Sed0023300 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAACTGAATGTTCCAAAAGGACATGTGGCTGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAAGTATATTGAAGGATGAAAGAGCAAATGACAATCTGACATTTTTTTGACAATTTAGGCAATTTGACTTGCAAGAGAATGTATTCATTCAATTGTTAGCCTGTAAATGAGTCGTAACATTGTAAAGATTTATACAAAGAAACCATTCAGAATCAACTTGTATGTACCATATTCTTCAATCAATAGATCCTCAAAATTTTACTTCAACATACAACATCTGTCTTGTGAGGAGAGGAGAGAATACAGAAAAGGAACAAACTTTTTAAAATGTGTTTTTTCACAATTGAAAAGCTATAGATGATGGATTATCAGAGACATCATGGAAGAACTGCAACAAGAGTTTTGAGGATAATTGATGTTGAAAAATATGGAACTTGAATCATGAATGAGGATGGCTCTTGTAGTCTATCAACTTAATTGAAGTTCCATTAATAAGCTCTACAGCCTACCAAAAGAAACACAAGGCAGAGCCAAACTTATAGCTCCAAAACTAATAACATGACCAGTTGTATTCCTGAAGTGGTAATGGTTGCATCAATGACAATGGATAAAATTATTTGATGTTAATTGCAAAGTGCTCGCGTTAAATCACCGACAAGCTTATAGTCAATGAGTTTCGGTAAATTTAATCTTTTATCAATATTTATGCACTTTCCTCACTGGTGGGTTAGGAAATTTGCACAAATGGTATTAAAGAAGTTCAATTAGAGAAACCTTAACTCTTGATACCATGACCGAATGTCATCAAAGCTTGATGGCTAAGAGGATGTACTGAATTTCAGTTTAACCCCTTTGAACTCAAGTTCGAATCCCAGCAGGTACATTAACTCTGGTACTATGTTAAATTACAACTAAATCCAAAAACTTAAGCGGATAAGTTGCGGTACATGGGGATAATAGAGGACGTTGAGGTACATTATGATTTTTAGCATTGCCTCAAACCTGCAAAAGTAGCAATCTAGCAGGGATCAATTAGGCTTCATATAGAACAGAAACTCAAAATTGTTAAAAGGAAGTTAAGTCCATAAAGGTGACTAGAAATGTAGCATTCTCTATGCAGAACTTTCCATAAGCAACTGAGAGTCTCTTAATTCAAGACATGGATTTGGCTTATGGGTCACTGGTGTTGAGTTCTTCTAATTCTTTTGATGCCTTTGGAGAAGTCATCCTAATGAGAAGTAGCTCTTTTATGGCTCTTGATAAAATGAAGGATCGAGGTGGTATAATAAGCCAATTGTAAATGGTTAATTGGGATGGGAAATCAAATTAGTTGATTTAGCATTATATAACAATAACCATCAATAAAAGCAACCTAAATGACAATCCTCTGAGATTATAAACATCATTGAGGCATACATACCAAGAAATATCCATCTTTGAAGTAGTCCAATATTTCAACTTGATTCTAGTTCTATTGTCTTTTTCTCAATACCTACTAATATTTTTCAGCCAGAAGGAAATGTTTGAATATGACTTCATTTGTTGAGACAAGTGGGTCCACAGTTTCTGAAAGTTGGATCAAATTTGAAAGTGAATGTACTTCAACAACTTAAGCAAGCCATGTGAATATTTAATGAAGCAAGCTGTCTTGAACACCTATCTCTTATCTTCTCTTTTCTTCTATATATACATACCAAACAAGCAAGCTTATCTCCAACCCAAATCTTCTCACATATTCTCATCCAAGCAGTACAATCTACCATTTCTAGATCCATATCAAGAGCTCAACCATTTAAAGTCTGTCAGTGTTCTCTCTCTTCAATCGAATTTCGATATGGGAATCCGTTTACCTTCTGTCCTCCTCGGTGCCAAGCAAATTCTCAAGATGCAGTCTGTTTCTACAAGATGTCAGTCCAATGTTCCCAAAGGCCACATTCCGGTGTATGTCGGAGAGACTGAAAGAAAGCGGTTTTTTGTTCCTATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAACAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACTGGAGGGTTGACTATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTACATGCTTCATGA ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAACTGAATGTTCCAAAAGGACATGTGGCTGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAATCTGTCAGTGTTCTCTCTCTTCAATCGAATTTCGATATGGGAATCCGTTTACCTTCTGTCCTCCTCGGTGCCAAGCAAATTCTCAAGATGCAGTCTGTTTCTACAAGATGTCAGTCCAATGTTCCCAAAGGCCACATTCCGGTGTATGTCGGAGAGACTGAAAGAAAGCGGTTTTTTGTTCCTATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAACAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACTGGAGGGTTGACTATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTACATGCTTCATGA ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAACTGAATGTTCCAAAAGGACATGTGGCTGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAATCTGTCAGTGTTCTCTCTCTTCAATCGAATTTCGATATGGGAATCCGTTTACCTTCTGTCCTCCTCGGTGCCAAGCAAATTCTCAAGATGCAGTCTGTTTCTACAAGATGTCAGTCCAATGTTCCCAAAGGCCACATTCCGGTGTATGTCGGAGAGACTGAAAGAAAGCGGTTTTTTGTTCCTATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAACAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACTGGAGGGTTGACTATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTACATGCTTCATGA MGIRLLSLVPHAKQILKMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLPSVLLGAKQILKMQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFVDLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHAS Homology
BLAST of Sed0023300 vs. NCBI nr
Match: KAF8370056.1 (hypothetical protein HHK36_031911 [Tetracentron sinense]) HSP 1 Score: 274.6 bits (701), Expect = 6.7e-70 Identity = 144/217 (66.36%), Postives = 163/217 (75.12%), Query Frame = 0
BLAST of Sed0023300 vs. NCBI nr
Match: KAF8377846.1 (hypothetical protein HHK36_031232 [Tetracentron sinense]) HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69 Identity = 143/217 (65.90%), Postives = 163/217 (75.12%), Query Frame = 0
BLAST of Sed0023300 vs. NCBI nr
Match: KAF8370058.1 (hypothetical protein HHK36_031913 [Tetracentron sinense]) HSP 1 Score: 272.7 bits (696), Expect = 2.6e-69 Identity = 143/217 (65.90%), Postives = 167/217 (76.96%), Query Frame = 0
BLAST of Sed0023300 vs. NCBI nr
Match: KAA3482285.1 (auxin-responsive protein SAUR23-like [Gossypium australe]) HSP 1 Score: 270.0 bits (689), Expect = 1.7e-68 Identity = 139/218 (63.76%), Postives = 164/218 (75.23%), Query Frame = 0
BLAST of Sed0023300 vs. NCBI nr
Match: KAF8370055.1 (hypothetical protein HHK36_031910 [Tetracentron sinense]) HSP 1 Score: 268.9 bits (686), Expect = 3.7e-68 Identity = 141/217 (64.98%), Postives = 166/217 (76.50%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.4e-23 Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.4e-23 Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-22 Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22 Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-22 Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A5B6WMK6 (Auxin-responsive protein SAUR23-like OS=Gossypium australe OX=47621 GN=EPI10_004543 PE=3 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 8.0e-69 Identity = 139/218 (63.76%), Postives = 164/218 (75.23%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A7J7LNK3 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_007535 PE=3 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63 Identity = 131/213 (61.50%), Postives = 154/213 (72.30%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A4Y7I9U5 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_037751 PE=3 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 2.0e-59 Identity = 128/210 (60.95%), Postives = 155/210 (73.81%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A4Y7K113 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_010332 PE=3 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 5.8e-59 Identity = 125/205 (60.98%), Postives = 148/205 (72.20%), Query Frame = 0
BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A5B6X1S1 (Auxin-responsive protein SAUR23-like OS=Gossypium australe OX=47621 GN=EPI10_031568 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 3.7e-58 Identity = 122/203 (60.10%), Postives = 151/203 (74.38%), Query Frame = 0
BLAST of Sed0023300 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27 Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Sed0023300 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.9 bits (294), Expect = 9.8e-27 Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of Sed0023300 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26 Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of Sed0023300 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.2 bits (274), Expect = 2.0e-24 Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of Sed0023300 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24 Identity = 63/102 (61.76%), Postives = 69/102 (67.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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