPPRPYERRKWTKLDKDIACSLFLVHLLCILAPFQFNWSAFWVAFVLY 60

Query: 61  IITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTE 120
           I+TGLFG+T+SYHRNLAH+SF LPKWLEY FAYCG  ALQGDPMDWVSTHRCHH+FVDTE
Sbjct: 61  IVTGLFGMTLSYHRNLAHKSFKLPKWLEYLFAYCGVQALQGDPMDWVSTHRCHHQFVDTE 120

Query: 121 RDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDLE 180
           RDPHSPI+GFWFSHI WL DS  LTKKVCP    N +K+ERNIF+L +K G+PENV DLE
Sbjct: 121 RDPHSPIRGFWFSHILWLFDSYNLTKKVCPKYFSNFQKLERNIFVLFSKHGKPENVADLE 180

Query: 181 KQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKR 240
           KQAFYRFIH+TY LHP++LAVILY +GG PFL+WGM VRI+VV+H T MVNSVCHIWGK+
Sbjct: 181 KQAFYRFIHQTYLLHPIVLAVILYVVGGIPFLVWGMAVRIVVVLHFTLMVNSVCHIWGKQ 240

Query: 241 QWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLAT 300
            W T D+S+NNW V +++FGEGWHNNHHAFEYSA+ G+EWWQ+DFGWY+I+FLQAIG+AT
Sbjct: 241 SWTTGDMSKNNWWVSLITFGEGWHNNHHAFEYSAKFGLEWWQLDFGWYMILFLQAIGVAT 300

Query: 301 NVKVPSQEHKQ 308
           +VK+PSQ H Q
Sbjct: 301 HVKLPSQSHMQ 311

[Close]

BLAST of Sed0023400 vs. ExPASy TrEMBL
Match: A0A6J1IP09 (delta-9 acyl-lipid desaturase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479233 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 9.9e-138
Identity = 228/325 (70.15%), Postives = 266/325 (81.85%), Query Frame = 0


Query: 2   EASKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYI 61
           +ASKQ PKEM+KP  SF +RKW K+DK +A  +  +H+LCIFAPFHFTW AF VA  L I
Sbjct: 19  DASKQEPKEMVKPPRSFWRRKWTKLDKRVAHVILLLHLLCIFAPFHFTWPAFRVAVTLQI 78

Query: 62  ITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTER 121
           ITGLFG+T+SYHRNLAH+SF +PKWLEY FAYCG HALQGDP+DWVSTHRCHH+FVDTER
Sbjct: 79  ITGLFGMTISYHRNLAHKSFQIPKWLEYLFAYCGVHALQGDPIDWVSTHRCHHQFVDTER 138

Query: 122 DPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDLEK 181
           DPHSPIQGFW SHI WL DS  LT KV P    NL+KIE+N+F+  +K  +PENVGDLE+
Sbjct: 139 DPHSPIQGFWMSHIMWLFDSYTLTDKVSPKYSSNLQKIEKNMFVYFSKYRKPENVGDLER 198

Query: 182 QAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQ 241
           Q FYRFIH+TY LHP+ LA ILYT+GG PFLIWGM VRI+V+ H TFMVNSVCH+WG++ 
Sbjct: 199 QTFYRFIHKTYLLHPIALAAILYTVGGVPFLIWGMCVRIVVIFHSTFMVNSVCHMWGQQH 258

Query: 242 WKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATN 301
           W+T DLSRNNW VG+ SFGEGWHNNHHAF+YSAR G+EWWQ+D GWYVI FLQ IGLAT+
Sbjct: 259 WRTGDLSRNNWWVGLTSFGEGWHNNHHAFKYSARLGLEWWQLDAGWYVIRFLQVIGLATD 318

Query: 302 VKVPSQEHKQKLGIDCKLPEDQNLK 323
           VK+PS  H Q L ++   PED  LK
Sbjct: 319 VKLPSPAHMQALALN--KPEDHLLK 341

[Close]

BLAST of Sed0023400 vs. ExPASy TrEMBL
Match: A0A1S4E0J1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494694 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.9e-137
Identity = 226/321 (70.40%), Postives = 262/321 (81.62%), Query Frame = 0


Query: 2   EASKQAPKEMMK-PLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALY 61
           E+ ++ PKEM+K P+ SF +RKW  +DK +A  + FVH+LCIFAPF F W AF VA AL 
Sbjct: 24  ESKQEEPKEMVKPPVRSFWRRKWTTLDKRVAYIISFVHLLCIFAPFQFNWSAFRVAVALK 83

Query: 62  IITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTE 121
           +ITGLFG+T+SYHRNLAH+SF LPKWLEY FAYCG HALQGDP+DWVSTHRCHH+FVDTE
Sbjct: 84  VITGLFGMTISYHRNLAHKSFQLPKWLEYLFAYCGVHALQGDPIDWVSTHRCHHQFVDTE 143

Query: 122 RDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDLE 181
           +DPHSPI GFW SH+ WL DS  LT KVCP    +LKKIERN+F++ TK G+P+NVGDLE
Sbjct: 144 KDPHSPINGFWISHMMWLFDSYTLTNKVCPKYSSDLKKIERNMFVIFTKHGKPDNVGDLE 203

Query: 182 KQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKR 241
           KQ FYRFIH+TY LH + LA+ILY +GG PF IWGM VRI+VV H TFMVNSVCHIWGK+
Sbjct: 204 KQRFYRFIHKTYMLHHLTLAIILYNVGGLPFFIWGMCVRIVVVFHSTFMVNSVCHIWGKQ 263

Query: 242 QWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLAT 301
            W+T DLSRNNWLVG+ SFGEGWHNNHHAF YSAR G+EWWQ+D GWYVI FLQ IGLAT
Sbjct: 264 PWRTGDLSRNNWLVGLTSFGEGWHNNHHAFSYSARLGLEWWQLDAGWYVIKFLQVIGLAT 323

Query: 302 NVKVPSQEHKQKLGIDCKLPE 318
           NVK+PS  H Q L +D K  E
Sbjct: 324 NVKLPSPSHMQNLAVDHKPKE 344

[Close]

BLAST of Sed0023400 vs. ExPASy TrEMBL
Match: A0A1S3BZB9 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494694 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.9e-137
Identity = 226/321 (70.40%), Postives = 262/321 (81.62%), Query Frame = 0


Query: 2   EASKQAPKEMMK-PLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALY 61
           E+ ++ PKEM+K P+ SF +RKW  +DK +A  + FVH+LCIFAPF F W AF VA AL 
Sbjct: 25  ESKQEEPKEMVKPPVRSFWRRKWTTLDKRVAYIISFVHLLCIFAPFQFNWSAFRVAVALK 84

Query: 62  IITGLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTE 121
           +ITGLFG+T+SYHRNLAH+SF LPKWLEY FAYCG HALQGDP+DWVSTHRCHH+FVDTE
Sbjct: 85  VITGLFGMTISYHRNLAHKSFQLPKWLEYLFAYCGVHALQGDPIDWVSTHRCHHQFVDTE 144

Query: 122 RDPHSPIQGFWFSHITWLLDSNLLTKKVCP----NLKKIERNIFILHTKRGRPENVGDLE 181
           +DPHSPI GFW SH+ WL DS  LT KVCP    +LKKIERN+F++ TK G+P+NVGDLE
Sbjct: 145 KDPHSPINGFWISHMMWLFDSYTLTNKVCPKYSSDLKKIERNMFVIFTKHGKPDNVGDLE 204

Query: 182 KQAFYRFIHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKR 241
           KQ FYRFIH+TY LH + LA+ILY +GG PF IWGM VRI+VV H TFMVNSVCHIWGK+
Sbjct: 205 KQRFYRFIHKTYMLHHLTLAIILYNVGGLPFFIWGMCVRIVVVFHSTFMVNSVCHIWGKQ 264

Query: 242 QWKTRDLSRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLAT 301
            W+T DLSRNNWLVG+ SFGEGWHNNHHAF YSAR G+EWWQ+D GWYVI FLQ IGLAT
Sbjct: 265 PWRTGDLSRNNWLVGLTSFGEGWHNNHHAFSYSARLGLEWWQLDAGWYVIKFLQVIGLAT 324

Query: 302 NVKVPSQEHKQKLGIDCKLPE 318
           NVK+PS  H Q L +D K  E
Sbjct: 325 NVKLPSPSHMQNLAVDHKPKE 345

[Close]

BLAST of Sed0023400 vs. TAIR 10
Match: AT3G15850.1 (fatty acid desaturase 5 )

HSP 1 Score: 399.1 bits (1024), Expect = 3.5e-111
Identity = 172/290 (59.31%), Postives = 219/290 (75.52%), Query Frame = 0


Query: 20  KRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIITGLFGITVSYHRNLAHR 79
           +R+W  +D      +  +H+L + APF F W A  VAF LYI+TGL GIT+S+HRNL+H+
Sbjct: 95  EREWKAMDFGAVAVVLSMHLLSLLAPFQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHK 154

Query: 80  SFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSPIQGFWFSHITWLL 139
           +F LPKWLEY FAYCGA ALQG+P+DWVSTHR HH+F D++RDPHSP+ GFWFSH+ W+ 
Sbjct: 155 AFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMF 214

Query: 140 DSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHRTYFLHPMILAVIL 199
           D+N +T++                   G P NVGDLEKQ FYRF+  TY LHP+ LAV L
Sbjct: 215 DTNTITQRC------------------GEPNNVGDLEKQPFYRFLRTTYILHPLALAVAL 274

Query: 200 YTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWLVGIVSFGEGW 259
           Y +GG PF++WGMGVRI+ V HIT++VNS CH+WGK+ W T DLS+NNW V  ++FGEGW
Sbjct: 275 YAMGGFPFIVWGMGVRIVWVYHITWLVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGW 334

Query: 260 HNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQEHKQKL 310
           HNNHHAFE+SARHG+EWWQ+D  WYV+ FLQAIGLAT+VK+PS+  KQ++
Sbjct: 335 HNNHHAFEFSARHGLEWWQLDMTWYVVKFLQAIGLATDVKLPSEAQKQRM 366

[Close]

BLAST of Sed0023400 vs. TAIR 10
Match: AT1G06080.1 (delta 9 desaturase 1 )

HSP 1 Score: 353.2 bits (905), Expect = 2.2e-97
Identity = 158/302 (52.32%), Postives = 207/302 (68.54%), Query Frame = 0


Query: 10  EMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIITGLFGIT 69
           EM +   +  +RKW ++D   A +  FVH LC+ APF+FTW A  VA  +Y + GL GIT
Sbjct: 21  EMGRKKRAMWERKWKRLDIVKAFASLFVHFLCLLAPFNFTWPALRVALIVYTVGGL-GIT 80

Query: 70  VSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSPIQG 129
           VSYHRNLAHRSF +PKWLEY FAYCG  A+QGDP+DWVSTHR HH+F D++RDPHSP +G
Sbjct: 81  VSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEG 140

Query: 130 FWFSHITWLLDSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHRTYF 189
           FWFSH+ WL D+  L +K                   GR  NV DL++Q +Y+F+ RT  
Sbjct: 141 FWFSHLLWLFDTGYLVEKC------------------GRRTNVEDLKRQWYYKFLQRTVL 200

Query: 190 LHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWL 249
            H +    +LY  GG  FL WGMG+ + +  H+T ++NS+CH+WG R WKT D SRN W 
Sbjct: 201 YHILTFGFLLYYFGGLSFLTWGMGIGVAMEHHVTCLINSLCHVWGSRTWKTNDTSRNVWW 260

Query: 250 VGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQEHKQKL 309
           + + SFGE WHNNHHAFE SAR G+EWWQID  WY++ FL+ IGLAT+VK+PS+  ++++
Sbjct: 261 LSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIVRFLEIIGLATDVKLPSESQRRRM 303

Query: 310 GI 312
            +
Sbjct: 321 AM 303

[Close]

BLAST of Sed0023400 vs. TAIR 10
Match: AT2G31360.1 (16:0delta9 desaturase 2 )

HSP 1 Score: 349.4 bits (895), Expect = 3.2e-96
Identity = 161/305 (52.79%), Postives = 202/305 (66.23%), Query Frame = 0


Query: 7   APKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIITGLF 66
           A +E  K    F  R+W ++D     + F VH L + APF+FTW A WV F  Y I GL 
Sbjct: 20  AVEEKKKRRWVFWDRRWRRLDYVKFSASFTVHSLALLAPFYFTWSALWVTFLFYTIGGL- 79

Query: 67  GITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSP 126
           GITVSYHRNLAHRSF +PKWLEY  AYC   A+QGDP+DWVSTHR HH+F D+ERDPHSP
Sbjct: 80  GITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSP 139

Query: 127 IQGFWFSHITWLLDSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHR 186
            +GFWFSH+ W+ DS  L  K                   GR  NV DL++Q FYRF+ +
Sbjct: 140 KEGFWFSHLLWIYDSAYLVSKC------------------GRRANVEDLKRQWFYRFLQK 199

Query: 187 TYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRN 246
           T   H + L   L+ LGG  F+ WGMGV   + +H+T ++NS+CHIWG R WKT D SRN
Sbjct: 200 TVLFHILGLGFFLFYLGGMSFVTWGMGVGAALEVHVTCLINSLCHIWGTRTWKTNDTSRN 259

Query: 247 NWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQEHK 306
            W + + SFGE WHNNHHAFE SAR G+EWWQID  WY++ F + IGLAT+VKVP++  +
Sbjct: 260 VWWLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIVRFFEIIGLATDVKVPTEAQR 305

Query: 307 QKLGI 312
           +++ I
Sbjct: 320 RRMAI 305

[Close]

BLAST of Sed0023400 vs. TAIR 10
Match: AT3G15870.1 (Fatty acid desaturase family protein )

HSP 1 Score: 340.5 bits (872), Expect = 1.5e-93
Identity = 156/289 (53.98%), Postives = 201/289 (69.55%), Query Frame = 0


Query: 17  SFEKRKWAKIDKDIARSLFFV--HVLCIFAPFHFTWGAFWVAFALYIITGLFGITVSYHR 76
           SF +R W     D+++ + FV  H+L + APF+F+W AFWV   L  I G+  IT+SYHR
Sbjct: 85  SFWERSWT--SWDVSKLVIFVGTHLLSLLAPFYFSWEAFWVFPWLVFINGIC-ITLSYHR 144

Query: 77  NLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDPHSPIQGFWFSH 136
           NL+HRSF+LPKWLEY FAY G  A QGDP++WVS HR HH+  +T+RDPHSP QGFWFSH
Sbjct: 145 NLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCETQRDPHSPTQGFWFSH 204

Query: 137 ITWLLDSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRFIHRTYFLHPMI 196
           + W+ D++ + +                    G  ENV DL +Q FYRF+ RT  LH M 
Sbjct: 205 MAWIFDTSSILENC------------------GGEENVDDLVRQPFYRFLQRTVLLHMMA 264

Query: 197 LAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDLSRNNWLVGIVS 256
            + + Y  GG P L+WG+G+ I V +H+TF+VNSVCHIWG R W T D S+NNW V I++
Sbjct: 265 YSFLFYFCGGMPLLVWGIGITIAVRLHLTFLVNSVCHIWGTRAWNTSDFSKNNWWVAILT 324

Query: 257 FGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQ 304
            GEGWHNNHHAFE+SARHG+EWWQ+D  W +I FL+AIGLATNVK+P++
Sbjct: 325 LGEGWHNNHHAFEFSARHGLEWWQLDITWCLIRFLEAIGLATNVKLPTE 352

[Close]

BLAST of Sed0023400 vs. TAIR 10
Match: AT1G06120.1 (Fatty acid desaturase family protein )

HSP 1 Score: 323.6 bits (828), Expect = 1.9e-88
Identity = 150/308 (48.70%), Postives = 200/308 (64.94%), Query Frame = 0


Query: 4   SKQAPKEMMKPLSSFEKRKWAKIDKDIARSLFFVHVLCIFAPFHFTWGAFWVAFALYIIT 63
           S    K + K   +F  RKW ++D     ++  VH+LC+ APF++TW AF  A  + I T
Sbjct: 9   SSSQSKAVRKEKRAFLFRKWTRVDVMRVSAVGAVHLLCLLAPFNYTWEAFRFAAMVGIST 68

Query: 64  GLFGITVSYHRNLAHRSFNLPKWLEYTFAYCGAHALQGDPMDWVSTHRCHHRFVDTERDP 123
            L  IT SYHRNL HRSF LPKWLEY FAY    ALQG P+DWVSTHR HH+F D++RDP
Sbjct: 69  NL-SITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQFTDSDRDP 128

Query: 124 HSPIQGFWFSHITWLLDSNLLTKKVCPNLKKIERNIFILHTKRGRPENVGDLEKQAFYRF 183
           HSPI+GFWFSH+ W+ D++ + +K                   G  +NV DL++Q FYRF
Sbjct: 129 HSPIEGFWFSHVFWIFDTSYIREKC------------------GGRDNVMDLKQQWFYRF 188

Query: 184 IHRTYFLHPMILAVILYTLGGAPFLIWGMGVRIIVVIHITFMVNSVCHIWGKRQWKTRDL 243
           +  T  LH +   +++Y  GG P+L W +GV   +  H T+++NS CHIWG R W T+D 
Sbjct: 189 LQNTIGLHILTFWILVYLWGGLPYLTWSVGVGGAIGYHATWLINSACHIWGSRAWNTKDT 248

Query: 244 SRNNWLVGIVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVIMFLQAIGLATNVKVPSQ 303
           SRN W +G  + GE WHNNHHAFE SARHG+EW+Q+D  WY+I F Q +GLAT+VK+P+ 
Sbjct: 249 SRNIWWLGPFTMGESWHNNHHAFEASARHGLEWYQVDLTWYLIWFFQVLGLATDVKLPTD 297

Query: 304 EHKQKLGI 312
             K+K+ +
Sbjct: 309 AQKRKMSL 297

The following BLAST results are available for this feature:

BLAST of Sed0023400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153632.1	3.5e-153	78.86	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [M...	[more]
XP_022153644.1	5.4e-146	74.92	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [M...	[more]
XP_011652978.2	1.6e-145	75.47	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumi...	[more]
XP_038903746.1	1.1e-138	69.25	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [B...	[more]
XP_022979557.1	2.1e-137	70.15	delta-9 acyl-lipid desaturase 1-like [Cucurbita maxima]	[more]

BLAST of Sed0023400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949X0	4.9e-110	59.31	Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arab...	[more]
P0DOW2	6.1e-100	56.75	Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1	[more]
P0DOW3	6.3e-97	57.88	Acyl-CoA 5-desaturase AL21 OS=Anemone leveillei OX=212809 GN=AL21 PE=1 SV=1	[more]
O65797	3.1e-96	52.32	Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=ADS1 PE=2 SV=...	[more]
Q9FV68	5.3e-96	52.90	Icosanoyl-CoA 5-desaturase (Fragment) OS=Limnanthes douglasii OX=28973 PE=1 SV=1	[more]

BLAST of Sed0023400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHZ7	1.7e-153	78.86	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
A0A6J1DJP0	2.6e-146	74.92	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
A0A6J1IP09	9.9e-138	70.15	delta-9 acyl-lipid desaturase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479233...	[more]
A0A1S4E0J1	2.9e-137	70.40	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like is...	[more]
A0A1S3BZB9	2.9e-137	70.40	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like is...	[more]

BLAST of Sed0023400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15850.1	3.5e-111	59.31	fatty acid desaturase 5	[more]
AT1G06080.1	2.2e-97	52.32	delta 9 desaturase 1	[more]
AT2G31360.1	3.2e-96	52.79	16:0delta9 desaturase 2	[more]
AT3G15870.1	1.5e-93	53.98	Fatty acid desaturase family protein	[more]
AT1G06120.1	1.9e-88	48.70	Fatty acid desaturase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015876	Acyl-CoA desaturase	PRINTS	PR00075	FACDDSATRASE	coord: 256..270 score: 60.7 coord: 73..93 score: 29.82 coord: 110..139 score: 55.44
IPR015876	Acyl-CoA desaturase	PANTHER	PTHR11351	ACYL-COA DESATURASE	coord: 17..312
IPR015876	Acyl-CoA desaturase	CDD	cd03505	Delta9-FADS-like	coord: 50..299 e-value: 3.45637E-75 score: 227.054
IPR005804	Fatty acid desaturase domain	PFAM	PF00487	FA_desaturase	coord: 53..281 e-value: 4.0E-19 score: 69.4
None	No IPR available	PANTHER	PTHR11351:SF87	FATTY ACID DESATURASE, TYPE 1, CORE-RELATED	coord: 17..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023400.1	Sed0023400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009979	16:0 monogalactosyldiacylglycerol desaturase activity
molecular_function	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water