Sed0022947 (gene) Chayote v1

Overview


Name	Sed0022947
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Reverse transcriptase domain-containing protein
Location	LG14: 5630878 .. 5635385 (-)
RNA-Seq Expression	Sed0022947
Synteny	Sed0022947

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCCAATGAGTGGTTGGGGGAAAAACTCGAGGGATGAATATGAGGGGTGGGGAATCTCAGAGCAGAAAACCTCCAGAGAAAGGGAAGAAGAGGGAGATAATTCAGAAGCTCGGAGTGTCGATCATCTAGAATGTGTTCATGAGCAGTCGGTGATCTATAAAACAGGAAATGGAGGAGCTCAACAGAATTTAGGTGATCGGAAGGGGAAATCGGTGGTCGGAGAGGAAGAGGTCGAATCACAACGGTCAACAGCTAGGAAGGCGGCTCAGTCGAGGCTGCAGAATCGTACGATGGGGAGTGATAAGGATCTGAAATCTGACTTTGCTGCAGGGTTTCGGGATGAAAGGTCAGGGAAAGGAAAGAAGCAGGTGGTGAACTCAGGCCTAGGAGAGAGGTTGGGCTTTGTTGAGTCAGAGGTGTTTCTTGGGCTAGAGGCGTTGGATCAAATCAAAAAAGAAAAGGAAAGGGGTTTTGGGCTGGTATCTCGGCCTGGACAAGCTGATGAGGTGGAGGTAGGAGTAGAATTCCAATTTGAGGCTAACAGTGAATTTCCAAAGGAAATGGGCCTGATGCTGGGCCAAGTTGGGTTGAATAAATAAGAAAATTCCTTCAATTTGGGGCAGGAGTATTGGAAAAATTCTGGGATTAAAATTCCAGCCCCCATTAGTTTGGTTGAAAAAGGAAAAAATCTAGCTGAAGGATTAAGTGAAAATATTACAGGGCTAAAGGGCAATATCAAAGGTGATTTTCAGAACATTATTAAGGTGGGAAGGCCTAATGATCTGGAGGAAAAGATGGTAGGTAAGGTGGTAAAATGGAAGAGAAGAGCTAGAGGTGAGTCAAAAAGAGCAACATCAGAAAATGAAATGGACGAGGATGTAAATATAGAGGCTCAGTTTATTGGTAAAAAGCATGAGTTGGAAAAGAGAGATGGAGAAAATGTATCGAAAAAAATATGTAGTAGCTACGTTAGCAAGGCTGACGGGATATCGGTGGAGGCTGTAGAACATCCCTGCCGGATGCAATGAAACTCTTGTGTTGGAACGTTCGGGGGCTGGGGAGCTCCCGAGCTGTTCGGGCACTTTGTCATGAAGTGCAAAAGGCGACTCCCCTTTTAATCTTCCTTGTCGAATCTAAAGGCGGGGAGATTCTTGCAAGTAAAGTTAAAGCTGCTATTAAGTATGACAATTGCTTCTGTGTCCCTAGCATTGGACTCAGTGGAGGCTTAATGCTATTATGGAATGATATGACTGATGTTCGAGTGACTTCTTTCTCACTCGGGCATATTGATGTTATGATACAAGATGTTGGAGGATTGTGGCGGTTTACAGGTTTTTATGGTAATCCCGAGGCAGGGAAAAGGAAAGATTCGTGGGTTCTCCTGAGAAGATTACACAAGATGACGAATATTCCTTGGATCATTGGGGGAGATTTCAATGAAATTTTGGATGAGTCTGAATATGTTAATGGTCATATACGAAATGCTCAGGGGATTTGTAGGTTCCAAGAAGCAGTCAATGACTGCTCGCTTGTTGACCTGGGGCACTCGGGTGATATTTTTACTTGGAGCAGGAACAGGAACTCCCCTTCGGCTACAAAGGTGCGACTCGACAGGTTCTTGGTTTCTTATTCTCTAATTTCGAAAGTTGACAAAATTATTGTAAAGCATTTGAATTATCATTACTCTGACCATAGACCAATTTTGGCTTCTTTTAACTGGTATTCTCTTAATAGGAGTTTGTCTAGAGCTAAACATAAAATTCTGCGTTTTGAAAATTATTGGACTAACTTTGATGATTGTAGGATGATTATTAAAGATAGTTGGGATTCGGTTAAGGGATCCCCTACATCTACTTTTCAGTTTAAAGTCAATGTGAAAAATAGTCTTCTCGGGCTATCCAGCTGGAATAAAAGAAGGTTGAAAAGTTCTATAAGAGAGGCCATTACCAGAAAGGAGGCGGAATTGTCAAAGTTAAAGGCTAGCAGTTATGACAACTATTTAAGTGATATAAGAGCTCTTGAGCGTCAAATTGATTCTCTTCTTGAGGAAGAAGAAGTTTACTGGAAGCAAAGATCTAGGGAGGATTGGTTGAGGTGGGGCGACCGAAACACAAAATGGTTTCATATGCAGGCCTCCCAACGAAAAAAACGGAACATGATTGACAAGTTAAAAAACAAGGATGGCATATGGGTTGAGGATGAGGTTGGTATTTGCAAGGTAGTTCAAGACTATTTTTCTAATCTTTTTAAGAGCAAGCCAACCTCGGAGGAAGACATCAAGCTAGTTCTGGAAGGGGTGAAAAAGGTGGTGTCAGACCAGGATAATGTTCTTCTTACGCGGCCTTTTTCTAAGGCCGAGGTGGAAAGCGCTTTAAAAAGCATGAATCCTTCCAAGGCTCCGGGCCCTGATGGGACTAATGCAATGTACTATAAAAAAAATATTGGGTCGAGTTGGGCGAGGAAGTGGTTAAGATTTGCTTGAAAGTTCTTAATGAAAATTTTGATATTGCTCCTTTAAATAACACTTTCATAGCCCTTATTCCGAAGATCAAAATGCCAGGTAGAATGGAGGACTTTCGGCCAATCAGTCTATGCAATGTAATTTACAAAATTATCGCTAAAATGTTAGCCAATAGGCTGAAATCAGTGCTTAACAAGGTTATTTCTCATAATCAAGCTGCTTTTATCTCAGATAGACAAATTTCATATAATATTGTTTTGGGATTCGAGTGTATCCATTCCATCAATCAAAAGCGAAAGGGGAAGGAAGGGTTGGTGGCCCTTAAATTGGATATGAGCAAGGCCTATGATCGTGTCAGTTGGGAGTTCATTATAAAGATGATGGAAAAGTTGGGCTTTTGTGACCCTTGGATTCAAAAGATTCGGGCTTGTATTTCTTCTGTTCGATTTGCAGCTTTAGTCAACGGTTACCCATACAAGGACTTTTCTCCTGAAAGAGGTCTGAGGCAAGGAGATCCGCTCTCTCCGTACCTGTTTCTCATCTGTGCCGAAGGATTGACGACGTTACTCAATAGGGGGGAATCTCTGAACCATTTCAAAGGACTAAAGATTAATAAGTATTGCCCATCTATTTCACATTTATTTTTTGCTGATGACAGTCTTCTTTTTTTCAGGGCCTCCGAGTCTGATTGTGTGCAAATCAAAAAAATCCTTAAGGTGTATGAAAGAGCGTCTGGTCAAATTGTCAACTTGGAAAAATCTACTATGCTCTTTAGTAAGAATGTTAAAAAAGAAGCCAGGATCAGGTTAAGTAAACTCATTGGTGTTAGAATGGACAAGAATTTGGGAACTTATCTTGGTATGCCTTCTCAAAATAATAGAAGCAAGAACGCTCTCTTTGGTTCTGTGTTGTCAAGAGTTAAAAAGTGCCTTCATAACTGGAAGGGGAACCTGTTGTCGAAAGGGGGTAAAGAAATCCTCATAAAAGCTGTGGCTCAAGCTATTCCAACTTATACTATGTCCTGTTTTTGTCTCCCAAAAGGGATCTGTGAGAAGGCTAACAAGGCTTGTGCTGATTTCTGGTGGGGCTTTGACAAAGATAAGAAAAGGCAGCACTGGCCAAGCTGGTCAAAGTTAGGAAAGAGTAAGGATAGAGGCGGGTTGGGTTTTCGGAGTTTGAGCTTGTTCAACCAGGCGATGCTGGCCAAGCAAAGCTGGAGAATTATCCGTAATCCCGATACTTTACTTTTTAAGATTCTTAAGGGCAAGTATTTCAGGGATGGTGATTATATGAAAGCGCATCTCGGTAACTCCCCTTCCCTTGCCTGGCGAAGTATTTTATGGGGGCGAGATCTTTTTCAGAAGTGGTATAGATGGAAAGTTGGGAATGGAAAAAGAATTGTCATATGTAGAGACCCTTGGTTGGGAAAAGAGAATTACTCTTTAGCCATCACCGTTAAGGATCCTTGGAAAGAGTGGAAAGTAGCCAGTATTATTCATGAAGGAAATAAGTGGGATACAAATTTGATTAAGGCGATTTTCTCGAAAGAAGAGGCGGATGCTATTTGTGGTATCCTGTTGGGGTCAATGGATAGGCATGATGAAATTATCTGGAATGCAAATTCAAACAGGGTGTTTAGTGTGAAAAGTGCCTACCACTTAGATATGAACTTATCTAGAGTTGGAGAGGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTCTGAAAAATATGATCCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGTAACTGTTGTACGTTATGTGGGATGCTGAATGAAACAAATTTGCATGTGATTAAGGATTGCAAGTTTGCAGTCCATGTGTGGATGTCTATTTTTCCTGCATTAACTGACTTTATTTCTTTTTTCAGGAATGCCGACTCGGGGGAATTATTTTGGCAAGGGATTTGTGTTAAGATCCCTATCGAGGATCGGCCAAAAGCCTTAA

mRNA sequence

ATGGGCCCAATGAGTGGTTGGGGGAAAAACTCGAGGGATGAATATGAGGGGTGGGGAATCTCAGAGCAGAAAACCTCCAGAGAAAGGGAAGAAGAGGGAGATAATTCAGAAGCTCGGAGTGTCGATCATCTAGAATGTGTTCATGAGCAGTCGGTGATCTATAAAACAGGAAATGGAGGAGCTCAACAGAATTTAGGTGATCGGAAGGGGAAATCGGTGGTCGGAGAGGAAGAGGTCGAATCACAACGGTCAACAGCTAGGAAGGCGGCTCAGTCGAGGCTGCAGAATCGTACGATGGGGAGTGATAAGGATCTGAAATCTGACTTTGCTGCAGGGTTTCGGGATGAAAGGTCAGGGAAAGGAAAGAAGCAGGTGGTGAACTCAGGCCTAGGAGAGAGGTTGGGCTTTGTTGAGTCAGAGGTGTTTCTTGGGCTAGAGGCGTTGGATCAAATCAAAAAAGAAAAGGAAAGGGGTTTTGGGCTGGTATCTCGGCCTGGACAAGCTGATGAGGTGGAGGAGTATTGGAAAAATTCTGGGATTAAAATTCCAGCCCCCATTAGTTTGGTTGAAAAAGGAAAAAATCTAGCTGAAGGATTAAGTGAAAATATTACAGGGCTAAAGGGCAATATCAAAGGTGATTTTCAGAACATTATTAAGGTGGGAAGGCCTAATGATCTGGAGGAAAAGATGGTAGGTAAGGTGGTAAAATGGAAGAGAAGAGCTAGAGGTGAGTCAAAAAGAGCAACATCAGAAAATGAAATGGACGAGGATGTAAATATAGAGGCTCAGTTTATTGCCAGTATTATTCATGAAGGAAATAAGTGGGATACAAATTTGATTAAGGCGATTTTCTCGAAAGAAGAGGCGGATGCTATTTGTGGTATCCTGTTGGGGTCAATGGATAGGCATGATGAAATTATCTGGAATGCAAATTCAAACAGGGTGTTTAGTGTGAAAAGTGCCTACCACTTAGATATGAACTTATCTAGAGTTGGAGAGGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTCTGAAAAATATGATCCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGAATGCCGACTCGGGGGAATTATTTTGGCAAGGGATTTGTGTTAAGATCCCTATCGAGGATCGGCCAAAAGCCTTAA

Coding sequence (CDS)

ATGGGCCCAATGAGTGGTTGGGGGAAAAACTCGAGGGATGAATATGAGGGGTGGGGAATCTCAGAGCAGAAAACCTCCAGAGAAAGGGAAGAAGAGGGAGATAATTCAGAAGCTCGGAGTGTCGATCATCTAGAATGTGTTCATGAGCAGTCGGTGATCTATAAAACAGGAAATGGAGGAGCTCAACAGAATTTAGGTGATCGGAAGGGGAAATCGGTGGTCGGAGAGGAAGAGGTCGAATCACAACGGTCAACAGCTAGGAAGGCGGCTCAGTCGAGGCTGCAGAATCGTACGATGGGGAGTGATAAGGATCTGAAATCTGACTTTGCTGCAGGGTTTCGGGATGAAAGGTCAGGGAAAGGAAAGAAGCAGGTGGTGAACTCAGGCCTAGGAGAGAGGTTGGGCTTTGTTGAGTCAGAGGTGTTTCTTGGGCTAGAGGCGTTGGATCAAATCAAAAAAGAAAAGGAAAGGGGTTTTGGGCTGGTATCTCGGCCTGGACAAGCTGATGAGGTGGAGGAGTATTGGAAAAATTCTGGGATTAAAATTCCAGCCCCCATTAGTTTGGTTGAAAAAGGAAAAAATCTAGCTGAAGGATTAAGTGAAAATATTACAGGGCTAAAGGGCAATATCAAAGGTGATTTTCAGAACATTATTAAGGTGGGAAGGCCTAATGATCTGGAGGAAAAGATGGTAGGTAAGGTGGTAAAATGGAAGAGAAGAGCTAGAGGTGAGTCAAAAAGAGCAACATCAGAAAATGAAATGGACGAGGATGTAAATATAGAGGCTCAGTTTATTGCCAGTATTATTCATGAAGGAAATAAGTGGGATACAAATTTGATTAAGGCGATTTTCTCGAAAGAAGAGGCGGATGCTATTTGTGGTATCCTGTTGGGGTCAATGGATAGGCATGATGAAATTATCTGGAATGCAAATTCAAACAGGGTGTTTAGTGTGAAAAGTGCCTACCACTTAGATATGAACTTATCTAGAGTTGGAGAGGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTCTGAAAAATATGATCCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGAATGCCGACTCGGGGGAATTATTTTGGCAAGGGATTTGTGTTAAGATCCCTATCGAGGATCGGCCAAAAGCCTTAA

Protein sequence

MGPMSGWGKNSRDEYEGWGISEQKTSREREEEGDNSEARSVDHLECVHEQSVIYKTGNGGAQQNLGDRKGKSVVGEEEVESQRSTARKAAQSRLQNRTMGSDKDLKSDFAAGFRDERSGKGKKQVVNSGLGERLGFVESEVFLGLEALDQIKKEKERGFGLVSRPGQADEVEEYWKNSGIKIPAPISLVEKGKNLAEGLSENITGLKGNIKGDFQNIIKVGRPNDLEEKMVGKVVKWKRRARGESKRATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDIRMPTRGNYFGKGFVLRSLSRIGQKP

Homology

[Close]

BLAST of Sed0022947 vs. NCBI nr
Match: XP_035544636.1 (uncharacterized protein LOC118348020 [Juglans regia])

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-15
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 265 IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYH 324
           +  ++ EG K W+   IK+IFS+EEAD I  I L   D  D +IW  +   +FSVKSAYH
Sbjct: 735 VKDLMFEGRKVWNEGFIKSIFSEEEADLIISIPLSKRDVDDRMIWGPSKKGIFSVKSAYH 794

Query: 325 LDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI-- 384
           L+ + SRV +  +S+ +   KLW S W++      K   W    N++ TR N++SK I  
Sbjct: 795 LEESRSRVSKGESSEQNGLGKLWKSIWRLNIPGSTKNFLWKAGNNLLATRKNLRSKRIVE 854

Query: 385 DIRMP 387
           D R P
Sbjct: 855 DSRCP 859

[Close]

BLAST of Sed0022947 vs. NCBI nr
Match: XP_035551723.1 (uncharacterized protein LOC118349891 [Juglans regia])

HSP 1 Score: 94.0 bits (232), Expect = 3.3e-15
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 265 IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYH 324
           +  ++ EG K W+   IK+IFSKEEAD I  I L   D  D +IW  +   +FSVKSAYH
Sbjct: 777 VKDLMFEGRKVWNEGFIKSIFSKEEADMIISIPLSKRDVDDRMIWGPSKKGIFSVKSAYH 836

Query: 325 LDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI-- 384
           L+ + SRV    +S+ +   KLW S W +      K   W    N++ TR N++SK I  
Sbjct: 837 LEESRSRVSIGESSEQNGLGKLWKSIWGLNIPGSTKSFLWKAGNNLLATRKNLRSKRIVE 896

Query: 385 DIRMP 387
           D R P
Sbjct: 897 DSRCP 901

[Close]

BLAST of Sed0022947 vs. NCBI nr
Match: XP_035544594.1 (uncharacterized protein LOC118347987 [Juglans regia])

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-14
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 265  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHL 324
            +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W+ +   +FSV+SAYHL
Sbjct: 938  VCELMQGRGEWNTLLIRNIFNKEEADQICSIPISSMEVEDRLVWSPSKKGIFSVRSAYHL 997

Query: 325  DMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI 382
            +M   +      S +    K W+S W+++   K+KL  W    + + T+ N+  K I
Sbjct: 998  EMERKQAIRGENSRHEERVKGWDSIWELDVPRKVKLFLWKATNDFLATKKNLFLKKI 1054

[Close]

BLAST of Sed0022947 vs. NCBI nr
Match: XP_035546588.1 (uncharacterized protein LOC118348634 [Juglans regia])

HSP 1 Score: 90.5 bits (223), Expect = 3.6e-14
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 265  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHL 324
            +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W  +   +FSV+SAYHL
Sbjct: 938  VCELMQGRGEWNTLLIRNIFNKEEADQICSIPVSSMEVEDRLVWGPSKKGIFSVRSAYHL 997

Query: 325  DMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI 382
            +M   +      S +    K W+S W+++   K+KL  W    + + T+ N+  K I
Sbjct: 998  EMERKQAIRGENSRHEERVKGWDSIWELDVPRKVKLFLWKATNDFLATKKNLFLKKI 1054

[Close]

BLAST of Sed0022947 vs. NCBI nr
Match: EEC72938.1 (hypothetical protein OsI_06800 [Oryza sativa Indica Group])

HSP 1 Score: 90.5 bits (223), Expect = 3.6e-14
Identity = 44/137 (32.12%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 247 RATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEI 306
           R+ S   +    N   ++++ +I +   WDT+ I   F   +A+AI  I L S    D I
Sbjct: 349 RSFSRRPISAKRNCRLRWVSDLIDQSESWDTDKISQHFLPMDAEAILNIRLSSRLEDDFI 408

Query: 307 IWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNIL 366
            W+ +    FSV+SAYHL + L++V E S+S  + +++ WN+ WK  A  K+K+ AW  +
Sbjct: 409 AWHPDRLGRFSVRSAYHLAIALAQVDEGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAI 468

Query: 367 KNMIPTRANIQSKGIDI 384
            N +PT  N + + +++
Sbjct: 469 TNSLPTLENKKKRKLEV 485

[Close]

BLAST of Sed0022947 vs. ExPASy TrEMBL
Match: A0A6P9EBC5 (uncharacterized protein LOC118348020 OS=Juglans regia OX=51240 GN=LOC118348020 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.1e-16
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 265 IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYH 324
           +  ++ EG K W+   IK+IFS+EEAD I  I L   D  D +IW  +   +FSVKSAYH
Sbjct: 735 VKDLMFEGRKVWNEGFIKSIFSEEEADLIISIPLSKRDVDDRMIWGPSKKGIFSVKSAYH 794

Query: 325 LDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI-- 384
           L+ + SRV +  +S+ +   KLW S W++      K   W    N++ TR N++SK I  
Sbjct: 795 LEESRSRVSKGESSEQNGLGKLWKSIWRLNIPGSTKNFLWKAGNNLLATRKNLRSKRIVE 854

Query: 385 DIRMP 387
           D R P
Sbjct: 855 DSRCP 859

[Close]

BLAST of Sed0022947 vs. ExPASy TrEMBL
Match: A0A6P9F758 (uncharacterized protein LOC118349891 OS=Juglans regia OX=51240 GN=LOC118349891 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-15
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 265 IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYH 324
           +  ++ EG K W+   IK+IFSKEEAD I  I L   D  D +IW  +   +FSVKSAYH
Sbjct: 777 VKDLMFEGRKVWNEGFIKSIFSKEEADMIISIPLSKRDVDDRMIWGPSKKGIFSVKSAYH 836

Query: 325 LDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI-- 384
           L+ + SRV    +S+ +   KLW S W +      K   W    N++ TR N++SK I  
Sbjct: 837 LEESRSRVSIGESSEQNGLGKLWKSIWGLNIPGSTKSFLWKAGNNLLATRKNLRSKRIVE 896

Query: 385 DIRMP 387
           D R P
Sbjct: 897 DSRCP 901

[Close]

BLAST of Sed0022947 vs. ExPASy TrEMBL
Match: A0A6P9EAZ3 (uncharacterized protein LOC118347987 OS=Juglans regia OX=51240 GN=LOC118347987 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-14
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 265  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHL 324
            +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W+ +   +FSV+SAYHL
Sbjct: 938  VCELMQGRGEWNTLLIRNIFNKEEADQICSIPISSMEVEDRLVWSPSKKGIFSVRSAYHL 997

Query: 325  DMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI 382
            +M   +      S +    K W+S W+++   K+KL  W    + + T+ N+  K I
Sbjct: 998  EMERKQAIRGENSRHEERVKGWDSIWELDVPRKVKLFLWKATNDFLATKKNLFLKKI 1054

[Close]

BLAST of Sed0022947 vs. ExPASy TrEMBL
Match: B8AFP4 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_06800 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-14
Identity = 44/137 (32.12%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 247 RATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEI 306
           R+ S   +    N   ++++ +I +   WDT+ I   F   +A+AI  I L S    D I
Sbjct: 349 RSFSRRPISAKRNCRLRWVSDLIDQSESWDTDKISQHFLPMDAEAILNIRLSSRLEDDFI 408

Query: 307 IWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNIL 366
            W+ +    FSV+SAYHL + L++V E S+S  + +++ WN+ WK  A  K+K+ AW  +
Sbjct: 409 AWHPDRLGRFSVRSAYHLAIALAQVDEGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAI 468

Query: 367 KNMIPTRANIQSKGIDI 384
            N +PT  N + + +++
Sbjct: 469 TNSLPTLENKKKRKLEV 485

[Close]

BLAST of Sed0022947 vs. ExPASy TrEMBL
Match: A0A6P9ERU8 (uncharacterized protein LOC118348634 OS=Juglans regia OX=51240 GN=LOC118348634 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-14
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 265  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHL 324
            +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W  +   +FSV+SAYHL
Sbjct: 938  VCELMQGRGEWNTLLIRNIFNKEEADQICSIPVSSMEVEDRLVWGPSKKGIFSVRSAYHL 997

Query: 325  DMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGI 382
            +M   +      S +    K W+S W+++   K+KL  W    + + T+ N+  K I
Sbjct: 998  EMERKQAIRGENSRHEERVKGWDSIWELDVPRKVKLFLWKATNDFLATKKNLFLKKI 1054

[Close]

BLAST of Sed0022947 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-05
Identity = 27/109 (24.77%), Postives = 47/109 (43.12%), Query Frame = 0


Query: 275 WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEA 334
           WD + I     + +   I  I L    + D+IIWN N+   ++V+S Y L  +       
Sbjct: 88  WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIP 147

Query: 335 STSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDI 384
           + +    S  L    W +  +PK+K   W  L   + T   + ++G+ I
Sbjct: 148 AINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRI 196

The following BLAST results are available for this feature:

BLAST of Sed0022947 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_035544636.1	1.5e-15	40.00	uncharacterized protein LOC118348020 [Juglans regia]	[more]
XP_035551723.1	3.3e-15	40.80	uncharacterized protein LOC118349891 [Juglans regia]	[more]
XP_035544594.1	2.1e-14	34.19	uncharacterized protein LOC118347987 [Juglans regia]	[more]
XP_035546588.1	3.6e-14	34.19	uncharacterized protein LOC118348634 [Juglans regia]	[more]
EEC72938.1	3.6e-14	32.12	hypothetical protein OsI_06800 [Oryza sativa Indica Group]	[more]

BLAST of Sed0022947 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022947 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P9EBC5	7.1e-16	40.00	uncharacterized protein LOC118348020 OS=Juglans regia OX=51240 GN=LOC118348020 P...	[more]
A0A6P9F758	1.6e-15	40.80	uncharacterized protein LOC118349891 OS=Juglans regia OX=51240 GN=LOC118349891 P...	[more]
A0A6P9EAZ3	1.0e-14	34.19	uncharacterized protein LOC118347987 OS=Juglans regia OX=51240 GN=LOC118347987 P...	[more]
B8AFP4	1.7e-14	32.12	Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX...	[more]
A0A6P9ERU8	1.7e-14	34.19	uncharacterized protein LOC118348634 OS=Juglans regia OX=51240 GN=LOC118348634 P...	[more]

BLAST of Sed0022947 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	1.5e-05	24.77	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 316..383 e-value: 3.3E-6 score: 27.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..42
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 248..377
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 248..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022947.1	Sed0022947.1	mRNA