Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCACAGTTCGCAATTCTTCACTCGAAATCGCCTCAAGTTCAGCTTCCATGCTTGTCTTCAACCAGAATTTCAGCCACATTCTCGAGGAACATGGCCATGGTACCTCAACCACTGGTTCAACAGTTATCATTCTCATCATCATCATCATCCATTGAAATTTCAGGCTGCAGATTCTTCCATTTTCCCAGAAATAGTTTTGGAAATGTTCAATTGAGACGAAATGTTGCTGTTAAATCTCATCTCCCGCTTGTTTCTCCGGATGATCAGTGGGGCAACTTGGCCGTGTTATTCTCCGCAGGAGCCCTCGGTATCTGGTAAACTTTTACAATTTTATTTTTCTTGATTGGATTATTGGAAATTCCGTTAAGGAGAAATTAGTGAAAGTATATTCTGAATGTGTTTATGTGAATGCTTGTTGTTTATGATAGAGTTGTCCAGTGGTCAAGAAGGCCTCGGGGAATTAAAAGGAAATGATTTTAATCCATAATGACTAATTATCTAGAAATTAATTTTCTACCGATTTCTTTGACTTCCAAATGTTGCGGGGTAATGCAGTATGTCTTTGTGACATTAGTGAGTGTGTGCAACAACAACTTGGCCTTTTGTTTTTAGCCTAATTTTGTGCCTTTTGTTTTTGTTTCTTTTCTGTGTTTAGTTTACGATTGAATTTCTAATCCAATCTTGCACTTGCTTTTGTTGAATAATTTTTTTGGGGGGACCATATCTCAAACACCAATTGGTAACGAGGGGTTATTAGATAGTATGAGGTTCTATCTCAAAATTAATTGGCAATGAGGAGATTAGCTCACATATATTATAAATCTGTCGAAGATTCCTTGTGGGATAAAATAAGTATCTTCAACTGGGATCATTATGGATGCTATGCACTTTAATATTTACAACAACACTAGAAGGACTTTATTTGACCACTTAGTCGATCCATGATTGTTAGATTGTTGGTGTTTTTTTTTAAATAGAAACATTTCATTGATATTATGAAATATGGGAACAAGTCTCATTCCGAGAAGGGTTTACAAAATATAGTTGCCAATTAGCAATGAAGGAAGATAAATTATAGCTAGAAAGAGAGGGCATAGCCGCATAGATTTGCACCAAAAATATGTAGATGGCAGTGTTAACTCAAAAAGATGGTCCGTTATCTTAGCGACGCCTTTAAAAATATGATTGTTCCGTTCGGTCTATGTCAACCATAAGAACGACCTACAAAAGGCTAACCAAAAAAGCTTTTGATTCCCATGGAAAGGGTGTCCCACAAGGATGATTGACAGGAAAGTGTTTATATCATTTGGAAGGATCATTGACCGGCCAATGTTATACAAAGTATCACGTGTAAGTGCAACTGCACAATGGATGAACAAATGTGATTGGCATTGTCCATCGGTTTTGCACATAACACACCAGCCGGGAGATAAGTTCATATATGGCATCCATCTTTGTAGTCTATCAATAGTATTAATTGCGCCTTTACTCAACTCCCAAGTCCCAAATGAAGATCTTGACTCTTTTTTTTATAATAGTCTTTCCAAATTTCCTTAGACAAACAAGAAACGATTTGGCCACTATTTCCAAGCAAGCTTGTTACAAATGACCTTACTGAGAAATTATTTGTGGTGTCAAGTGACCAATTCCAAGAATCAAGTGAATCGTGGAAATTGAGACGATCCAAATAGGTAGAGAGGGACACCCATTGAGCGGGTTAGATCATTGATGTTGTTAATGGGCAGTCTATGACTAGTTTAGCACAAATTTTCCAATGGTGGCCTTCTAGCGGGTTAGTAGCCAAACCAGGCTGTAGGTTGTCTCGAGATTGAAATTTAGCGAAGGAAACTTGGGAACATATTTAAGATTTTTGTAGCCACATTCTTACAATATTATAAATTAGAGAACTTTTGGATGTCAAACTTCTGAGATTAGAGGAGATGCAAGTTATTATGTACACATAAAGGAAAAATTTGGCAATGACAGGATTTAGTCTTGATTCTTTAGAATGTATAGAATATTATGAATAAAATTTTGGACCTTTTATGTTAATAGTTTTTATTGTTTTCTTTAAATTGAAGGTCCGAGGAAACAAAGATTGGTAGTGCACTAAGTGGTGCTCTAGTGAGCATATTGCTAGGACTTGCCGCTAGTAATTTTGGGATCATTGCATCTGATGCTTCAGCTTTTCCAATTGTTATGGAGTTTTTGCTACCGTTAGCAGTTCCTTTGCTGCTATTTAGAGCACATTTGCGTCATGTAATAAAGTCTACTTGGACAATTCTCTTGGCATTTTTGTTAGGTTCAGGTAATGCTCCTCATGAAAACTACGGCCTCGTTGATAACCATTTGGTTTTTTGTTTTTCGTTTTTGAAATTTAAGACTACAACAACTATCTTACCATATCTTTTTTCTTACTTAGATATCTACCTCTCACTTATATTTGTAAAAACCGAATTAAAATTTGGAAACAAAAAAAGTAGCTTCCAAAAATTTGTTTTTGTTTTTAAAAGTTGGTTATTATTCACCTACTTTCTTAAGAAAAGATGAATACATTTGTAGGAAAGGTGAAACACATTGTAGAAAATTTGAGTAAGAACAGACTTAAATTTTAAAAACTAAAAACAAAAAACCAAATGATTACCAAACGGGGCTACATGATCTCATTGTGAGTTTTTGGTTCTCAAATCTTATTAATCAGTGTCATGTTGATTAGATCTTTATGAGCCATTGTGACTTAGTGGGAATGATGTAATCATTAAAGTATTATTTGAACGACTGGTTTTCTTTTTCTTGACTTTGGGAAATGCTATGTACTTTGGAACCCTCTTCTTAACTGATATATGCAAATCAGTTTGCGAGAATAACCACTATACAAAGTATGACCGCCTCCCAATAGAGTTTTTTGTTAAATTTAAATTTAGATTATCAACTAAAAATTATGGTAGAACAATTCATGAATACTAATACATGGTCACTTAGTAGATATGAGTGTTTATAATTTGAATCTCAAATATGTTCAATCTATGGTGGCCACTCATTTAAGAATTATATATGATGGGTTTCCTTGGCATCCGAATGTTGTAGGGTCAGGTGGTATGTTCTGTGAGAATAGTTGAGGTGTGCGTAAACTGACCTAAACACCCATAAATTAAAAAAAAAATCTTAATTATGTTTATCATTTGACCTTTATGTGGCCACGACACTTTTAGTTACTAATGGTGATATTTTATATTTGTGGATTAGGTTGATGTCCAACAAATTACATTGGTTGTTAATCTTATAAGTTATCTTCAAACAGTAGATTCAAACATTAGATTCTTTTTTGGAGGTTGGTGGTTCAAATTCCCGCACCCCAATTATGGTTGAACTCAAAACATTAGGTTCTTTTCAGTCAATATTCTATCACACCATGTAGGATCATGATATGATCCAGGATCTAGATTATATCAAAAGATAACAAATTACAAGATAAGCCAAGTTTTGATAGGAACAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATATTTGGATGTCTAAACCCTAACCTAACCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGTCCTAGGCCCAACCTTATCAATACCCACCCCTTTAAAGCACATTGTCCTCAAGGTGGGCATACACAAAAATAGAAAAATAAAAATTGTTGGTTTTTTTTTTTTTTTTCCTGGCGGCAGCAGCGGCGATTGCTGCAGCGGCGCGTCAGTGGTGGAGGCGGCGGTGACGGAGGTGGTGGCGATGGCGGTAGCGGCAACACTGGTGGTGGTGGCGGCGGCAGTGTCGGAGGTGGCGACGGCGGCGATGTTAGAGGTGGTGGCCGCGGCAGCAGCGCCGCAGGTGGGGTTGGTGATGGCAGCGGAGGTGAGGGCAACGGCGGTGGCAGAGGCGGAGGCGGAGGCGGAGGCGGCGGCCACAATGTCGGAGGTGGTGGCAGTGATGGTGGTGATAGTGGCAGCTTCAAAACCCTAGCCGTCGTTGTTTTTTCCAATATAATTTCTTTGCTCTCTCTAAAACACTTTTTTAGGTCATTGAAACTCTCCTTTAGGTCTTCTCTAATTTCTTTTTTTAGAGAAGCTACCTCTTCTCTGAGGTCTTTTTTCAAGTTCACCATCAAACTTTGCAACTCTTCTTGAATGAAACGAAGAACTTCTTGATCCATCTCTACAACCAAGAATCGAACAGCTCTGATACCAATTGATATGATCCAGGATCTAGATTATATCAAAAGATAACAAATTACAAGATAAGCCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATATTTGGATGTCTAAACCCTAACCTAACCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGTCCTAGGCCCAACCTTATCAGATCATCTTGACGAGCTCGGTTGTTATTCTCTTTCTTTGGATAGTTGGAACAACAATTGGAACTTCAGTGGCATATTCTTTGGTACCAATGCGAACACTTGGTCGAGATAGTTGGAAAATTGCCGCCGCACTAATGGGAATGCGTATTGGTGGAGGTTATGTTCTTTCTTCATCTCATCTTCAAGTATTTAGGCGGTTTCAATTGCAAGTGACGCATTGGGTCATTGAACTACTATTTTTTTAGTTTTCTATCTTCTGATAGATGTTTTGTTCTTTGTTTTTGGGTGCAGCCTTCAATTATGTTGGTATATCTGATTTTTTTGACATTTCATCGTCCGCATTTGCTGCTGGACTTGCTGTAGATAAAGTAATTTGTGCACTGTATTTTGCAACATTGTTCACATTAGCATCAAAAGAACTTCCTGAAACTACAAGAAGAAATGGTACGTACATGTGATTTCATTTTCTCAGCCCCAATAATTTTCTACAGATTTTCGTATATTGTAGGAATTTTTGGGATTATCTTGTGTTGTGTGGGGTCAGTTTCATAGGATAAACTAAAATTTTCAGAACTATATTACCAAGCATTGAAAAATTAAGCCTTTTATTGAAGTTCTGTGTAGGGTAGATGTTGAGAAGGATACAGAGACGGAGTACAACAACAAGCTTCTAGTATTACAGGCTGCCACTTCCCTTGCTGTGTCATTTGCCATTTGTAAAATTGGTTCCTATATGACCAAATATTTTGAGATTCCAGGTGGTAGCATCCCAGCAATTACGATCGTTATTGTTGTCGTAACAGCAATTTTTCCCAAGTCGTTTGCTTACCTTGCTCCTTCTGCTGAGGCTATAGCTATGTTTATAATGCAGGTATATTTGCTATGCAAATCCATTAACTTTTCATGCTTTACCTTTACACTAATTTCTTTAGATTTGGTATCTATACAATTCTATTTTGAATGACTTATGTTGGCACACGGTTTCATCGTGGTCTCTTTAAGATTTCCCTCCCATCTATGGTAGAGATATCTAGTGTGGCCAATGTTTGTATTAATGGAAAAATACCCATTTTAAGAGCTTAGTTTTCACATTCATACACTTTTGTCCATACTTCCTTCTACATTTATTTATTTATTCATTCATTATTAGTACTGTTTTTTTTTTGTTAAGAAACAATTGTTTTGATATGTAAAATTACAAAAAGAGGGACTAAATATCCAAAGGGAGAGATACAAAAAAGCACTCACCTATAGTATAGGATGAGAGTTACAAAAGGGCACCCCTATTTGCAATGAGGCTAGTCCCCAAGAGGTGGCACAATGGTTGAAGACTTGAGTTTTGAAAGTGTGCTCCTCCCAACGTTTTAGGTTCGAGATTCACCTGTAGATACTTCTAGTGTCTCCATTCCATCGATGTCTCTCGGTGTCTAAGGGACGGGCGTGGTTACCGTTGTTTCAAAAAAAAAAAAAAATTGAAATGAGGGTAGATAAACTATAATGAGCAAATAAAGAAATTCTCCCAAAGAATCTTCCTTTTCCTTTATGAAAGTATGACCCATGAGAGACATGGAGAGGAATTCTTGCATAGTCTGTGGCTGTGGGTAAACCCCTCTAAATGTCCATCCCACAAAATCCCACAAACCAGAAAAGAAAGGGCAGTGCAGCATAATGTGGCTAAGAGACATAGAATTGTTTTCCCTTGTACTAATCACCAAATAAAAAATTCACAATGATTTTATTGAAAACTAAGCACAAAGAGGTTCATCCCTCCTCACTCTTGAGTCCTAGACAAAAATTTTAGTCTGCTTCCAATGATAAAACTTAATGCATGTGCAATTTGTAGGTTATCCACATATTTTGAAATTTTTACTCTTACATCGTCTCGAGACAGGTTTTCTTTGTTGTAGTAGGAGCAAGGGTAAATATATGGAGTGTCGTCAACACTGCACCGAGTATCTTCGTATTTTCTCTTGTCCAGACTGCAGTCCATCTCGCCATAACCATTGGTCTCGGAAAACTTCTTCACTTCGACATGAAGTCGTTGTTGATAGCCTCCAATGCCAACATTGTAGACCCCACTACAGCCTGCGTGATGGCCGCAAATAAGGGTTGGAGTTCAATGACTATTCCGGTAATTCTTGTTGGGTTTCTAGGAAGGGCTATTGCAACGTTCCCTAGCATTGTATTAGGATTGATATTAAAATACATATGA
mRNA sequence
ATGGCTTCACAGTTCGCAATTCTTCACTCGAAATCGCCTCAAGTTCAGCTTCCATGCTTGTCTTCAACCAGAATTTCAGCCACATTCTCGAGGAACATGGCCATGGTACCTCAACCACTGGTTCAACAGTTATCATTCTCATCATCATCATCATCCATTGAAATTTCAGGCTGCAGATTCTTCCATTTTCCCAGAAATAGTTTTGGAAATGTTCAATTGAGACGAAATGTTGCTGTTAAATCTCATCTCCCGCTTGTTTCTCCGGATGATCAGTGGGGCAACTTGGCCGTGTTATTCTCCGCAGGAGCCCTCGGTATCTGGTCCGAGGAAACAAAGATTGGTAGTGCACTAAGTGGTGCTCTAGTGAGCATATTGCTAGGACTTGCCGCTAGTAATTTTGGGATCATTGCATCTGATGCTTCAGCTTTTCCAATTGTTATGGAGTTTTTGCTACCGTTAGCAGTTCCTTTGCTGCTATTTAGAGCACATTTGCGTCATGTAATAAAGTCTACTTGGACAATTCTCTTGGCATTTTTGTTAGGTTCAGTTGGAACAACAATTGGAACTTCAGTGGCATATTCTTTGGTACCAATGCGAACACTTGGTCGAGATAGTTGGAAAATTGCCGCCGCACTAATGGGAATGCGTATTGGTGGAGCCTTCAATTATGTTGGTATATCTGATTTTTTTGACATTTCATCGTCCGCATTTGCTGCTGGACTTGCTGTAGATAAAGTAATTTGTGCACTGTATTTTGCAACATTGTTCACATTAGCATCAAAAGAACTTCCTGAAACTACAAGAAGAAATGATGTTGAGAAGGATACAGAGACGGAGTACAACAACAAGCTTCTAGTATTACAGGCTGCCACTTCCCTTGCTGTGTCATTTGCCATTTGTAAAATTGGTTCCTATATGACCAAATATTTTGAGATTCCAGGTGGTAGCATCCCAGCAATTACGATCGTTATTGTTGTCGTAACAGCAATTTTTCCCAAGTCGTTTGCTTACCTTGCTCCTTCTGCTGAGGCTATAGCTATGTTTATAATGCAGGTTTTCTTTGTTGTAGTAGGAGCAAGGGTAAATATATGGAGTGTCGTCAACACTGCACCGAGTATCTTCGTATTTTCTCTTGTCCAGACTGCAGTCCATCTCGCCATAACCATTGGTCTCGGAAAACTTCTTCACTTCGACATGAAGTCGTTGTTGATAGCCTCCAATGCCAACATTGTAGACCCCACTACAGCCTGCGTGATGGCCGCAAATAAGGGTTGGAGTTCAATGACTATTCCGGTAATTCTTGTTGGGTTTCTAGGAAGGGCTATTGCAACGTTCCCTAGCATTGTATTAGGATTGATATTAAAATACATATGA
Coding sequence (CDS)
ATGGCTTCACAGTTCGCAATTCTTCACTCGAAATCGCCTCAAGTTCAGCTTCCATGCTTGTCTTCAACCAGAATTTCAGCCACATTCTCGAGGAACATGGCCATGGTACCTCAACCACTGGTTCAACAGTTATCATTCTCATCATCATCATCATCCATTGAAATTTCAGGCTGCAGATTCTTCCATTTTCCCAGAAATAGTTTTGGAAATGTTCAATTGAGACGAAATGTTGCTGTTAAATCTCATCTCCCGCTTGTTTCTCCGGATGATCAGTGGGGCAACTTGGCCGTGTTATTCTCCGCAGGAGCCCTCGGTATCTGGTCCGAGGAAACAAAGATTGGTAGTGCACTAAGTGGTGCTCTAGTGAGCATATTGCTAGGACTTGCCGCTAGTAATTTTGGGATCATTGCATCTGATGCTTCAGCTTTTCCAATTGTTATGGAGTTTTTGCTACCGTTAGCAGTTCCTTTGCTGCTATTTAGAGCACATTTGCGTCATGTAATAAAGTCTACTTGGACAATTCTCTTGGCATTTTTGTTAGGTTCAGTTGGAACAACAATTGGAACTTCAGTGGCATATTCTTTGGTACCAATGCGAACACTTGGTCGAGATAGTTGGAAAATTGCCGCCGCACTAATGGGAATGCGTATTGGTGGAGCCTTCAATTATGTTGGTATATCTGATTTTTTTGACATTTCATCGTCCGCATTTGCTGCTGGACTTGCTGTAGATAAAGTAATTTGTGCACTGTATTTTGCAACATTGTTCACATTAGCATCAAAAGAACTTCCTGAAACTACAAGAAGAAATGATGTTGAGAAGGATACAGAGACGGAGTACAACAACAAGCTTCTAGTATTACAGGCTGCCACTTCCCTTGCTGTGTCATTTGCCATTTGTAAAATTGGTTCCTATATGACCAAATATTTTGAGATTCCAGGTGGTAGCATCCCAGCAATTACGATCGTTATTGTTGTCGTAACAGCAATTTTTCCCAAGTCGTTTGCTTACCTTGCTCCTTCTGCTGAGGCTATAGCTATGTTTATAATGCAGGTTTTCTTTGTTGTAGTAGGAGCAAGGGTAAATATATGGAGTGTCGTCAACACTGCACCGAGTATCTTCGTATTTTCTCTTGTCCAGACTGCAGTCCATCTCGCCATAACCATTGGTCTCGGAAAACTTCTTCACTTCGACATGAAGTCGTTGTTGATAGCCTCCAATGCCAACATTGTAGACCCCACTACAGCCTGCGTGATGGCCGCAAATAAGGGTTGGAGTTCAATGACTATTCCGGTAATTCTTGTTGGGTTTCTAGGAAGGGCTATTGCAACGTTCCCTAGCATTGTATTAGGATTGATATTAAAATACATATGA
Protein sequence
MASQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRFFHFPRNSFGNVQLRRNVAVKSHLPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSALSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILLAFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSAFAAGLAVDKVICALYFATLFTLASKELPETTRRNDVEKDTETEYNNKLLVLQAATSLAVSFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFVVVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTTACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGLILKYI
Homology
BLAST of Sed0023303 vs. NCBI nr
Match:
XP_038877446.1 (uncharacterized membrane protein YjcL-like [Benincasa hispida])
HSP 1 Score: 582.8 bits (1501), Expect = 2.6e-162
Identity = 332/461 (72.02%), Postives = 368/461 (79.83%), Query Frame = 0
Query: 3 SQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRFFH 62
SQ A LHSKSP Q PCLSS + S FSR +AM PQPL+Q S SSSS EI G RF++
Sbjct: 5 SQLANLHSKSPGAQPPCLSSCKFSVGFSRRIAMAPQPLLQP-SLSSSSLDAEIRGRRFWN 64
Query: 63 FPRNSFGNVQLRRNVAVKSHL----PLVSPDDQWGNLAVLFSAGALGIWSEETKIGSALS 122
F ++S GNVQLRR+VAVKSHL PL+SP DQWGN VLFS GA GIWSE+TKIGSALS
Sbjct: 65 FRKSSTGNVQLRRDVAVKSHLKLNVPLISPHDQWGNWTVLFSIGAFGIWSEKTKIGSALS 124
Query: 123 GALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILLAF 182
GALVS L+GLAASNFGIIASDA AFPIV+EFLLPLAVPLLLFRA LR VIKST T+LLAF
Sbjct: 125 GALVSTLVGLAASNFGIIASDAPAFPIVLEFLLPLAVPLLLFRADLRRVIKSTGTLLLAF 184
Query: 183 LLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSAFA 242
LLGSVGTTIGT VAY LVPMR+LG+DSWKIAAALMG IGGA NYV ISD +S S A
Sbjct: 185 LLGSVGTTIGTVVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISDALGVSPSVLA 244
Query: 243 AGLAVDKVICALYFATLFTLASKELPETT-RRNDVEKDTETEYNNKLLVLQAATSLAVSF 302
AGLA D VICA+YFATLF LASK PETT NDV K E E +NKL VLQ+AT++AVSF
Sbjct: 245 AGLAADNVICAVYFATLFALASKVPPETTILDNDVGKGAEVEPSNKLPVLQSATAIAVSF 304
Query: 303 AICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFVVV 362
AICK+GSY+TKYF I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF VV
Sbjct: 305 AICKVGSYLTKYFGIQGGSMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQVFFAVV 364
Query: 363 GARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTTAC 422
GA NIWSV+NTAPSIF+FS VQ AVHLAI +GLGKLL FD+K LLIASNAN+ PTTAC
Sbjct: 365 GASGNIWSVINTAPSIFIFSFVQIAVHLAIILGLGKLLRFDLKLLLIASNANVGGPTTAC 424
Query: 423 VMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGL-ILKYI 458
MA KGWSSM IP IL G G AIATF I G+ +LKY+
Sbjct: 425 GMATAKGWSSMIIPGILAGIFGIAIATFLGIGFGMVVLKYM 464
BLAST of Sed0023303 vs. NCBI nr
Match:
XP_008439290.1 (PREDICTED: uncharacterized membrane protein YjcL-like [Cucumis melo])
HSP 1 Score: 568.5 bits (1464), Expect = 5.1e-158
Identity = 325/465 (69.89%), Postives = 370/465 (79.57%), Query Frame = 0
Query: 1 MASQ--FAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGC 60
MASQ AILHS SP++Q PC SS++ S FSR++AM P P +Q S SSSS + +I+
Sbjct: 1 MASQSHLAILHSNSPELQPPCFSSSKFSVGFSRSIAMAPHPPLQ--SLSSSSLAAKITCP 60
Query: 61 RFFHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIG 120
RF+ F ++S GNVQ RR+VAVKSH LPLVSP DQWGN VLFS GA GIWSE+TKIG
Sbjct: 61 RFWSFRKSSNGNVQSRRDVAVKSHLKLNLPLVSPQDQWGNWTVLFSIGAFGIWSEKTKIG 120
Query: 121 SALSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTI 180
SALSGALVS L+GLAASNFGIIASDA AF V+EFLLPLAVPLLLFRA LR VIKST T+
Sbjct: 121 SALSGALVSTLVGLAASNFGIIASDAPAFATVLEFLLPLAVPLLLFRADLRRVIKSTGTL 180
Query: 181 LLAFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISS 240
LLAFLLGSVGTT+GT VAY LVPMR+LG+DSWKIAAALMG IGGA NYV ISD +S
Sbjct: 181 LLAFLLGSVGTTVGTVVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISDALGVSP 240
Query: 241 SAFAAGLAVDKVICALYFATLFTLASKELPE-TTRRNDVEKDTETEYNNKLLVLQAATSL 300
S AAGLA D VICA+YFATLF LASK PE TT N VEKD E E +NKL VLQ+A+++
Sbjct: 241 SVLAAGLAADNVICAVYFATLFALASKVPPESTTLDNGVEKDAEVEPSNKLPVLQSASAI 300
Query: 301 AVSFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVF 360
AVSFAICK+GSY+TKYF I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVF
Sbjct: 301 AVSFAICKVGSYLTKYFGIQGGSMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQVF 360
Query: 361 FVVVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDP 420
F VVGA N+WSV+NTAPSIF+F+ VQ +VHLAI IGLGKLL FD+KSLLIASNAN+ P
Sbjct: 361 FAVVGASGNVWSVINTAPSIFIFAFVQISVHLAIIIGLGKLLRFDLKSLLIASNANVGGP 420
Query: 421 TTACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLG-LILKYI 458
TTAC MA KGWSSM IP IL G G AIATF I G ++LKY+
Sbjct: 421 TTACGMATAKGWSSMVIPGILAGIFGIAIATFLGIGFGTMVLKYM 463
BLAST of Sed0023303 vs. NCBI nr
Match:
XP_022140905.1 (uncharacterized protein LOC111011457 isoform X3 [Momordica charantia])
HSP 1 Score: 566.2 bits (1458), Expect = 2.5e-157
Identity = 323/463 (69.76%), Postives = 365/463 (78.83%), Query Frame = 0
Query: 1 MASQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRF 60
MASQ AIL SKSPQ+QLPC SST+ SA F R++ M P+P V + SSSS + EI RF
Sbjct: 335 MASQVAILQSKSPQLQLPCFSSTKSSARFFRSITMAPRPPVPPV--SSSSPAAEIGDRRF 394
Query: 61 FHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSA 120
++FP NS GN LRR +AVKSH LPL+SP DQW N VLFS GA GIWSE+TKIGSA
Sbjct: 395 WNFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSA 454
Query: 121 LSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILL 180
LSGALVS L+GLAASN GIIASDA AFP+V+E LLPL++PLLLFRA LR VIKST T+LL
Sbjct: 455 LSGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLL 514
Query: 181 AFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSA 240
AFLLGSVGT IGT+VAY LVPMR+LG+DSWKIAAALMG IGGA NYV IS +S S
Sbjct: 515 AFLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSV 574
Query: 241 FAAGLAVDKVICALYFATLFTLASKELPETTRRND-VEKDTETEYNNKLLVLQAATSLAV 300
AAGLA D VICA+YFATLF LASK E T +D V KD E E+NNKL VLQ+AT+LAV
Sbjct: 575 LAAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAV 634
Query: 301 SFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFV 360
SFAICK GSY+TK+F I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF
Sbjct: 635 SFAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQVFFT 694
Query: 361 VVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTT 420
VVGA NIWSV+NTAPSIF+FSLVQ AVHLA+TIGLGKLL FD+K LLIASNAN+ PTT
Sbjct: 695 VVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGPTT 754
Query: 421 ACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGLI-LKYI 458
AC MA KGWSSM +P IL G G AIATF I GL+ LKY+
Sbjct: 755 ACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKYM 795
BLAST of Sed0023303 vs. NCBI nr
Match:
XP_022140902.1 (uncharacterized protein LOC111011457 isoform X1 [Momordica charantia])
HSP 1 Score: 566.2 bits (1458), Expect = 2.5e-157
Identity = 323/463 (69.76%), Postives = 365/463 (78.83%), Query Frame = 0
Query: 1 MASQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRF 60
MASQ AIL SKSPQ+QLPC SST+ SA F R++ M P+P V + SSSS + EI RF
Sbjct: 534 MASQVAILQSKSPQLQLPCFSSTKSSARFFRSITMAPRPPVPPV--SSSSPAAEIGDRRF 593
Query: 61 FHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSA 120
++FP NS GN LRR +AVKSH LPL+SP DQW N VLFS GA GIWSE+TKIGSA
Sbjct: 594 WNFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSA 653
Query: 121 LSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILL 180
LSGALVS L+GLAASN GIIASDA AFP+V+E LLPL++PLLLFRA LR VIKST T+LL
Sbjct: 654 LSGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLL 713
Query: 181 AFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSA 240
AFLLGSVGT IGT+VAY LVPMR+LG+DSWKIAAALMG IGGA NYV IS +S S
Sbjct: 714 AFLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSV 773
Query: 241 FAAGLAVDKVICALYFATLFTLASKELPETTRRND-VEKDTETEYNNKLLVLQAATSLAV 300
AAGLA D VICA+YFATLF LASK E T +D V KD E E+NNKL VLQ+AT+LAV
Sbjct: 774 LAAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAV 833
Query: 301 SFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFV 360
SFAICK GSY+TK+F I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF
Sbjct: 834 SFAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQVFFT 893
Query: 361 VVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTT 420
VVGA NIWSV+NTAPSIF+FSLVQ AVHLA+TIGLGKLL FD+K LLIASNAN+ PTT
Sbjct: 894 VVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGPTT 953
Query: 421 ACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGLI-LKYI 458
AC MA KGWSSM +P IL G G AIATF I GL+ LKY+
Sbjct: 954 ACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKYM 994
BLAST of Sed0023303 vs. NCBI nr
Match:
XP_022140906.1 (uncharacterized protein LOC111011457 isoform X4 [Momordica charantia])
HSP 1 Score: 566.2 bits (1458), Expect = 2.5e-157
Identity = 323/463 (69.76%), Postives = 365/463 (78.83%), Query Frame = 0
Query: 1 MASQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRF 60
MASQ AIL SKSPQ+QLPC SST+ SA F R++ M P+P V + SSSS + EI RF
Sbjct: 296 MASQVAILQSKSPQLQLPCFSSTKSSARFFRSITMAPRPPVPPV--SSSSPAAEIGDRRF 355
Query: 61 FHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSA 120
++FP NS GN LRR +AVKSH LPL+SP DQW N VLFS GA GIWSE+TKIGSA
Sbjct: 356 WNFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSA 415
Query: 121 LSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILL 180
LSGALVS L+GLAASN GIIASDA AFP+V+E LLPL++PLLLFRA LR VIKST T+LL
Sbjct: 416 LSGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLL 475
Query: 181 AFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSA 240
AFLLGSVGT IGT+VAY LVPMR+LG+DSWKIAAALMG IGGA NYV IS +S S
Sbjct: 476 AFLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSV 535
Query: 241 FAAGLAVDKVICALYFATLFTLASKELPETTRRND-VEKDTETEYNNKLLVLQAATSLAV 300
AAGLA D VICA+YFATLF LASK E T +D V KD E E+NNKL VLQ+AT+LAV
Sbjct: 536 LAAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAV 595
Query: 301 SFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFV 360
SFAICK GSY+TK+F I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF
Sbjct: 596 SFAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQVFFT 655
Query: 361 VVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTT 420
VVGA NIWSV+NTAPSIF+FSLVQ AVHLA+TIGLGKLL FD+K LLIASNAN+ PTT
Sbjct: 656 VVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGPTT 715
Query: 421 ACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGLI-LKYI 458
AC MA KGWSSM +P IL G G AIATF I GL+ LKY+
Sbjct: 716 ACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKYM 756
BLAST of Sed0023303 vs. ExPASy Swiss-Prot
Match:
O31634 (Uncharacterized membrane protein YjcL OS=Bacillus subtilis (strain 168) OX=224308 GN=yjcL PE=4 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 3.1e-33
Identity = 108/391 (27.62%), Postives = 195/391 (49.87%), Query Frame = 0
Query: 85 LVSPDD---QWGNLAVLFSAGALGIWSEETKIGSALSGALVSILLGLAASNFGIIASDAS 144
L+S DD WG +AV ++A ++G+ + K SA+SGA++++ + +N G++ ++
Sbjct: 4 LISSDDVWVLWGFIAV-WAAVSIGL-EQRFKWASAVSGAIIALAGAMVFTNVGVLPVESP 63
Query: 145 AFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILLAFLLGSVGTTIGTSVAYSLVPMRTL 204
+ V +++PLA+PLLLF+ ++R + K + +L FL+ SVGT +G+ +A+ L+
Sbjct: 64 VYDTVWSYVVPLAIPLLLFQINVRQIFKESRRLLFIFLISSVGTVLGSILAFFLLKQHIP 123
Query: 205 GRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSAFAAGLAVDKVICALYFATLFTLASK 264
D KI + IGG N+ ++ F+ +A + D + AL F L ++ +
Sbjct: 124 YLD--KIGGMISASYIGGGVNFAAMAAKFETPGEYVSATVVADNFMMALLFFILISIPAL 183
Query: 265 ELPETTRRNDVEKDTETEYNN---------------KLLVLQAATSLAVSFAICKIGSYM 324
+ + E+ + + N+ K + A + A+ K+ Y
Sbjct: 184 KWFQRHYAMPFEEKVKADGNSGNSAESYWKRKDISLKDIAFNAGAAFALVAVSMKVSGYF 243
Query: 325 TKYFEIP------GGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFVVVGAR 384
F P G +T + V++ +FP+ F L S E + F++ +FFVV+G
Sbjct: 244 KSIFSHPLLTGTLGDQYLVLTSLTVLIIFLFPRFFERLNGSQE-LGTFLIYLFFVVIGIP 303
Query: 385 VNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTTACVMA 444
++ +V AP I +F + +LA+++ GKL ++ +L+A NA + PTTA MA
Sbjct: 304 ADLRLIVTNAPLILLFVFIIAISNLAVSLAAGKLFRVRLEEILLAVNATVGGPTTAAAMA 363
Query: 445 ANKGWSSMTIPVILVGFLGRAIATFPSIVLG 452
KGW + P++LVG LG I + +G
Sbjct: 364 IAKGWRELVAPIMLVGTLGYLIGNYVGTFMG 389
BLAST of Sed0023303 vs. ExPASy TrEMBL
Match:
A0A1S3AZ41 (uncharacterized membrane protein YjcL-like OS=Cucumis melo OX=3656 GN=LOC103484119 PE=4 SV=1)
HSP 1 Score: 568.5 bits (1464), Expect = 2.4e-158
Identity = 325/465 (69.89%), Postives = 370/465 (79.57%), Query Frame = 0
Query: 1 MASQ--FAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGC 60
MASQ AILHS SP++Q PC SS++ S FSR++AM P P +Q S SSSS + +I+
Sbjct: 1 MASQSHLAILHSNSPELQPPCFSSSKFSVGFSRSIAMAPHPPLQ--SLSSSSLAAKITCP 60
Query: 61 RFFHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIG 120
RF+ F ++S GNVQ RR+VAVKSH LPLVSP DQWGN VLFS GA GIWSE+TKIG
Sbjct: 61 RFWSFRKSSNGNVQSRRDVAVKSHLKLNLPLVSPQDQWGNWTVLFSIGAFGIWSEKTKIG 120
Query: 121 SALSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTI 180
SALSGALVS L+GLAASNFGIIASDA AF V+EFLLPLAVPLLLFRA LR VIKST T+
Sbjct: 121 SALSGALVSTLVGLAASNFGIIASDAPAFATVLEFLLPLAVPLLLFRADLRRVIKSTGTL 180
Query: 181 LLAFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISS 240
LLAFLLGSVGTT+GT VAY LVPMR+LG+DSWKIAAALMG IGGA NYV ISD +S
Sbjct: 181 LLAFLLGSVGTTVGTVVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISDALGVSP 240
Query: 241 SAFAAGLAVDKVICALYFATLFTLASKELPE-TTRRNDVEKDTETEYNNKLLVLQAATSL 300
S AAGLA D VICA+YFATLF LASK PE TT N VEKD E E +NKL VLQ+A+++
Sbjct: 241 SVLAAGLAADNVICAVYFATLFALASKVPPESTTLDNGVEKDAEVEPSNKLPVLQSASAI 300
Query: 301 AVSFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVF 360
AVSFAICK+GSY+TKYF I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVF
Sbjct: 301 AVSFAICKVGSYLTKYFGIQGGSMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQVF 360
Query: 361 FVVVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDP 420
F VVGA N+WSV+NTAPSIF+F+ VQ +VHLAI IGLGKLL FD+KSLLIASNAN+ P
Sbjct: 361 FAVVGASGNVWSVINTAPSIFIFAFVQISVHLAIIIGLGKLLRFDLKSLLIASNANVGGP 420
Query: 421 TTACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLG-LILKYI 458
TTAC MA KGWSSM IP IL G G AIATF I G ++LKY+
Sbjct: 421 TTACGMATAKGWSSMVIPGILAGIFGIAIATFLGIGFGTMVLKYM 463
BLAST of Sed0023303 vs. ExPASy TrEMBL
Match:
A0A6J1CGH1 (uncharacterized protein LOC111011457 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011457 PE=4 SV=1)
HSP 1 Score: 566.2 bits (1458), Expect = 1.2e-157
Identity = 323/463 (69.76%), Postives = 365/463 (78.83%), Query Frame = 0
Query: 1 MASQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRF 60
MASQ AIL SKSPQ+QLPC SST+ SA F R++ M P+P V + SSSS + EI RF
Sbjct: 335 MASQVAILQSKSPQLQLPCFSSTKSSARFFRSITMAPRPPVPPV--SSSSPAAEIGDRRF 394
Query: 61 FHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSA 120
++FP NS GN LRR +AVKSH LPL+SP DQW N VLFS GA GIWSE+TKIGSA
Sbjct: 395 WNFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSA 454
Query: 121 LSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILL 180
LSGALVS L+GLAASN GIIASDA AFP+V+E LLPL++PLLLFRA LR VIKST T+LL
Sbjct: 455 LSGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLL 514
Query: 181 AFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSA 240
AFLLGSVGT IGT+VAY LVPMR+LG+DSWKIAAALMG IGGA NYV IS +S S
Sbjct: 515 AFLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSV 574
Query: 241 FAAGLAVDKVICALYFATLFTLASKELPETTRRND-VEKDTETEYNNKLLVLQAATSLAV 300
AAGLA D VICA+YFATLF LASK E T +D V KD E E+NNKL VLQ+AT+LAV
Sbjct: 575 LAAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAV 634
Query: 301 SFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFV 360
SFAICK GSY+TK+F I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF
Sbjct: 635 SFAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQVFFT 694
Query: 361 VVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTT 420
VVGA NIWSV+NTAPSIF+FSLVQ AVHLA+TIGLGKLL FD+K LLIASNAN+ PTT
Sbjct: 695 VVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGPTT 754
Query: 421 ACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGLI-LKYI 458
AC MA KGWSSM +P IL G G AIATF I GL+ LKY+
Sbjct: 755 ACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKYM 795
BLAST of Sed0023303 vs. ExPASy TrEMBL
Match:
A0A6J1CIC3 (uncharacterized protein LOC111011457 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011457 PE=4 SV=1)
HSP 1 Score: 566.2 bits (1458), Expect = 1.2e-157
Identity = 323/463 (69.76%), Postives = 365/463 (78.83%), Query Frame = 0
Query: 1 MASQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRF 60
MASQ AIL SKSPQ+QLPC SST+ SA F R++ M P+P V + SSSS + EI RF
Sbjct: 534 MASQVAILQSKSPQLQLPCFSSTKSSARFFRSITMAPRPPVPPV--SSSSPAAEIGDRRF 593
Query: 61 FHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSA 120
++FP NS GN LRR +AVKSH LPL+SP DQW N VLFS GA GIWSE+TKIGSA
Sbjct: 594 WNFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSA 653
Query: 121 LSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILL 180
LSGALVS L+GLAASN GIIASDA AFP+V+E LLPL++PLLLFRA LR VIKST T+LL
Sbjct: 654 LSGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLL 713
Query: 181 AFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSA 240
AFLLGSVGT IGT+VAY LVPMR+LG+DSWKIAAALMG IGGA NYV IS +S S
Sbjct: 714 AFLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSV 773
Query: 241 FAAGLAVDKVICALYFATLFTLASKELPETTRRND-VEKDTETEYNNKLLVLQAATSLAV 300
AAGLA D VICA+YFATLF LASK E T +D V KD E E+NNKL VLQ+AT+LAV
Sbjct: 774 LAAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAV 833
Query: 301 SFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFV 360
SFAICK GSY+TK+F I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF
Sbjct: 834 SFAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQVFFT 893
Query: 361 VVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTT 420
VVGA NIWSV+NTAPSIF+FSLVQ AVHLA+TIGLGKLL FD+K LLIASNAN+ PTT
Sbjct: 894 VVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGPTT 953
Query: 421 ACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGLI-LKYI 458
AC MA KGWSSM +P IL G G AIATF I GL+ LKY+
Sbjct: 954 ACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKYM 994
BLAST of Sed0023303 vs. ExPASy TrEMBL
Match:
A0A6J1CHF3 (uncharacterized protein LOC111011457 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111011457 PE=4 SV=1)
HSP 1 Score: 566.2 bits (1458), Expect = 1.2e-157
Identity = 323/463 (69.76%), Postives = 365/463 (78.83%), Query Frame = 0
Query: 1 MASQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRF 60
MASQ AIL SKSPQ+QLPC SST+ SA F R++ M P+P V + SSSS + EI RF
Sbjct: 296 MASQVAILQSKSPQLQLPCFSSTKSSARFFRSITMAPRPPVPPV--SSSSPAAEIGDRRF 355
Query: 61 FHFPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSA 120
++FP NS GN LRR +AVKSH LPL+SP DQW N VLFS GA GIWSE+TKIGSA
Sbjct: 356 WNFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSA 415
Query: 121 LSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILL 180
LSGALVS L+GLAASN GIIASDA AFP+V+E LLPL++PLLLFRA LR VIKST T+LL
Sbjct: 416 LSGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLL 475
Query: 181 AFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSA 240
AFLLGSVGT IGT+VAY LVPMR+LG+DSWKIAAALMG IGGA NYV IS +S S
Sbjct: 476 AFLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSV 535
Query: 241 FAAGLAVDKVICALYFATLFTLASKELPETTRRND-VEKDTETEYNNKLLVLQAATSLAV 300
AAGLA D VICA+YFATLF LASK E T +D V KD E E+NNKL VLQ+AT+LAV
Sbjct: 536 LAAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAV 595
Query: 301 SFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFV 360
SFAICK GSY+TK+F I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF
Sbjct: 596 SFAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQVFFT 655
Query: 361 VVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTT 420
VVGA NIWSV+NTAPSIF+FSLVQ AVHLA+TIGLGKLL FD+K LLIASNAN+ PTT
Sbjct: 656 VVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGPTT 715
Query: 421 ACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGLI-LKYI 458
AC MA KGWSSM +P IL G G AIATF I GL+ LKY+
Sbjct: 716 ACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKYM 756
BLAST of Sed0023303 vs. ExPASy TrEMBL
Match:
A0A0A0L600 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183390 PE=4 SV=1)
HSP 1 Score: 563.1 bits (1450), Expect = 1.0e-156
Identity = 319/461 (69.20%), Postives = 366/461 (79.39%), Query Frame = 0
Query: 3 SQFAILHSKSPQVQLPCLSSTRISATFSRNMAMVPQPLVQQLSFSSSSSSIEISGCRFFH 62
SQ ILHSKSP++Q PC SST+ S FSR+++M P +Q S SSSS + EI+ RF+
Sbjct: 5 SQLTILHSKSPELQTPCFSSTKFSVGFSRSISMATHPPLQ--SLSSSSLTAEITCPRFWS 64
Query: 63 FPRNSFGNVQLRRNVAVKSH----LPLVSPDDQWGNLAVLFSAGALGIWSEETKIGSALS 122
F ++S GNVQ RR+VAV+SH LPLVSP DQWGN VLFS GA GIWSE+TK+GSALS
Sbjct: 65 FRKSSNGNVQSRRDVAVRSHLKLNLPLVSPYDQWGNWTVLFSIGAFGIWSEKTKVGSALS 124
Query: 123 GALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILLAF 182
GALVS L+GLAASNFGIIASDA AF IV+EFLLPLAVPLLLFRA LR VIKST T+LLAF
Sbjct: 125 GALVSTLVGLAASNFGIIASDAPAFAIVLEFLLPLAVPLLLFRADLRRVIKSTGTLLLAF 184
Query: 183 LLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSAFA 242
LLGSVGTT+GT VAY LVPMR+LG+DSWKIAAALMG IGGA NYV ISD +S S A
Sbjct: 185 LLGSVGTTVGTVVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISDALGVSPSVLA 244
Query: 243 AGLAVDKVICALYFATLFTLASKELPE-TTRRNDVEKDTETEYNNKLLVLQAATSLAVSF 302
AGLA D VICA+YFATLF LASK PE TT N V KD E E +NKL VLQ+A+++AVSF
Sbjct: 245 AGLAADNVICAVYFATLFALASKVPPEPTTLDNGVGKDAEVEPSNKLPVLQSASAVAVSF 304
Query: 303 AICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFVVV 362
AICK+GSY+TKYF I GGS+PAIT VIVV+ IFPK FAYLAPS EA+A+ +MQVFF VV
Sbjct: 305 AICKVGSYLTKYFGIQGGSMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQVFFAVV 364
Query: 363 GARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTTAC 422
GA N+WSV+NTAPSIF+F+ VQ +VHL I IGLGKLL FD+KSLLIASNAN+ PTTAC
Sbjct: 365 GASGNVWSVINTAPSIFLFAFVQISVHLVIIIGLGKLLRFDLKSLLIASNANVGGPTTAC 424
Query: 423 VMAANKGWSSMTIPVILVGFLGRAIATFPSIVLG-LILKYI 458
MA KGWSSM IP IL G G A+ATF I G ++LKY+
Sbjct: 425 GMATAKGWSSMVIPGILAGIFGIAMATFLGIGFGMMVLKYM 463
BLAST of Sed0023303 vs. TAIR 10
Match:
AT5G52540.1 (Protein of unknown function (DUF819) )
HSP 1 Score: 424.9 bits (1091), Expect = 8.4e-119
Identity = 240/421 (57.01%), Postives = 305/421 (72.45%), Query Frame = 0
Query: 43 QLSFSSSSSSIEISGCRFFHFPRNSFGNVQLRRNVAVKS-HLPLVSPDDQWGNLAVLFSA 102
+LSFS +S S +G F P +S R+V V S PL+SP+D+WG LF+
Sbjct: 45 RLSFSPASLSQFRNGTDRFLSPESS----SPIRSVTVSSLSTPLISPNDEWGTWTALFAT 104
Query: 103 GALGIWSEETKIGSALSGALVSILLGLAASNFGIIASDASAFPIVMEFLLPLAVPLLLFR 162
GALG+WSE+TK+G+A+SGALVS L+GLAASN GII+S A AF +V+ FLLPLAVPLLLFR
Sbjct: 105 GALGLWSEKTKVGAAMSGALVSTLVGLAASNLGIISSQAPAFAVVLNFLLPLAVPLLLFR 164
Query: 163 AHLRHVIKSTWTILLAFLLGSVGTTIGTSVAYSLVPMRTLGRDSWKIAAALMGMRIGGAF 222
A LR V++ST +LLAFL+GSV TT+GT++AY LVPM++LG DSWKIAAALMG IGGA
Sbjct: 165 ADLRRVVQSTGKLLLAFLIGSVATTVGTALAYYLVPMKSLGPDSWKIAAALMGRHIGGAV 224
Query: 223 NYVGISDFFDISSSAFAAGLAVDKVICALYFATLFTLASK----ELPETTRRNDVEKDTE 282
NYV IS+ ++ S AAGLA D VICA+YF TLF L SK +P T D E +
Sbjct: 225 NYVAISNALGVTPSVLAAGLAADNVICAVYFTTLFALGSKIPAEAVPPPTTIVDAETNEA 284
Query: 283 TEYNNKLLVLQAATSLAVSFAICKIGSYMTKYFEIPGGSIPAITIVIVVVTAIFPKSFAY 342
+E NK+ VL AT +AVS AICK G+ +TKYF I GGS+PAIT V+V++ +FP F
Sbjct: 285 SETKNKIPVLLIATGIAVSLAICKAGALLTKYFGISGGSLPAITAVVVILATVFPSQFGR 344
Query: 343 LAPSAEAIAMFIMQVFFVVVGARVNIWSVVNTAPSIFVFSLVQTAVHLAITIGLGKLLHF 402
LAPS EA+A+ +MQVFF VVGA NIWSV+NTAPSIF+F+LVQ HLA+ +G+GKLL+
Sbjct: 345 LAPSGEAMALILMQVFFTVVGASGNIWSVINTAPSIFLFALVQIGTHLAVILGIGKLLNI 404
Query: 403 DMKSLLIASNANIVDPTTACVMAANKGWSSMTIPVILVGFLGRAIATFPSIVLGL-ILKY 458
+++ LL+ASNAN+ PTTA MA KGW+S+ +P IL G G AIATF I G+ +LK+
Sbjct: 405 ELRLLLLASNANVGGPTTAAGMATAKGWNSLIVPGILAGIFGIAIATFIGIAFGVKVLKF 461
BLAST of Sed0023303 vs. TAIR 10
Match:
AT5G24000.1 (Protein of unknown function (DUF819) )
HSP 1 Score: 376.7 bits (966), Expect = 2.6e-104
Identity = 212/387 (54.78%), Postives = 272/387 (70.28%), Query Frame = 0
Query: 74 RRNVAVKSHL--PLVSPDDQWGNLAVLFSAGALGIWSEETKIGSALSGALVSILLGLAAS 133
RR V V S L PL+SPDD W A LF+AGA G+WSE+TKIGS +SGAL S LLGLAAS
Sbjct: 55 RRRVKVYSQLRFPLISPDDHWSQWAALFAAGAFGVWSEKTKIGSMVSGALTSTLLGLAAS 114
Query: 134 NFGIIASDASAFPIVMEFLLPLAVPLLLFRAHLRHVIKSTWTILLAFLLGSVGTTIGTSV 193
N +I + ++ MEFLLP +PLLLFRA LR +I+ST ++LLAFL+GSV T +GT V
Sbjct: 115 NLRLIPFETPSYGFFMEFLLPHTIPLLLFRADLRRIIRSTGSLLLAFLIGSVATIVGTVV 174
Query: 194 AYSLVPMRTLGRDSWKIAAALMGMRIGGAFNYVGISDFFDISSSAFAAGLAVDKVICALY 253
A+ LVPMR+LG D+WKIAAALMG IGG+ N+V IS+ IS S AAG+AVD VICAL+
Sbjct: 175 AFMLVPMRSLGPDNWKIAAALMGSYIGGSLNFVAISEALQISPSVIAAGVAVDNVICALH 234
Query: 254 FATLFTLASKELPETTRRN----DVEKDTETEYNNKLLVLQAATSLAVSFAICKIGSYMT 313
F LF LASK PET + D+ KD + E N+ V+ + +L+VSF ICK +T
Sbjct: 235 FMVLFALASKIPPETASASSPDADMTKDDKLEDKNR--VVSTSIALSVSFLICKAAITLT 294
Query: 314 KYFEIPGGSIPAITIVIVVVTAIFPKSFAYLAPSAEAIAMFIMQVFFVVVGARVNIWSVV 373
F+I G +PA+T + +V+ FP F LAPSAE I++ +MQVFF ++GA ++W+V+
Sbjct: 295 TLFKIQGVMLPAVTAITIVLATSFPDFFNSLAPSAETISLILMQVFFTILGATGSVWNVI 354
Query: 374 NTAPSIFVFSLVQTAVHLAITIGLGKLLHFDMKSLLIASNANIVDPTTACVMAANKGWSS 433
NTAPSIF+F+ +Q VHLA+T+ LGKL DMK LL+ASNANI PTTAC MA KGW+S
Sbjct: 355 NTAPSIFLFAAIQVMVHLAVTLVLGKLFCIDMKLLLLASNANIGGPTTACAMATAKGWTS 414
Query: 434 MTIPVILVGFLGRAIATFPSIVLGLIL 455
+ +P IL G G +IATF I G+ +
Sbjct: 415 LVVPGILSGVFGVSIATFLGIGCGVFV 439
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038877446.1 | 2.6e-162 | 72.02 | uncharacterized membrane protein YjcL-like [Benincasa hispida] | [more] |
| XP_008439290.1 | 5.1e-158 | 69.89 | PREDICTED: uncharacterized membrane protein YjcL-like [Cucumis melo] | [more] |
| XP_022140905.1 | 2.5e-157 | 69.76 | uncharacterized protein LOC111011457 isoform X3 [Momordica charantia] | [more] |
| XP_022140902.1 | 2.5e-157 | 69.76 | uncharacterized protein LOC111011457 isoform X1 [Momordica charantia] | [more] |
| XP_022140906.1 | 2.5e-157 | 69.76 | uncharacterized protein LOC111011457 isoform X4 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| O31634 | 3.1e-33 | 27.62 | Uncharacterized membrane protein YjcL OS=Bacillus subtilis (strain 168) OX=22430... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3AZ41 | 2.4e-158 | 69.89 | uncharacterized membrane protein YjcL-like OS=Cucumis melo OX=3656 GN=LOC1034841... | [more] |
| A0A6J1CGH1 | 1.2e-157 | 69.76 | uncharacterized protein LOC111011457 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
| A0A6J1CIC3 | 1.2e-157 | 69.76 | uncharacterized protein LOC111011457 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
| A0A6J1CHF3 | 1.2e-157 | 69.76 | uncharacterized protein LOC111011457 isoform X4 OS=Momordica charantia OX=3673 G... | [more] |
| A0A0A0L600 | 1.0e-156 | 69.20 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183390 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G52540.1 | 8.4e-119 | 57.01 | Protein of unknown function (DUF819) | [more] |
| AT5G24000.1 | 2.6e-104 | 54.78 | Protein of unknown function (DUF819) | [more] |
