Sed0023040 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTATCTCTCTGTTTCTTCTAACACCGCCACCGCCACCCTTCTTCCACCGCCGCACCGCCGTCGTTTCCCCCAAATTCAGGTCAATTTCAGCCATTTCCCCACCACAGCTCCGCCGTAAGGGGGCACCAAGATGTGTAAGTCAGGGTGGCTGGGAGGGCTCTCCGGCGGAGTTGGAGAGAGAAGAGTGGATGAAGCTAGGGAGGCTGGAGGCCAAGTGCGGCGGCGGCGAACAGGGAGTGGTGGAGATGCTCGAGTGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGACCCTAATGATTACAATAGAAGGGCTAAGATTTTCAGTACCAGTTCTAGAGTTTTTCAAGCTCTCAAACAACAACATTCTCAAGATGAACATGAAGAAGAAGACAGAGAGGAAAAAGAACAAGGATGA ATGCCTATCTCTCTGTTTCTTCTAACACCGCCACCGCCACCCTTCTTCCACCGCCGCACCGCCGTCGTTTCCCCCAAATTCAGGTCAATTTCAGCCATTTCCCCACCACAGCTCCGCCGTAAGGGGGCACCAAGATGTGTAAGTCAGGGTGGCTGGGAGGGCTCTCCGGCGGAGTTGGAGAGAGAAGAGTGGATGAAGCTAGGGAGGCTGGAGGCCAAGTGCGGCGGCGGCGAACAGGGAGTGGTGGAGATGCTCGAGTGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGACCCTAATGATTACAATAGAAGGGCTAAGATTTTCAGTACCAGTTCTAGAGTTTTTCAAGCTCTCAAACAACAACATTCTCAAGATGAACATGAAGAAGAAGACAGAGAGGAAAAAGAACAAGGATGA ATGCCTATCTCTCTGTTTCTTCTAACACCGCCACCGCCACCCTTCTTCCACCGCCGCACCGCCGTCGTTTCCCCCAAATTCAGGTCAATTTCAGCCATTTCCCCACCACAGCTCCGCCGTAAGGGGGCACCAAGATGTGTAAGTCAGGGTGGCTGGGAGGGCTCTCCGGCGGAGTTGGAGAGAGAAGAGTGGATGAAGCTAGGGAGGCTGGAGGCCAAGTGCGGCGGCGGCGAACAGGGAGTGGTGGAGATGCTCGAGTGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGACCCTAATGATTACAATAGAAGGGCTAAGATTTTCAGTACCAGTTCTAGAGTTTTTCAAGCTCTCAAACAACAACATTCTCAAGATGAACATGAAGAAGAAGACAGAGAGGAAAAAGAACAAGGATGA MPISLFLLTPPPPPFFHRRTAVVSPKFRSISAISPPQLRRKGAPRCVSQGGWEGSPAELEREEWMKLGRLEAKCGGGEQGVVEMLECLEREAIMGEDEGRDPNDYNRRAKIFSTSSRVFQALKQQHSQDEHEEEDREEKEQG Homology
BLAST of Sed0023040 vs. NCBI nr
Match: XP_022942933.1 (uncharacterized protein LOC111447817 [Cucurbita moschata] >KAG6600868.1 hypothetical protein SDJN03_06101, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031503.1 hypothetical protein SDJN02_05543, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41 Identity = 94/126 (74.60%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of Sed0023040 vs. NCBI nr
Match: XP_022941969.1 (uncharacterized protein LOC111447176 [Cucurbita moschata]) HSP 1 Score: 178.3 bits (451), Expect = 4.6e-41 Identity = 97/135 (71.85%), Postives = 109/135 (80.74%), Query Frame = 0
BLAST of Sed0023040 vs. NCBI nr
Match: XP_023541783.1 (uncharacterized protein LOC111801831 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.6 bits (449), Expect = 7.8e-41 Identity = 96/135 (71.11%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of Sed0023040 vs. NCBI nr
Match: XP_022988679.1 (uncharacterized protein LOC111485933 [Cucurbita maxima]) HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40 Identity = 94/136 (69.12%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of Sed0023040 vs. NCBI nr
Match: XP_023547061.1 (uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.1 bits (440), Expect = 8.6e-40 Identity = 91/131 (69.47%), Postives = 101/131 (77.10%), Query Frame = 0
BLAST of Sed0023040 vs. ExPASy TrEMBL
Match: A0A6J1FW01 (uncharacterized protein LOC111447817 OS=Cucurbita moschata OX=3662 GN=LOC111447817 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 7.6e-42 Identity = 94/126 (74.60%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of Sed0023040 vs. ExPASy TrEMBL
Match: A0A6J1FPZ7 (uncharacterized protein LOC111447176 OS=Cucurbita moschata OX=3662 GN=LOC111447176 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.2e-41 Identity = 97/135 (71.85%), Postives = 109/135 (80.74%), Query Frame = 0
BLAST of Sed0023040 vs. ExPASy TrEMBL
Match: A0A6J1JM89 (uncharacterized protein LOC111485933 OS=Cucurbita maxima OX=3661 GN=LOC111485933 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40 Identity = 94/136 (69.12%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of Sed0023040 vs. ExPASy TrEMBL
Match: A0A6J1D0H7 (uncharacterized protein LOC111015926 OS=Momordica charantia OX=3673 GN=LOC111015926 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.5e-37 Identity = 93/130 (71.54%), Postives = 102/130 (78.46%), Query Frame = 0
BLAST of Sed0023040 vs. ExPASy TrEMBL
Match: A0A0A0KQQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223100 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35 Identity = 81/131 (61.83%), Postives = 95/131 (72.52%), Query Frame = 0
BLAST of Sed0023040 vs. TAIR 10
Match: AT5G05220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 80.9 bits (198), Expect = 9.3e-16 Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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