Homology
BLAST of Sed0023304 vs. NCBI nr
Match:
XP_022984381.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita maxima])
HSP 1 Score: 1759.2 bits (4555), Expect = 0.0e+00
Identity = 844/939 (89.88%), Postives = 892/939 (94.99%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+LFF DICG+G KPSGFV
Sbjct: 143 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVLFFRDICGIGVKPSGFV 202
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLHG+A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 203 IASLVTACNKSSCMANEGFQLHGFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 262
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALVISSCGFLVDVLLGH
Sbjct: 263 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVISSCGFLVDVLLGH 322
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MFGGCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 323 QLLGHVLKFGLETKVSAANSLISMFGGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 382
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 383 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 442
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+DLISWNSMLACYVQDGR LCAL VF+EMLW+KKEI
Sbjct: 443 TLLSMYSDAGRSEDAEMIFRRMPERDLISWNSMLACYVQDGRCLCALNVFAEMLWMKKEI 502
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDP FL+EGKILHG VIILGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 503 NYVTFTSALAACLDPGFLTEGKILHGSVIILGLQDDLIIGNTLITFYGKCHKMAEAKKLL 562
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYIT+V+ LGSCLT EDL
Sbjct: 563 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITVVNTLGSCLTNEDL 622
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 623 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 682
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSV ADLAMLEEGQQLHGST+KLGFE
Sbjct: 683 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVTADLAMLEEGQQLHGSTLKLGFEC 742
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL+ILP+PT+RSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 743 DHFVINAAMDMYGKCGELDDALKILPRPTNRSRLSWNTLISVFARHGHFHKARETFHEML 802
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 803 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 862
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 863 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 922
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 923 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 982
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 983 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 1042
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 1043 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 1080
BLAST of Sed0023304 vs. NCBI nr
Match:
XP_022984382.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 [Cucurbita maxima])
HSP 1 Score: 1759.2 bits (4555), Expect = 0.0e+00
Identity = 844/939 (89.88%), Postives = 892/939 (94.99%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+LFF DICG+G KPSGFV
Sbjct: 1 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVLFFRDICGIGVKPSGFV 60
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLHG+A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 61 IASLVTACNKSSCMANEGFQLHGFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 120
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALVISSCGFLVDVLLGH
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVISSCGFLVDVLLGH 180
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MFGGCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 181 QLLGHVLKFGLETKVSAANSLISMFGGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 240
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 241 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 300
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+DLISWNSMLACYVQDGR LCAL VF+EMLW+KKEI
Sbjct: 301 TLLSMYSDAGRSEDAEMIFRRMPERDLISWNSMLACYVQDGRCLCALNVFAEMLWMKKEI 360
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDP FL+EGKILHG VIILGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 361 NYVTFTSALAACLDPGFLTEGKILHGSVIILGLQDDLIIGNTLITFYGKCHKMAEAKKLL 420
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYIT+V+ LGSCLT EDL
Sbjct: 421 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITVVNTLGSCLTNEDL 480
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 481 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 540
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSV ADLAMLEEGQQLHGST+KLGFE
Sbjct: 541 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVTADLAMLEEGQQLHGSTLKLGFEC 600
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL+ILP+PT+RSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 601 DHFVINAAMDMYGKCGELDDALKILPRPTNRSRLSWNTLISVFARHGHFHKARETFHEML 660
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 661 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 721 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 780
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 781 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 840
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 900
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 901 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 938
BLAST of Sed0023304 vs. NCBI nr
Match:
XP_022923106.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 [Cucurbita moschata])
HSP 1 Score: 1754.6 bits (4543), Expect = 0.0e+00
Identity = 840/939 (89.46%), Postives = 890/939 (94.78%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+ FF DICG+G KPSGFV
Sbjct: 1 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVSFFRDICGIGVKPSGFV 60
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLH +A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 61 IASLVTACNKSSCMANEGFQLHCFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 120
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALV+SSCGFLVDVLLGH
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVVSSCGFLVDVLLGH 180
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MF GCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 181 QLLGHVLKFGLETKVSAANSLISMFSGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 240
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 241 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 300
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+D+ISWNSMLACY QDGR LCAL VF+EMLW+KKEI
Sbjct: 301 TLLSMYSDAGRSEDAEMIFRRMPERDVISWNSMLACYAQDGRFLCALNVFAEMLWMKKEI 360
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDPEFL+EGKILHG VI+LGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 361 NYVTFTSALAACLDPEFLTEGKILHGSVIVLGLQDDLIIGNTLITFYGKCHKMAEAKKLL 420
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYITIV+ LGSCLT EDL
Sbjct: 421 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITIVNTLGSCLTNEDL 480
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 481 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 540
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGST+KLGFE
Sbjct: 541 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTLKLGFEC 600
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL++LP+PTDRSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 601 DHFVINAAMDMYGKCGELDDALKVLPRPTDRSRLSWNTLISVFARHGHFHKARETFHEML 660
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 661 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 721 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 780
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 781 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 840
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 900
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 901 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 938
BLAST of Sed0023304 vs. NCBI nr
Match:
XP_022923099.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita moschata] >XP_022923100.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita moschata] >XP_022923101.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita moschata] >XP_022923103.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita moschata] >XP_022923104.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita moschata] >XP_022923105.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita moschata])
HSP 1 Score: 1754.6 bits (4543), Expect = 0.0e+00
Identity = 840/939 (89.46%), Postives = 890/939 (94.78%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+ FF DICG+G KPSGFV
Sbjct: 143 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVSFFRDICGIGVKPSGFV 202
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLH +A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 203 IASLVTACNKSSCMANEGFQLHCFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 262
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALV+SSCGFLVDVLLGH
Sbjct: 263 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVVSSCGFLVDVLLGH 322
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MF GCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 323 QLLGHVLKFGLETKVSAANSLISMFSGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 382
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 383 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 442
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+D+ISWNSMLACY QDGR LCAL VF+EMLW+KKEI
Sbjct: 443 TLLSMYSDAGRSEDAEMIFRRMPERDVISWNSMLACYAQDGRFLCALNVFAEMLWMKKEI 502
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDPEFL+EGKILHG VI+LGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 503 NYVTFTSALAACLDPEFLTEGKILHGSVIVLGLQDDLIIGNTLITFYGKCHKMAEAKKLL 562
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYITIV+ LGSCLT EDL
Sbjct: 563 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITIVNTLGSCLTNEDL 622
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 623 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 682
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGST+KLGFE
Sbjct: 683 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTLKLGFEC 742
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL++LP+PTDRSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 743 DHFVINAAMDMYGKCGELDDALKVLPRPTDRSRLSWNTLISVFARHGHFHKARETFHEML 802
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 803 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 862
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 863 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 922
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 923 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 982
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 983 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 1042
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 1043 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 1080
BLAST of Sed0023304 vs. NCBI nr
Match:
XP_023551747.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1751.9 bits (4536), Expect = 0.0e+00
Identity = 838/939 (89.24%), Postives = 890/939 (94.78%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSK GRI YARLVFD MP+RNEASWN+MMSGYVRVG ++EA+LFF DICG+G KPSGFV
Sbjct: 143 MYSKLGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFV 202
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLHG+A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 203 IASLVTACNKSSCMANEGFQLHGFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 262
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALVISSCGFLVDVLLGH
Sbjct: 263 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVISSCGFLVDVLLGH 322
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MFGGCG+I+EACSIFNEMN+RDTISWNSIISANAQNA
Sbjct: 323 QLLGHVLKFGLETKVSAANSLISMFGGCGDIDEACSIFNEMNDRDTISWNSIISANAQNA 382
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICL N
Sbjct: 383 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLSN 442
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+D+ISWNSMLACY QDGR LCAL VF+EMLW+KKEI
Sbjct: 443 TLLSMYSDAGRSEDAEMIFRRMPERDVISWNSMLACYAQDGRFLCALNVFAEMLWMKKEI 502
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDPEFL+EGKILHG VI+LGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 503 NYVTFTSALAACLDPEFLTEGKILHGSVIVLGLQDDLIIGNTLITFYGKCHKMAEAKKLL 562
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYITIV+ LGSCLT EDL
Sbjct: 563 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITIVNTLGSCLTNEDL 622
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHT VTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 623 IKYGRPIHAHTAVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 682
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAA+SVAADLAMLEEGQQLHGST+KLGFE
Sbjct: 683 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAAISVAADLAMLEEGQQLHGSTLKLGFEC 742
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL+ILP+PTDRSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 743 DHFVINAAMDMYGKCGELDDALKILPRPTDRSRLSWNTLISVFARHGHFHKARETFHEML 802
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 803 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 862
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 863 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 922
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 923 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 982
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLIN+PEGT VRIFKNLRVCG
Sbjct: 983 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINVPEGTTVRIFKNLRVCG 1042
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 1043 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 1080
BLAST of Sed0023304 vs. ExPASy Swiss-Prot
Match:
Q9FIB2 (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)
HSP 1 Score: 587.8 bits (1514), Expect = 2.2e-166
Identity = 343/957 (35.84%), Postives = 528/957 (55.17%), Query Frame = 0
Query: 2 YSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFVI 61
Y + G AR VFD MP RN SW ++SGY R G H EA++F D+ G + +
Sbjct: 46 YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105
Query: 62 ASLVTACNKSSSMA-NEGFQLHGYAMKCGLIYDVFVGTSFVHFYGS-YGIVSNAQKMFSE 121
S++ AC + S+ G Q+HG K D V + Y G V A F +
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 122 MPDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNI-ALVISSCGFL-VDVL 181
+ +N VSW S++ YS G + + M+++G E +LV ++C DV
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVR 225
Query: 182 LGHQLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANA 241
L Q++ + K GL T + + L+ F G+++ A +FN+M R+ ++ N ++
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 242 QNALHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDY-------LKWGKGLHGLVVKY 301
+ EE+ + F M + I+ + S ++ + +Y LK G+ +HG V+
Sbjct: 286 RQKWGEEATKLFMDM---NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 345
Query: 302 GL-EPNICLCNTLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKV 361
GL + + + N L+NMY+ G DA +F M++KD +SWNSM+ Q+G + A++
Sbjct: 346 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 405
Query: 362 FSEMLWLKKEINYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGK 421
+ M TL S+L+SC ++ G+ +HG + LG+ + + N L+T Y +
Sbjct: 406 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 465
Query: 422 CHKMSEAKRLFQRMPKHDKVTWNALIGGYAENEEP-NEAVAAFKLMRKGGTHDIDYITIV 481
++E +++F MP+HD+V+WN++IG A +E EAV F ++ G ++ IT
Sbjct: 466 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG-QKLNRITFS 525
Query: 482 SILGSCLTCEDLMKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLV 541
S+L S ++ + G IH + D+ +++LI Y KCG+ +F ++
Sbjct: 526 SVL-SAVSSLSFGELGKQIHGLALKNNI-ADEATTENALIACYGKCGEMDGCEKIFSRMA 585
Query: 542 FKTSSV-WNAIITANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQ 601
+ +V WN++I+ +AL LV M + G D F ++ LS A +A LE G
Sbjct: 586 ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM 645
Query: 602 QLHGSTIKLGFEFDHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHG 661
++H +++ E D V +A +DMY KCG LD ALR R+ SWN++IS +ARHG
Sbjct: 646 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 705
Query: 662 HFHKARETFHEMLKMD--VKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIE 721
+A + F E +K+D PDHV+FV +LSACSH GL++EG ++ SM+ YG+ P IE
Sbjct: 706 QGEEALKLF-ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIE 765
Query: 722 HCVCMIDLLGRSGRLVEAETFIGEMPMPPNDFVWRSLLASC--KIHRNLDLGRKAAERLF 781
H CM D+LGR+G L + E FI +MPM PN +WR++L +C R +LG+KAAE LF
Sbjct: 766 HFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF 825
Query: 782 ELDPSDDSAYVLYSNVFATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGD 841
+L+P + YVL N++A GRW D+ R +M ++K+ +SWV K + +F GD
Sbjct: 826 QLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD 885
Query: 842 QTHSQTDQINTKLLELMKMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLIN 901
++H D I KL EL + +R+AGYVP T ++L D ++E KE + HSE++A+AF L
Sbjct: 886 KSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAA 945
Query: 902 IPEGT-AVRIFKNLRVCGDCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
T +RI KNLRVCGDCHS FK+ S I GR+I+LRD RFHHF DG CSCSD+W
Sbjct: 946 QRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
BLAST of Sed0023304 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 575.5 bits (1482), Expect = 1.1e-162
Identity = 305/928 (32.87%), Postives = 507/928 (54.63%), Query Frame = 0
Query: 14 VFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFVIASLVTACNKSSS 73
VFD MP+R +WN M+ L E F+ + P+ + ++ AC S
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 74 MANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEMPDRNVVSWTSLMV 133
+ Q+H + GL V + Y G V A+++F + ++ SW +++
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 134 SYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGHQLLGQVIKFGLET 193
S + + I + M GI + V+S+C + + +G QL G V+K G +
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 194 KVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNALHEESFRYFYRMR 253
N+L+ ++ GN+ A IF+ M++RD +++N++I+ +Q E++ F RM
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 254 LVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCNTLLNMYSDAGRSK 313
L E + TL+ L+ C + L G+ LH K G N + LLN+Y+ +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 314 DAELIFSRMSEKDLISWNSMLACY--VQDGRHLCALKVFSEMLWLKKEINYVTLTSALAS 373
A F ++++ WN ML Y + D R+ + ++F +M + N T S L +
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRN--SFRIFRQMQIEEIVPNQYTYPSILKT 501
Query: 374 CLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLFQRMPKHDKVTW 433
C+ L G+ +H +I Q + + LI Y K K+ A + R D V+W
Sbjct: 502 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 561
Query: 434 NALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDLMKYGMAIHAHT 493
+I GY + ++A+ F+ M G D + + + + +C + L K G IHA
Sbjct: 562 TTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQAL-KEGQQIHAQA 621
Query: 494 VVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIITANARYGFGEEA 553
V+GF D Q++L+T+Y++CG + S F++ + WNA+++ + G EEA
Sbjct: 622 CVSGFSSDLP-FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 681
Query: 554 LKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEFDHFVLNAAMDM 613
L++ RM R GI+ + F F +A+ A++ A +++G+Q+H K G++ + V NA + M
Sbjct: 682 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 741
Query: 614 YGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEMLKMDVKPDHVSF 673
Y KCG + DA + + + ++ +SWN +I+ +++HG +A ++F +M+ +V+P+HV+
Sbjct: 742 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 801
Query: 674 VCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRLVEAETFIGEMP 733
V +LSACSH GLVD+G+AY+ SM SEYG+ P EH VC++D+L R+G L A+ FI EMP
Sbjct: 802 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 861
Query: 734 MPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVFATIGRWNDVED 793
+ P+ VWR+LL++C +H+N+++G AA L EL+P D + YVL SN++A +W+ +
Sbjct: 862 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 921
Query: 794 VRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELMKMVREAGYVPD 853
R +M K ++K+P SW++ K +I F +GDQ H D+I+ +L K E GYV D
Sbjct: 922 TRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 981
Query: 854 TSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCGDCHSFFKFASG 913
L + EQK+ ++ HSE++A++FGL+++P + + KNLRVC DCH++ KF S
Sbjct: 982 CFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSK 1041
Query: 914 ILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
+ R+I++RD YRFHHF G CSC DYW
Sbjct: 1042 VSNREIIVRDAYRFHHFEGGACSCKDYW 1064
BLAST of Sed0023304 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 571.2 bits (1471), Expect = 2.1e-161
Identity = 321/946 (33.93%), Postives = 512/946 (54.12%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVR-----VGLHLEAMLFFLDICGMGTK 60
MYSK G + YAR VFD MP R+ SWN++++ Y + V +A L F +
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 61 PSGFVIASLVTACNKSSSM-ANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQ 120
S ++ ++ C S + A+E F HGYA K GL D FV + V+ Y +G V +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESF--HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGK 202
Query: 121 KMFSEMPDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLV 180
+F EMP R+VV W ++ +Y G KE+ I+ G+ NE + L+ G
Sbjct: 203 VLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS 262
Query: 181 DVLLGHQLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIIS 240
D GQV F N N+A S+ + I N +S
Sbjct: 263 DA-------GQVKSF-------------------ANGNDASSV------SEIIFRNKGLS 322
Query: 241 ANAQNALHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEP 300
+ + + F M E + T ++L+ VD L G+ +H + +K GL+
Sbjct: 323 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 382
Query: 301 NICLCNTLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEML 360
+ + N+L+NMY + A +F MSE+DLISWNS++A Q+G + A+ +F ++L
Sbjct: 383 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 442
Query: 361 WLKKEINYVTLTSAL-ASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKM 420
+ + T+TS L A+ PE LS K +H I + + LI Y + M
Sbjct: 443 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 502
Query: 421 SEAKRLFQRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGS 480
EA+ LF+R D V WNA++ GY ++ + ++ + F LM K G D+ T+ ++ +
Sbjct: 503 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF-TLATVFKT 562
Query: 481 CLTCEDLMKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSS 540
C + G +HA+ + +G+DLD V S ++ MY KCGD ++ + FD +
Sbjct: 563 C-GFLFAINQGKQVHAYAIKSGYDLD-LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 622
Query: 541 VWNAIITANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGST 600
W +I+ G E A + ++MR G+ D+F + ++ L LE+G+Q+H +
Sbjct: 623 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 682
Query: 601 IKLGFEFDHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKAR 660
+KL D FV + +DMY KCG +DDA + + + +WN ++ A+HG +
Sbjct: 683 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 742
Query: 661 ETFHEMLKMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDL 720
+ F +M + +KPD V+F+ +LSACSH GLV E + SM +YGI+P IEH C+ D
Sbjct: 743 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 802
Query: 721 LGRSGRLVEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAY 780
LGR+G + +AE I M M + ++R+LLA+C++ + + G++ A +L EL+P D SAY
Sbjct: 803 LGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAY 862
Query: 781 VLYSNVFATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN 840
VL SN++A +W++++ R M K++K P SW++ K I IF + D+++ QT+ I
Sbjct: 863 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 922
Query: 841 TKLLELMKMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIF 900
K+ ++++ +++ GYVP+T ++L D +EE+KE ++ HSE++A+AFGL++ P T +R+
Sbjct: 923 RKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVI 982
Query: 901 KNLRVCGDCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
KNLRVCGDCH+ K+ + + R+IVLRD RFH F DG CSC DYW
Sbjct: 983 KNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of Sed0023304 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 554.7 bits (1428), Expect = 2.0e-156
Identity = 308/885 (34.80%), Postives = 485/885 (54.80%), Query Frame = 0
Query: 62 ASLVTACNKSSSMANEGFQLHGYAMKCGLIYDV-FVGTSFVHFYGSYGIVSNAQKMFSEM 121
A ++ C K ++ ++G QLH K +++ F+ V YG G + +A+K+F EM
Sbjct: 84 AYVLELCGKRRAV-SQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 143
Query: 122 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 181
PDR +W +++ +Y + G + Y MR EG+ ++ ++ +C L D+ G
Sbjct: 144 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 203
Query: 182 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNER-DTISWNSIISANAQN 241
+L ++K G + N+L+ M+ +++ A +F+ E+ D + WNSI+S+ + +
Sbjct: 204 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 263
Query: 242 ALHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPN-ICL 301
E+ F M + N T+ L+ C Y K GK +H V+K + + +
Sbjct: 264 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 323
Query: 302 CNTLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKK 361
CN L+ MY+ G+ AE I +M+ D+++WNS++ YVQ+ + AL+ FS+M+
Sbjct: 324 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 383
Query: 362 EINYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKR 421
+ + V++TS +A+ L G LH +VI G L +GNTLI Y KC+ R
Sbjct: 384 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 443
Query: 422 LFQRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCE 481
F RM D ++W +I GYA+N+ EA+ F+ + K +ID + ILGS L
Sbjct: 444 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEM----ILGSILRAS 503
Query: 482 DLMKYGM---AIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVW 541
++K + IH H + G L +Q+ L+ +Y KC + ++ +F+ + K W
Sbjct: 504 SVLKSMLIVKEIHCHILRKG--LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 563
Query: 542 NAIITANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIK 601
++I+++A G EA++L RM G+ D LS AA L+ L +G+++H ++
Sbjct: 564 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR 623
Query: 602 LGFEFDHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARET 661
GF + + A +DMY CG+L A + + + L + ++I+ + HG A E
Sbjct: 624 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 683
Query: 662 FHEMLKMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLG 721
F +M +V PDH+SF+ LL ACSH GL+DEG + M EY ++P EH VC++D+LG
Sbjct: 684 FDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLG 743
Query: 722 RSGRLVEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVL 781
R+ +VEA F+ M P VW +LLA+C+ H ++G AA+RL EL+P + VL
Sbjct: 744 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 803
Query: 782 YSNVFATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTK 841
SNVFA GRWNDVE VR +M A ++K P SW++ G + F D++H ++ +I K
Sbjct: 804 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEK 863
Query: 842 LLEL-MKMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFK 901
L E+ K+ RE GYV DT + L + DE +K + HSERIA+A+GL+ P+ +RI K
Sbjct: 864 LSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITK 923
Query: 902 NLRVCGDCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
NLRVC DCH+F K S + R IV+RD RFHHF G CSC D W
Sbjct: 924 NLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
BLAST of Sed0023304 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 531.2 bits (1367), Expect = 2.4e-149
Identity = 282/882 (31.97%), Postives = 483/882 (54.76%), Query Frame = 0
Query: 60 VIASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSE 119
V + ++ SSS NE ++H + GL F + Y + +++ +F
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 120 M-PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLL 179
+ P +NV W S++ ++S G + + Y ++R + ++ VI +C L D +
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 180 GHQLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQ 239
G + Q++ G E+ + N+L+ M+ G + A +F+EM RD +SWNS+IS +
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 240 NALHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICL 299
+ +EE+ ++ ++ + T+S +L G++ +K G+GLHG +K G+ + +
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 300 CNTLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKK 359
N L+ MY R DA +F M +D +S+N+M+ Y++ ++++F E L K
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK 304
Query: 360 EINYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKR 419
+ +T++S L +C LS K ++ +++ G + N LI Y KC M A+
Sbjct: 305 P-DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 364
Query: 420 LFQRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCE 479
+F M D V+WN++I GY ++ + EA+ FK+M D+IT + ++
Sbjct: 365 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI-MEEQADHITYLMLISVSTRLA 424
Query: 480 DLMKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAI 539
DL K+G +H++ + +G +D V ++LI MYAKCG+ S +F + + WN +
Sbjct: 425 DL-KFGKGLHSNGIKSGICIDLS-VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTV 484
Query: 540 ITANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGF 599
I+A R+G L++ +MR++ + D F L + A LA G+++H ++ G+
Sbjct: 485 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 544
Query: 600 EFDHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHE 659
E + + NA ++MY KCG L+++ R+ + + R ++W +I + +G KA ETF +
Sbjct: 545 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 604
Query: 660 MLKMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSG 719
M K + PD V F+ ++ ACSH GLVDEGLA + M + Y I P IEH C++DLL RS
Sbjct: 605 MEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 664
Query: 720 RLVEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSN 779
++ +AE FI MP+ P+ +W S+L +C+ +++ + + R+ EL+P D +L SN
Sbjct: 665 KISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASN 724
Query: 780 VFATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLE 839
+A + +W+ V +R + K I K P +SW++ N+ +F GD + Q++ I L
Sbjct: 725 AYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEI 784
Query: 840 LMKMVREAGYVPDTSYSLQDTDEEQKEHNM-WNHSERIALAFGLINIPEGTAVRIFKNLR 899
L ++ + GY+PD Q+ +EE+++ + HSER+A+AFGL+N GT +++ KNLR
Sbjct: 785 LYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLR 844
Query: 900 VCGDCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
VCGDCH K S I+GR+I++RD RFH F DG CSC D W
Sbjct: 845 VCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
BLAST of Sed0023304 vs. ExPASy TrEMBL
Match:
A0A6J1J211 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482698 PE=3 SV=1)
HSP 1 Score: 1759.2 bits (4555), Expect = 0.0e+00
Identity = 844/939 (89.88%), Postives = 892/939 (94.99%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+LFF DICG+G KPSGFV
Sbjct: 1 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVLFFRDICGIGVKPSGFV 60
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLHG+A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 61 IASLVTACNKSSCMANEGFQLHGFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 120
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALVISSCGFLVDVLLGH
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVISSCGFLVDVLLGH 180
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MFGGCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 181 QLLGHVLKFGLETKVSAANSLISMFGGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 240
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 241 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 300
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+DLISWNSMLACYVQDGR LCAL VF+EMLW+KKEI
Sbjct: 301 TLLSMYSDAGRSEDAEMIFRRMPERDLISWNSMLACYVQDGRCLCALNVFAEMLWMKKEI 360
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDP FL+EGKILHG VIILGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 361 NYVTFTSALAACLDPGFLTEGKILHGSVIILGLQDDLIIGNTLITFYGKCHKMAEAKKLL 420
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYIT+V+ LGSCLT EDL
Sbjct: 421 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITVVNTLGSCLTNEDL 480
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 481 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 540
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSV ADLAMLEEGQQLHGST+KLGFE
Sbjct: 541 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVTADLAMLEEGQQLHGSTLKLGFEC 600
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL+ILP+PT+RSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 601 DHFVINAAMDMYGKCGELDDALKILPRPTNRSRLSWNTLISVFARHGHFHKARETFHEML 660
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 661 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 721 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 780
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 781 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 840
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 900
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 901 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 938
BLAST of Sed0023304 vs. ExPASy TrEMBL
Match:
A0A6J1J531 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482698 PE=3 SV=1)
HSP 1 Score: 1759.2 bits (4555), Expect = 0.0e+00
Identity = 844/939 (89.88%), Postives = 892/939 (94.99%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+LFF DICG+G KPSGFV
Sbjct: 143 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVLFFRDICGIGVKPSGFV 202
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLHG+A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 203 IASLVTACNKSSCMANEGFQLHGFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 262
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALVISSCGFLVDVLLGH
Sbjct: 263 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVISSCGFLVDVLLGH 322
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MFGGCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 323 QLLGHVLKFGLETKVSAANSLISMFGGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 382
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 383 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 442
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+DLISWNSMLACYVQDGR LCAL VF+EMLW+KKEI
Sbjct: 443 TLLSMYSDAGRSEDAEMIFRRMPERDLISWNSMLACYVQDGRCLCALNVFAEMLWMKKEI 502
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDP FL+EGKILHG VIILGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 503 NYVTFTSALAACLDPGFLTEGKILHGSVIILGLQDDLIIGNTLITFYGKCHKMAEAKKLL 562
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYIT+V+ LGSCLT EDL
Sbjct: 563 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITVVNTLGSCLTNEDL 622
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 623 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 682
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSV ADLAMLEEGQQLHGST+KLGFE
Sbjct: 683 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVTADLAMLEEGQQLHGSTLKLGFEC 742
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL+ILP+PT+RSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 743 DHFVINAAMDMYGKCGELDDALKILPRPTNRSRLSWNTLISVFARHGHFHKARETFHEML 802
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 803 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 862
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 863 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 922
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 923 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 982
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 983 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 1042
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 1043 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 1080
BLAST of Sed0023304 vs. ExPASy TrEMBL
Match:
A0A6J1E5W6 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430871 PE=3 SV=1)
HSP 1 Score: 1754.6 bits (4543), Expect = 0.0e+00
Identity = 840/939 (89.46%), Postives = 890/939 (94.78%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+ FF DICG+G KPSGFV
Sbjct: 143 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVSFFRDICGIGVKPSGFV 202
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLH +A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 203 IASLVTACNKSSCMANEGFQLHCFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 262
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALV+SSCGFLVDVLLGH
Sbjct: 263 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVVSSCGFLVDVLLGH 322
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MF GCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 323 QLLGHVLKFGLETKVSAANSLISMFSGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 382
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 383 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 442
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+D+ISWNSMLACY QDGR LCAL VF+EMLW+KKEI
Sbjct: 443 TLLSMYSDAGRSEDAEMIFRRMPERDVISWNSMLACYAQDGRFLCALNVFAEMLWMKKEI 502
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDPEFL+EGKILHG VI+LGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 503 NYVTFTSALAACLDPEFLTEGKILHGSVIVLGLQDDLIIGNTLITFYGKCHKMAEAKKLL 562
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYITIV+ LGSCLT EDL
Sbjct: 563 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITIVNTLGSCLTNEDL 622
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 623 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 682
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGST+KLGFE
Sbjct: 683 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTLKLGFEC 742
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL++LP+PTDRSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 743 DHFVINAAMDMYGKCGELDDALKVLPRPTDRSRLSWNTLISVFARHGHFHKARETFHEML 802
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 803 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 862
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 863 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 922
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 923 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 982
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 983 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 1042
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 1043 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 1080
BLAST of Sed0023304 vs. ExPASy TrEMBL
Match:
A0A6J1E5X0 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430871 PE=3 SV=1)
HSP 1 Score: 1754.6 bits (4543), Expect = 0.0e+00
Identity = 840/939 (89.46%), Postives = 890/939 (94.78%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFGRI YARLVFD MP+RNEASWN+MMSGYVRVG +LEA+ FF DICG+G KPSGFV
Sbjct: 1 MYSKFGRIKYARLVFDEMPERNEASWNSMMSGYVRVGSYLEAVSFFRDICGIGVKPSGFV 60
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSS MANEGFQLH +A KCGLIYDVFVGTSFVHFYGSYGIVSNAQKMF+EM
Sbjct: 61 IASLVTACNKSSCMANEGFQLHCFAFKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFNEM 120
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE+VINTY+RMR EGICCNENNIALV+SSCGFLVDVLLGH
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKEEVINTYKRMRREGICCNENNIALVVSSCGFLVDVLLGH 180
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG V+KFGLETKVSAANSLI MF GCG+I+EACSIFNEMNERDTISWNSIISANAQNA
Sbjct: 181 QLLGHVLKFGLETKVSAANSLISMFSGCGDIDEACSIFNEMNERDTISWNSIISANAQNA 240
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
LHEESFRYFY MR +HEEIN TTLSILLSICGS+DYLKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 241 LHEESFRYFYWMRSIHEEINDTTLSILLSICGSLDYLKWGKGVHGLVVKYGLEPNICLCN 300
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL+MYSDAGRS+DAE+IF RM E+D+ISWNSMLACY QDGR LCAL VF+EMLW+KKEI
Sbjct: 301 TLLSMYSDAGRSEDAEMIFRRMPERDVISWNSMLACYAQDGRFLCALNVFAEMLWMKKEI 360
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDPEFL+EGKILHG VI+LGLQD LIIGNTLITFYGKCHKM+EAK+L
Sbjct: 361 NYVTFTSALAACLDPEFLTEGKILHGSVIVLGLQDDLIIGNTLITFYGKCHKMAEAKKLL 420
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRMPKHDKVTWNALIGG+A+N EPNEAVAAFKLMR+GGT +DYITIV+ LGSCLT EDL
Sbjct: 421 QRMPKHDKVTWNALIGGFADNAEPNEAVAAFKLMREGGTCGVDYITIVNTLGSCLTNEDL 480
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG IHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 481 IKYGRPIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 540
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEEALKLV RMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGST+KLGFE
Sbjct: 541 ANARYGFGEEALKLVVRMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTLKLGFEC 600
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDAL++LP+PTDRSRLSWNTLIS+FARHGHFHKARETFHEML
Sbjct: 601 DHFVINAAMDMYGKCGELDDALKVLPRPTDRSRLSWNTLISVFARHGHFHKARETFHEML 660
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ +KPDHVSF+CLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL
Sbjct: 661 KLGIKPDHVSFICLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE FI +MP+PPND VWRSLLASC+I+ NLDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 721 VEAEAFIADMPIPPNDLVWRSLLASCRIYCNLDLGRKAAENLLELDPSDDSAYVLYSNVF 780
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIGRW DVEDVRGQMGA+KIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN KLLELM
Sbjct: 781 ATIGRWKDVEDVRGQMGARKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINDKLLELM 840
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGT VRIFKNLRVCG
Sbjct: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTTVRIFKNLRVCG 900
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKIVLRDPYRFHHFTDGNCSCSDYW
Sbjct: 901 DCHSFFKFVSGILGRKIVLRDPYRFHHFTDGNCSCSDYW 938
BLAST of Sed0023304 vs. ExPASy TrEMBL
Match:
A0A6J1D755 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017668 PE=3 SV=1)
HSP 1 Score: 1732.2 bits (4485), Expect = 0.0e+00
Identity = 829/939 (88.29%), Postives = 887/939 (94.46%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MYSKFG+INYA+ VFDGMP++NEASWNNMMSGYVRVGL++EAMLFF DIC +G +PSGFV
Sbjct: 143 MYSKFGQINYAQFVFDGMPEKNEASWNNMMSGYVRVGLYVEAMLFFRDICEIGIQPSGFV 202
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTACNKSSSMANEGFQLHG+A+K GLIYD+FVGTSFVHFYGSYGIVSNAQ +F+EM
Sbjct: 203 IASLVTACNKSSSMANEGFQLHGFAIKSGLIYDIFVGTSFVHFYGSYGIVSNAQNLFNEM 262
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMVSYS+ GSKE VINTYQRMRHEGICCNENNIAL ISSCGFLV+ LLGH
Sbjct: 263 PDRNVVSWTSLMVSYSDNGSKEQVINTYQRMRHEGICCNENNIALAISSCGFLVNTLLGH 322
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
QLLG VIKFGLETKVSAAN+LI MFGGCG+I+EAC+IFN+MNERDTISWNSIISANAQNA
Sbjct: 323 QLLGHVIKFGLETKVSAANALISMFGGCGDIDEACNIFNQMNERDTISWNSIISANAQNA 382
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
L+EE FRYF MR VHEEINYTTLSILLS+CGSVD+LKWGKG+HGLVVKYGLEPNICLCN
Sbjct: 383 LYEEPFRYFCWMRSVHEEINYTTLSILLSVCGSVDFLKWGKGVHGLVVKYGLEPNICLCN 442
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLLNMYS AGRS+DAELIF RM EKDLISWNSMLACYVQDGR LCALKVF+EMLW+KKEI
Sbjct: 443 TLLNMYSAAGRSEDAELIFRRMPEKDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 502
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+CLDPEFL EGKILH FVI+LGLQD LIIGNTLITFYGKCHKM+EAK+LF
Sbjct: 503 NYVTFTSALAACLDPEFLDEGKILHSFVIVLGLQDNLIIGNTLITFYGKCHKMAEAKKLF 562
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
QRM KHDKVTWN L+GG+A+N EPNEAVAAFKLMR+GGT D+DYITIV+ LGSCLT EDL
Sbjct: 563 QRMSKHDKVTWNTLMGGFADNSEPNEAVAAFKLMREGGTCDVDYITIVNTLGSCLTKEDL 622
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
+KYG AIHAHTVVTGFDLD QHVQSSLITMYAKCGD SSSY+FDKLVFKTSSVWNAIIT
Sbjct: 623 IKYGTAIHAHTVVTGFDLD-QHVQSSLITMYAKCGDLHSSSYIFDKLVFKTSSVWNAIIT 682
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANARYGFGEE LKLV RMR AGIEFDQFNFS ALSVAADLAMLEEGQQLHGSTIKLGFEF
Sbjct: 683 ANARYGFGEEGLKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFEF 742
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
DHFV+NAAMDMYGKCGELDDALRILPQPT+RSRLSWNTLISIFARHGHF KARETFHEML
Sbjct: 743 DHFVVNAAMDMYGKCGELDDALRILPQPTNRSRLSWNTLISIFARHGHFQKARETFHEML 802
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
K+ VKPD VSFVCLLSACSHGGLVDEGLA+YASMTSEYGIQPGIEHCVCM+DLLGRSGRL
Sbjct: 803 KLGVKPDRVSFVCLLSACSHGGLVDEGLAFYASMTSEYGIQPGIEHCVCMVDLLGRSGRL 862
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
VEAE+FI EMP+PPND VWRSLLASC+I+R+LDLGRKAAE L ELDPSDDSAYVLYSNVF
Sbjct: 863 VEAESFIREMPIPPNDLVWRSLLASCRIYRDLDLGRKAAECLLELDPSDDSAYVLYSNVF 922
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
ATIG+W DVEDVRG+MGA KIQKKPAHSWVKWKGNISIFGMGDQTH QT++IN KL+ELM
Sbjct: 923 ATIGKWKDVEDVRGRMGANKIQKKPAHSWVKWKGNISIFGMGDQTHLQTNRINDKLIELM 982
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
KMVREAGYVPDTSY+LQDTDEEQKEHNMWNHSERIALAFGLINIP+ + VRIFKNLRVCG
Sbjct: 983 KMVREAGYVPDTSYALQDTDEEQKEHNMWNHSERIALAFGLINIPQSSTVRIFKNLRVCG 1042
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHSFFKF SGILGRKI+LRDPYRFHHFTDGNCSCSDYW
Sbjct: 1043 DCHSFFKFVSGILGRKIILRDPYRFHHFTDGNCSCSDYW 1080
BLAST of Sed0023304 vs. TAIR 10
Match:
AT1G16480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 565/939 (60.17%), Postives = 715/939 (76.14%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFV 60
MY+KFGR+ AR +FD MP RNE SWN MMSG VRVGL+LE M FF +C +G KPS FV
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 61 IASLVTACNKSSSMANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEM 120
IASLVTAC +S SM EG Q+HG+ K GL+ DV+V T+ +H YG YG+VS ++K+F EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 121 PDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGH 180
PDRNVVSWTSLMV YS+KG E+VI+ Y+ MR EG+ CNEN+++LVISSCG L D LG
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 181 QLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNA 240
Q++GQV+K GLE+K++ NSLI M G GN++ A IF++M+ERDTISWNSI +A AQN
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 241 LHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCN 300
EESFR F MR H+E+N TT+S LLS+ G VD+ KWG+G+HGLVVK G + +C+CN
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 301 TLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEI 360
TLL MY+ AGRS +A L+F +M KDLISWNS++A +V DGR L AL + M+ K +
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 361 NYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLF 420
NYVT TSALA+C P+F +G+ILHG V++ GL IIGN L++ YGK +MSE++R+
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 421 QRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDL 480
+MP+ D V WNALIGGYAE+E+P++A+AAF+ MR G +YIT+VS+L +CL DL
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS-NYITVVSVLSACLLPGDL 480
Query: 481 MKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIIT 540
++ G +HA+ V GF+ D +HV++SLITMYAKCGD SS +F+ L + WNA++
Sbjct: 481 LERGKPLHAYIVSAGFESD-EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 540
Query: 541 ANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEF 600
ANA +G GEE LKLV++MR G+ DQF+FS LS AA LA+LEEGQQLHG +KLGFE
Sbjct: 541 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 600
Query: 601 DHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEML 660
D F+ NAA DMY KCGE+ + +++LP +RS SWN LIS RHG+F + TFHEML
Sbjct: 601 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 660
Query: 661 KMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRL 720
+M +KP HV+FV LL+ACSHGGLVD+GLAYY + ++G++P IEHC+C+IDLLGRSGRL
Sbjct: 661 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 720
Query: 721 VEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVF 780
EAETFI +MPM PND VWRSLLASCKIH NLD GRKAAE L +L+P DDS YVL SN+F
Sbjct: 721 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 780
Query: 781 ATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELM 840
AT GRW DVE+VR QMG K I+KK A SWVK K +S FG+GD+TH QT +I KL ++
Sbjct: 781 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 840
Query: 841 KMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCG 900
K+++E+GYV DTS +LQDTDEEQKEHN+WNHSER+ALA+ L++ PEG+ VRIFKNLR+C
Sbjct: 841 KLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICS 900
Query: 901 DCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
DCHS +KF S ++GR+IVLRD YRFHHF G CSC DYW
Sbjct: 901 DCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
BLAST of Sed0023304 vs. TAIR 10
Match:
AT1G16480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1150.6 bits (2975), Expect = 0.0e+00
Identity = 549/914 (60.07%), Postives = 696/914 (76.15%), Query Frame = 0
Query: 18 MPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFVIASLVTACNKSSSMANE 77
MP RNE SWN MMSG VRVGL+LE M FF +C +G KPS FVIASLVTAC +S SM E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 78 GFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEMPDRNVVSWTSLMVSYSN 137
G Q+HG+ K GL+ DV+V T+ +H YG YG+VS ++K+F EMPDRNVVSWTSLMV YS+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 138 KGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGHQLLGQVIKFGLETKVSA 197
KG E+VI+ Y+ MR EG+ CNEN+++LVISSCG L D LG Q++GQV+K GLE+K++
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 198 ANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNALHEESFRYFYRMRLVHE 257
NSLI M G GN++ A IF++M+ERDTISWNSI +A AQN EESFR F MR H+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 258 EINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCNTLLNMYSDAGRSKDAEL 317
E+N TT+S LLS+ G VD+ KWG+G+HGLVVK G + +C+CNTLL MY+ AGRS +A L
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 318 IFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEMLWLKKEINYVTLTSALASCLDPEF 377
+F +M KDLISWNS++A +V DGR L AL + M+ K +NYVT TSALA+C P+F
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 378 LSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLFQRMPKHDKVTWNALIGG 437
+G+ILHG V++ GL IIGN L++ YGK +MSE++R+ +MP+ D V WNALIGG
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 438 YAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDLMKYGMAIHAHTVVTGFD 497
YAE+E+P++A+AAF+ MR G +YIT+VS+L +CL DL++ G +HA+ V GF+
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSS-NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 480
Query: 498 LDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIITANARYGFGEEALKLVAR 557
D +HV++SLITMYAKCGD SS +F+ L + WNA++ ANA +G GEE LKLV++
Sbjct: 481 SD-EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 540
Query: 558 MRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEFDHFVLNAAMDMYGKCGE 617
MR G+ DQF+FS LS AA LA+LEEGQQLHG +KLGFE D F+ NAA DMY KCGE
Sbjct: 541 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 600
Query: 618 LDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEMLKMDVKPDHVSFVCLLSA 677
+ + +++LP +RS SWN LIS RHG+F + TFHEML+M +KP HV+FV LL+A
Sbjct: 601 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 660
Query: 678 CSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRLVEAETFIGEMPMPPNDF 737
CSHGGLVD+GLAYY + ++G++P IEHC+C+IDLLGRSGRL EAETFI +MPM PND
Sbjct: 661 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 720
Query: 738 VWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVFATIGRWNDVEDVRGQMG 797
VWRSLLASCKIH NLD GRKAAE L +L+P DDS YVL SN+FAT GRW DVE+VR QMG
Sbjct: 721 VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMG 780
Query: 798 AKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELMKMVREAGYVPDTSYSLQ 857
K I+KK A SWVK K +S FG+GD+TH QT +I KL ++ K+++E+GYV DTS +LQ
Sbjct: 781 FKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQ 840
Query: 858 DTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCGDCHSFFKFASGILGRKI 917
DTDEEQKEHN+WNHSER+ALA+ L++ PEG+ VRIFKNLR+C DCHS +KF S ++GR+I
Sbjct: 841 DTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRI 900
Query: 918 VLRDPYRFHHFTDG 932
VLRD YRFHHF G
Sbjct: 901 VLRDQYRFHHFERG 912
BLAST of Sed0023304 vs. TAIR 10
Match:
AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 587.8 bits (1514), Expect = 1.5e-167
Identity = 343/957 (35.84%), Postives = 528/957 (55.17%), Query Frame = 0
Query: 2 YSKFGRINYARLVFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFVI 61
Y + G AR VFD MP RN SW ++SGY R G H EA++F D+ G + +
Sbjct: 46 YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105
Query: 62 ASLVTACNKSSSMA-NEGFQLHGYAMKCGLIYDVFVGTSFVHFYGS-YGIVSNAQKMFSE 121
S++ AC + S+ G Q+HG K D V + Y G V A F +
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 122 MPDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNI-ALVISSCGFL-VDVL 181
+ +N VSW S++ YS G + + M+++G E +LV ++C DV
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVR 225
Query: 182 LGHQLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANA 241
L Q++ + K GL T + + L+ F G+++ A +FN+M R+ ++ N ++
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 242 QNALHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDY-------LKWGKGLHGLVVKY 301
+ EE+ + F M + I+ + S ++ + +Y LK G+ +HG V+
Sbjct: 286 RQKWGEEATKLFMDM---NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 345
Query: 302 GL-EPNICLCNTLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKV 361
GL + + + N L+NMY+ G DA +F M++KD +SWNSM+ Q+G + A++
Sbjct: 346 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 405
Query: 362 FSEMLWLKKEINYVTLTSALASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGK 421
+ M TL S+L+SC ++ G+ +HG + LG+ + + N L+T Y +
Sbjct: 406 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 465
Query: 422 CHKMSEAKRLFQRMPKHDKVTWNALIGGYAENEEP-NEAVAAFKLMRKGGTHDIDYITIV 481
++E +++F MP+HD+V+WN++IG A +E EAV F ++ G ++ IT
Sbjct: 466 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG-QKLNRITFS 525
Query: 482 SILGSCLTCEDLMKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLV 541
S+L S ++ + G IH + D+ +++LI Y KCG+ +F ++
Sbjct: 526 SVL-SAVSSLSFGELGKQIHGLALKNNI-ADEATTENALIACYGKCGEMDGCEKIFSRMA 585
Query: 542 FKTSSV-WNAIITANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQ 601
+ +V WN++I+ +AL LV M + G D F ++ LS A +A LE G
Sbjct: 586 ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM 645
Query: 602 QLHGSTIKLGFEFDHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHG 661
++H +++ E D V +A +DMY KCG LD ALR R+ SWN++IS +ARHG
Sbjct: 646 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 705
Query: 662 HFHKARETFHEMLKMD--VKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIE 721
+A + F E +K+D PDHV+FV +LSACSH GL++EG ++ SM+ YG+ P IE
Sbjct: 706 QGEEALKLF-ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIE 765
Query: 722 HCVCMIDLLGRSGRLVEAETFIGEMPMPPNDFVWRSLLASC--KIHRNLDLGRKAAERLF 781
H CM D+LGR+G L + E FI +MPM PN +WR++L +C R +LG+KAAE LF
Sbjct: 766 HFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF 825
Query: 782 ELDPSDDSAYVLYSNVFATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGD 841
+L+P + YVL N++A GRW D+ R +M ++K+ +SWV K + +F GD
Sbjct: 826 QLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD 885
Query: 842 QTHSQTDQINTKLLELMKMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLIN 901
++H D I KL EL + +R+AGYVP T ++L D ++E KE + HSE++A+AF L
Sbjct: 886 KSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAA 945
Query: 902 IPEGT-AVRIFKNLRVCGDCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
T +RI KNLRVCGDCHS FK+ S I GR+I+LRD RFHHF DG CSCSD+W
Sbjct: 946 QRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
BLAST of Sed0023304 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 575.5 bits (1482), Expect = 7.9e-164
Identity = 305/928 (32.87%), Postives = 507/928 (54.63%), Query Frame = 0
Query: 14 VFDGMPKRNEASWNNMMSGYVRVGLHLEAMLFFLDICGMGTKPSGFVIASLVTACNKSSS 73
VFD MP+R +WN M+ L E F+ + P+ + ++ AC S
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 74 MANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQKMFSEMPDRNVVSWTSLMV 133
+ Q+H + GL V + Y G V A+++F + ++ SW +++
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 134 SYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLVDVLLGHQLLGQVIKFGLET 193
S + + I + M GI + V+S+C + + +G QL G V+K G +
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 194 KVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIISANAQNALHEESFRYFYRMR 253
N+L+ ++ GN+ A IF+ M++RD +++N++I+ +Q E++ F RM
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 254 LVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEPNICLCNTLLNMYSDAGRSK 313
L E + TL+ L+ C + L G+ LH K G N + LLN+Y+ +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 314 DAELIFSRMSEKDLISWNSMLACY--VQDGRHLCALKVFSEMLWLKKEINYVTLTSALAS 373
A F ++++ WN ML Y + D R+ + ++F +M + N T S L +
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRN--SFRIFRQMQIEEIVPNQYTYPSILKT 501
Query: 374 CLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKMSEAKRLFQRMPKHDKVTW 433
C+ L G+ +H +I Q + + LI Y K K+ A + R D V+W
Sbjct: 502 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 561
Query: 434 NALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGSCLTCEDLMKYGMAIHAHT 493
+I GY + ++A+ F+ M G D + + + + +C + L K G IHA
Sbjct: 562 TTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQAL-KEGQQIHAQA 621
Query: 494 VVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSSVWNAIITANARYGFGEEA 553
V+GF D Q++L+T+Y++CG + S F++ + WNA+++ + G EEA
Sbjct: 622 CVSGFSSDLP-FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 681
Query: 554 LKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGSTIKLGFEFDHFVLNAAMDM 613
L++ RM R GI+ + F F +A+ A++ A +++G+Q+H K G++ + V NA + M
Sbjct: 682 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 741
Query: 614 YGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKARETFHEMLKMDVKPDHVSF 673
Y KCG + DA + + + ++ +SWN +I+ +++HG +A ++F +M+ +V+P+HV+
Sbjct: 742 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 801
Query: 674 VCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDLLGRSGRLVEAETFIGEMP 733
V +LSACSH GLVD+G+AY+ SM SEYG+ P EH VC++D+L R+G L A+ FI EMP
Sbjct: 802 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 861
Query: 734 MPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAYVLYSNVFATIGRWNDVED 793
+ P+ VWR+LL++C +H+N+++G AA L EL+P D + YVL SN++A +W+ +
Sbjct: 862 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 921
Query: 794 VRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQINTKLLELMKMVREAGYVPD 853
R +M K ++K+P SW++ K +I F +GDQ H D+I+ +L K E GYV D
Sbjct: 922 TRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 981
Query: 854 TSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIFKNLRVCGDCHSFFKFASG 913
L + EQK+ ++ HSE++A++FGL+++P + + KNLRVC DCH++ KF S
Sbjct: 982 CFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSK 1041
Query: 914 ILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
+ R+I++RD YRFHHF G CSC DYW
Sbjct: 1042 VSNREIIVRDAYRFHHFEGGACSCKDYW 1064
BLAST of Sed0023304 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 571.2 bits (1471), Expect = 1.5e-162
Identity = 321/946 (33.93%), Postives = 512/946 (54.12%), Query Frame = 0
Query: 1 MYSKFGRINYARLVFDGMPKRNEASWNNMMSGYVR-----VGLHLEAMLFFLDICGMGTK 60
MYSK G + YAR VFD MP R+ SWN++++ Y + V +A L F +
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 61 PSGFVIASLVTACNKSSSM-ANEGFQLHGYAMKCGLIYDVFVGTSFVHFYGSYGIVSNAQ 120
S ++ ++ C S + A+E F HGYA K GL D FV + V+ Y +G V +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESF--HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGK 202
Query: 121 KMFSEMPDRNVVSWTSLMVSYSNKGSKEDVINTYQRMRHEGICCNENNIALVISSCGFLV 180
+F EMP R+VV W ++ +Y G KE+ I+ G+ NE + L+ G
Sbjct: 203 VLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS 262
Query: 181 DVLLGHQLLGQVIKFGLETKVSAANSLIHMFGGCGNINEACSIFNEMNERDTISWNSIIS 240
D GQV F N N+A S+ + I N +S
Sbjct: 263 DA-------GQVKSF-------------------ANGNDASSV------SEIIFRNKGLS 322
Query: 241 ANAQNALHEESFRYFYRMRLVHEEINYTTLSILLSICGSVDYLKWGKGLHGLVVKYGLEP 300
+ + + F M E + T ++L+ VD L G+ +H + +K GL+
Sbjct: 323 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 382
Query: 301 NICLCNTLLNMYSDAGRSKDAELIFSRMSEKDLISWNSMLACYVQDGRHLCALKVFSEML 360
+ + N+L+NMY + A +F MSE+DLISWNS++A Q+G + A+ +F ++L
Sbjct: 383 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 442
Query: 361 WLKKEINYVTLTSAL-ASCLDPEFLSEGKILHGFVIILGLQDALIIGNTLITFYGKCHKM 420
+ + T+TS L A+ PE LS K +H I + + LI Y + M
Sbjct: 443 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 502
Query: 421 SEAKRLFQRMPKHDKVTWNALIGGYAENEEPNEAVAAFKLMRKGGTHDIDYITIVSILGS 480
EA+ LF+R D V WNA++ GY ++ + ++ + F LM K G D+ T+ ++ +
Sbjct: 503 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF-TLATVFKT 562
Query: 481 CLTCEDLMKYGMAIHAHTVVTGFDLDQQHVQSSLITMYAKCGDFQSSSYMFDKLVFKTSS 540
C + G +HA+ + +G+DLD V S ++ MY KCGD ++ + FD +
Sbjct: 563 C-GFLFAINQGKQVHAYAIKSGYDLD-LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 622
Query: 541 VWNAIITANARYGFGEEALKLVARMRRAGIEFDQFNFSAALSVAADLAMLEEGQQLHGST 600
W +I+ G E A + ++MR G+ D+F + ++ L LE+G+Q+H +
Sbjct: 623 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 682
Query: 601 IKLGFEFDHFVLNAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIFARHGHFHKAR 660
+KL D FV + +DMY KCG +DDA + + + +WN ++ A+HG +
Sbjct: 683 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 742
Query: 661 ETFHEMLKMDVKPDHVSFVCLLSACSHGGLVDEGLAYYASMTSEYGIQPGIEHCVCMIDL 720
+ F +M + +KPD V+F+ +LSACSH GLV E + SM +YGI+P IEH C+ D
Sbjct: 743 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 802
Query: 721 LGRSGRLVEAETFIGEMPMPPNDFVWRSLLASCKIHRNLDLGRKAAERLFELDPSDDSAY 780
LGR+G + +AE I M M + ++R+LLA+C++ + + G++ A +L EL+P D SAY
Sbjct: 803 LGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAY 862
Query: 781 VLYSNVFATIGRWNDVEDVRGQMGAKKIQKKPAHSWVKWKGNISIFGMGDQTHSQTDQIN 840
VL SN++A +W++++ R M K++K P SW++ K I IF + D+++ QT+ I
Sbjct: 863 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 922
Query: 841 TKLLELMKMVREAGYVPDTSYSLQDTDEEQKEHNMWNHSERIALAFGLINIPEGTAVRIF 900
K+ ++++ +++ GYVP+T ++L D +EE+KE ++ HSE++A+AFGL++ P T +R+
Sbjct: 923 RKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVI 982
Query: 901 KNLRVCGDCHSFFKFASGILGRKIVLRDPYRFHHFTDGNCSCSDYW 940
KNLRVCGDCH+ K+ + + R+IVLRD RFH F DG CSC DYW
Sbjct: 983 KNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022984381.1 | 0.0e+00 | 89.88 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 ... | [more] |
XP_022984382.1 | 0.0e+00 | 89.88 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 ... | [more] |
XP_022923106.1 | 0.0e+00 | 89.46 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 ... | [more] |
XP_022923099.1 | 0.0e+00 | 89.46 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 ... | [more] |
XP_023551747.1 | 0.0e+00 | 89.24 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 ... | [more] |
Match Name | E-value | Identity | Description | |
Q9FIB2 | 2.2e-166 | 35.84 | Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... | [more] |
Q9SVP7 | 1.1e-162 | 32.87 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
Q9SMZ2 | 2.1e-161 | 33.93 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
Q9M1V3 | 2.0e-156 | 34.80 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
Q9SS60 | 2.4e-149 | 31.97 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1J211 | 0.0e+00 | 89.88 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 ... | [more] |
A0A6J1J531 | 0.0e+00 | 89.88 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 ... | [more] |
A0A6J1E5W6 | 0.0e+00 | 89.46 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 ... | [more] |
A0A6J1E5X0 | 0.0e+00 | 89.46 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 ... | [more] |
A0A6J1D755 | 0.0e+00 | 88.29 | pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Momordic... | [more] |
Match Name | E-value | Identity | Description | |
AT1G16480.1 | 0.0e+00 | 60.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G16480.2 | 0.0e+00 | 60.07 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G09950.1 | 1.5e-167 | 35.84 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G13650.1 | 7.9e-164 | 32.87 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G33170.1 | 1.5e-162 | 33.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |