Sed0023122 (gene) Chayote v1

Overview
NameSed0023122
Typegene
OrganismSechium edule (Chayote v1)
DescriptionGibberellin-regulated protein
LocationLG06: 5770438 .. 5772489 (+)
RNA-Seq ExpressionSed0023122
SyntenySed0023122
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACACCCAATTATTTCCCACCTTCTTCTTCCTCTTTTCCCTGAAACTCCTATTTATACCCAAAACAGAGCACCTCACAAAACCCAAATCCCCATTTCCCTTTTCTTCTTCGTTCTCACTTAGCAATGGCGATGGCTAAGTTCGTTGCTGTTCTTCTCTTAGCTCTCATTGCCTTTTCGATGCTTCAAACCACTGTAAGTCTCTTCTTCCTCCAACGCTCTTCTCCGCTGAATCTTAACTCACTCTGTTTTTCTCTCTGTTTTTTTTTTTTTTTTTATGATCTGTTTCTGTAGGTTATTGCTGGTAATGGACGTCGAAACAGGGTAATGTTCTTGATTCCAACTTCCCTCTTAGTAAAACCCTTCTTTTAGATCAAGTTTTGGGGCTCAAATCAACCGTTTTGCCATTGCGGCATTTCCTCGAACAACTTGTAGTCGCACTAACATTTTGATGTTCATTCTTGTTCTTGGCTTTTTCAGAACCCATATGGACCAGGCAGCGTCAAGAGCTTCCGTGAGTAAACTAAATTCTCAACAAATTTTTCACATACCCGTTTGTTTTATAAGAAAAAAATTATTTTTTTCTATATTTTATATCTTTAATTTTGTTTGATAATCATTTAATTTTTTATTTTTTTAATAAAGAAAGACGATATAAATATAGTAAAGTGGTTGATGTTGACTTAAATTTAAGAAATAAAAAACAAAAAATAAAATAGGTATAAAAAAGATCTTAATTTTTAATTTATATATATATATATATATATATATATATATTTAATAGTTCTAGTTTCAATTTGGTTATACATTTTTAAATTGGATAATTTTAACACACTTTTTTGTCAATTTTAAATTTCAATATATGAGATGAATTAATTCTAATTTTATTTTTCAAGTGAATTTAGTTTAGACCATAATAAAATTAGGTTTTAAATCTAATGACTAAAAAGTTAAGCCAAGAGTAACTATTTTATTTTTAATTTTTGGTTTTTGAAATTTAAATTTATAACAATTATCAGATCATATATTTTCTTCTAAATAGATATCTATATTTTATTTATTTTTGTAGAAATCAAACTGAAATTAAAAAAAAAAAAAAAAAAAAAAGTTTCAAAAATTTTTTTTTTTGAGGAAAAGGTTTCAAAATATTTTTATATTTTGAAATGTTTATGAATCATATATTAGATACATTATAAATAAGATAAGCTAGCTGGTAAAAATAAGTTAAAACTTTTAAGAAACTAAACTAAATAGCAAATGGTGCCCTAGTTTTCCTTAAAAAAATGTTTTTATTAAGATGTAAATACCTTTCTTTAAGAATTAATTTTGCAATTAAAATTTAATAAACTGCAATAATTATAAGAAAAAGAAAAAAAAAATTGAACAGAAAAATTTCCCTTCTCAACCCGATCCTAACAAAAAAAAAAATGTACTTTACAAATATGAAATTAGATTTGGTGAGGTAAGGGGAGCCATTCCCGGACCTTGCTCCGCTCGATGGACGTCTCTAATTTTGAGTTACATGTTGAACAGAATGTCCAGGTCGGTGCGGTATAAGGTGCGGAAAGACACAGTACCACAAACCATGTATGTTCTTCTGCCAAAAATGCTGCAGAAAGTGCCTTTGTGTGCCCCCTGGTTACTATGGAAACAAGGCTGTGTGCCCTTGCTACAACAACTGGAAGACCAAGGAAGGTGGACCAAAATGCCCTTAACCAAACACTATCCCACATTTCCAATTTGCTCTCTTATGTTTTTGTTTTGAGATGATATTTTGTCATTGCTGTTTTTAGTGTTAGTGGCTATGGCTTATTTATTATATATTATATATATGGGTTATGAAACTTCTTGTTTCTGATTGTTGGGTTTTGTTTTTAGAATTGCAATGATTAAAGAGGGGATAATGATTCCTAATTCTTGATGTTTTTGTTCTTCTTCTTCTTCACTGTTTCCATGTGACAATATTATGATTAGTTATTACTCTGTCATCTGCCTCACATGGAATGGGTCCACATTTTTAAAACATTGGTCAAGTACTGTTTTTTGTTCCAAA

mRNA sequence

CCACACCCAATTATTTCCCACCTTCTTCTTCCTCTTTTCCCTGAAACTCCTATTTATACCCAAAACAGAGCACCTCACAAAACCCAAATCCCCATTTCCCTTTTCTTCTTCGTTCTCACTTAGCAATGGCGATGGCTAAGTTCGTTGCTGTTCTTCTCTTAGCTCTCATTGCCTTTTCGATGCTTCAAACCACTGTTATTGCTGGTAATGGACGTCGAAACAGGAACCCATATGGACCAGGCAGCGTCAAGAGCTTCCAATGTCCAGGTCGGTGCGGTATAAGGTGCGGAAAGACACAGTACCACAAACCATGTATGTTCTTCTGCCAAAAATGCTGCAGAAAGTGCCTTTGTGTGCCCCCTGGTTACTATGGAAACAAGGCTGTGTGCCCTTGCTACAACAACTGGAAGACCAAGGAAGGTGGACCAAAATGCCCTTAACCAAACACTATCCCACATTTCCAATTTGCTCTCTTATGTTTTTGTTTTGAGATGATATTTTGTCATTGCTGTTTTTAGTGTTAGTGGCTATGGCTTATTTATTATATATTATATATATGGGTTATGAAACTTCTTGTTTCTGATTGTTGGGTTTTGTTTTTAGAATTGCAATGATTAAAGAGGGGATAATGATTCCTAATTCTTGATGTTTTTGTTCTTCTTCTTCTTCACTGTTTCCATGTGACAATATTATGATTAGTTATTACTCTGTCATCTGCCTCACATGGAATGGGTCCACATTTTTAAAACATTGGTCAAGTACTGTTTTTTGTTCCAAA

Coding sequence (CDS)

ATGGCGATGGCTAAGTTCGTTGCTGTTCTTCTCTTAGCTCTCATTGCCTTTTCGATGCTTCAAACCACTGTTATTGCTGGTAATGGACGTCGAAACAGGAACCCATATGGACCAGGCAGCGTCAAGAGCTTCCAATGTCCAGGTCGGTGCGGTATAAGGTGCGGAAAGACACAGTACCACAAACCATGTATGTTCTTCTGCCAAAAATGCTGCAGAAAGTGCCTTTGTGTGCCCCCTGGTTACTATGGAAACAAGGCTGTGTGCCCTTGCTACAACAACTGGAAGACCAAGGAAGGTGGACCAAAATGCCCTTAA

Protein sequence

MAMAKFVAVLLLALIAFSMLQTTVIAGNGRRNRNPYGPGSVKSFQCPGRCGIRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Homology
[Close]
BLAST of Sed0023122 vs. NCBI nr
Match: XP_022935665.1 (gibberellin-regulated protein 4-like [Cucurbita moschata] >XP_022983885.1 gibberellin-regulated protein 4 [Cucurbita maxima] >XP_023528273.1 gibberellin-regulated protein 4-like [Cucurbita pepo subsp. pepo] >KAG6580967.1 Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210.3 bits (534), Expect = 8.0e-51
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGR--RNRNPYGPGSVKSFQCPGRCGIRCGKTQ 60
           MAMAKF AVLLLALIAFSMLQTTV+AGNGR  R+RNPYGPGSVK FQCP RC  RCG+TQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]
BLAST of Sed0023122 vs. NCBI nr
Match: XP_038903602.1 (gibberellin-regulated protein 4 [Benincasa hispida])

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50
Identity = 93/104 (89.42%), Postives = 97/104 (93.27%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGRRNRNPYGPGSVKSFQCPGRCGIRCGKTQYH 60
           MAM KF A+LLLALIA SMLQTTV+AG+G RNRNPYGPGSVKSFQCP RC  RCG+TQYH
Sbjct: 1   MAMPKFAALLLLALIALSMLQTTVMAGSGGRNRNPYGPGSVKSFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]
BLAST of Sed0023122 vs. NCBI nr
Match: XP_004147472.1 (gibberellin-regulated protein 4 [Cucumis sativus] >KGN59572.1 hypothetical protein Csa_002031 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGRRNRNPYGPGSVKSFQCPGRCGIRCGKTQYH 60
           MAM KF A+LLLALIA SMLQT V+AG G RNRNPYGPGSVK+FQCP RC  RCG+TQYH
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]
BLAST of Sed0023122 vs. NCBI nr
Match: XP_022933448.1 (gibberellin-regulated protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 8.2e-48
Identity = 88/106 (83.02%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGR--RNRNPYGPGSVKSFQCPGRCGIRCGKTQ 60
           MAMAKF A+L+L+LIA SM +TTV+AGNGR  RNRNPYGPGSV  +QCP RC  RCG+TQ
Sbjct: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 108

[Close]
BLAST of Sed0023122 vs. NCBI nr
Match: KAG6588372.1 (Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.3 bits (508), Expect = 8.2e-48
Identity = 88/106 (83.02%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGR--RNRNPYGPGSVKSFQCPGRCGIRCGKTQ 60
           MAMAKF A+L+L+LIA SM +TTV+AGNGR  RNRNPYGPGSV  +QCP RC  RCG+TQ
Sbjct: 58  MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 117

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 118 YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 163

[Close]
BLAST of Sed0023122 vs. ExPASy Swiss-Prot
Match: P46690 (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana OX=3702 GN=GASA4 PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 8.3e-35
Identity = 69/106 (65.09%), Postives = 79/106 (74.53%), Query Frame = 0 

Query: 3   MAK-FVAVLLLALIAFSMLQTTVIAGNG---RRNRNPYGPGSVKSFQCPGRCGIRCGKTQ 62
           MAK + A+ LL LI   MLQT V+A +G   + ++  YGPGS+K  QCP  C  RC KTQ
Sbjct: 1   MAKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQ 60

Query: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHK C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 61  YHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]
BLAST of Sed0023122 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 9.2e-34
Identity = 63/102 (61.76%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 3   MAKFVAVLLLALIAFSMLQTTVIAGNGRRNRNPYGPGSVKSFQCPGRCGIRCGKTQYHKP 62
           MAK +   LL  I F+ +  T ++     +   YGPGS+KS+QC G+C  RC  T+YHKP
Sbjct: 1   MAKLITSFLLLTILFTFVCLT-MSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKP 60

Query: 63  CMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           CMFFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 61  CMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]
BLAST of Sed0023122 vs. ExPASy Swiss-Prot
Match: A8MR46 (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-26
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 45  QCPGRCGIRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104
           +C  RCG RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]
BLAST of Sed0023122 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.0e-26
Identity = 46/68 (67.65%), Postives = 51/68 (75.00%), Query Frame = 0 

Query: 37  GPGSVKSFQCPGRCGIRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 96
           G G +K  QC  +C  RC  T + KPCMFFC KCC+KCLCVPPG +GNK  CPCYNNWKT
Sbjct: 30  GGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 89

Query: 97  KEGGPKCP 105
           KEG PKCP
Sbjct: 90  KEGRPKCP 97

[Close]
BLAST of Sed0023122 vs. ExPASy Swiss-Prot
Match: P27057 (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-25
Identity = 57/112 (50.89%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 3   MAKFVAVLLLALIAFSMLQTTVIAGN--------GRRNRNPYG--PGSVKSFQCPGRCGI 62
           MA  ++++L  L+   + Q  V   N         +RN   YG   G +    C  +C  
Sbjct: 1   MAGKMSIVLFVLLVVFLTQNQVSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTY 60

Query: 63  RCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           RC KT Y KPCMFFCQKCC KCLCVP G YGNK  CPCYNNWKTK GGPKCP
Sbjct: 61  RCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112

[Close]
BLAST of Sed0023122 vs. ExPASy TrEMBL
Match: A0A6J1J761 (gibberellin-regulated protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111482365 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.9e-51
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGR--RNRNPYGPGSVKSFQCPGRCGIRCGKTQ 60
           MAMAKF AVLLLALIAFSMLQTTV+AGNGR  R+RNPYGPGSVK FQCP RC  RCG+TQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]
BLAST of Sed0023122 vs. ExPASy TrEMBL
Match: A0A6J1FBA5 (gibberellin-regulated protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111442454 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.9e-51
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGR--RNRNPYGPGSVKSFQCPGRCGIRCGKTQ 60
           MAMAKF AVLLLALIAFSMLQTTV+AGNGR  R+RNPYGPGSVK FQCP RC  RCG+TQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]
BLAST of Sed0023122 vs. ExPASy TrEMBL
Match: A0A0A0LG20 (Gip1-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G826660 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGRRNRNPYGPGSVKSFQCPGRCGIRCGKTQYH 60
           MAM KF A+LLLALIA SMLQT V+AG G RNRNPYGPGSVK+FQCP RC  RCG+TQYH
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]
BLAST of Sed0023122 vs. ExPASy TrEMBL
Match: A0A6J1F4S2 (gibberellin-regulated protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440860 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.0e-48
Identity = 88/106 (83.02%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MAMAKFVAVLLLALIAFSMLQTTVIAGNGR--RNRNPYGPGSVKSFQCPGRCGIRCGKTQ 60
           MAMAKF A+L+L+LIA SM +TTV+AGNGR  RNRNPYGPGSV  +QCP RC  RCG+TQ
Sbjct: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 108

[Close]
BLAST of Sed0023122 vs. ExPASy TrEMBL
Match: A0A4V6A7Y4 (Gip1-like protein OS=Populus alba OX=43335 GN=D5086_0000179890 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.7e-46
Identity = 89/107 (83.18%), Postives = 94/107 (87.85%), Query Frame = 0 

Query: 2   AMAKFVAVLLLALIAFSMLQTTVIAGNGR----RNRNPYGPGSVKSFQCPGRCGIRCGKT 61
           AMAKFVAV LLALIA SMLQT V+A +GR    +NRN YGPGS+KSFQCP +C  RC KT
Sbjct: 30  AMAKFVAVFLLALIAISMLQTLVVASHGRGGHHKNRNQYGPGSLKSFQCPSQCTRRCSKT 89

Query: 62  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 90  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 136

[Close]
BLAST of Sed0023122 vs. TAIR 10
Match: AT5G15230.1 (GAST1 protein homolog 4 )

HSP 1 Score: 147.5 bits (371), Expect = 5.9e-36
Identity = 69/106 (65.09%), Postives = 79/106 (74.53%), Query Frame = 0 

Query: 3   MAK-FVAVLLLALIAFSMLQTTVIAGNG---RRNRNPYGPGSVKSFQCPGRCGIRCGKTQ 62
           MAK + A+ LL LI   MLQT V+A +G   + ++  YGPGS+K  QCP  C  RC KTQ
Sbjct: 1   MAKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQ 60

Query: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHK C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 61  YHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]
BLAST of Sed0023122 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 144.1 bits (362), Expect = 6.5e-35
Identity = 63/102 (61.76%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 3   MAKFVAVLLLALIAFSMLQTTVIAGNGRRNRNPYGPGSVKSFQCPGRCGIRCGKTQYHKP 62
           MAK +   LL  I F+ +  T ++     +   YGPGS+KS+QC G+C  RC  T+YHKP
Sbjct: 1   MAKLITSFLLLTILFTFVCLT-MSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKP 60

Query: 63  CMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           CMFFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 61  CMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]
BLAST of Sed0023122 vs. TAIR 10
Match: AT5G15230.2 (GAST1 protein homolog 4 )

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-32
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 28  NGRRNRNPYGPGSVKSFQCPGRCGIRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAV 87
           N + ++  YGPGS+K  QCP  C  RC KTQYHK C+ FC KCCRKCLCVPPGYYGNK V
Sbjct: 7   NVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQV 66

Query: 88  CPCYNNWKTKEGGPKCP 105
           C CYNNWKT+EGGPKCP
Sbjct: 67  CSCYNNWKTQEGGPKCP 83

[Close]
BLAST of Sed0023122 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 120.6 bits (301), Expect = 7.7e-28
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 45  QCPGRCGIRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104
           +C  RCG RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]
BLAST of Sed0023122 vs. TAIR 10
Match: AT3G02885.1 (GAST1 protein homolog 5 )

HSP 1 Score: 117.9 bits (294), Expect = 5.0e-27
Identity = 46/68 (67.65%), Postives = 51/68 (75.00%), Query Frame = 0 

Query: 37  GPGSVKSFQCPGRCGIRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 96
           G G +K  QC  +C  RC  T + KPCMFFC KCC+KCLCVPPG +GNK  CPCYNNWKT
Sbjct: 30  GGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 89

Query: 97  KEGGPKCP 105
           KEG PKCP
Sbjct: 90  KEGRPKCP 97

The following BLAST results are available for this feature:
BLAST of Sed0023122 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022935665.18.0e-5190.57gibberellin-regulated protein 4-like [Cucurbita moschata] >XP_022983885.1 gibber... [more]
XP_038903602.11.4e-5089.42gibberellin-regulated protein 4 [Benincasa hispida][more]
XP_004147472.11.5e-4987.50gibberellin-regulated protein 4 [Cucumis sativus] >KGN59572.1 hypothetical prote... [more]
XP_022933448.18.2e-4883.02gibberellin-regulated protein 4-like isoform X2 [Cucurbita moschata][more]
KAG6588372.18.2e-4883.02Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Sed0023122 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P466908.3e-3565.09Gibberellin-regulated protein 4 OS=Arabidopsis thaliana OX=3702 GN=GASA4 PE=1 SV... [more]
Q6NMQ79.2e-3461.76Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV... [more]
A8MR461.1e-2678.33Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 ... [more]
Q84J957.0e-2667.65Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV... [more]
P270571.2e-2550.89Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1[more]
BLAST of Sed0023122 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J7613.9e-5190.57gibberellin-regulated protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111482365 PE=3... [more]
A0A6J1FBA53.9e-5190.57gibberellin-regulated protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114424... [more]
A0A0A0LG207.3e-5087.50Gip1-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G826660 PE=3 SV=1[more]
A0A6J1F4S24.0e-4883.02gibberellin-regulated protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A4V6A7Y41.7e-4683.18Gip1-like protein OS=Populus alba OX=43335 GN=D5086_0000179890 PE=3 SV=1[more]
BLAST of Sed0023122 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G15230.15.9e-3665.09GAST1 protein homolog 4 [more]
AT1G74670.16.5e-3561.76Gibberellin-regulated family protein [more]
AT5G15230.21.4e-3271.43GAST1 protein homolog 4 [more]
AT3G10185.17.7e-2878.33Gibberellin-regulated family protein [more]
AT3G02885.15.0e-2767.65GAST1 protein homolog 5 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003854Gibberellin regulated proteinPFAMPF02704GASAcoord: 45..104
e-value: 1.2E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR23201:SF69GIBBERELLIN-REGULATED FAMILY PROTEINcoord: 1..104
NoneNo IPR availablePANTHERPTHR23201EXTENSIN, PROLINE-RICH PROTEINcoord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0023122.1Sed0023122.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009739 response to gibberellin
cellular_component GO:0016021 integral component of membrane