Sed0022760 (gene) Chayote v1

Overview


Name	Sed0022760
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG01: 13186009 .. 13191974 (+)
RNA-Seq Expression	Sed0022760
Synteny	Sed0022760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAATAATAGGTGAATTTTGTCGCCAAGAAAAAAACGAAAGAATTTTGTAAAAAGAAAATAGAATCTGCCAATCTCTTCCTCCGGTCTACCTCGCTTCCTTCTCCGCATCAATCGCGTTCCAATTTCGTAATACCTTTCTCCATCTTTCCTTCTTCTTCTTCTTCTACCCTCACAGTTCGAGGAATTCAAATCTTTCGGTTTCAGTTTTCATCGGAATGTCTTCATCCGGCGGCAACTCCGGCGGTGGCGCCGCCTCCCACGGCCCTCTCCTCTACTTCTGTTACACCTGCAATCGTACGGTAACCATTACTCCCTCCTCCTCCTCCTCCGATCTTGTGTGCCCCAACTGCAACGACAGCTTCGTTGAAGAAATGGAAACTCCAAACCCTAACCCTAGCCCCCTTCCCAATCCTTTCAATCCATTCACTTCCGACGCCTTTCCGCCGTTCAGCGCCGTTGCCGGTGGAAGCGGCGGTTTCCCGATCACATTCTCCACGTCGTCGTCTTCCGGTGGCATTGGCGCTGGCGGTGGCGCTGGCGGCGGCGGTTCTATGATGATGAATGATCTATCGGCGCTGTTTGGAGGCGGTTCTCTTCGATCTTCGTCCTTGCAAGATTCTGACGCTTTTAATCCTTTACTCTTTCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTAGTAATCCAAAACGCCTCGGGAGAGGCGTTTCATCCATCTTCCAATTTCAACCTCGGCGACTACTTCTTCGGCCCCGGCCTTGAGCAGTTGATTCAACAATTGGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCTGCTTCGAAGTCCGCGATTGAGGCACTGCCTAATATCAAAATTACCGATGAATTGTTGGCATCGGATTCTTCCCAGTGTGCTGTGTGTAAGGACACTTTTGAACTCGATGAGGAGGCGAAATTGATGCCTTGTAAACACATATATCATGCTGATTGTATCGTTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTTTGTCGACATGAATTGCCTACCGATGATCCGGATTACGAGCAAAGGACGCGTGGGGCTTCGACTCCTAATCGAGGTCAAAGTGAGAGTCAACCCTTCAGCGTTTCTTCTACTGGTGGGGAAAATACTGGTGGGAATGCTCCTTCGAGCGAGAATTCACAGACACAACAAATGGCTGAAAGGAGGGTGAGAAGGATAGCTTTTCCTTGGCCATTTGGTGGTTTTGGTTCAGCTGCTGAAACTAGTAATAGCGGAGGGGGCAGCAATAATCGAAGTAGCAACGAACCTAGCTCGAGAAATAGGGGAAGTGAGAACTCTTCAGAGCCTATGGAGGAAGATCTTGATTGAGGATTACTGGTATTACATCTCAAATTATTTTCTTTCCTTTTCAAATGTTATCATATCTAGTTTGTACAAACGTTTGAATTTCATACAAGTATAATTGGCAATTAAATTTCTGTTCTTTGGATGGAAAGAAAAGTAAATTTACTAGTAACCGCAATGGGCATAAAGTTTGTGCTTATGATCAAAAGGTCAACCATCATGAGTTGGCCTTATGGTCAAGTAGGCCTTGGGGAATTAAGAAGTTTTGAGTTCAATTTATGGTGGTCACATGTCCTATGTGTTTCCAGGCTATTATCTGATGAGAATAGTTGAGCTGCACATAAGGTGACTCGGACACTCATGGATATAAAAAAATAGAAGAGGTTATGAGTTCAAATCCGCATATTCTTGAACTAAAAAAGAAACTAAACTGTTACCCTTGTTCTCATCTTTGGTGAGATAGATAGCTTGGCGTTTAGACTTATATTCAAATCACCAGTTATTCCTTTTCATTGTCTTCACTATGTTTTCTGTTCTGAAGTACTTCTTAAGCCAGCTCTTTTTTCTATTTTGTTTATCTATACATGAATGGAAGGAATTCTACTTGACCACAATTTTATCTGAACCATGCTCCTATGAAATCAATTTTACTCATTTTTAGATTTGTCTTTTGGTTATTTAACATCTTTCCATGTTGACAAAATTCCATAGATTTTATTCTGGTTGTTTTCATTTTTAATTAATTTAACAATTATGCTACTTAACCTTGACAACCAAATGTTGTAAAGTTAGTCGGTTGTCTTGTCAGAACAGTTAAGGTGTGCGGAAGCTGGACCACACACTCAGAGTCACAGATACAAAAAAAATAATTTGAACAATTGTGGCCCATGCTGTACCTAAAATCTTGACGACATGGTTTTCATCTTAGGTTTTTACTTTTATATGAAGAAATTTCAATTCATTATTCACCCCACTTTCCTGGGATCTTCACCTACAAATTTAACTAGTTTTTTAAAGGGTTCACAGGACTTGGATGCTAATTGATTCTCGAGTGAAACATACTCGATATAAATATAATACTCGCATCAGGAGTCAGGACCTAACTATGTTGGGAACTGATGATAGAAATCTAGTATGGTTGCCCTCGTGATAATGTTTCATTCGTTAAGATATATGCTTAATGGAAACTCCATTTTTCTGAAACAAGAAACAAAGATATATGCTTAATGGAATCTTCATTGAATTATGAAGCCTACTTTGCTGAATAATCATGAAGCATTCATCTGCTGATTTGATATTGTCTCTAGATGGCTATCCGCTATCTATATCCTATTTATTGAATTTAAAATGAAATTTTAAACTATGTTATTTGCTCCTTTCCCATGGTTGGTTAATAGTAAGTAACTCGTCAAAATCATGTATGTTTCGTTTTCTAGATCCTGGTTTCACAATAAGCTGATTTCGTAGTCAGTTATTACCAGACTTGCATTTGGTTTAATTCATTAAAATCTTTTATATGGATGCGAAAGTGAGCCAATCTCAATGGTAATTGACATGTCTCATCGATCAAGTCTTAAACATCTTTTGATTACTTTTTTCTTTTTGGGGCCGACTAGTTCTGATCTTTTGTATAGAATTGCTTAGCATCTCATCAGTTGGTTGGATGCCATCATAAATTTTTATTATGTACTTAGAAAAATGTTTCACTCTCTGAACATTTATTTGGGATGGATTAACATGATATTGACAATCACGTTTTTCCTACTTGATCTTACGAAACTATCAGTTGTATTCATTTGTCAGTTTTTTTGCTATGCTAGCTTTCTAGGAATGAAAACAGTTGATGTCTATTACTCCATGATGATCCTTTCTCAACTCAATTAAAATACATCCATGGAGTGTCTGTTTGTCCTGTGTTTCATTTCTGCTGGTCTTTAAGATTAAACTCATATTGATTTAAATGTCATAAGCATTGATGTTCAATCTTCATTATTAACAGTATTGACCTTTTCTCTTTTGCTCGATGCTCAGTTCGCTGGTAATGTGAATCGAGTGTCTGCTGCTCTAGCTGTTTTCTTTTTTGCCCAGCTCATTTGATAACATGATCTCACAAAAGATACTAGATTTAGAGCATTCTTCTCTCCATTTCCTTCCCTTGGAATCTTCATTTATTTCTTGTAGCTGTTAATGAACTTTTCTTCTCCCAAATAACTGGCTCTGATCCTTTTTTTGTCCTTTGTCATCTGTGTAGAGCTTGAGGATTTTAACCCTTGATTGGTTTTATGTCTTTAGGTCATTGAATGATACTACATAATGAGAGTCGTCCACAAATCACCATGTCCATGCCTTGGCAATATCTGTATGTGATAAGAATTGAAGAATGAAATCAGATTCAATATGAGCAGGACTTTGAGTGAATTTGGAGTTCTATTAGATGTTGACCGGGGTATTTTTATGTCAATCATTTCACAAACAATGACATTGAAAATTACTTATTGAATATTTTGGAATAAACTTATTTTGAATTTCAGTCATGGAGTGAGGTCAACATGCAATTTTGCTATTTCGATTGTTCTTTGTCTCGCAGCTCTTGTATCTTCTTGGTTTCTTTTGCTTTCTTTTGGTTTTTTGTTCTCTTTTGTATCTTTTTGTTCTCTCCTCTTTTGAGGCTGGTAACTGAAGCTTTGCTTCTTTTCATTTTCTTAATGAAAATCTTGTTTCTTGTTTAAAAAAAAACATGCAATTTTTTTTGTACGAGCTTTGTTAAATTTTCTCTCAATTTCTAGACCCTAAACCCTA

mRNA sequence

GAGAAATAATAGGTGAATTTTGTCGCCAAGAAAAAAACGAAAGAATTTTGTAAAAAGAAAATAGAATCTGCCAATCTCTTCCTCCGGTCTACCTCGCTTCCTTCTCCGCATCAATCGCGTTCCAATTTCGTAATACCTTTCTCCATCTTTCCTTCTTCTTCTTCTTCTACCCTCACAGTTCGAGGAATTCAAATCTTTCGGTTTCAGTTTTCATCGGAATGTCTTCATCCGGCGGCAACTCCGGCGGTGGCGCCGCCTCCCACGGCCCTCTCCTCTACTTCTGTTACACCTGCAATCGTACGGTAACCATTACTCCCTCCTCCTCCTCCTCCGATCTTGTGTGCCCCAACTGCAACGACAGCTTCGTTGAAGAAATGGAAACTCCAAACCCTAACCCTAGCCCCCTTCCCAATCCTTTCAATCCATTCACTTCCGACGCCTTTCCGCCGTTCAGCGCCGTTGCCGGTGGAAGCGGCGGTTTCCCGATCACATTCTCCACGTCGTCGTCTTCCGGTGGCATTGGCGCTGGCGGTGGCGCTGGCGGCGGCGGTTCTATGATGATGAATGATCTATCGGCGCTGTTTGGAGGCGGTTCTCTTCGATCTTCGTCCTTGCAAGATTCTGACGCTTTTAATCCTTTACTCTTTCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTAGTAATCCAAAACGCCTCGGGAGAGGCGTTTCATCCATCTTCCAATTTCAACCTCGGCGACTACTTCTTCGGCCCCGGCCTTGAGCAGTTGATTCAACAATTGGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCTGCTTCGAAGTCCGCGATTGAGGCACTGCCTAATATCAAAATTACCGATGAATTGTTGGCATCGGATTCTTCCCAGTGTGCTGTGTGTAAGGACACTTTTGAACTCGATGAGGAGGCGAAATTGATGCCTTGTAAACACATATATCATGCTGATTGTATCGTTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTTTGTCGACATGAATTGCCTACCGATGATCCGGATTACGAGCAAAGGACGCGTGGGGCTTCGACTCCTAATCGAGGTCAAAGTGAGAGTCAACCCTTCAGCGTTTCTTCTACTGGTGGGGAAAATACTGGTGGGAATGCTCCTTCGAGCGAGAATTCACAGACACAACAAATGGCTGAAAGGAGGGTGAGAAGGATAGCTTTTCCTTGGCCATTTGGTGGTTTTGGTTCAGCTGCTGAAACTAGTAATAGCGGAGGGGGCAGCAATAATCGAAGTAGCAACGAACCTAGCTCGAGAAATAGGGGAAGTGAGAACTCTTCAGAGCCTATGGAGGAAGATCTTGATTGAGGATTACTGGTCATTGAATGATACTACATAATGAGAGTCGTCCACAAATCACCATGTCCATGCCTTGGCAATATCTGTATGTGATAAGAATTGAAGAATGAAATCAGATTCAATATGAGCAGGACTTTGAGTGAATTTGGAGTTCTATTAGATGTTGACCGGGGTATTTTTATGTCAATCATTTCACAAACAATGACATTGAAAATTACTTATTGAATATTTTGGAATAAACTTATTTTGAATTTCAGTCATGGAGTGAGGTCAACATGCAATTTTGCTATTTCGATTGTTCTTTGTCTCGCAGCTCTTGTATCTTCTTGGTTTCTTTTGCTTTCTTTTGGTTTTTTGTTCTCTTTTGTATCTTTTTGTTCTCTCCTCTTTTGAGGCTGGTAACTGAAGCTTTGCTTCTTTTCATTTTCTTAATGAAAATCTTGTTTCTTGTTTAAAAAAAAACATGCAATTTTTTTTGTACGAGCTTTGTTAAATTTTCTCTCAATTTCTAGACCCTAAACCCTA

Coding sequence (CDS)

ATGTCTTCATCCGGCGGCAACTCCGGCGGTGGCGCCGCCTCCCACGGCCCTCTCCTCTACTTCTGTTACACCTGCAATCGTACGGTAACCATTACTCCCTCCTCCTCCTCCTCCGATCTTGTGTGCCCCAACTGCAACGACAGCTTCGTTGAAGAAATGGAAACTCCAAACCCTAACCCTAGCCCCCTTCCCAATCCTTTCAATCCATTCACTTCCGACGCCTTTCCGCCGTTCAGCGCCGTTGCCGGTGGAAGCGGCGGTTTCCCGATCACATTCTCCACGTCGTCGTCTTCCGGTGGCATTGGCGCTGGCGGTGGCGCTGGCGGCGGCGGTTCTATGATGATGAATGATCTATCGGCGCTGTTTGGAGGCGGTTCTCTTCGATCTTCGTCCTTGCAAGATTCTGACGCTTTTAATCCTTTACTCTTTCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTAGTAATCCAAAACGCCTCGGGAGAGGCGTTTCATCCATCTTCCAATTTCAACCTCGGCGACTACTTCTTCGGCCCCGGCCTTGAGCAGTTGATTCAACAATTGGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCTGCTTCGAAGTCCGCGATTGAGGCACTGCCTAATATCAAAATTACCGATGAATTGTTGGCATCGGATTCTTCCCAGTGTGCTGTGTGTAAGGACACTTTTGAACTCGATGAGGAGGCGAAATTGATGCCTTGTAAACACATATATCATGCTGATTGTATCGTTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTTTGTCGACATGAATTGCCTACCGATGATCCGGATTACGAGCAAAGGACGCGTGGGGCTTCGACTCCTAATCGAGGTCAAAGTGAGAGTCAACCCTTCAGCGTTTCTTCTACTGGTGGGGAAAATACTGGTGGGAATGCTCCTTCGAGCGAGAATTCACAGACACAACAAATGGCTGAAAGGAGGGTGAGAAGGATAGCTTTTCCTTGGCCATTTGGTGGTTTTGGTTCAGCTGCTGAAACTAGTAATAGCGGAGGGGGCAGCAATAATCGAAGTAGCAACGAACCTAGCTCGAGAAATAGGGGAAGTGAGAACTCTTCAGAGCCTATGGAGGAAGATCTTGATTGA

Protein sequence

MSSSGGNSGGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMNDLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFELDEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQPFSVSSTGGENTGGNAPSSENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNNRSSNEPSSRNRGSENSSEPMEEDLD

Homology

[Close]

BLAST of Sed0022760 vs. NCBI nr
Match: XP_023542390.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo] >XP_023542391.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo] >XP_023542392.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 616.3 bits (1588), Expect = 1.8e-172
Identity = 328/385 (85.19%), Postives = 344/385 (89.35%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGAAS G  LYFCYTCNRTVTI   SSSSDL+CP+CNDSFVEEMETP
Sbjct: 1   MSSSGGNSGDGAGGGAASQGHQLYFCYTCNRTVTIA-HSSSSDLLCPSCNDSFVEEMETP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FSTSSSSGGIGAGG        MMN
Sbjct: 61  NPNPSPVPNPFVSFTSEAFPPFSTGGGGNGGFPIIFSTSSSSGGIGAGGS-------MMN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGS RSSSLQD D FNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY
Sbjct: 121 DLSALLGGGSFRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKIT+ELLASDSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           +EEAK MPCKHIYHADCIVPWLELHNSCPVCR+ELPTDDPDYEQRTRG S PNR QSESQ
Sbjct: 241 NEEAKQMPCKHIYHADCIVPWLELHNSCPVCRYELPTDDPDYEQRTRGTSAPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
            F  SSTGGEN GGN P+S ENSQTQQMA+RRVRRIAFPWPF GFG AAETS+SGGG+N+
Sbjct: 301 LFGDSSTGGENFGGNDPNSGENSQTQQMADRRVRRIAFPWPFRGFGPAAETSDSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +S+EPSSRNRGS+NSSEPMEEDLD
Sbjct: 361 GNSDEPSSRNRGSQNSSEPMEEDLD 377

[Close]

BLAST of Sed0022760 vs. NCBI nr
Match: KAG6572988.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 615.1 bits (1585), Expect = 3.9e-172
Identity = 327/385 (84.94%), Postives = 343/385 (89.09%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGAAS G  LYFCYTCNRTVTI   SSSSDL+CPNCNDSFVEEMETP
Sbjct: 1   MSSSGGNSGDGAGGGAASQGHQLYFCYTCNRTVTIA-HSSSSDLLCPNCNDSFVEEMETP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FSTSSSSGGIGAGG        MMN
Sbjct: 61  NPNPSPVPNPFVSFTSEAFPPFSTGGGGNGGFPIIFSTSSSSGGIGAGGS-------MMN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGS RSSSLQD D FNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY
Sbjct: 121 DLSALLGGGSFRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKIT+ELLASDSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           +EEAK MPCKHIYH DCIVPWLELHNSCPVCR+ELPTDDPDYEQRTRG S PNR QSESQ
Sbjct: 241 NEEAKQMPCKHIYHEDCIVPWLELHNSCPVCRYELPTDDPDYEQRTRGTSAPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
            F  SSTGGEN GG+ P+S ENSQTQQMA+RRVRRIAFPWPF GFG AAETS+SGGG+N+
Sbjct: 301 LFGDSSTGGENFGGSDPNSGENSQTQQMADRRVRRIAFPWPFRGFGPAAETSDSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +SN+PSSRNRGS+NSSEPMEEDLD
Sbjct: 361 GNSNDPSSRNRGSQNSSEPMEEDLD 377

[Close]

BLAST of Sed0022760 vs. NCBI nr
Match: XP_022954506.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata] >XP_022954507.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata] >XP_022954509.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata] >XP_022954510.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 613.6 bits (1581), Expect = 1.1e-171
Identity = 326/385 (84.68%), Postives = 344/385 (89.35%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGAAS G  LYFCYTCNRTVTI   SSSSDL+CPNCNDSFVEEMETP
Sbjct: 1   MSSSGGNSGDGAGGGAASQGHQLYFCYTCNRTVTIA-HSSSSDLLCPNCNDSFVEEMETP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FSTSSSSGGIGAGG        MMN
Sbjct: 61  NPNPSPVPNPFVSFTSEAFPPFSTGGGGNGGFPIIFSTSSSSGGIGAGGS-------MMN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGS RSSSLQD D FNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY
Sbjct: 121 DLSALLGGGSFRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKIT+ELLASDSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           +EEAK MPCKHIYH DCIVPWLELHNSCPVCR+ELPTDDPDYEQRTRG S+PNR QSESQ
Sbjct: 241 NEEAKQMPCKHIYHEDCIVPWLELHNSCPVCRYELPTDDPDYEQRTRGTSSPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
            F  SSTGGEN GG+ P+S ENSQTQQMA+RRVRRIAFPWPF GFG AAETS+SGGG+N+
Sbjct: 301 LFGDSSTGGENFGGSDPNSGENSQTQQMADRRVRRIAFPWPFRGFGPAAETSDSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +S++PSSRNRGS+NSSEPMEEDLD
Sbjct: 361 GNSDDPSSRNRGSQNSSEPMEEDLD 377

[Close]

BLAST of Sed0022760 vs. NCBI nr
Match: XP_022994940.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima] >XP_022994941.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima] >XP_022994942.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima] >XP_022994943.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 613.6 bits (1581), Expect = 1.1e-171
Identity = 325/385 (84.42%), Postives = 343/385 (89.09%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGAAS G  LYFCYTCNRTVTI   SSSSDL+CPNCNDSFVEEMETP
Sbjct: 1   MSSSGGNSGDGAGGGAASQGHQLYFCYTCNRTVTIA-HSSSSDLLCPNCNDSFVEEMETP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FSTSSSSGGIG GG        M+N
Sbjct: 61  NPNPSPVPNPFVSFTSEAFPPFSTGGGGNGGFPIIFSTSSSSGGIGGGGS-------MVN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGS RSSSLQD D FNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY
Sbjct: 121 DLSALLGGGSFRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKIT+ELLASDSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           +EEAK MPCKHIYHADCI+PWLELHNSCPVCR+ELPTDDPDYEQRTRG S PNR QSESQ
Sbjct: 241 NEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGTSAPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
            F  SSTGGEN GGN P+S ENSQTQQMA+RRVRRIAFPWPF GFG AAETS+SGGG+N+
Sbjct: 301 LFGDSSTGGENFGGNDPNSGENSQTQQMADRRVRRIAFPWPFRGFGPAAETSDSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +S++PSSRNRGS+NSSEPMEEDLD
Sbjct: 361 GNSDDPSSRNRGSQNSSEPMEEDLD 377

[Close]

BLAST of Sed0022760 vs. NCBI nr
Match: KAG7012172.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 613.2 bits (1580), Expect = 1.5e-171
Identity = 326/385 (84.68%), Postives = 343/385 (89.09%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGAAS G  LYFCYTCNRTVTI   SSSSDL+CPNCNDSFVEEMETP
Sbjct: 1   MSSSGGNSGDGAGGGAASQGHQLYFCYTCNRTVTIA-HSSSSDLLCPNCNDSFVEEMETP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FSTSSSSGGIGAGG        MMN
Sbjct: 61  NPNPSPVPNPFVSFTSEAFPPFSTGGGGNGGFPIIFSTSSSSGGIGAGGS-------MMN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGS RSSSLQD D FNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY
Sbjct: 121 DLSALLGGGSFRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKIT+ELLASDSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           +EEAK MPCKHIYH DCIVPWLELHNSCPVCR+ELPTDDPDYEQRTRG S PNR QSESQ
Sbjct: 241 NEEAKQMPCKHIYHEDCIVPWLELHNSCPVCRYELPTDDPDYEQRTRGTSAPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
            F  SSTGGEN GG+ P+S ENSQTQQMA+RRVRRIAFPWPF GFG AAETS+SGGG+N+
Sbjct: 301 LFGDSSTGGENFGGSDPNSGENSQTQQMADRRVRRIAFPWPFRGFGPAAETSDSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +S++PSSRNRGS+NSSEPMEEDLD
Sbjct: 361 GNSDDPSSRNRGSQNSSEPMEEDLD 377

[Close]

BLAST of Sed0022760 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.4e-70
Identity = 169/357 (47.34%), Postives = 204/357 (57.14%), Query Frame = 0


Query: 1   MSSSGGNSGGGAASHGPLL---YFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPN 60
           MSS G  +GGG A+   +    +FCY CNRTV +T S  SSD  CP CN+ F+EE + PN
Sbjct: 1   MSSDGNVTGGGGANTVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPN 60

Query: 61  P-------NPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGG 120
           P       NP+P   PF+        PF+++       P+ F +SSS+            
Sbjct: 61  PNQGSGFLNPNPNSIPFHDLFLTLSDPFASL------LPLLFPSSSST-------TTSSS 120

Query: 121 GSMMMNDLSALFGGGSLRSSSLQDSDAFNPLLFLQNYL-----QSANVQLVIQ-NASGEA 180
            S+  N+ S     G  RS    D  AF+P  F+QN+L       A ++ VIQ N S + 
Sbjct: 121 ASIDPNNPSL---SGPTRSGR-GDPFAFDPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQG 180

Query: 181 FHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDS 240
           F   +  N+GDYF GPGLEQLIQQLAENDPNRYGTPPASKSAIEALP + IT   L S+ 
Sbjct: 181 FRLPA--NIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEF 240

Query: 241 SQCAVCKDTFELDEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRG 300
           +QCAVC D FE   EAK MPCKH+YH DC++PWLELHNSCPVCRHELPTDDPDYE+R RG
Sbjct: 241 NQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRG 300

Query: 301 ASTPNRGQSESQPFSVSSTGGENTGGNAPSSENSQTQQMAERRVRRIAFPWPFGGFG 342
           A                 T G N G N  S + S        R  RI+ PWPF   G
Sbjct: 301 A---------------QGTSGGNDGDN--SGQRSDGDNRTVERSFRISLPWPFQARG 321

[Close]

BLAST of Sed0022760 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.5e-68
Identity = 172/374 (45.99%), Postives = 215/374 (57.49%), Query Frame = 0


Query: 3   SSGGNSGGGAASHGPL--LYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNP 62
           SSG NS G AA+   +  ++FCY CN+TVTI+  SSS+D  CP CN  F+EE E PNPN 
Sbjct: 2   SSGVNSTGSAAAAPEVDKMFFCYQCNQTVTIS-ISSSADPFCPICNQGFLEEYEDPNPNQ 61

Query: 63  SPLPNPFNPFTSDAF----PPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 122
           S     FNP +SD+F     PFS +       P+ F +S++     A  G          
Sbjct: 62  S---LNFNPNSSDSFFPMADPFSTL------LPLIFGSSAA-----APSGM--------- 121

Query: 123 DLSALFGGG---SLRSSSLQ-DSDAFNPLLFLQNYLQS-----ANVQLVIQNASGEAFHP 182
           D  +LFG       RS+     SDAF+P  FLQN+LQ+      + + VI+N      HP
Sbjct: 122 DFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIEN------HP 181

Query: 183 SS-----NFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLAS 242
           S        N GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI+ALP +K+T ++L S
Sbjct: 182 SDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKS 241

Query: 243 DSSQCAVCKDTFELDEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRT 302
           + +QCAVC D FE   + K MPCKH++H DC++PWLELHNSCPVCR ELPTDDPDYE R+
Sbjct: 242 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRS 301

Query: 303 RGASTPNRGQSESQPFSVSSTGGENTGGNAPSSENSQTQQMAERRVRRIAFPWPF---GG 354
           +G+     GQ                     S E  QT + +      I  PWPF    G
Sbjct: 302 QGSQGSGDGQG--------------------SVEGQQTPRFS------IQLPWPFRRQDG 319

[Close]

BLAST of Sed0022760 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-33
Identity = 118/351 (33.62%), Postives = 160/351 (45.58%), Query Frame = 0


Query: 20  YFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNPSPLPNPFNPFTSDAFPPFS 79
           ++C+ C R V +       + VC  C   FVEE++    +P            D F    
Sbjct: 8   HWCHRCQRAVRL----HGQEPVCFYCGGGFVEELDMAQASP-----------FDMFRSHR 67

Query: 80  AVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMNDLSALFGGGSLR----SSSLQDS 139
            V      F +  + S                  M N L+       +R    SS  ++ 
Sbjct: 68  GVVERDQTFDLMDAFS----------------VFMRNRLAERSHDREIRGRTISSGPENF 127

Query: 140 DAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSS------NFNLGDYFFGPGLEQLIQQL 199
               PLL     +     +L   NA    F+  S        N GDYFFGPGLE+L +QL
Sbjct: 128 PGLAPLLIFGGQVP---YRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQL 187

Query: 200 AENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFELDEEAKLMPCKHIY 259
           +     R G PPA +SAI+ALP IKI    L S  S C VCKD FEL  EAK MPC HIY
Sbjct: 188 SAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIY 247

Query: 260 HADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQPFSVSSTGGENTG 319
           H+DCIVPWL  HNSCPVCR ELP+           AS P+  Q+ + P         N  
Sbjct: 248 HSDCIVPWLVQHNSCPVCRQELPS-----------ASGPSSSQNRTTP-------TRNYR 304

Query: 320 GNAPSSENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNNRSSNE 361
            ++ SS ++  +   ERR    +F WPF   GS++ ++ + GG+ N  +++
Sbjct: 308 SSSSSSSSNSRENGNERRNPFSSF-WPFRSSGSSSSSTQNRGGTRNSDTSD 304

[Close]

BLAST of Sed0022760 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-29
Identity = 121/358 (33.80%), Postives = 166/358 (46.37%), Query Frame = 0


Query: 20  YFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNPSPLPNPFNPFTSDAFPPFS 79
           ++C+ C R V +     + D VC  C   FVEE++   P+ +      +P T D    FS
Sbjct: 8   HWCHRCQRAVWL----RARDAVCSYCGGGFVEEIDI-GPSRAHRDVERDP-TFDLMEAFS 67

Query: 80  AVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMNDLSALFGGGSLRSSSLQDSDAFN 139
           A         +    +  S      G  G  GS   ++L+ L   G      L   D   
Sbjct: 68  AF--------MRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGD--- 127

Query: 140 PLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGT 199
                     +++V+  + N +      +   N GDYFFGPGLE+LI+QL+    +R G 
Sbjct: 128 ----------NSSVEAFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GP 187

Query: 200 PPASKSAIEALPNIKITDELLASDSSQCAVCKDTFELDEEAKLMPCKHIYHADCIVPWLE 259
           PPA KS+I+ALP IKIT + L S  S C VCKD FEL  EAK MPC HIYH+DCIVPWL 
Sbjct: 188 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLV 247

Query: 260 LHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQPFSVSSTGGENTGGNAPSSENSQ 319
            HNSCPVCR ELP         +RG+S+           S  S+   +T G     ENS 
Sbjct: 248 QHNSCPVCRKELP---------SRGSSS-----------STQSSQNRSTNGR----ENS- 298

Query: 320 TQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNNRSSNEPSSRNRGSENSSEPMEE 378
                 RR    +  WPF        +S+S    N R +N  ++   G  +  +  ++
Sbjct: 308 ------RRRNIFSNLWPF-------RSSSSSSTQNRRDTNNTATAEEGHYHHHQQQQQ 298

[Close]

BLAST of Sed0022760 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.8e-24
Identity = 108/364 (29.67%), Postives = 163/364 (44.78%), Query Frame = 0


Query: 20  YFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEM------ETPNPNPSPLPNPFNPF--- 79
           Y+C+ C + +     +   ++ CP+C   FVEEM         N  P P  + +NP    
Sbjct: 9   YWCHECEQAI---EEAMVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEPGFSQWNPIEHP 68

Query: 80  --TSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMNDLSALFGGGSLR 139
             T D+    + +     GF      +S+                +++ +         R
Sbjct: 69  GETMDSDDEDNDLGREFEGFIRRHRRASTL-------------RRVLDSIHDDLADDQER 128

Query: 140 SSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQ 199
            SS+   +AFN  L LQ  +   +     +    +    + +  L +Y  G GL  L+Q 
Sbjct: 129 DSSIL-INAFNQALALQGSVLDPD-----EGQGDQGGSTNDDGLLEEYVLGAGLSLLLQH 188

Query: 200 LAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFELDEEAKLMPCKHI 259
           LAE+DP+R GTPPA K A+EALP +KI + +       C+VC D  E+  +AK MPC+H 
Sbjct: 189 LAESDPSRNGTPPAKKEAVEALPTVKIEEVV------SCSVCLDDLEVGSQAKQMPCEHK 248

Query: 260 YHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTP-NRGQSESQPFSVSSTGGEN 319
           +H+ CI+PWLELH+SCPVCR ELP+++      T+  + P N G+ E     V + G   
Sbjct: 249 FHSSCILPWLELHSSCPVCRFELPSEE------TKDLNEPSNIGRVEDSHEEVRADG--- 308

Query: 320 TGGNAPSSENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNNRSSNEPSSRNRG 372
             GN   S N                PW      S  E  N+GG S ++ S   S  N  
Sbjct: 309 -PGNVSESSNRPW----------AIVPW-LNELFSTREAQNAGGVSTDQQSPHTSGTNPN 323

[Close]

BLAST of Sed0022760 vs. ExPASy TrEMBL
Match: A0A6J1K0N0 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111490530 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 5.5e-172
Identity = 325/385 (84.42%), Postives = 343/385 (89.09%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGAAS G  LYFCYTCNRTVTI   SSSSDL+CPNCNDSFVEEMETP
Sbjct: 1   MSSSGGNSGDGAGGGAASQGHQLYFCYTCNRTVTIA-HSSSSDLLCPNCNDSFVEEMETP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FSTSSSSGGIG GG        M+N
Sbjct: 61  NPNPSPVPNPFVSFTSEAFPPFSTGGGGNGGFPIIFSTSSSSGGIGGGGS-------MVN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGS RSSSLQD D FNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY
Sbjct: 121 DLSALLGGGSFRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKIT+ELLASDSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           +EEAK MPCKHIYHADCI+PWLELHNSCPVCR+ELPTDDPDYEQRTRG S PNR QSESQ
Sbjct: 241 NEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGTSAPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
            F  SSTGGEN GGN P+S ENSQTQQMA+RRVRRIAFPWPF GFG AAETS+SGGG+N+
Sbjct: 301 LFGDSSTGGENFGGNDPNSGENSQTQQMADRRVRRIAFPWPFRGFGPAAETSDSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +S++PSSRNRGS+NSSEPMEEDLD
Sbjct: 361 GNSDDPSSRNRGSQNSSEPMEEDLD 377

[Close]

BLAST of Sed0022760 vs. ExPASy TrEMBL
Match: A0A6J1GR60 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111456754 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 5.5e-172
Identity = 326/385 (84.68%), Postives = 344/385 (89.35%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGAAS G  LYFCYTCNRTVTI   SSSSDL+CPNCNDSFVEEMETP
Sbjct: 1   MSSSGGNSGDGAGGGAASQGHQLYFCYTCNRTVTIA-HSSSSDLLCPNCNDSFVEEMETP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FSTSSSSGGIGAGG        MMN
Sbjct: 61  NPNPSPVPNPFVSFTSEAFPPFSTGGGGNGGFPIIFSTSSSSGGIGAGGS-------MMN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGS RSSSLQD D FNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY
Sbjct: 121 DLSALLGGGSFRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKIT+ELLASDSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           +EEAK MPCKHIYH DCIVPWLELHNSCPVCR+ELPTDDPDYEQRTRG S+PNR QSESQ
Sbjct: 241 NEEAKQMPCKHIYHEDCIVPWLELHNSCPVCRYELPTDDPDYEQRTRGTSSPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
            F  SSTGGEN GG+ P+S ENSQTQQMA+RRVRRIAFPWPF GFG AAETS+SGGG+N+
Sbjct: 301 LFGDSSTGGENFGGSDPNSGENSQTQQMADRRVRRIAFPWPFRGFGPAAETSDSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +S++PSSRNRGS+NSSEPMEEDLD
Sbjct: 361 GNSDDPSSRNRGSQNSSEPMEEDLD 377

[Close]

BLAST of Sed0022760 vs. ExPASy TrEMBL
Match: A0A1S3CT44 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103504650 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 8.0e-171
Identity = 320/385 (83.12%), Postives = 344/385 (89.35%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGA S+ P LYFCYTCNRTVTITP SSSSDL+CPNCNDSFVEEME+P
Sbjct: 1   MSSSGGNSGDGAGGGAVSYPPQLYFCYTCNRTVTITP-SSSSDLLCPNCNDSFVEEMESP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FST+SSSGGIG GG        MMN
Sbjct: 61  NPNPSPVPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGS-------MMN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGSLRSSSLQ+ D FNPLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDY
Sbjct: 121 DLSALLGGGSLRSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIE LP+IKIT+ELLA+DSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           DE AKLMPCKHIYHADCI+PWLELHNSCPVCR+ELPTDDPDYEQRTR +S PNR QSESQ
Sbjct: 241 DEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRASSAPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
           PF  SSTGGEN  G+ P+S ENSQTQQM ERRVRRIAFPWPF GFGSAAETSNSGGG+N+
Sbjct: 301 PFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +++EPSSRNRGS++SSEPM+EDLD
Sbjct: 361 GNNDEPSSRNRGSQSSSEPMQEDLD 377

[Close]

BLAST of Sed0022760 vs. ExPASy TrEMBL
Match: A0A5D3BIF1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002670 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 8.0e-171
Identity = 320/385 (83.12%), Postives = 344/385 (89.35%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGGA S+ P LYFCYTCNRTVTITP SSSSDL+CPNCNDSFVEEME+P
Sbjct: 1   MSSSGGNSGDGAGGGAVSYPPQLYFCYTCNRTVTITP-SSSSDLLCPNCNDSFVEEMESP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+PNPF  FTS+AFPPFS   GG+GGFPI FST+SSSGGIG GG        MMN
Sbjct: 61  NPNPSPVPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGS-------MMN 120

Query: 121 DLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDY 180
           DLSAL GGGSLRSSSLQ+ D FNPLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDY
Sbjct: 121 DLSALLGGGSLRSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAIE LP+IKIT+ELLA+DSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFEL 240

Query: 241 DEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQ 300
           DE AKLMPCKHIYHADCI+PWLELHNSCPVCR+ELPTDDPDYEQRTR +S PNR QSESQ
Sbjct: 241 DEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRASSAPNRSQSESQ 300

Query: 301 PFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNN 360
           PF  SSTGGEN  G+ P+S ENSQTQQM ERRVRRIAFPWPF GFGSAAETSNSGGG+N+
Sbjct: 301 PFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNS 360

Query: 361 RSSNEPSSRNRGSENSSEPMEEDLD 381
            +++EPSSRNRGS++SSEPM+EDLD
Sbjct: 361 GNNDEPSSRNRGSQSSSEPMQEDLD 377

[Close]

BLAST of Sed0022760 vs. ExPASy TrEMBL
Match: A0A0A0LTV3 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G043100 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 8.8e-170
Identity = 321/386 (83.16%), Postives = 343/386 (88.86%), Query Frame = 0


Query: 1   MSSSGGNS----GGGAASHGPLLYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETP 60
           MSSSGGNS    GGG ASH P LYFCYTCNRTVTITP SSSSDL+CPNCNDSFVEEME+P
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITP-SSSSDLLCPNCNDSFVEEMESP 60

Query: 61  NPNPSPLPNPFNPFTSDAFPPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 120
           NPNPSP+ NPF  FTS+AFPPFS   GG+GGFPI FST+SSSGGIG GG        MMN
Sbjct: 61  NPNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGS-------MMN 120

Query: 121 DLSALFGGGSLR-SSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGD 180
           DLSAL GGGSLR SSSLQ+ D FNPLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGD
Sbjct: 121 DLSALLGGGSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGD 180

Query: 181 YFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFE 240
           YFFGPGLEQLIQQLAENDPNRYGTPPASKSAIE LP+IKIT+ELLA+DSSQCAVCKDTFE
Sbjct: 181 YFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFE 240

Query: 241 LDEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSES 300
           LDE AKLMPCKHIYHADCI+PWLELHNSCPVCR+ELPTDDPDYEQRTRG+S PNR QSES
Sbjct: 241 LDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSES 300

Query: 301 QPFSVSSTGGENTGGNAPSS-ENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSN 360
           QPF  SSTGGEN  G+ P+S ENSQTQQM ERRVRRIAFPWPF GFGSAAETSNSGGG+N
Sbjct: 301 QPFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNN 360

Query: 361 NRSSNEPSSRNRGSENSSEPMEEDLD 381
           + +++EPSSRNRGS+ SSEPM+EDLD
Sbjct: 361 SGNNDEPSSRNRGSQGSSEPMQEDLD 378

[Close]

BLAST of Sed0022760 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.7e-69
Identity = 172/374 (45.99%), Postives = 215/374 (57.49%), Query Frame = 0


Query: 3   SSGGNSGGGAASHGPL--LYFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNP 62
           SSG NS G AA+   +  ++FCY CN+TVTI+  SSS+D  CP CN  F+EE E PNPN 
Sbjct: 2   SSGVNSTGSAAAAPEVDKMFFCYQCNQTVTIS-ISSSADPFCPICNQGFLEEYEDPNPNQ 61

Query: 63  SPLPNPFNPFTSDAF----PPFSAVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMN 122
           S     FNP +SD+F     PFS +       P+ F +S++     A  G          
Sbjct: 62  S---LNFNPNSSDSFFPMADPFSTL------LPLIFGSSAA-----APSGM--------- 121

Query: 123 DLSALFGGG---SLRSSSLQ-DSDAFNPLLFLQNYLQS-----ANVQLVIQNASGEAFHP 182
           D  +LFG       RS+     SDAF+P  FLQN+LQ+      + + VI+N      HP
Sbjct: 122 DFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIEN------HP 181

Query: 183 SS-----NFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLAS 242
           S        N GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI+ALP +K+T ++L S
Sbjct: 182 SDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKS 241

Query: 243 DSSQCAVCKDTFELDEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRT 302
           + +QCAVC D FE   + K MPCKH++H DC++PWLELHNSCPVCR ELPTDDPDYE R+
Sbjct: 242 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRS 301

Query: 303 RGASTPNRGQSESQPFSVSSTGGENTGGNAPSSENSQTQQMAERRVRRIAFPWPF---GG 354
           +G+     GQ                     S E  QT + +      I  PWPF    G
Sbjct: 302 QGSQGSGDGQG--------------------SVEGQQTPRFS------IQLPWPFRRQDG 319

[Close]

BLAST of Sed0022760 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-40
Identity = 95/217 (43.78%), Postives = 126/217 (58.06%), Query Frame = 0


Query: 152 NVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALP 211
           N  LV+ +   +  HPS   +LGDYF GPGL+ L+Q LAENDPNR GTPPA K A+EALP
Sbjct: 192 NQSLVVPSDQNQN-HPSLT-SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALP 251

Query: 212 NIKITDELLASDSSQCAVCKDTFELDEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHEL 271
            +KI + L      QC+VC D FE   EAK MPCKH +H  CIVPWLELH+SCPVCR EL
Sbjct: 252 TVKIMEPL------QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 311

Query: 272 PTDDPDYEQRTRGASTPNRGQSESQPFSVSSTGGENTGGNAPSSENSQTQQMAERRVRRI 331
           P+   D ++      T    +   +  +V  T   N   N  +++  +  ++     RR 
Sbjct: 312 PSSADDDDE------TKTDSERVLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRF 371

Query: 332 AFPWPFGGFGSAAETSNSGGGSNNRSSNEPSSRNRGS 369
           +FPWPF G  S++ +S+S    +    N   SR+ GS
Sbjct: 372 SFPWPFSGLFSSSSSSSSSTSGSQSGENNFFSRSSGS 394

[Close]

BLAST of Sed0022760 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.2e-39
Identity = 117/360 (32.50%), Postives = 173/360 (48.06%), Query Frame = 0


Query: 20  YFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNPSPLPNPFNPFTSDAFPPFS 79
           Y+C+ C++TV        +++ CP C   FVEEME  + + S  P       S   P   
Sbjct: 9   YWCHMCSQTVN---PVMEAEIKCPFCQSGFVEEMEDDDDHDSSDPADVRANNSLWAPILM 68

Query: 80  AVAGGSGGFPI-------TFSTSSSSGGIGAGGGAGGG------------------GSMM 139
            +       P+         S   +   +        G                   + +
Sbjct: 69  ELMND----PVRRRRNQSVESVEDNQNEVQTENNEDDGENDLDWQLQEILRRRRRHSAAV 128

Query: 140 MNDLSALFGGGSLRSSSLQDSDAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLG 199
           +  L  +  G S+ S S  +       + L N   ++N  + +QN++     P+   +LG
Sbjct: 129 LQLLQGIRAGLSVESESTGNGGNNPGRVILIN---TSNQTITVQNSADMDSVPAG--SLG 188

Query: 200 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTF 259
           DYF GPG E L+Q+LAENDPNRYGTPPA K A+EAL  +KI + L      QC+VC D F
Sbjct: 189 DYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCLDDF 248

Query: 260 ELDEEAKLMPCKHIYHADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSE 319
           E+  EAKLMPC H +H+DC++PWLELH+SCPVCR++LP D    E +T   +T +     
Sbjct: 249 EIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPAD----EAKTDSVTTTSDNNGS 308

Query: 320 SQPFSVSSTGGENTGGNAPSSENSQTQQMAERRVRR-----IAFPWPFGGFGSAAETSNS 350
           S   + +S G EN+ GN    E  + ++  E           + PWPF    S+++ SN+
Sbjct: 309 SSASATTSHGAENSDGNRRQEEEEEEEEEEEEENENNDGSGFSIPWPFSTLFSSSQDSNA 346

[Close]

BLAST of Sed0022760 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-34
Identity = 118/351 (33.62%), Postives = 160/351 (45.58%), Query Frame = 0


Query: 20  YFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNPSPLPNPFNPFTSDAFPPFS 79
           ++C+ C R V +       + VC  C   FVEE++    +P            D F    
Sbjct: 8   HWCHRCQRAVRL----HGQEPVCFYCGGGFVEELDMAQASP-----------FDMFRSHR 67

Query: 80  AVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMNDLSALFGGGSLR----SSSLQDS 139
            V      F +  + S                  M N L+       +R    SS  ++ 
Sbjct: 68  GVVERDQTFDLMDAFS----------------VFMRNRLAERSHDREIRGRTISSGPENF 127

Query: 140 DAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSS------NFNLGDYFFGPGLEQLIQQL 199
               PLL     +     +L   NA    F+  S        N GDYFFGPGLE+L +QL
Sbjct: 128 PGLAPLLIFGGQVP---YRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQL 187

Query: 200 AENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFELDEEAKLMPCKHIY 259
           +     R G PPA +SAI+ALP IKI    L S  S C VCKD FEL  EAK MPC HIY
Sbjct: 188 SAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIY 247

Query: 260 HADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQPFSVSSTGGENTG 319
           H+DCIVPWL  HNSCPVCR ELP+           AS P+  Q+ + P         N  
Sbjct: 248 HSDCIVPWLVQHNSCPVCRQELPS-----------ASGPSSSQNRTTP-------TRNYR 304

Query: 320 GNAPSSENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNNRSSNE 361
            ++ SS ++  +   ERR    +F WPF   GS++ ++ + GG+ N  +++
Sbjct: 308 SSSSSSSSNSRENGNERRNPFSSF-WPFRSSGSSSSSTQNRGGTRNSDTSD 304

[Close]

BLAST of Sed0022760 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-34
Identity = 118/351 (33.62%), Postives = 160/351 (45.58%), Query Frame = 0


Query: 20  YFCYTCNRTVTITPSSSSSDLVCPNCNDSFVEEMETPNPNPSPLPNPFNPFTSDAFPPFS 79
           ++C+ C R V +       + VC  C   FVEE++    +P            D F    
Sbjct: 8   HWCHRCQRAVRL----HGQEPVCFYCGGGFVEELDMAQASP-----------FDMFRSHR 67

Query: 80  AVAGGSGGFPITFSTSSSSGGIGAGGGAGGGGSMMMNDLSALFGGGSLR----SSSLQDS 139
            V      F +  + S                  M N L+       +R    SS  ++ 
Sbjct: 68  GVVERDQTFDLMDAFS----------------VFMRNRLAERSHDREIRGRTISSGPENF 127

Query: 140 DAFNPLLFLQNYLQSANVQLVIQNASGEAFHPSS------NFNLGDYFFGPGLEQLIQQL 199
               PLL     +     +L   NA    F+  S        N GDYFFGPGLE+L +QL
Sbjct: 128 PGLAPLLIFGGQVP---YRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQL 187

Query: 200 AENDPNRYGTPPASKSAIEALPNIKITDELLASDSSQCAVCKDTFELDEEAKLMPCKHIY 259
           +     R G PPA +SAI+ALP IKI    L S  S C VCKD FEL  EAK MPC HIY
Sbjct: 188 SAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIY 247

Query: 260 HADCIVPWLELHNSCPVCRHELPTDDPDYEQRTRGASTPNRGQSESQPFSVSSTGGENTG 319
           H+DCIVPWL  HNSCPVCR ELP+           AS P+  Q+ + P         N  
Sbjct: 248 HSDCIVPWLVQHNSCPVCRQELPS-----------ASGPSSSQNRTTP-------TRNYR 304

Query: 320 GNAPSSENSQTQQMAERRVRRIAFPWPFGGFGSAAETSNSGGGSNNRSSNE 361
            ++ SS ++  +   ERR    +F WPF   GS++ ++ + GG+ N  +++
Sbjct: 308 SSSSSSSSNSRENGNERRNPFSSF-WPFRSSGSSSSSTQNRGGTRNSDTSD 304

The following BLAST results are available for this feature:

BLAST of Sed0022760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542390.1	1.8e-172	85.19	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo] >XP_02354239...	[more]
KAG6572988.1	3.9e-172	84.94	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954506.1	1.1e-171	84.68	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata] >XP_022954507.1 E3 u...	[more]
XP_022994940.1	1.1e-171	84.42	E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima] >XP_022994941.1 E3 ubi...	[more]
KAG7012172.1	1.5e-171	84.68	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Sed0022760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	3.4e-70	47.34	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	2.5e-68	45.99	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
O22197	2.6e-33	33.62	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	1.3e-29	33.80	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
Q6AVN2	2.8e-24	29.67	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]

BLAST of Sed0022760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K0N0	5.5e-172	84.42	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111490530 P...	[more]
A0A6J1GR60	5.5e-172	84.68	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111456754...	[more]
A0A1S3CT44	8.0e-171	83.12	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103504650 PE=4 ...	[more]
A0A5D3BIF1	8.0e-171	83.12	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LTV3	8.8e-170	83.16	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G043100 PE...	[more]

BLAST of Sed0022760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	1.7e-69	45.99	RING/U-box superfamily protein	[more]
AT5G56340.1	2.9e-40	43.78	RING/U-box superfamily protein	[more]
AT1G55530.1	3.2e-39	32.50	RING/U-box superfamily protein	[more]
AT2G40830.2	1.8e-34	33.62	RING-H2 finger C1A	[more]
AT2G40830.1	1.8e-34	33.62	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 379..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..325
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 13..347
None	No IPR available	PANTHER	PTHR15710:SF75	E3 UBIQUITIN-PROTEIN LIGASE RING1	coord: 13..347
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 226..268 e-value: 4.51193E-27 score: 99.6996
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 206..275
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 227..267 e-value: 5.2E-7 score: 39.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 226..268 e-value: 4.8E-11 score: 42.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 227..268 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 189..274 e-value: 3.7E-22 score: 79.8
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 19..53 e-value: 7.8E-13 score: 48.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022760.2	Sed0022760.2	mRNA
Sed0022760.3	Sed0022760.3	mRNA
Sed0022760.1	Sed0022760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity