Sed0023300 (gene) Chayote v1

Overview
NameSed0023300
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSAUR-like auxin-responsive protein family
LocationLG05: 44268857 .. 44271206 (+)
RNA-Seq ExpressionSed0023300
SyntenySed0023300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAACTGAATGTTCCAAAAGGACATGTGGCTGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAAGTATATTGAAGGATGAAAGAGCAAATGACAATCTGACATTTTTTTGACAATTTAGGCAATTTGACTTGCAAGAGAATGTATTCATTCAATTGTTAGCCTGTAAATGAGTCGTAACATTGTAAAGATTTATACAAAGAAACCATTCAGAATCAACTTGTATGTACCATATTCTTCAATCAATAGATCCTCAAAATTTTACTTCAACATACAACATCTGTCTTGTGAGGAGAGGAGAGAATACAGAAAAGGAACAAACTTTTTAAAATGTGTTTTTTCACAATTGAAAAGCTATAGATGATGGATTATCAGAGACATCATGGAAGAACTGCAACAAGAGTTTTGAGGATAATTGATGTTGAAAAATATGGAACTTGAATCATGAATGAGGATGGCTCTTGTAGTCTATCAACTTAATTGAAGTTCCATTAATAAGCTCTACAGCCTACCAAAAGAAACACAAGGCAGAGCCAAACTTATAGCTCCAAAACTAATAACATGACCAGTTGTATTCCTGAAGTGGTAATGGTTGCATCAATGACAATGGATAAAATTATTTGATGTTAATTGCAAAGTGCTCGCGTTAAATCACCGACAAGCTTATAGTCAATGAGTTTCGGTAAATTTAATCTTTTATCAATATTTATGCACTTTCCTCACTGGTGGGTTAGGAAATTTGCACAAATGGTATTAAAGAAGTTCAATTAGAGAAACCTTAACTCTTGATACCATGACCGAATGTCATCAAAGCTTGATGGCTAAGAGGATGTACTGAATTTCAGTTTAACCCCTTTGAACTCAAGTTCGAATCCCAGCAGGTACATTAACTCTGGTACTATGTTAAATTACAACTAAATCCAAAAACTTAAGCGGATAAGTTGCGGTACATGGGGATAATAGAGGACGTTGAGGTACATTATGATTTTTAGCATTGCCTCAAACCTGCAAAAGTAGCAATCTAGCAGGGATCAATTAGGCTTCATATAGAACAGAAACTCAAAATTGTTAAAAGGAAGTTAAGTCCATAAAGGTGACTAGAAATGTAGCATTCTCTATGCAGAACTTTCCATAAGCAACTGAGAGTCTCTTAATTCAAGACATGGATTTGGCTTATGGGTCACTGGTGTTGAGTTCTTCTAATTCTTTTGATGCCTTTGGAGAAGTCATCCTAATGAGAAGTAGCTCTTTTATGGCTCTTGATAAAATGAAGGATCGAGGTGGTATAATAAGCCAATTGTAAATGGTTAATTGGGATGGGAAATCAAATTAGTTGATTTAGCATTATATAACAATAACCATCAATAAAAGCAACCTAAATGACAATCCTCTGAGATTATAAACATCATTGAGGCATACATACCAAGAAATATCCATCTTTGAAGTAGTCCAATATTTCAACTTGATTCTAGTTCTATTGTCTTTTTCTCAATACCTACTAATATTTTTCAGCCAGAAGGAAATGTTTGAATATGACTTCATTTGTTGAGACAAGTGGGTCCACAGTTTCTGAAAGTTGGATCAAATTTGAAAGTGAATGTACTTCAACAACTTAAGCAAGCCATGTGAATATTTAATGAAGCAAGCTGTCTTGAACACCTATCTCTTATCTTCTCTTTTCTTCTATATATACATACCAAACAAGCAAGCTTATCTCCAACCCAAATCTTCTCACATATTCTCATCCAAGCAGTACAATCTACCATTTCTAGATCCATATCAAGAGCTCAACCATTTAAAGTCTGTCAGTGTTCTCTCTCTTCAATCGAATTTCGATATGGGAATCCGTTTACCTTCTGTCCTCCTCGGTGCCAAGCAAATTCTCAAGATGCAGTCTGTTTCTACAAGATGTCAGTCCAATGTTCCCAAAGGCCACATTCCGGTGTATGTCGGAGAGACTGAAAGAAAGCGGTTTTTTGTTCCTATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAACAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACTGGAGGGTTGACTATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTACATGCTTCATGA

mRNA sequence

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAACTGAATGTTCCAAAAGGACATGTGGCTGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAATCTGTCAGTGTTCTCTCTCTTCAATCGAATTTCGATATGGGAATCCGTTTACCTTCTGTCCTCCTCGGTGCCAAGCAAATTCTCAAGATGCAGTCTGTTTCTACAAGATGTCAGTCCAATGTTCCCAAAGGCCACATTCCGGTGTATGTCGGAGAGACTGAAAGAAAGCGGTTTTTTGTTCCTATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAACAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACTGGAGGGTTGACTATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTACATGCTTCATGA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAACTGAATGTTCCAAAAGGACATGTGGCTGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCATTTATTGATCTCACTTCTAGATTGCAATCTGTCAGTGTTCTCTCTCTTCAATCGAATTTCGATATGGGAATCCGTTTACCTTCTGTCCTCCTCGGTGCCAAGCAAATTCTCAAGATGCAGTCTGTTTCTACAAGATGTCAGTCCAATGTTCCCAAAGGCCACATTCCGGTGTATGTCGGAGAGACTGAAAGAAAGCGGTTTTTTGTTCCTATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAACAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACTGGAGGGTTGACTATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTACATGCTTCATGA

Protein sequence

MGIRLLSLVPHAKQILKMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLPSVLLGAKQILKMQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFVDLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHAS
Homology
BLAST of Sed0023300 vs. NCBI nr
Match: KAF8370056.1 (hypothetical protein HHK36_031911 [Tetracentron sinense])

HSP 1 Score: 274.6 bits (701), Expect = 6.7e-70
Identity = 144/217 (66.36%), Postives = 163/217 (75.12%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQL-------NVPKGHVAVYVGEFQRKRFVVPISYL 60
           MGIRL SL  HAKQI+K+QS   +NQL       +VPKGH AVYVGE Q+KR+VVP+SYL
Sbjct: 1   MGIRLPSLALHAKQIIKVQSLLFRNQLSPAATTAHVPKGHFAVYVGENQKKRYVVPMSYL 60

Query: 61  NHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLP 120
           NHPSFQ LL+ AEEEFGF HP GGLTIPCKE  FIDLTS        S  S   MGIRLP
Sbjct: 61  NHPSFQDLLTRAEEEFGFDHPMGGLTIPCKEATFIDLTSLRSICDCHSQTSTAVMGIRLP 120

Query: 121 SVLLGAKQILKMQSVSTRCQ-------SNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 180
           S+ L AKQILK+QS+ TR Q       ++VPKGH  VYVGE  +KRF VPIS+L+HPSF 
Sbjct: 121 SLALHAKQILKLQSLLTRNQLSQAATTADVPKGHFAVYVGENLKKRFVVPISFLNHPSFQ 180

Query: 181 DLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHA 204
           DLL RAEEEFG+NHP GGLTIPCKE AFID+TSRL+A
Sbjct: 181 DLLTRAEEEFGYNHPMGGLTIPCKEAAFIDLTSRLNA 217

BLAST of Sed0023300 vs. NCBI nr
Match: KAF8377846.1 (hypothetical protein HHK36_031232 [Tetracentron sinense])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 143/217 (65.90%), Postives = 163/217 (75.12%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQL-------NVPKGHVAVYVGEFQRKRFVVPISYL 60
           MGIRL SL  HAKQI+K+QS   +NQL       +VPKGH AVYVGE Q+KR+VVP+SYL
Sbjct: 1   MGIRLPSLALHAKQIIKVQSLLFRNQLSPAATTAHVPKGHFAVYVGENQKKRYVVPMSYL 60

Query: 61  NHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLP 120
           NHPSFQ LL+ AEEEFGF HP GGLTIPCKE  FIDLTS        S  S   MGIRLP
Sbjct: 61  NHPSFQDLLTRAEEEFGFDHPMGGLTIPCKEATFIDLTSLRSICDCHSQTSTAVMGIRLP 120

Query: 121 SVLLGAKQILKMQSVSTRCQ-------SNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 180
           S+ L AKQILK+QS+ TR Q       ++VPKGH  VYVGE  ++RF VPIS+L+HPSF 
Sbjct: 121 SLALHAKQILKLQSLLTRNQLSQTATTADVPKGHFAVYVGENMKRRFVVPISFLNHPSFQ 180

Query: 181 DLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHA 204
           DLL RAEEEFG+NHP GGLTIPCKE AFID+TSRL+A
Sbjct: 181 DLLTRAEEEFGYNHPMGGLTIPCKEAAFIDLTSRLNA 217

BLAST of Sed0023300 vs. NCBI nr
Match: KAF8370058.1 (hypothetical protein HHK36_031913 [Tetracentron sinense])

HSP 1 Score: 272.7 bits (696), Expect = 2.6e-69
Identity = 143/217 (65.90%), Postives = 167/217 (76.96%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQL-------NVPKGHVAVYVGEFQRKRFVVPISYL 60
           MGIRL SL  HAKQILK+QS  T+NQL       +VPKG  AVYVGE Q++RFVVPIS+L
Sbjct: 1   MGIRLPSLALHAKQILKLQSLLTRNQLSRAATTADVPKGQFAVYVGENQKRRFVVPISFL 60

Query: 61  NHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLP 120
           NHPSFQ LL+ AEEEFG+ HP GGLTIPCKE AFIDLT    S+ +    S   MGIRLP
Sbjct: 61  NHPSFQDLLTRAEEEFGYDHPMGGLTIPCKEAAFIDLT----SLVLFHFASRTVMGIRLP 120

Query: 121 SVLLGAKQILKMQSVSTRCQ-------SNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 180
           S+ L AKQILK+QS+ TR Q       ++VPKGH  VYVGE ++KRF VPIS+L+HPSF 
Sbjct: 121 SLTLHAKQILKVQSLLTRNQLSQAATTADVPKGHFAVYVGENQKKRFVVPISFLNHPSFQ 180

Query: 181 DLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHA 204
           DLL+RAEEEFG++HP GGLTIPCKE AFID+TSRL+A
Sbjct: 181 DLLSRAEEEFGYDHPMGGLTIPCKETAFIDLTSRLNA 213

BLAST of Sed0023300 vs. NCBI nr
Match: KAA3482285.1 (auxin-responsive protein SAUR23-like [Gossypium australe])

HSP 1 Score: 270.0 bits (689), Expect = 1.7e-68
Identity = 139/218 (63.76%), Postives = 164/218 (75.23%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQ 60
           MGI L S++ HAKQ+LK QS   +NQL+VPKGH+AVYVGE +  RFVVPISYLNHP F  
Sbjct: 1   MGIHLPSMILHAKQVLKFQS---RNQLHVPKGHIAVYVGEMKTTRFVVPISYLNHPCFLD 60

Query: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSV----------------LSLQS 120
           LL  AEEEFGF+HP GGLTIPC EDAFIDLTSRL+ + +                ++LQ 
Sbjct: 61  LLGRAEEEFGFNHPMGGLTIPCDEDAFIDLTSRLKHLPINTNTAQQAFPITKYTFINLQK 120

Query: 121 NFDMGIRLPSVLLGAKQILKMQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHPS 180
           + +MGI LPS++  AKQ+LK QS   R Q +VPKGHI VYVGE ++ RF VPISYL+HP 
Sbjct: 121 S-NMGIHLPSMIHHAKQVLKFQS---RNQLHVPKGHIAVYVGEMKKTRFVVPISYLNHPC 180

Query: 181 FVDLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLH 203
           F+DLL RAEEEFGFNHP GGLTIPC E+AFID+TSRLH
Sbjct: 181 FLDLLGRAEEEFGFNHPMGGLTIPCDEDAFIDLTSRLH 211

BLAST of Sed0023300 vs. NCBI nr
Match: KAF8370055.1 (hypothetical protein HHK36_031910 [Tetracentron sinense])

HSP 1 Score: 268.9 bits (686), Expect = 3.7e-68
Identity = 141/217 (64.98%), Postives = 166/217 (76.50%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQL-------NVPKGHVAVYVGEFQRKRFVVPISYL 60
           MGIRL SL  HAKQILK+QS  T+NQL       NVPKGH AVYVGE Q+ RFVVPIS+L
Sbjct: 1   MGIRLPSLALHAKQILKLQSLLTRNQLSQAATTANVPKGHFAVYVGENQKSRFVVPISFL 60

Query: 61  NHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLP 120
           NHPSFQ LL+ AEEEFG++HP GGLTIPCKE AFIDLTS    V ++   S   MGIRL 
Sbjct: 61  NHPSFQDLLTQAEEEFGYNHPMGGLTIPCKEAAFIDLTS---LVVLVHFASRTVMGIRLL 120

Query: 121 SVLLGAKQILKMQSVSTRCQ-------SNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 180
           S++L AKQILK+QS+ TR Q       ++VPKGH  VYVGE +++RF  PIS+L+HPSF 
Sbjct: 121 SMVLHAKQILKVQSLLTRNQLSQAATTADVPKGHFAVYVGENQKRRFVAPISFLNHPSFQ 180

Query: 181 DLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHA 204
           DLL+RA+EEFG+ HP GGLTIPCKE AFID+TS L+A
Sbjct: 181 DLLSRAKEEFGYIHPMGGLTIPCKEAAFIDITSHLNA 214

BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.4e-23
Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 0

Query: 30 PKGHVAVYVGEFQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.4e-23
Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0

Query: 17 KMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-22
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0

Query: 17 KMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0

Query: 12 AKQILKMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   ++        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 88

BLAST of Sed0023300 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.2e-22
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0

Query: 17 KMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A5B6WMK6 (Auxin-responsive protein SAUR23-like OS=Gossypium australe OX=47621 GN=EPI10_004543 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 8.0e-69
Identity = 139/218 (63.76%), Postives = 164/218 (75.23%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQ 60
           MGI L S++ HAKQ+LK QS   +NQL+VPKGH+AVYVGE +  RFVVPISYLNHP F  
Sbjct: 1   MGIHLPSMILHAKQVLKFQS---RNQLHVPKGHIAVYVGEMKTTRFVVPISYLNHPCFLD 60

Query: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSV----------------LSLQS 120
           LL  AEEEFGF+HP GGLTIPC EDAFIDLTSRL+ + +                ++LQ 
Sbjct: 61  LLGRAEEEFGFNHPMGGLTIPCDEDAFIDLTSRLKHLPINTNTAQQAFPITKYTFINLQK 120

Query: 121 NFDMGIRLPSVLLGAKQILKMQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHPS 180
           + +MGI LPS++  AKQ+LK QS   R Q +VPKGHI VYVGE ++ RF VPISYL+HP 
Sbjct: 121 S-NMGIHLPSMIHHAKQVLKFQS---RNQLHVPKGHIAVYVGEMKKTRFVVPISYLNHPC 180

Query: 181 FVDLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLH 203
           F+DLL RAEEEFGFNHP GGLTIPC E+AFID+TSRLH
Sbjct: 181 FLDLLGRAEEEFGFNHPMGGLTIPCDEDAFIDLTSRLH 211

BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A7J7LNK3 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_007535 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63
Identity = 131/213 (61.50%), Postives = 154/213 (72.30%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQ 60
           MGIRL  +V HAKQI++ +S+  K Q++VPKGH  VYVGE  +KRFV+PI YLNHP FQ 
Sbjct: 1   MGIRLPEMVVHAKQIIRQRSTLRKKQIDVPKGHFVVYVGEGNKKRFVIPIWYLNHPLFQD 60

Query: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAF-IDLTSRLQSVSVLSLQSNFDMGIRLPSVLLGA 120
           LL+ AEEEFGF HP GGLTIPCKE    I    R  S   ++      MGIRL S+   A
Sbjct: 61  LLNRAEEEFGFEHPTGGLTIPCKEGLLKIPYCLRFYSTQKIA------MGIRLLSMAQHA 120

Query: 121 KQILKMQSVSTRCQ--------SNVPKGHIPVYVGETERKRFFVPISYLSHPSFVDLLNR 180
           KQILK QS+ T+ Q        ++VPKGH+ VYVGE E+KRF VPISYL+HPSF DLL+R
Sbjct: 121 KQILKKQSLLTKNQLSPAANATTDVPKGHLAVYVGENEKKRFVVPISYLNHPSFQDLLSR 180

Query: 181 AEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHAS 205
           AEEEFGF+H  GGLTIPCKE AFID TSRL+AS
Sbjct: 181 AEEEFGFDHSMGGLTIPCKESAFIDFTSRLNAS 207

BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A4Y7I9U5 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_037751 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.0e-59
Identity = 128/210 (60.95%), Postives = 155/210 (73.81%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLN----VPKGHVAVYVGEFQRKRFVVPISYLNHP 60
           MGIRL S++P +KQI+++QS  T+NQL+    VPKGH AVYVGE + KRFVVP+SYLNHP
Sbjct: 100 MGIRLRSMIPQSKQIVRLQSFLTRNQLSTTSPVPKGHCAVYVGETEMKRFVVPLSYLNHP 159

Query: 61  SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ-SVSVLSLQSNFD-MGIRLPS 120
           SFQ LLS AEEEFGF HP G LTIPCKE AF+DLTSRL    ++L   +  + MG+RLP 
Sbjct: 160 SFQILLSRAEEEFGFDHPMGALTIPCKEAAFLDLTSRLYFRFTLLRFLTPIEVMGLRLPG 219

Query: 121 VLLGAKQILKMQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFVDLLNRAEE 180
             L AKQIL+    +    ++VPKGH  VYVGE + KRF V IS L+HPSF DLL+RAEE
Sbjct: 220 KSL-AKQILRRSPSAAMTVADVPKGHFAVYVGENQ-KRFVVHISILNHPSFQDLLSRAEE 279

Query: 181 EFGFNHPTGGLTIPCKEEAFIDVTSRLHAS 205
           EFGF H  GGLTIPC E+ FI + S L++S
Sbjct: 280 EFGFAHRKGGLTIPCHEDTFIHLISNLNSS 307

BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A4Y7K113 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_010332 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.8e-59
Identity = 125/205 (60.98%), Postives = 148/205 (72.20%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLN----VPKGHVAVYVGEFQRKRFVVPISYLNHP 60
           MGIRL S++P +KQI+++QS   +NQL+    VPKGH  VYVGE + KRFVVP+SYLNHP
Sbjct: 76  MGIRLRSMIPQSKQIVRLQSFLIRNQLSTTTPVPKGHCVVYVGETEMKRFVVPVSYLNHP 135

Query: 61  SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLPSVL 120
           SFQ LLS AEEEFGF HP G LTIPCKE AF+DLTS++             MG+RLP   
Sbjct: 136 SFQILLSRAEEEFGFDHPMGALTIPCKEAAFLDLTSQV-------------MGLRLPGKS 195

Query: 121 LGAKQILKMQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFVDLLNRAEEEF 180
           L AKQIL+  + S    ++VPKGH  VYVGE + KRF VPIS L+HPSF DLL+RAEEEF
Sbjct: 196 L-AKQILQRSASSAMTVADVPKGHFAVYVGENQ-KRFVVPISILNHPSFQDLLSRAEEEF 255

Query: 181 GFNHPTGGLTIPCKEEAFIDVTSRL 202
           GF H  GGLTIPC E+ FI +TS L
Sbjct: 256 GFAHRKGGLTIPCNEDTFIHLTSNL 265

BLAST of Sed0023300 vs. ExPASy TrEMBL
Match: A0A5B6X1S1 (Auxin-responsive protein SAUR23-like OS=Gossypium australe OX=47621 GN=EPI10_031568 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.7e-58
Identity = 122/203 (60.10%), Postives = 151/203 (74.38%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLNVPKGHVAVYVGEFQRKRFVVPISYLNHPSFQQ 60
           MG RL S++ HAKQ+LK+QS   +NQ +VPKGH+AVYVGE Q+ RFVVPISYLNHPSF  
Sbjct: 1   MGFRLPSVILHAKQVLKLQS---RNQTDVPKGHIAVYVGEIQKTRFVVPISYLNHPSFVD 60

Query: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVSVLSLQSNFDMGIRLPSVLLGAK 120
           LL+ AEE+FG   P   L        FI L S   +  + +L S   MG RLPS+++ AK
Sbjct: 61  LLNLAEEQFG---PCLYLQHLTFSHLFISLWSSKFNFQLQNLVST--MGFRLPSIVVNAK 120

Query: 121 QILKMQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFVDLLNRAEEEFGFNH 180
           Q+LK Q    + QS+VPKGHI +YVGE ERKR+ +P+++L+HPSFVDLLN+AEEEFGFNH
Sbjct: 121 QVLKAQ----QAQSSVPKGHITIYVGEVERKRYIIPVTFLNHPSFVDLLNQAEEEFGFNH 180

Query: 181 PTGGLTIPCKEEAFIDVTSRLHA 204
           P GGLTIPCKE+ FID+ SRLHA
Sbjct: 181 PMGGLTIPCKEDTFIDLASRLHA 191

BLAST of Sed0023300 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 0

Query: 108 MGIRLPSVLLGAKQILK----MQSVSTRCQSNVPKGHIPVYVGETERKRFFVPISYLSHP 167
           M IR+P VL  +KQIL+    + S S+    +VPKG++ VYVGE   KRF VP+SYL  P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 168 SFVDLLNRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLH 203
           SF DLL +AEEEFGF+HP GGLTIPC EE FID+ SR +
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

BLAST of Sed0023300 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 9.8e-27
Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQL------NVPKGHVAVYVG---EFQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+       +VPKGHVAVYVG   E ++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

BLAST of Sed0023300 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 0

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLNVPKGHVAVYVGE-FQRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK   S + N + +PKGH+AVYVGE  Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQSVS 99
          +LL  AEEEFGF HP GGLTIPC E  FIDL SRL + S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTSS 98

BLAST of Sed0023300 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 2.0e-24
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLN-----------VPKGHVAVYVGE-FQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN  +           VPKGHVAVYVGE  ++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
           PISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+ L +  Q
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQ 106

BLAST of Sed0023300 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24
Identity = 63/102 (61.76%), Postives = 69/102 (67.65%), Query Frame = 0

Query: 1   MGIRLLSLVPHAKQILKMQSS-------FTKNQLNVPKGHVAVYVGE-FQRKRFVVPISY 60
           MGI+L+ L   AKQ L+   S        T    NVPKGHVAVYVGE + RKRFV+PISY
Sbjct: 1   MGIQLIGL-SQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISY 60

Query: 61  LNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL 95
           LNHP FQ LL+ AEEEFGF HP GGLTIPC ED F  L S L
Sbjct: 61  LNHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASIL 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF8370056.16.7e-7066.36hypothetical protein HHK36_031911 [Tetracentron sinense][more]
KAF8377846.11.1e-6965.90hypothetical protein HHK36_031232 [Tetracentron sinense][more]
KAF8370058.12.6e-6965.90hypothetical protein HHK36_031913 [Tetracentron sinense][more]
KAA3482285.11.7e-6863.76auxin-responsive protein SAUR23-like [Gossypium australe][more]
KAF8370055.13.7e-6864.98hypothetical protein HHK36_031910 [Tetracentron sinense][more]
Match NameE-valueIdentityDescription
Q9FK626.4e-2374.24Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S... [more]
Q9FJG08.4e-2365.82Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S... [more]
Q9FJF71.4e-2264.56Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S... [more]
Q9FJF92.4e-2261.90Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S... [more]
Q9FJG13.2e-2264.56Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A5B6WMK68.0e-6963.76Auxin-responsive protein SAUR23-like OS=Gossypium australe OX=47621 GN=EPI10_004... [more]
A0A7J7LNK36.6e-6361.50Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_007535 PE=3 SV=1[more]
A0A4Y7I9U52.0e-5960.95Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_037751 PE=3 SV=1[more]
A0A4Y7K1135.8e-5960.98Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_010332 PE=3 SV=1[more]
A0A5B6X1S13.7e-5860.10Auxin-responsive protein SAUR23-like OS=Gossypium australe OX=47621 GN=EPI10_031... [more]
Match NameE-valueIdentityDescription
AT4G38840.11.2e-2758.59SAUR-like auxin-responsive protein family [more]
AT4G34810.19.8e-2758.10SAUR-like auxin-responsive protein family [more]
AT2G21210.11.3e-2658.59SAUR-like auxin-responsive protein family [more]
AT4G34790.12.0e-2455.14SAUR-like auxin-responsive protein family [more]
AT4G34770.12.7e-2461.76SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 118..200
e-value: 1.1E-25
score: 89.7
coord: 13..93
e-value: 5.1E-26
score: 90.7
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 1..96
NoneNo IPR availablePANTHERPTHR31929:SF121AUXIN-RESPONSIVE PROTEIN SAUR21-LIKEcoord: 1..96
NoneNo IPR availablePANTHERPTHR31929:SF121AUXIN-RESPONSIVE PROTEIN SAUR21-LIKEcoord: 108..203
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 108..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0023300.1Sed0023300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin