Sed0023247 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAATTGGAGGGCATTGGGAAAATTTTAGAGTGCTTCTTAAATACACGATCTACAAAATTCAACGAATTTGAAGATAAATTTGATCACAAAAAGCCATTAATAATAATTCCCAAATTACAAAATTCATCTCAGCTTCTCGGATTGAAGGATTCCATTTCTGATCAAACCAACACGCTCGCCCTTCACTTGAAGCCCAAGGTCAGATTCCAGATCTTTCTCTTTGTTTTCCGGTTTATTTTCTATTTATTTTAATTTAAAATTTTGTTTATTTAGATCTCATTTGATAATTATTTTTCTTTTTTTTTTTATGGAATTTAAGTCTATAAACAACTATCTTACTTTACATTTTTTCTTTATTTGGATATCTGCATCTTACCTGTATTTTAATAAACAAAACCAAAATTTGAAAACAAAAAATGTAACTTCCAAAAGTTTGTTTTTGTTTTTAAAATTTGGTTAGTATTCACTTAATTTCTTAAAGAAATATAGATACATTGTATGAAAGATTAGGCACATGTAGAAAATTTGAGTAGAAATAAGTTTAAATTTCATAAACCAAAAACAAAAAACCAAATAATTAAGCCCCATTTCATAACCATTTTATTTTTCGTTTTTTTTTTTTGAAAACAAAAAAAATAGCTTCCAAATGTTTGTTTTTGTTTTTCAAATTTAGTTAGTATTCACCTACTTTTTTAAGGAAAGAGAAATACACTCTAAGAAAGATGGAGCAAATGATTGAAAATTTGAGTAGAAATACGTTTAAATTTCATAAACAAAAAACAAAAAATGAAATGATTATTAAACAGGATTTTAATTTGTATAGTTTTAAAAGTTACCGTTTATTTTCTAAAGTTCCATAAAAACTCATGGGCAGTTTTTAATTTGTATAGTTTTAAAAGTTACCGTTTATTTTCTAAAGTTCCATAAAAACTCATGGGCAGTTTTTATTGGATTGGTTGATTAATTAAATCGGTGACAATTAATTATTCATGTGTAGATATATTTGTTAACCATTTGAGTTAAAAAGATTTTCAATCTATTTAATTAACATCAACCATCCAAAAATTCCCTTTAATTTATTACAAATATCACTTTTTGGGCTACTTTTTTTAACAAGCCAAAAAAATCAGGTGGTGATGCTGAGGGTGTCCATGCATTGCAATGGCTGTGCAAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGTAAATTTTTTTTATTTTTCTTTCAAAAACAAACAATAATTGAAGTGAGAATTTAAATGGTAATCTATTAGTTATGAAATCATATATTATGTCAATCAAACTAATCCTGGTTGACTTTATCTTGATATTTAACTAACAAGTAAAACTCTAAGAATATCATGTACGACATAATAATTAAAGGTGTGTTTGGACCCCCCGTTTATGTAAACGACCGAATTGGTTATAATAATCAAACCAATGTTTGCCACACAGTTTATTATAAACGGTGGTTACCTAAACTTGCGTACCAGTTTATCTAAACCTACGTGCTCGTTTATCTACACCTTACATATATTACTTTTTGTTACATAATCAGCCCCTCAAACACCGTTTATCATAATCCATGTTATAATAACTTGTCCCTCAAACACCATTTATAATAACTTACCGTTTATTATAACCTTCCATCTATAATAACCAAATCGGTGCTCCAAGTACACCCTAATAGATTAAAAGATCTTTACCCTCGACTAAAAAATATGATTTATTGAGATTACATTTCATCATTTGAAACACACAATGCATATATGATATTTTAATCTAAAACATTGTACTGTGGTTTTTTATAATTAAGTTGTTCGATAAATAACCACTTGATTGATAGAACAATTAATTTTTTAATGAGTGGACCTCCAACATGCAAAAAAATTGAAAGTTAGGATTTTATTAGACACAAAGCCAATATTATATCTAATGAATCAATCATTTAAAATCTGAATACATCGAAGATCTATTCATGAAATTAAAAGTTCGGTGATTTATAAGATATTTTAAAGTTTTAATAAGTAATTAAATAAGAAAAAAAACATGGTTAAAAAAAACTCAAAATTTTAAAGATTTATTAGAAAATTTGAATATCAATGCACTAAATAGACACAAACTAGATTGTAATTTAACCTATAAAATAAAATATTTATAATACTAAAAATATATAATATTGATGAGAAATATCCATCAACATTTTAAAAACTGTTTTTCAGGTGTGGATTCATATAAGGTGGATTTGGAAAAGAAAATGGTGGTTGTGACTGGAGATGTTTATCCCTTTGAAGTTCTTCAATGCATATCTAAAGTGAAAAATGCAGAGATTTGGGAACCAGAAGACTGA ATGGGAAAATTGGAGGGCATTGGGAAAATTTTAGAGTGCTTCTTAAATACACGATCTACAAAATTCAACGAATTTGAAGATAAATTTGATCACAAAAAGCCATTAATAATAATTCCCAAATTACAAAATTCATCTCAGCTTCTCGGATTGAAGGATTCCATTTCTGATCAAACCAACACGCTCGCCCTTCACTTGAAGCCCAAGGTGGTGATGCTGAGGGTGTCCATGCATTGCAATGGCTGTGCAAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGTGTGGATTCATATAAGGTGGATTTGGAAAAGAAAATGGTGGTTGTGACTGGAGATGTTTATCCCTTTGAAGTTCTTCAATGCATATCTAAAGTGAAAAATGCAGAGATTTGGGAACCAGAAGACTGA ATGGGAAAATTGGAGGGCATTGGGAAAATTTTAGAGTGCTTCTTAAATACACGATCTACAAAATTCAACGAATTTGAAGATAAATTTGATCACAAAAAGCCATTAATAATAATTCCCAAATTACAAAATTCATCTCAGCTTCTCGGATTGAAGGATTCCATTTCTGATCAAACCAACACGCTCGCCCTTCACTTGAAGCCCAAGGTGGTGATGCTGAGGGTGTCCATGCATTGCAATGGCTGTGCAAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGTGTGGATTCATATAAGGTGGATTTGGAAAAGAAAATGGTGGTTGTGACTGGAGATGTTTATCCCTTTGAAGTTCTTCAATGCATATCTAAAGTGAAAAATGCAGAGATTTGGGAACCAGAAGACTGA MGKLEGIGKILECFLNTRSTKFNEFEDKFDHKKPLIIIPKLQNSSQLLGLKDSISDQTNTLALHLKPKVVMLRVSMHCNGCARKVEKHISKMEGVDSYKVDLEKKMVVVTGDVYPFEVLQCISKVKNAEIWEPED Homology
BLAST of Sed0023247 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 3.0e-34 Identity = 83/143 (58.04%), Postives = 103/143 (72.03%), Query Frame = 0
BLAST of Sed0023247 vs. NCBI nr
Match: XP_030956298.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Quercus lobata]) HSP 1 Score: 149.4 bits (376), Expect = 2.2e-32 Identity = 86/137 (62.77%), Postives = 98/137 (71.53%), Query Frame = 0
BLAST of Sed0023247 vs. NCBI nr
Match: KAF3956730.1 (hypothetical protein CMV_018180 [Castanea mollissima]) HSP 1 Score: 148.7 bits (374), Expect = 3.7e-32 Identity = 87/137 (63.50%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of Sed0023247 vs. NCBI nr
Match: XP_023876421.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Quercus suber]) HSP 1 Score: 148.3 bits (373), Expect = 4.8e-32 Identity = 87/137 (63.50%), Postives = 101/137 (73.72%), Query Frame = 0
BLAST of Sed0023247 vs. NCBI nr
Match: EOY30863.1 (Heavy metal transport/detoxification superfamily protein [Theobroma cacao]) HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31 Identity = 81/135 (60.00%), Postives = 100/135 (74.07%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16 Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.7e-16 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.5e-15 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 7.8e-09 Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy Swiss-Prot
Match: Q9M8K5 (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.6e-08 Identity = 28/68 (41.18%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy TrEMBL
Match: A0A7N2L0N3 (HMA domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.0e-32 Identity = 86/137 (62.77%), Postives = 98/137 (71.53%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy TrEMBL
Match: A0A2N9H2C1 (HMA domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33661 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.8e-32 Identity = 88/137 (64.23%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy TrEMBL
Match: A0A061GN86 (Heavy metal transport/detoxification superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_037922 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 8.9e-32 Identity = 81/135 (60.00%), Postives = 100/135 (74.07%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy TrEMBL
Match: A0A6P4ASC0 (heavy metal-associated isoprenylated plant protein 45 isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC107431855 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31 Identity = 83/139 (59.71%), Postives = 103/139 (74.10%), Query Frame = 0
BLAST of Sed0023247 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31 Identity = 79/146 (54.11%), Postives = 100/146 (68.49%), Query Frame = 0
BLAST of Sed0023247 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 126.7 bits (317), Expect = 1.4e-29 Identity = 70/143 (48.95%), Postives = 94/143 (65.73%), Query Frame = 0
BLAST of Sed0023247 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 87.4 bits (215), Expect = 9.4e-18 Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Sed0023247 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0023247 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0023247 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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