Sed0022961 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCTCACAGTGCCTAAAATCTCTTCTTTTACACATTTTCTGAACTCTGAACCCTCACCCTTCCCTTCTCTTTTCCTACTTGTTCTCATCTTCACCTTCCATGTCCCGACATGTCGTTTCTTCTCTTACTTCCTTCTTCCAAGGCCTTACTACAATTGTGCTGGCCATGGTAAGAGCCTCTGCTATCCCATTGCAATATCCCATCCCAAAGGATTGTTTTGTGGTGGTTGGGCTTTACGAGCGGCACCAATCGCCTTACTTGTGGCGGTGAGTTGGTTGACGGAGGAGGACTCGGCAGGAGGTGCTGCTGGGAACTGGGGGTCTAGAGGCTGCCGTGTTCCGACCATTTCGGTGCACGGAATGAGGGAAAGCAAGGCAGAGGCTGGAGAAATGGGTGGCTGTACTCCTTGGATTCTAGTGGGAATGATTCTGCTCCTATTCAGTATGGCTCAACGCCAAGCTCTCATTCAGCATTGCTTGTTCGTTAGAAGTATGTGA ATGATTCTCACAGTGCCTAAAATCTCTTCTTTTACACATTTTCTGAACTCTGAACCCTCACCCTTCCCTTCTCTTTTCCTACTTGTTCTCATCTTCACCTTCCATGTCCCGACATGTCGTTTCTTCTCTTACTTCCTTCTTCCAAGGCCTTACTACAATTGTGCTGGCCATGGTAAGAGCCTCTGCTATCCCATTGCAATATCCCATCCCAAAGGATTGTTTTGTGGTGGTTGGGCTTTACGAGCGGCACCAATCGCCTTACTTGTGGCGGTGAGTTGGTTGACGGAGGAGGACTCGGCAGGAGGTGCTGCTGGGAACTGGGGGTCTAGAGGCTGCCGTGTTCCGACCATTTCGGTGCACGGAATGAGGGAAAGCAAGGCAGAGGCTGGAGAAATGGGTGGCTGTACTCCTTGGATTCTAGTGGGAATGATTCTGCTCCTATTCAGTATGGCTCAACGCCAAGCTCTCATTCAGCATTGCTTGTTCGTTAGAAGTATGTGA ATGATTCTCACAGTGCCTAAAATCTCTTCTTTTACACATTTTCTGAACTCTGAACCCTCACCCTTCCCTTCTCTTTTCCTACTTGTTCTCATCTTCACCTTCCATGTCCCGACATGTCGTTTCTTCTCTTACTTCCTTCTTCCAAGGCCTTACTACAATTGTGCTGGCCATGGTAAGAGCCTCTGCTATCCCATTGCAATATCCCATCCCAAAGGATTGTTTTGTGGTGGTTGGGCTTTACGAGCGGCACCAATCGCCTTACTTGTGGCGGTGAGTTGGTTGACGGAGGAGGACTCGGCAGGAGGTGCTGCTGGGAACTGGGGGTCTAGAGGCTGCCGTGTTCCGACCATTTCGGTGCACGGAATGAGGGAAAGCAAGGCAGAGGCTGGAGAAATGGGTGGCTGTACTCCTTGGATTCTAGTGGGAATGATTCTGCTCCTATTCAGTATGGCTCAACGCCAAGCTCTCATTCAGCATTGCTTGTTCGTTAGAAGTATGTGA MILTVPKISSFTHFLNSEPSPFPSLFLLVLIFTFHVPTCRFFSYFLLPRPYYNCAGHGKSLCYPIAISHPKGLFCGGWALRAAPIALLVAVSWLTEEDSAGGAAGNWGSRGCRVPTISVHGMRESKAEAGEMGGCTPWILVGMILLLFSMAQRQALIQHCLFVRSM Homology
BLAST of Sed0022961 vs. NCBI nr
Match: KAG6573437.1 (hypothetical protein SDJN03_27324, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224.2 bits (570), Expect = 8.5e-55 Identity = 113/165 (68.48%), Postives = 130/165 (78.79%), Query Frame = 0
BLAST of Sed0022961 vs. NCBI nr
Match: KAE8653331.1 (hypothetical protein Csa_023242 [Cucumis sativus]) HSP 1 Score: 219.5 bits (558), Expect = 2.1e-53 Identity = 115/169 (68.05%), Postives = 132/169 (78.11%), Query Frame = 0
BLAST of Sed0022961 vs. NCBI nr
Match: KAA0043344.1 (hypothetical protein E6C27_scaffold110G002580 [Cucumis melo var. makuwa] >TYK02674.1 hypothetical protein E5676_scaffold1734G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52 Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 0
BLAST of Sed0022961 vs. ExPASy TrEMBL
Match: A0A0A0LW23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G554550 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.9e-53 Identity = 113/163 (69.33%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of Sed0022961 vs. ExPASy TrEMBL
Match: A0A5A7TJ52 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00210 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 8.6e-53 Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|