Sed0023202 (gene) Chayote v1

Overview


Name	Sed0023202
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG09: 24462814 .. 24463254 (+)
RNA-Seq Expression	Sed0023202
Synteny	Sed0023202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAACATGAAGATCAATCACTTTCTAATTTTCTTTGTTGTCTTGTCAATGGCCATGATCAAGCCAATGAAGGCTTCACCTCTCGAGCCTTGGCAAATTCACGTAGTGAATGGGCTAAGCAATGGCCAAATGCTTCTGGTTCATTGCAAATCCAAAGACAACGATTTCGGAGAAAAAAACATCGGTGTCGGAGCTGAATTCAGCTGGTCTTTTAGAGTAAACTTTTGGAATTCCACATTGTATTGGTGCTACTTACAAAAACCAAATGGACAATCTACGTCTTTTGAGGCCTTTTGGATTGAAAAACATTCGATTTGGCTCTATTATAAATGCTCGACCGATAAAGATTCCATTTGTACGTGGACTGCAAAAGATGATGGAATTTATCTGAGAAACAACCCCGACAAAAAGGAAATTTTTGTTCACAAGTGGGAATGA

mRNA sequence

ATGCAGAACATGAAGATCAATCACTTTCTAATTTTCTTTGTTGTCTTGTCAATGGCCATGATCAAGCCAATGAAGGCTTCACCTCTCGAGCCTTGGCAAATTCACGTAGTGAATGGGCTAAGCAATGGCCAAATGCTTCTGGTTCATTGCAAATCCAAAGACAACGATTTCGGAGAAAAAAACATCGGTGTCGGAGCTGAATTCAGCTGGTCTTTTAGAGTAAACTTTTGGAATTCCACATTGTATTGGTGCTACTTACAAAAACCAAATGGACAATCTACGTCTTTTGAGGCCTTTTGGATTGAAAAACATTCGATTTGGCTCTATTATAAATGCTCGACCGATAAAGATTCCATTTGTACGTGGACTGCAAAAGATGATGGAATTTATCTGAGAAACAACCCCGACAAAAAGGAAATTTTTGTTCACAAGTGGGAATGA

Coding sequence (CDS)

ATGCAGAACATGAAGATCAATCACTTTCTAATTTTCTTTGTTGTCTTGTCAATGGCCATGATCAAGCCAATGAAGGCTTCACCTCTCGAGCCTTGGCAAATTCACGTAGTGAATGGGCTAAGCAATGGCCAAATGCTTCTGGTTCATTGCAAATCCAAAGACAACGATTTCGGAGAAAAAAACATCGGTGTCGGAGCTGAATTCAGCTGGTCTTTTAGAGTAAACTTTTGGAATTCCACATTGTATTGGTGCTACTTACAAAAACCAAATGGACAATCTACGTCTTTTGAGGCCTTTTGGATTGAAAAACATTCGATTTGGCTCTATTATAAATGCTCGACCGATAAAGATTCCATTTGTACGTGGACTGCAAAAGATGATGGAATTTATCTGAGAAACAACCCCGACAAAAAGGAAATTTTTGTTCACAAGTGGGAATGA

Protein sequence

MQNMKINHFLIFFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDKKEIFVHKWE

Homology

[Close]

BLAST of Sed0023202 vs. NCBI nr
Match: XP_022143780.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52
Identity = 94/145 (64.83%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 1   MQNMKINHFLIFFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEK 60
           M+     HFL+F  V S+A+++ ++A PL  WQIHV N LSN QML VHCKSK++D GE 
Sbjct: 1   MEGRYPKHFLVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH 60

Query: 61  NIGVGAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSIC 120
           N+ VG EF+W FRVN W++TLYWCYLQKPNGQS SF+AFW+EK SIWLYYKC    +S C
Sbjct: 61  NLSVGTEFNWRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKC---LESNC 120

Query: 121 TWTAKDDGIYLRNNPDKKEIFVHKW 146
           TW AKDDGIYLRNNPD +++FVHKW
Sbjct: 121 TWKAKDDGIYLRNNPDGRDVFVHKW 142

[Close]

BLAST of Sed0023202 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-49
Identity = 88/140 (62.86%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 8   HFLIFFVVLSMAMIKPMKA-SPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGA 67
           HFL+F +VLS+ +++P++A S L+ WQIHVVNGLSNGQ L VHCKSKDND GE N+  G 
Sbjct: 13  HFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGT 72

Query: 68  EFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKD 127
           EF+W+FRVN WN+TL+WCYL KP+G+S SF+ FW+EK SIWL+Y+C     S C WTAKD
Sbjct: 73  EFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRC---YHSNCIWTAKD 132

Query: 128 DGIYLRNNPDKKEIFVHKWE 147
           DGIYLR+NP +++I VH+W+
Sbjct: 133 DGIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of Sed0023202 vs. NCBI nr
Match: XP_016902699.1 (PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo])

HSP 1 Score: 200.7 bits (509), Expect = 8.8e-48
Identity = 87/147 (59.18%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 1   MQNMKINHFLI--FFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFG 60
           M++MK NHFL+  F  VLS+A++KP KA  LE W IH+VNGLSN Q L VHC+SKD+D G
Sbjct: 29  MRSMK-NHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLG 88

Query: 61  EKNIGVGAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDS 120
           ++ + VG EF+W+F++NFW++TL+WCYLQKPN +S SFEAFW+E+ SIWL+Y+C     S
Sbjct: 89  KRYLSVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCF---KS 148

Query: 121 ICTWTAKDDGIYLRNNPDKKEIFVHKW 146
            C WTAKDDGIYL++NP  ++  VH W
Sbjct: 149 NCIWTAKDDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Sed0023202 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 197.2 bits (500), Expect = 9.8e-47
Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 10  LIFFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFS 69
           ++ F VL +AM+   KA+ L  WQIHVVNGLSNGQ+L VHCKSKDND GE  + VG EF+
Sbjct: 11  VVLFFVLCLAMLDENKAAELAKWQIHVVNGLSNGQILFVHCKSKDNDLGEHKLSVGNEFN 70

Query: 70  WSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGI 129
           W FRVNFWN+TL+WCYLQKPN Q +SF+AFWIE  S+WLY  C    DS C W AKDDG+
Sbjct: 71  WRFRVNFWNTTLFWCYLQKPNAQHSSFQAFWIESTSVWLYNMC---YDSNCIWIAKDDGV 130

Query: 130 YLRNNPDKKEIFVHKWE 147
           YL++N + +++ +HKWE
Sbjct: 131 YLKDNTNHEDVLIHKWE 144

[Close]

BLAST of Sed0023202 vs. NCBI nr
Match: XP_031745090.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45
Identity = 85/138 (61.59%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 10  LIFFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFS 69
           ++   VL +A+++  KA  LE W IHVVNGLSNGQ+LL HCKSKDND GE+ +  G EF+
Sbjct: 17  VVLLFVLCLAILEETKAVELEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFN 76

Query: 70  WSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGI 129
           W FRVNFWN+TL+WCYLQKPNGQ +SFE+FWIE  S+WLY  C    +  C WTAKDDGI
Sbjct: 77  WRFRVNFWNTTLFWCYLQKPNGQHSSFESFWIESRSVWLYTMCF---EKNCIWTAKDDGI 136

Query: 130 YLRNNPD-KKEIFVHKWE 147
           YL++N D  K+I +HKWE
Sbjct: 137 YLKDNFDTHKDILIHKWE 151

[Close]

BLAST of Sed0023202 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 29  LEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYLQK 88
           +  WQ+ VVNGL+ G+ L +HCKSK++D GE N+     FSW+F  N  +ST +WCY+ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 89  PNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDKKEIFVHKWE 147
            NG   +   FW     + L+++C       C WTAK DG+YL N+   +++   KWE
Sbjct: 98  DNGH-MNVNVFW---DDVILFHRCGWKN---CIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Sed0023202 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-22
Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 29  LEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYLQK 88
           +  WQ+ V NGL+ G+ L +HCKSK+ND G+ N+     FSW+F  N  +STL+WCY+ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 89  PNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDKKEIFVHKWE 147
            +G   + + FW     + L+++C       C WTAK+DG+YL N+   +++   KW+
Sbjct: 98  DDGH-MNVKVFW---DDVILFHRCDWKN---CVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Sed0023202 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 10  LIFFVVLSMAMIKPM----KASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVG 69
           +IF V++S+   + +    K  P++     VV    N  +L VHCKS+D+D G   +  G
Sbjct: 4   IIFIVLISLIGCETLQHDGKVFPMKGPLTRVVIYNDNDYLLGVHCKSRDDDHGFHILQKG 63

Query: 70  AEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAK 129
             + W F VNF NSTLY+C   +   +   F+ +   + S     +C       CTW AK
Sbjct: 64  GLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRDS----SRCRN-----CTWEAK 123

Query: 130 DDGIYLRNNPDKKEIFVHKW 146
           +DGIY      KK    +KW
Sbjct: 124 EDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of Sed0023202 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 41/141 (29.08%), Postives = 65/141 (46.10%), Query Frame = 0


Query: 9   FLIFFVVLSMAMIKPMK----ASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGV 68
           F++  VV+S+   + ++      P+      V     N  +L +HCKS+D+D G   +  
Sbjct: 17  FIVSIVVISLICSEALQIQEAKEPIRGHLTRVTIQNDNDYLLGIHCKSRDDDLGFHILAK 76

Query: 69  GAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTA 128
           G  F W F VNF  STLY+C   +   +   FE +   +     +Y+C+      CTW A
Sbjct: 77  GELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRD----FYRCAN-----CTWKA 136

Query: 129 KDDGIYLRNNPDKKEIFVHKW 146
           + DGIY  +    K    + W
Sbjct: 137 EKDGIYGYSEDPVKGYLFYNW 148

[Close]

BLAST of Sed0023202 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-11
Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 41  SNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFW 100
           +N  +L +HCKSKD+D G      G  + W F VNF NSTLY+C   +       F+   
Sbjct: 54  NNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDR 113

Query: 101 IEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDKKEIFVHKW 146
            E+     +Y+C       CTW AK D +Y  +N  +   +  KW
Sbjct: 114 AERD----FYRCRN-----CTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of Sed0023202 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.9e-53
Identity = 94/145 (64.83%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 1   MQNMKINHFLIFFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEK 60
           M+     HFL+F  V S+A+++ ++A PL  WQIHV N LSN QML VHCKSK++D GE 
Sbjct: 1   MEGRYPKHFLVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH 60

Query: 61  NIGVGAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSIC 120
           N+ VG EF+W FRVN W++TLYWCYLQKPNGQS SF+AFW+EK SIWLYYKC    +S C
Sbjct: 61  NLSVGTEFNWRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKC---LESNC 120

Query: 121 TWTAKDDGIYLRNNPDKKEIFVHKW 146
           TW AKDDGIYLRNNPD +++FVHKW
Sbjct: 121 TWKAKDDGIYLRNNPDGRDVFVHKW 142

[Close]

BLAST of Sed0023202 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.8e-50
Identity = 88/140 (62.86%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 8   HFLIFFVVLSMAMIKPMKA-SPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGA 67
           HFL+F +VLS+ +++P++A S L+ WQIHVVNGLSNGQ L VHCKSKDND GE N+  G 
Sbjct: 13  HFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGT 72

Query: 68  EFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKD 127
           EF+W+FRVN WN+TL+WCYL KP+G+S SF+ FW+EK SIWL+Y+C     S C WTAKD
Sbjct: 73  EFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRC---YHSNCIWTAKD 132

Query: 128 DGIYLRNNPDKKEIFVHKWE 147
           DGIYLR+NP +++I VH+W+
Sbjct: 133 DGIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of Sed0023202 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.3e-48
Identity = 87/147 (59.18%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 1   MQNMKINHFLI--FFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFG 60
           M++MK NHFL+  F  VLS+A++KP KA  LE W IH+VNGLSN Q L VHC+SKD+D G
Sbjct: 29  MRSMK-NHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLG 88

Query: 61  EKNIGVGAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDS 120
           ++ + VG EF+W+F++NFW++TL+WCYLQKPN +S SFEAFW+E+ SIWL+Y+C     S
Sbjct: 89  KRYLSVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCF---KS 148

Query: 121 ICTWTAKDDGIYLRNNPDKKEIFVHKW 146
            C WTAKDDGIYL++NP  ++  VH W
Sbjct: 149 NCIWTAKDDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Sed0023202 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45
Identity = 79/139 (56.83%), Postives = 112/139 (80.58%), Query Frame = 0


Query: 8   HFLIFFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAE 67
           HFL+  + LS+A+++P  +  L+ W IHVVNGL NG++L VHCKS+D+D GE+N+  GAE
Sbjct: 9   HFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGEQNLYDGAE 68

Query: 68  FSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDD 127
           FSW+FRVN  ++TL+WC+L+KP+ QS SF+AFW+EK SIWL+Y+C    D+ C WTAKDD
Sbjct: 69  FSWTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRC---YDANCIWTAKDD 128

Query: 128 GIYLRNNPDKKEIFVHKWE 147
           G+YLR+NP ++++ VHKW+
Sbjct: 129 GVYLRDNPVQRDVLVHKWQ 144

[Close]

BLAST of Sed0023202 vs. ExPASy TrEMBL
Match: A0A6J1HAC3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 70/140 (50.00%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 7   NHFLIFFVVLSMAMIKPMKASPLEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGA 66
           N  L+F V  ++A+     + P   W+IH+ N LSNGQ + VHCKSKDND GE  +  G 
Sbjct: 42  NQVLVFLVASALAL---AASKPFSKWEIHIKNELSNGQAMFVHCKSKDNDLGEHTLATGT 101

Query: 67  EFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKD 126
           EF W F+VNFW++TL+WCYL+KPNG   +F+AFW+EK + WL  KC     +IC WTA+D
Sbjct: 102 EFKWDFKVNFWDTTLFWCYLRKPNGHEMTFDAFWVEKRTEWLRVKCD---GNICNWTAED 161

Query: 127 DGIYLRNNPDKKEIFVHKWE 147
           +GIYL++N +  + FVH W+
Sbjct: 162 NGIYLKDNSENLDEFVHYWK 175

[Close]

BLAST of Sed0023202 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 29  LEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYLQK 88
           +  WQ+ VVNGL+ G+ L +HCKSK++D GE N+     FSW+F  N  +ST +WCY+ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 89  PNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDKKEIFVHKWE 147
            NG   +   FW     + L+++C       C WTAK DG+YL N+   +++   KWE
Sbjct: 98  DNGH-MNVNVFW---DDVILFHRCGWKN---CIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Sed0023202 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23
Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 29  LEPWQIHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYLQK 88
           +  WQ+ V NGL+ G+ L +HCKSK+ND G+ N+     FSW+F  N  +STL+WCY+ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 89  PNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDKKEIFVHKWE 147
            +G   + + FW     + L+++C       C WTAK+DG+YL N+   +++   KW+
Sbjct: 98  DDGH-MNVKVFW---DDVILFHRCDWKN---CVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Sed0023202 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-12
Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 41  SNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFW 100
           +N  +L +HCKSKD+D G      G  + W F VNF NSTLY+C   +       F+   
Sbjct: 54  NNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDR 113

Query: 101 IEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDKKEIFVHKW 146
            E+     +Y+C       CTW AK D +Y  +N  +   +  KW
Sbjct: 114 AERD----FYRCRN-----CTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of Sed0023202 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.8 bits (164), Expect = 8.3e-12
Identity = 45/126 (35.71%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 11  IFFVVLSMAMIKPMKASPLEPWQIHVVNGLS--NGQMLLVHCKSKDNDFGEKNIGVGAEF 70
           IF  V+ + MI  +     +   I V N L+  N  +L VHCKSK+ND G K + +G   
Sbjct: 6   IFLFVVGLCMISDVYG---KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVM 65

Query: 71  SWSFRVNFWNSTLYWCYLQKPNGQSTSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDG 130
           S+SF+ NFW +T +WC L K  G             +I L+ K      S   W A+DDG
Sbjct: 66  SFSFKTNFWGTTEFWCNLYK--GPDYKRYRGITAYQAIGLFAK----DGSSYNWLARDDG 122

Query: 131 IYLRNN 135
           IY   +
Sbjct: 126 IYFHKD 122

[Close]

BLAST of Sed0023202 vs. TAIR 10
Match: AT2G24870.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 40/115 (34.78%), Postives = 60/115 (52.17%), Query Frame = 0


Query: 34  IHVVNGLSNGQMLLVHCKSKDNDFGEKNIGVGAEFSWSFRVNFWNSTLYWCYL-QKPNGQ 93
           I + N L   ++L + C SKD+ FG K I +G     +F +NFW +T + C+L Q PN +
Sbjct: 10  IRITNELKFNKLLRIGCYSKDDKFGPKTIPIGKHVEINFMINFWRTTRFMCHLEQGPNYK 69

Query: 94  STSFEAFWIEKHSIWLYYKCSTDKDSICTWTAKDDGIYLRNNPDK---KEIFVHK 145
              ++ F   K S ++      D+  I  W A++DGIYL     K   K I +HK
Sbjct: 70  --HYQKFTAFKLSGFM------DEGGIWDWRAREDGIYLDKEGGKHIGKSINMHK 116

The following BLAST results are available for this feature:

BLAST of Sed0023202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143780.1	2.0e-52	64.83	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022143772.1	1.6e-49	62.86	S-protein homolog 74-like [Momordica charantia]	[more]
XP_016902699.1	8.8e-48	59.18	PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]	[more]
XP_038896594.1	9.8e-47	61.31	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_031745090.1	1.4e-45	61.59	S-protein homolog 1-like [Cucumis sativus]	[more]

BLAST of Sed0023202 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	2.1e-23	40.68	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.7e-22	38.98	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F2Q9V4	1.3e-12	32.86	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
P0DN92	1.4e-11	29.08	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
Q9FI84	4.0e-11	34.29	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]

BLAST of Sed0023202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPR8	9.9e-53	64.83	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1	[more]
A0A6J1CRU0	7.8e-50	62.86	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A1S4E390	4.3e-48	59.18	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1	[more]
A0A6J1CQH6	2.6e-45	56.83	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1	[more]
A0A6J1HAC3	1.1e-38	50.00	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1	[more]

BLAST of Sed0023202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.5e-24	40.68	S-protein homologue 1	[more]
AT4G29035.1	1.2e-23	38.98	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	2.9e-12	34.29	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	8.3e-12	35.71	Plant self-incompatibility protein S1 family	[more]
AT2G24870.1	1.9e-11	34.78	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..145 e-value: 1.4E-26 score: 93.1
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 4..145
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 4..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023202.1	Sed0023202.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region