Sed0022752 (gene) Chayote v1

Overview
NameSed0022752
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRibosomal protein L37
LocationLG06: 45349496 .. 45351567 (+)
RNA-Seq ExpressionSed0022752
SyntenySed0022752
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTAAACCCTCGCAATATTAAGTCTGCCGCTCACATTTGAGCCCTCTTTGAATTCCATTGTTTCATCGTCAAATTCGATCAAATGGTATTGGCCGAACTTGATTTTATTCCGTTAATCTCTTCTCTCTATACATGAATTTTACAGAATTCGAAATTCAAGTTTGTTGATCGGTGCATTTCAGGGAAAGGGAACGGGAAGTTTTGGTAAGAGGAGGAACAAGACCCACACTCTGTGTGTTAGGTGTGGCCGCCGGAGTTTCCACCTGCAGAAGAGTCGGTGCTCCGCTTGCGCATTTCCGGCCGCCCGTAAGCGAACATGTAAGATCGTTTTTGCACAATTGAATCTGTTTTATTCACTGGGCTTCATTTGTTTTTATGGATTAGAAGTAATTATCATTCAATCCTCCATTATCGACCTGGATATTGGAGCAGATTTGTTTTGCGTATACCAATTTCTTCGAGTGAAAGTTTTTGTCTTGAATTTGCGGCCTCGAATTTGTTAGGTTTCTGAGGTATGTTCTTTTGGAGTCTCAAAGGTTAGGAACTCACTTATTTTTAAAATCTCTAGTTGTCTTTCGGGTCCAGGCCTTTGAGATGGGAATGGGTGATCTGGATAGGGTTGCAAGGTAAAACCGAAAAACTAATAAAACCTTTATACCGATCAAAACCGACATCAGTTTGGCGAAACTGCCAAATCGAAGGTAACCGGTGTGGACCAATTCAGTAGTTATATATAAATTTTGGTTTGGCTTTTGAATTCCTGTGAATGATTTAAACGGTTTGGTTCTGATTTGGCTTTCAAACCGAACCGAACCGAACCATTTACACCCCTAGCTTTGGGTGTGCACTGGGGCGAAGTTTCCATTTCCGGTTATCAAGAAAAAAATTGATCTAGTTGTTTGTTTTTGGGAATTTATCCTCCATAGCATATTTTTTGCTCTTCATTATAATTATAACACATTTTGCCCAAAATTGCTATTCTAACATCATCAGATTTCTATCAGTTCAATCGATAGACTTTAGACTTCTATCAGTTCAACTGATAGACTTCTGTTGATTTTGAGTAATTGAACAACGCAAATTGATAGACTTCAATCATTTTTGTGCCACAAATGAATAAGTTTGGGAATTGTGCTATACATGGATAATTATTTTGTTTTTTTTAATATACATGCAAAATCCCCTTATAATAATACTTTGGAAATTTATCCTCCATAACATATTTTTGGCTCTTCGTTACAATTGTAGCCCATTTTTAAAAATAATTTCATTCATAGTATATTTTACCCAAAATTCCTATTTAGACTTCTATCAATTCAACTGATAGATTTTAGATTTCTATCAGTTCAACTGATAGATTTTAGATTTCTATCAGTTCAACTGATAGACTTTAGACTTCTATCAGTCAACTAATAGGCTTCTATCAGTTCAATTGATAGACTTAGACTTCTATCAATTCAACTGATAGACTTCAATCGGCAAACTGATAGACTTCAATCACTTTTGTGCCACAAATGAATAAGTTTGAAAATTGTGCTATACATGGAATTATTTTGTCTTTTTATAATCTACCTGCAAAAACCCCTTTGTTTTTCTCATGTGGGGTTTTGATTTAGATAACTGGAGTGTGAAGGCGATCAGGAGAAAGACCACTGGAACTGGACGGATGAGATACATGCGCCATGTTCCTCGTAGATTTAAGAGTGGTTTCAGAGAAGGTAATAGTTTGTGTTTGTGCTTTCATTTTCACCTCATCAATGTGATTATTGCGGGCATTTTGTGTTTGCAATTACATGTGGATTTTGTTATTAGGTACTCAAGCAGCACCAAGGATCAAAGGAGCGGCTGCATCAGCCTAAAACATTGAAGGTTAATTGTGGCTCAGCTTTGGTGCTTTATAGTAGCTTTTAGGAGGATCTTGTCAATTTCTTACCAGAATTTATATGAATTTTGTTTGAAGATGTTATTGCATTCACTCTTTTTTATTTCTTACTATTTCGGTTACGAGATTTCTTAAGATTAGATTCAGACTGCTTTCACCTTTCGTTAATCTATATGACTTGAGTTATACA

mRNA sequence

CCTAAACCCTCGCAATATTAAGTCTGCCGCTCACATTTGAGCCCTCTTTGAATTCCATTGTTTCATCGTCAAATTCGATCAAATGGGAAAGGGAACGGGAAGTTTTGGTAAGAGGAGGAACAAGACCCACACTCTGTGTGTTAGGTGTGGCCGCCGGAGTTTCCACCTGCAGAAGAGTCGGTGCTCCGCTTGCGCATTTCCGGCCGCCCGTAAGCGAACATATAACTGGAGTGTGAAGGCGATCAGGAGAAAGACCACTGGAACTGGACGGATGAGATACATGCGCCATGTTCCTCGTAGATTTAAGAGTGGTTTCAGAGAAGGTACTCAAGCAGCACCAAGGATCAAAGGAGCGGCTGCATCAGCCTAAAACATTGAAGGTTAATTGTGGCTCAGCTTTGGTGCTTTATAGTAGCTTTTAGGAGGATCTTGTCAATTTCTTACCAGAATTTATATGAATTTTGTTTGAAGATGTTATTGCATTCACTCTTTTTTATTTCTTACTATTTCGGTTACGAGATTTCTTAAGATTAGATTCAGACTGCTTTCACCTTTCGTTAATCTATATGACTTGAGTTATACA

Coding sequence (CDS)

ATGGGAAAGGGAACGGGAAGTTTTGGTAAGAGGAGGAACAAGACCCACACTCTGTGTGTTAGGTGTGGCCGCCGGAGTTTCCACCTGCAGAAGAGTCGGTGCTCCGCTTGCGCATTTCCGGCCGCCCGTAAGCGAACATATAACTGGAGTGTGAAGGCGATCAGGAGAAAGACCACTGGAACTGGACGGATGAGATACATGCGCCATGTTCCTCGTAGATTTAAGAGTGGTTTCAGAGAAGGTACTCAAGCAGCACCAAGGATCAAAGGAGCGGCTGCATCAGCCTAA

Protein sequence

MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
Homology
[Close]
BLAST of Sed0022752 vs. NCBI nr
Match: XP_022955411.1 (60S ribosomal protein L37-3 [Cucurbita moschata] >XP_022979289.1 60S ribosomal protein L37-3 [Cucurbita maxima] >XP_023526471.1 60S ribosomal protein L37-3 [Cucurbita pepo subsp. pepo] >KAG6581895.1 60S ribosomal protein L37-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018329.1 60S ribosomal protein L37-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRYMRHVPRRFKSGFREGTQAAPR KGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA 95

[Close]
BLAST of Sed0022752 vs. NCBI nr
Match: XP_031252760.1 (60S ribosomal protein L37-3 [Pistacia vera] >KAF3450755.1 hypothetical protein FNV43_RR06844 [Rhamnella rubrinervis])

HSP 1 Score: 188.0 bits (476), Expect = 3.9e-44
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+RHVPRRFKSGFREGTQAAPR KGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 95

[Close]
BLAST of Sed0022752 vs. NCBI nr
Match: XP_038717722.1 (60S ribosomal protein L37-3 [Tripterygium wilfordii] >KAF5739145.1 60S ribosomal protein L37-3 [Tripterygium wilfordii])

HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+RH+PRRFKSGFREGTQAAPR KGAAA+A
Sbjct: 61 TGRMRYLRHLPRRFKSGFREGTQAAPRSKGAAATA 95

[Close]
BLAST of Sed0022752 vs. NCBI nr
Match: XP_022150495.1 (60S ribosomal protein L37-3 [Momordica charantia] >XP_022948866.1 60S ribosomal protein L37-3-like [Cucurbita moschata] >XP_022998691.1 60S ribosomal protein L37-3-like [Cucurbita maxima] >XP_023523625.1 60S ribosomal protein L37-3-like [Cucurbita pepo subsp. pepo] >KAG6606766.1 60S ribosomal protein L37-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRYMRHVPRRFKSGFREGT+AAPR KGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTEAAPRSKGAAASA 95

[Close]
BLAST of Sed0022752 vs. NCBI nr
Match: XP_019448155.1 (PREDICTED: 60S ribosomal protein L37-3 [Lupinus angustifolius] >OIW09097.1 hypothetical protein TanjilG_16324 [Lupinus angustifolius])

HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+RHVPRRFKSGFREGT+AAPR KGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA 95

[Close]
BLAST of Sed0022752 vs. ExPASy Swiss-Prot
Match: Q8LEM8 (60S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-42
Identity = 83/95 (87.37%), Postives = 92/95 (96.84%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+R+VPRRFK+GFREGT+A PR K +A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

[Close]
BLAST of Sed0022752 vs. ExPASy Swiss-Prot
Match: Q43292 (60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 3.8e-42
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MTKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+R+VPRRFK+GFREGT+A PR KG A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]
BLAST of Sed0022752 vs. ExPASy Swiss-Prot
Match: Q8LFH7 (60S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 6.4e-42
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+R+VPRRFK+ FREGTQA PR K AA+S+
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

[Close]
BLAST of Sed0022752 vs. ExPASy Swiss-Prot
Match: Q9VXX8 (Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37a PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 9.6e-30
Identity = 61/87 (70.11%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          M KGT SFGKR NKTHTLC RCGR S+H+QKS C+ C +PAA+ R+YNWSVKA RRKTTG
Sbjct: 1  MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPR 88
          TGRM++++ V RRF++GFREGTQA P+
Sbjct: 61 TGRMQHLKVVRRRFRNGFREGTQAKPK 87

[Close]
BLAST of Sed0022752 vs. ExPASy Swiss-Prot
Match: Q90YT1 (60S ribosomal protein L37 OS=Ictalurus punctatus OX=7998 GN=rpl37 PE=3 SV=3)

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-29
Identity = 64/95 (67.37%), Postives = 73/95 (76.84%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKR YNWS KA RR TTG
Sbjct: 1  MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRSTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMR+M+ V RRF++GFREGT   PR    AAS+
Sbjct: 61 TGRMRHMKVVFRRFRNGFREGTVPKPRRAAVAASS 95

[Close]
BLAST of Sed0022752 vs. ExPASy TrEMBL
Match: A0A6J1IW96 (Ribosomal protein L37 OS=Cucurbita maxima OX=3661 GN=LOC111479057 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.4e-45
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRYMRHVPRRFKSGFREGTQAAPR KGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA 95

[Close]
BLAST of Sed0022752 vs. ExPASy TrEMBL
Match: A0A6J1GTP8 (Ribosomal protein L37 OS=Cucurbita moschata OX=3662 GN=LOC111457445 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.4e-45
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRYMRHVPRRFKSGFREGTQAAPR KGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA 95

[Close]
BLAST of Sed0022752 vs. ExPASy TrEMBL
Match: A0A6J1KAY5 (Ribosomal protein L37 OS=Cucurbita maxima OX=3661 GN=LOC111493277 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRYMRHVPRRFKSGFREGT+AAPR KGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTEAAPRSKGAAASA 95

[Close]
BLAST of Sed0022752 vs. ExPASy TrEMBL
Match: A0A7J7CYG1 (Ribosomal protein L37 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00345 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+RH+PRRFKSGFREGTQAAPR KGAAA+A
Sbjct: 61 TGRMRYLRHLPRRFKSGFREGTQAAPRSKGAAATA 95

[Close]
BLAST of Sed0022752 vs. ExPASy TrEMBL
Match: A0A6J1D8M5 (Ribosomal protein L37 OS=Momordica charantia OX=3673 GN=LOC111018628 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRYMRHVPRRFKSGFREGT+AAPR KGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTEAAPRSKGAAASA 95

[Close]
BLAST of Sed0022752 vs. TAIR 10
Match: AT3G16080.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 173.3 bits (438), Expect = 9.2e-44
Identity = 83/95 (87.37%), Postives = 92/95 (96.84%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+R+VPRRFK+GFREGT+A PR K +A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

[Close]
BLAST of Sed0022752 vs. TAIR 10
Match: AT1G52300.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-43
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MTKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+R+VPRRFK+GFREGT+A PR KG A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]
BLAST of Sed0022752 vs. TAIR 10
Match: AT1G15250.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 171.0 bits (432), Expect = 4.6e-43
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA 96
          TGRMRY+R+VPRRFK+ FREGTQA PR K AA+S+
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

The following BLAST results are available for this feature:
BLAST of Sed0022752 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955411.11.3e-4498.9560S ribosomal protein L37-3 [Cucurbita moschata] >XP_022979289.1 60S ribosomal p... [more]
XP_031252760.13.9e-4497.8960S ribosomal protein L37-3 [Pistacia vera] >KAF3450755.1 hypothetical protein F... [more]
XP_038717722.11.5e-4395.7960S ribosomal protein L37-3 [Tripterygium wilfordii] >KAF5739145.1 60S ribosomal... [more]
XP_022150495.11.5e-4396.8460S ribosomal protein L37-3 [Momordica charantia] >XP_022948866.1 60S ribosomal ... [more]
XP_019448155.11.9e-4395.79PREDICTED: 60S ribosomal protein L37-3 [Lupinus angustifolius] >OIW09097.1 hypot... [more]
BLAST of Sed0022752 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LEM81.3e-4287.3760S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1[more]
Q432923.8e-4287.3760S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2[more]
Q8LFH76.4e-4287.3760S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1[more]
Q9VXX89.6e-3070.11Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37... [more]
Q90YT13.6e-2967.3760S ribosomal protein L37 OS=Ictalurus punctatus OX=7998 GN=rpl37 PE=3 SV=3[more]
BLAST of Sed0022752 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IW966.4e-4598.95Ribosomal protein L37 OS=Cucurbita maxima OX=3661 GN=LOC111479057 PE=3 SV=1[more]
A0A6J1GTP86.4e-4598.95Ribosomal protein L37 OS=Cucurbita moschata OX=3662 GN=LOC111457445 PE=3 SV=1[more]
A0A6J1KAY57.1e-4496.84Ribosomal protein L37 OS=Cucurbita maxima OX=3661 GN=LOC111493277 PE=3 SV=1[more]
A0A7J7CYG17.1e-4495.79Ribosomal protein L37 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00345 PE... [more]
A0A6J1D8M57.1e-4496.84Ribosomal protein L37 OS=Momordica charantia OX=3673 GN=LOC111018628 PE=3 SV=1[more]
BLAST of Sed0022752 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G16080.19.2e-4487.37Zinc-binding ribosomal protein family protein [more]
AT1G52300.12.7e-4387.37Zinc-binding ribosomal protein family protein [more]
AT1G15250.14.6e-4387.37Zinc-binding ribosomal protein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 1..87
e-value: 1.0E-45
score: 155.9
IPR001569Ribosomal protein L37ePFAMPF01907Ribosomal_L37ecoord: 3..53
e-value: 1.5E-25
score: 89.1
IPR001569Ribosomal protein L37eHAMAPMF_00547Ribosomal_L37ecoord: 2..53
score: 16.119484
NoneNo IPR availablePANTHERPTHR10768:SF28RIBOSOMAL PROTEIN L37coord: 1..95
NoneNo IPR availablePANTHERPTHR1076860S RIBOSOMAL PROTEIN L37coord: 1..95
IPR018267Ribosomal protein L37e, conserved sitePROSITEPS01077RIBOSOMAL_L37Ecoord: 4..23
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0022752.1Sed0022752.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome