Sed0023159 (gene) Chayote v1

Overview


Name	Sed0023159
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Glutamyl-tRNA synthetase
Location	LG11: 4198697 .. 4202607 (-)
RNA-Seq Expression	Sed0023159
Synteny	Sed0023159

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAAAATACAGACAGAAAATCAGATTGTCAGTTGTTACATTTCCCATCAATTATCACAAAAGAAGCAAAATCATTGAAAATTCCCATTTCCCATTAACCCATCAAATTGGCTGTTCATCAATTTGGAACTTTCAAATCTCCATTTCTCAATCAAACATCAAACCAAACGCAACCCAGCTTCTACTTTCTTCCAAATCCAATTGGGTCTTAATCTCCAGTCCCCATTTGGGAATTCTCATCCATTTATGTTGGAATCAAGACCAGATGTGAACAATACCTCAGATGTTGGTTGCAGCAGCGGCGTCAATGGCGACGAAGAAGACGAAATCGATGGAAGATCGGAGATGGGCAAAAGGGGTTTTGGAAAGGCGAAACAGGTGATGTTCTATCCGTTCCGAAAGGCGAAGAAACAGATTCTTCGGCGTAGGGTTAAGAGATCTTCGTCGTGTTCTTCGGTTTCTTGTAATAGAAGAACCAATTCTTCTTTGGATAAGAGGGTTTTTGATGGGGCTGTGAATCAAGGGTGTTGTTTCTGTGTGGGGAAGCTTTCGATTTCGGATTCGAAGAAAGGGTCTCCGAGTGACCCGAATTCGAGGAAGTTTACGGATGATATGTTGAAGGTTTTGATTGAGAAGAATGATTTCTATTCTAAAGACTCCAATCCTCATTTGGGTATTTGTTCGTCTTTCTTGTTGTTGAATCATGGATGCAAGTTAATGTATAATAGTTTTGTTTGCAGTTTGATGATATTGTTGTGGTTTTTTTTTTTTTTTTTTTTGATAGATGTTCGAGTGGATACTAGACAGGACCGATATATTTAATTGGATTTTGCTTGATGAGGTATGTTACTGATGTTGTTCATGGATTGATAGTTTTTTTTTTTTGATATCCGTGACTGTCAAGGTCAGCTTGTGCGCACCTCGACTAATGTCATGGGACATACTGCCTGACCCTACAACATTTGGATGTCAAGGAAACTCGTAGGAAATTAATTTTTTGGTAAGCAGCCACCATGGGTTGAACCCATCAACTTATGCACCCAAGGTCGTCTTTGACTACTTGAGCTACTCCATGAGGTCAATGAATGAATTGATAGATTTGATCGACTTTTTTGTTTTCGCTCTACTCTTTTTTGCTAAACGAATGAGGGAATTTAGGACACGATTGATAACTATTTTGTTTTTTTTTTTAAAGTTTAGCCCATAACAACAGTTCCAACCTATGGTTTTCTTTATTTTGACATCTACATTTTACTTAAAATTTGAAAACTAAAAAAATGTGGCTTCCAAAACTTTGTTGTTAATACAAGTCAATGGATAATATATTGTTTTTTTGGTTTGATGATATTGTTGTGGTTTGTTTATTGACAGCATGTTCAAGTGGACACTAGACAGGAACAATAGATTTAATTGGGTTTTGCTTGTTGAGGTATGTTGCAGATGTTGTCCATGGATTGATAGATTTGATCAACTTTTGTTTTGTTTTTTCTCTACTTCTGTTTGCTAAGCAAATGAGAGAAATTCAGTATTTGTTTGCTAAGAAAATGAGAGAAATTTAGTATTTGGTGAGAATGTGGCTTTCTGTTTGGTTTATGTTATGACAGTTGCCTATCAGTGTATCATGTATGTTCATAATTGGAATGTGTACTCAAAGGAATATATTGACCAAATTAATTTTACAGAGCATAAATGATAATACTCCACACTTTTGGGATTTGAAAATCTTGTTGAGATGGTGCGGGTGTCCTTTGTATGTAGTGGGGCGAAGCTCTAATTCCCGTTTATCATAAAAAAATCGGTTGAGTTCTACCGTTATTGAAGGAGTTTTCAGTTTTTGTTCTCTCCAAGATGAATTCGACGACTTAATGTTGTTCATGGATTGTTAGTTTGATCAACAGTTTTTTTCATCTCTTCTTTGCCAAGCGAGTGAGAGAAATTTAGTATTCGGTGAGACTGGCATTCTGTTTAGTTTTTTGAAAGTAGCATATATGTTTATAGTTGAAATATATACTTCAAAGGAATATATTGATCAATTACTTATACTGAGCAAGAATATTTACATTCCACTCTTGGAATTTGAAATTCGAGTATGAGTTCTACAATTGTTGAAGGAGTTTTTCGTAATTATATTCTTTCCAGGATGACTCATATTTATTACGTGTACAATATGCTTAAGCCCTGTTTGATAACCATTGGGTTTTTTGTTTTTGGTTTTTAAAATTTAAGCCTACAACAACTATGTTATCATAGGTTTTTTCTTACTTAGATATCTACCTCTCACCTATATTTGTAGAAACCAAACCAAAATTTGGAAACAAAAAAAAGTAGATTCCAAAAAAAGTTTGTTTTTGTTTTTAAAAGTTGATTAGTATTCACTTACTTTCTTAAGAAAAGATGAATAGATTGTAGGAAGGATGAAACACATTGTAAGAAATTTGAGTAGAAATAGACTTAAATTTCAAAAACCAAAAACAAAAAATCAAATGGTTATCAAACGAGGCTTTAATGTTTTGGATCGAGTAACATTGATGTTGAATGAGCAAAGTGATAGGTTGCATATGATCAGCAATAGTATTGTCTAAGAGCAGAGCAGGGCAGGTTGTTGAACTTTGAATGTATTGATATCATTTATGGTGTAACTGTAGTCTGTAACACTTCACTTATCTACATATGGATATATTATCCTACACTTGTTTCTCTTATTCTATATGTATGAAAATTGAGGCTTTTGTATCCAACAAACTATTTCCATGTTTTTGTTGTGGGCGTTGAACCAACATTTAATCCATGGTGACCACTAACCTGGGATTTAGTATCCTACATATTTCTCGTCAACCAAATGTAGTAGAATCATTATTTGTTTGGTGAGATTAGTCGAGGTGTTTGGAAGCTCGTTTGACATAAAAAATCTTTAAGGGGCTTTTGAATCAACTATATGGAAGTACATGGCAAATATATGCTCAATTTTCTCTCCTTTGTGCTAATTGCCCTTAAGAATGTAAAATGTACTTTCATGATGGATCTAGTGATGATCTCCATCTTGTTGGAAGGTGATTCTAATTATATTTTGATTTGACATTGAAAATGGAAAACTTAGGATCTTAAGGTCATTGAACTCTATTAAGAAACATGATTTTGTTTAGAAGATAGTATAGGACTCTACACTGAATAACTAACAAAGGATCATAAAAAGCACTTTGGTTAGCCAGTATTATTGTAATCAACCTAAAGTGATTAGGTTAATCTCAATGCACTTCATGGTCTGATCTATCAAAGGTTTTATGGAAACTTTTCTCAGAATGAATGAAAGTTTAAAAAAAGTAGCTACTTTGGAGTAGTGATGGATGCATATCTGATTTGAGAGAGCTTTTAAAAATAGTTTTTTCAAACAGTACTTGTGGGAAAAAAAGAAAGTGAGTTTTGTCATCAAAATAATCATACATACATATACATATATACATACATATACATACATATATATATATATATAGATATATATATATATATATATATACATACATATTTCTGTGTCTTATTTTTGTTTCTCCTTTTGCCCCCTCGGGCCACCGTCTCCAAGTACTGTGAAGAGTCTCAAATCCAGTCGAAATGGTGATATTTCTTTTATGGATATTTGAGTTAATTACTGCATTAGTTTAATAATATGCTTTTTTTTTTTCTACTGCAGATTGAAAATTGCTAAAAGCTGCACTTTGTTTCTGTTCAACTGATGTTAAGGTGTGGGACATGCTATCACATTGAACCTTGCATCACAATTTTCCCACTCTTGTATCAGATCCACTTTGTTCCAATTTGTTTCTTGGGTTTAAATTTATTCCATAACTGACAAGTTGAGACAGGGATGCTATCTCTCCAAAACTGGTAGTTAAGTCATATCCCAATTACGAA

mRNA sequence

AAAAAAAGAAAATACAGACAGAAAATCAGATTGTCAGTTGTTACATTTCCCATCAATTATCACAAAAGAAGCAAAATCATTGAAAATTCCCATTTCCCATTAACCCATCAAATTGGCTGTTCATCAATTTGGAACTTTCAAATCTCCATTTCTCAATCAAACATCAAACCAAACGCAACCCAGCTTCTACTTTCTTCCAAATCCAATTGGGTCTTAATCTCCAGTCCCCATTTGGGAATTCTCATCCATTTATGTTGGAATCAAGACCAGATGTGAACAATACCTCAGATGTTGGTTGCAGCAGCGGCGTCAATGGCGACGAAGAAGACGAAATCGATGGAAGATCGGAGATGGGCAAAAGGGGTTTTGGAAAGGCGAAACAGGTGATGTTCTATCCGTTCCGAAAGGCGAAGAAACAGATTCTTCGGCGTAGGGTTAAGAGATCTTCGTCGTGTTCTTCGGTTTCTTGTAATAGAAGAACCAATTCTTCTTTGGATAAGAGGGTTTTTGATGGGGCTGTGAATCAAGGGTGTTGTTTCTGTGTGGGGAAGCTTTCGATTTCGGATTCGAAGAAAGGGTCTCCGAGTGACCCGAATTCGAGGAAGTTTACGGATGATATGTTGAAGGTTTTGATTGAGAAGAATGATTTCTATTCTAAAGACTCCAATCCTCATTTGGATGTTCGAGTGGATACTAGACAGGACCGATATATTTAATTGGATTTTGCTTGATGAGCATGTTCAAGTGGACACTAGACAGGAACAATAGATTTAATTGGGTTTTGCTTGTTGAGATTGAAAATTGCTAAAAGCTGCACTTTGTTTCTGTTCAACTGATGTTAAGGTGTGGGACATGCTATCACATTGAACCTTGCATCACAATTTTCCCACTCTTGTATCAGATCCACTTTGTTCCAATTTGTTTCTTGGGTTTAAATTTATTCCATAACTGACAAGTTGAGACAGGGATGCTATCTCTCCAAAACTGGTAGTTAAGTCATATCCCAATTACGAA

Coding sequence (CDS)

ATGTTGGAATCAAGACCAGATGTGAACAATACCTCAGATGTTGGTTGCAGCAGCGGCGTCAATGGCGACGAAGAAGACGAAATCGATGGAAGATCGGAGATGGGCAAAAGGGGTTTTGGAAAGGCGAAACAGGTGATGTTCTATCCGTTCCGAAAGGCGAAGAAACAGATTCTTCGGCGTAGGGTTAAGAGATCTTCGTCGTGTTCTTCGGTTTCTTGTAATAGAAGAACCAATTCTTCTTTGGATAAGAGGGTTTTTGATGGGGCTGTGAATCAAGGGTGTTGTTTCTGTGTGGGGAAGCTTTCGATTTCGGATTCGAAGAAAGGGTCTCCGAGTGACCCGAATTCGAGGAAGTTTACGGATGATATGTTGAAGGTTTTGATTGAGAAGAATGATTTCTATTCTAAAGACTCCAATCCTCATTTGGATGTTCGAGTGGATACTAGACAGGACCGATATATTTAA

Protein sequence

MLESRPDVNNTSDVGCSSGVNGDEEDEIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQDRYI

Homology

[Close]

BLAST of Sed0023159 vs. NCBI nr
Match: XP_011648888.1 (uncharacterized protein LOC101216013 [Cucumis sativus] >XP_031736788.1 uncharacterized protein LOC101216013 [Cucumis sativus] >KGN61038.1 hypothetical protein Csa_021211 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 6.9e-51
Identity = 120/173 (69.36%), Postives = 134/173 (77.46%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGK 60
           MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGK
Sbjct: 1   MLESRHAENNISDVGC-SGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGK 60

Query: 61  AKQVMFYPFRKAKKQILRRRVKRSSSC----SSVSCNRRTNSSLDKRVFDGAVNQGCCFC 120
           AKQVMFYPFRKAKKQILRRR+KR SSC    SSV+C+RRTN SLDKR FDG+VNQGC FC
Sbjct: 61  AKQVMFYPFRKAKKQILRRRIKRDSSCSSSSSSVTCSRRTN-SLDKRGFDGSVNQGCGFC 120

Query: 121 VGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ 151
           + KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPH DV+VDTRQ
Sbjct: 121 LTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHFDVQVDTRQ 171

[Close]

BLAST of Sed0023159 vs. NCBI nr
Match: XP_008452984.1 (PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 2.6e-50
Identity = 121/179 (67.60%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGK 60
           MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGK
Sbjct: 1   MLESRHAENNISDVGC-SGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGK 60

Query: 61  AKQVMFYPFRKAKKQILRRRVKRSSSCS----------SVSCNRRTNSSLDKRVFDGAVN 120
           AKQVMFYPFRKAKKQILRRR+KR SSCS          SV C+RRTN SLDKR FDG+VN
Sbjct: 61  AKQVMFYPFRKAKKQILRRRIKRGSSCSSSSPCSSSSPSVICSRRTN-SLDKRGFDGSVN 120

Query: 121 QGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ 151
           QGC FC+ KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV+VDTRQ
Sbjct: 121 QGCGFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVQVDTRQ 177

[Close]

BLAST of Sed0023159 vs. NCBI nr
Match: XP_038890967.1 (uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890968.1 uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890969.1 uncharacterized protein LOC120080390 [Benincasa hispida])

HSP 1 Score: 204.5 bits (519), Expect = 6.5e-49
Identity = 117/171 (68.42%), Postives = 133/171 (77.78%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCS-SGVNGDEED-----------------EIDGRSEMGKRGFGKA 60
           MLESR   NN SDVGCS +  +GD+ED                 + D + EMGK+GFGKA
Sbjct: 1   MLESRHAENNISDVGCSGANDDGDDEDDETRKTMANTQIRHDEFDDDRKMEMGKKGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRVK-RSSSC--SSVSCNRRTNSSLDKRVFDGAVNQGCCFCVG 120
           KQVMFYPFRKAKKQILRRR+K  SSSC  SSV+C R+TNSS DKR FDG+VNQGC FC  
Sbjct: 61  KQVMFYPFRKAKKQILRRRIKSASSSCSSSSVTCTRKTNSS-DKRGFDGSVNQGCGFCFT 120

Query: 121 KLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ 151
           KLSISDSK GSP+DPN+RKFT++MLKVLIEKNDFYSK+SNPHLDV+VDTRQ
Sbjct: 121 KLSISDSKNGSPTDPNNRKFTNEMLKVLIEKNDFYSKESNPHLDVQVDTRQ 170

[Close]

BLAST of Sed0023159 vs. NCBI nr
Match: KAG6599154.1 (hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43
Identity = 110/164 (67.07%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFY 60
           MLES    N+ SDVGC SGVN D +DE D R            ++GK +GFGKAK+VM Y
Sbjct: 1   MLESGNAENHLSDVGC-SGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLY 60

Query: 61  PFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSIS 120
           PFRKAKKQILRRR+KR SSSC   SSV C RRT+SS DKRVFDG+VNQGC FC  KLSIS
Sbjct: 61  PFRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSS-DKRVFDGSVNQGCGFCFMKLSIS 120

Query: 121 DSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT 149
           DSK G P+DPN RKF+++MLKVLIEKNDFYSK+SNPHLDV + T
Sbjct: 121 DSKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGT 162

[Close]

BLAST of Sed0023159 vs. NCBI nr
Match: XP_022999773.1 (uncharacterized protein LOC111494022 [Cucurbita maxima] >XP_022999774.1 uncharacterized protein LOC111494022 [Cucurbita maxima])

HSP 1 Score: 185.7 bits (470), Expect = 3.1e-43
Identity = 110/164 (67.07%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFY 60
           MLES    N+ SDVGC SGVN D +DE + R            ++GK +GFGKAK+VM Y
Sbjct: 1   MLESGNAENHLSDVGC-SGVNDDGDDEDNERRKSMAKGQIIAPDLGKQKGFGKAKRVMLY 60

Query: 61  PFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSIS 120
           PFRKAKKQILRRR+KR SSSC   SSV C RRT+SS DKRVFDG+VNQGC FC  KLSIS
Sbjct: 61  PFRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSS-DKRVFDGSVNQGCGFCFMKLSIS 120

Query: 121 DSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT 149
           DSK G P+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV + T
Sbjct: 121 DSKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGT 162

[Close]

BLAST of Sed0023159 vs. ExPASy TrEMBL
Match: A0A0A0LH19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51
Identity = 120/173 (69.36%), Postives = 134/173 (77.46%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGK 60
           MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGK
Sbjct: 1   MLESRHAENNISDVGC-SGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGK 60

Query: 61  AKQVMFYPFRKAKKQILRRRVKRSSSC----SSVSCNRRTNSSLDKRVFDGAVNQGCCFC 120
           AKQVMFYPFRKAKKQILRRR+KR SSC    SSV+C+RRTN SLDKR FDG+VNQGC FC
Sbjct: 61  AKQVMFYPFRKAKKQILRRRIKRDSSCSSSSSSVTCSRRTN-SLDKRGFDGSVNQGCGFC 120

Query: 121 VGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ 151
           + KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPH DV+VDTRQ
Sbjct: 121 LTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHFDVQVDTRQ 171

[Close]

BLAST of Sed0023159 vs. ExPASy TrEMBL
Match: A0A1S3BWA1 (uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50
Identity = 121/179 (67.60%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGK 60
           MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGK
Sbjct: 1   MLESRHAENNISDVGC-SGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGK 60

Query: 61  AKQVMFYPFRKAKKQILRRRVKRSSSCS----------SVSCNRRTNSSLDKRVFDGAVN 120
           AKQVMFYPFRKAKKQILRRR+KR SSCS          SV C+RRTN SLDKR FDG+VN
Sbjct: 61  AKQVMFYPFRKAKKQILRRRIKRGSSCSSSSPCSSSSPSVICSRRTN-SLDKRGFDGSVN 120

Query: 121 QGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ 151
           QGC FC+ KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV+VDTRQ
Sbjct: 121 QGCGFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVQVDTRQ 177

[Close]

BLAST of Sed0023159 vs. ExPASy TrEMBL
Match: A0A6J1KI22 (uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.5e-43
Identity = 110/164 (67.07%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFY 60
           MLES    N+ SDVGC SGVN D +DE + R            ++GK +GFGKAK+VM Y
Sbjct: 1   MLESGNAENHLSDVGC-SGVNDDGDDEDNERRKSMAKGQIIAPDLGKQKGFGKAKRVMLY 60

Query: 61  PFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSIS 120
           PFRKAKKQILRRR+KR SSSC   SSV C RRT+SS DKRVFDG+VNQGC FC  KLSIS
Sbjct: 61  PFRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSS-DKRVFDGSVNQGCGFCFMKLSIS 120

Query: 121 DSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT 149
           DSK G P+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV + T
Sbjct: 121 DSKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGT 162

[Close]

BLAST of Sed0023159 vs. ExPASy TrEMBL
Match: A0A6J1G2R9 (uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC111450262 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.0e-43
Identity = 110/164 (67.07%), Postives = 123/164 (75.00%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFY 60
           MLES    N+ SDVGC SGVN D +DE D R            ++GK +GFGKAK+VM Y
Sbjct: 1   MLESGNAENHLSDVGC-SGVNDDADDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLY 60

Query: 61  PFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSIS 120
           PFRKAKKQILRRR+KR SSSC   SSV CNRRT+SS DK VFDG+VNQGC FC  KLSIS
Sbjct: 61  PFRKAKKQILRRRIKRDSSSCSSSSSVDCNRRTSSS-DKMVFDGSVNQGCGFCFMKLSIS 120

Query: 121 DSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT 149
           D K G P+DPN RKFT+ MLKVLIEKNDFYSK+SNPHLDV + T
Sbjct: 121 DPKNGPPTDPNHRKFTNQMLKVLIEKNDFYSKESNPHLDVHMGT 162

[Close]

BLAST of Sed0023159 vs. ExPASy TrEMBL
Match: A0A6J1FAJ4 (uncharacterized protein LOC111443901 OS=Cucurbita moschata OX=3662 GN=LOC111443901 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.7e-43
Identity = 103/178 (57.87%), Postives = 123/178 (69.10%), Query Frame = 0


Query: 1   MLESRPDVNNTSDVGCSSGVNG------------------------DEEDEIDGRSEMGK 60
           M ES+   N  S V CSS VNG                        D++D+ DG++E+GK
Sbjct: 1   MFESKHIENQISAVDCSS-VNGDGDENRKRIATAEIRRDDDDDDDDDDDDDDDGKTEIGK 60

Query: 61  RGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRRTNSSLDKRVFDGAVNQGCCF 120
           +GFGKAKQVMFYPFRKAKKQILR R+KR+SSCSS   +    +S DK V+D +VNQGC F
Sbjct: 61  KGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITRTNSWDKSVYDASVNQGCGF 120

Query: 121 CVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQDRYI 155
           C  K SISDSK GSP+DPN  KFTD+MLKVLIEKNDFYSK+SNPHLD +VDT+Q+  I
Sbjct: 121 CFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLDFQVDTKQEEDI 177

[Close]

BLAST of Sed0023159 vs. TAIR 10
Match: AT3G05935.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.0e-04
Identity = 35/102 (34.31%), Postives = 47/102 (46.08%), Query Frame = 0


Query: 41  KAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGK 100
           K   ++ Y   KAKK+I+ +  +R      +S N   +S   KRV         CFC   
Sbjct: 20  KESPLLIYSVSKAKKRIVSKFRRR-----PLSPNTSPSSGFWKRV---------CFC--- 79

Query: 101 LSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHL 143
                   G   DP    F    L+VL++ NDF+SKDSNPHL
Sbjct: 80  --------GIEPDPEDDNF---KLRVLLQTNDFFSKDSNPHL 93

The following BLAST results are available for this feature:

BLAST of Sed0023159 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648888.1	6.9e-51	69.36	uncharacterized protein LOC101216013 [Cucumis sativus] >XP_031736788.1 uncharact...	[more]
XP_008452984.1	2.6e-50	67.60	PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]	[more]
XP_038890967.1	6.5e-49	68.42	uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890968.1 unchara...	[more]
KAG6599154.1	2.4e-43	67.07	hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022999773.1	3.1e-43	67.07	uncharacterized protein LOC111494022 [Cucurbita maxima] >XP_022999774.1 uncharac...	[more]

BLAST of Sed0023159 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023159 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH19	3.3e-51	69.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1	[more]
A0A1S3BWA1	1.3e-50	67.60	uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=...	[more]
A0A6J1KI22	1.5e-43	67.07	uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022...	[more]
A0A6J1G2R9	2.0e-43	67.07	uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]
A0A6J1FAJ4	5.7e-43	57.87	uncharacterized protein LOC111443901 OS=Cucurbita moschata OX=3662 GN=LOC1114439...	[more]

BLAST of Sed0023159 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05935.1	3.0e-04	34.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR35123	OS07G0633900 PROTEIN-RELATED	coord: 5..145
None	No IPR available	PANTHER	PTHR35123:SF2	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE-LIKE PROTEIN	coord: 5..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023159.3	Sed0023159.3	mRNA
Sed0023159.1	Sed0023159.1	mRNA
Sed0023159.2	Sed0023159.2	mRNA
Sed0023159.4	Sed0023159.4	mRNA