Sed0022929 (gene) Chayote v1

Overview


Name	Sed0022929
Type	gene
Organism	Sechium edule (Chayote v1)
Description	UPF0057 membrane protein
Location	LG12: 33039603 .. 33039930 (-)
RNA-Seq Expression	Sed0022929
Synteny	Sed0022929

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAGTCGCTGCGAAATCTTGTGCGAGATTCTCATCGCAATCTTGATCCCTCCATTAGGCGTCTGCTTCAGGCACGGATGTTGCACAGTTACGTCTCTCATCCTTTTTTTCCTCTTGATTTTTTGCTGCTCTTAATTTCATCACCAATCGAACGTATTCTGATTTTCCGATTGCTTGATCTTTGTAGGTTGAGTTTTGCATATGCCTTCTTTTGACGTTTCTCGGTTACGTTCCTGGAATCATCTACGCTTTGTATGTCATCGTTTTCATCGATCGCGATGAGTATTTCGATGAATATCGGCGTCCTCTTTATGCGCCGGCCTAG

mRNA sequence

ATGCCAAGTCGCTGCGAAATCTTGTGCGAGATTCTCATCGCAATCTTGATCCCTCCATTAGGCGTCTGCTTCAGGCACGGATGTTGCACAGTTGAGTTTTGCATATGCCTTCTTTTGACGTTTCTCGGTTACGTTCCTGGAATCATCTACGCTTTGTATGTCATCGTTTTCATCGATCGCGATGAGTATTTCGATGAATATCGGCGTCCTCTTTATGCGCCGGCCTAG

Coding sequence (CDS)

ATGCCAAGTCGCTGCGAAATCTTGTGCGAGATTCTCATCGCAATCTTGATCCCTCCATTAGGCGTCTGCTTCAGGCACGGATGTTGCACAGTTGAGTTTTGCATATGCCTTCTTTTGACGTTTCTCGGTTACGTTCCTGGAATCATCTACGCTTTGTATGTCATCGTTTTCATCGATCGCGATGAGTATTTCGATGAATATCGGCGTCCTCTTTATGCGCCGGCCTAG

Protein sequence

MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

Homology

[Close]

BLAST of Sed0022929 vs. NCBI nr
Match: XP_008443846.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. NCBI nr
Match: XP_022925751.1 (UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022965238.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_022965241.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_023521009.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521011.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521012.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529545.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529546.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >KAG7035687.1 UPF0057 membrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M +RCEI CEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI+FIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. NCBI nr
Match: XP_004146673.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical protein Csa_019763 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 4.1e-33
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. NCBI nr
Match: XP_038879686.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 150.6 bits (379), Expect = 5.4e-33
Identity = 71/75 (94.67%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLT LGYVPGIIYALY IVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. NCBI nr
Match: XP_018828305.1 (UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_018828306.1 UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_040997633.1 UPF0057 membrane protein At4g30660-like [Juglans microcarpa x Juglans regia] >XP_040997634.1 UPF0057 membrane protein At4g30660-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPSRCEI CEILIAIL+PPLGVCFRHGCC+VEFCICLLLT LGY+PGIIYALY IVF+DR
Sbjct: 1  MPSRCEIFCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          D+YFDEYRRPLYAPA
Sbjct: 61 DQYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-29
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPS CEILCEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVIVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Sed0022929 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-26
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M S CE+ CEI IAIL+PP+GVC RHGCCTVEF ICL+LT LGY+PGIIYA+Y I F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Sed0022929 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.5e-19
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M S  E+ CEILIAIL+PPLGVC + GCCTVEF ICL+LT LGY+PGIIYALYVIVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Sed0022929 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 8.7e-18
Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 4  RCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEY 63
          RC    EIL+AI++PPLGV  R GCC++EFCICLLLT LGYVPGIIYA+YV+V +D D+Y
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

[Close]

BLAST of Sed0022929 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-09
Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 10 EILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI 56
          +I+IAIL+PPLGV  R G C VEF ICL+LT LGY+PGIIYA+YV+
Sbjct: 8  DIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]

BLAST of Sed0022929 vs. ExPASy TrEMBL
Match: A0A1S3B9R0 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.3e-34
Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. ExPASy TrEMBL
Match: A0A6J1HL57 (UPF0057 membrane protein At4g30660-like OS=Cucurbita maxima OX=3661 GN=LOC111465149 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.0e-34
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M +RCEI CEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI+FIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. ExPASy TrEMBL
Match: A0A6J1ED38 (UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC111433066 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.0e-34
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M +RCEI CEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI+FIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. ExPASy TrEMBL
Match: A0A0A0LTR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. ExPASy TrEMBL
Match: A0A2I4F9J0 (UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC108996740 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.9e-33
Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPSRCEI CEILIAIL+PPLGVCFRHGCC+VEFCICLLLT LGY+PGIIYALY IVF+DR
Sbjct: 1  MPSRCEIFCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          D+YFDEYRRPLYAPA
Sbjct: 61 DQYFDEYRRPLYAPA 75

[Close]

BLAST of Sed0022929 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 129.8 bits (325), Expect = 9.2e-31
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPS CEILCEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVIVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Sed0022929 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 129.8 bits (325), Expect = 9.2e-31
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          MPS CEILCEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVIVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Sed0022929 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 124.0 bits (310), Expect = 5.0e-29
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M + CEI CEI+IAILIPPLGVC RHGCCT EF ICL+LT LGYVPGIIYALY IV++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DEYFDEYRRPLY 73
          D++FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of Sed0022929 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 120.2 bits (300), Expect = 7.3e-28
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M S CE+ CEI IAIL+PP+GVC RHGCCTVEF ICL+LT LGY+PGIIYA+Y I F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Sed0022929 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-20
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDR 60
          M S  E+ CEILIAIL+PPLGVC + GCCTVEF ICL+LT LGY+PGIIYALYVIVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Sed0022929 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443846.1	1.1e-33	96.00	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]	[more]
XP_022925751.1	1.9e-33	94.67	UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF...	[more]
XP_004146673.1	4.1e-33	94.67	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical pr...	[more]
XP_038879686.1	5.4e-33	94.67	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
XP_018828305.1	2.0e-32	89.33	UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_018828306.1 UPF0057 ...	[more]

BLAST of Sed0022929 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUI0	1.3e-29	82.19	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
O82232	1.0e-26	75.00	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9M095	3.5e-19	73.77	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	8.7e-18	67.19	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
Q9ZNQ7	1.5e-09	69.57	Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1	[more]

BLAST of Sed0022929 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9R0	5.3e-34	96.00	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 ...	[more]
A0A6J1HL57	9.0e-34	94.67	UPF0057 membrane protein At4g30660-like OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1ED38	9.0e-34	94.67	UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0LTR2	2.0e-33	94.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1	[more]
A0A2I4F9J0	9.9e-33	89.33	UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC10899674...	[more]

BLAST of Sed0022929 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30660.1	9.2e-31	82.19	Low temperature and salt responsive protein family	[more]
AT4G30660.2	9.2e-31	82.19	Low temperature and salt responsive protein family	[more]
AT4G28088.1	5.0e-29	77.78	Low temperature and salt responsive protein family	[more]
AT2G24040.1	7.3e-28	75.00	Low temperature and salt responsive protein family	[more]
AT4G30650.1	2.5e-20	73.77	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 8..56 e-value: 1.7E-17 score: 63.3
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF93	BNAA03G50460D PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022929.1	Sed0022929.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane