Sed0022708 (gene) Chayote v1

Overview


Name	Sed0022708
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function, DUF584
Location	LG11: 27890997 .. 27892231 (-)
RNA-Seq Expression	Sed0022708
Synteny	Sed0022708

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCACAAATTGACCTTTTTTGTCTACAAAATTCGCCATATAAATATATAAAACATAAAAAAAGAAGAAGAAAATGAAAACCTGCATCCTCTCACGAGTTGGACGACGGCGGCTGTGTTTCTGAAATTCCGATTTCCGTACAGATCCGCCATTGCCATGGACCTCAAGCTCCCTTCCTCCCGTTTCCGCCACCGCAAATCCCCCTCCTCCGACCGATTTCTCACCTCCTTCCCTTCCCCCGCCGCCGCCGCCTCTGCAAACCCTAGCTCCGCCGCCGACGACGGCGACGCCGACCTCAACGAGGACGACCTCTTCTGGACTGGCGATTTATCTGCCGATTCCGGTCACCATAGCCACTCCAGTCCTTCCTCCTCCACTCCGCATCACCATTTCCATCACCTCCACCCTCACAAGGGTTTTCCCCTTCCCGAGACCTTCGGCATCCTCGCCGCGCTCCCGGAGAACGAGCCGTCTTCCAGCCTGAGGAACTCCTCGCATTTCTACCACAAGGCCTCTGTTTCGTCTTCGTCTTCTTCCTCGCCTTCCTCCTCTCGGATGATTCCGTCTATCCCTAAATCTCCTCTGGATCGGTTGCCTTTACCGGTTTCTTCCGCGTTGAAGTACCAGTCGGCTCCGGTGAATGTGCCGATGATGTCCAAGGCGGCTCCGAGACACGACGAGGTCGATATGGATGATGTGGATGATATTGATGAAGGAGACGGGGAGATGCTGCCGCCTCATGAAATGGTGGCGAGGAGCTTGGCGCAATCGCCATTGTTGTCTTGCTCCGTGCTCGAGGGCGCGGGCAGGACGTTGAAGGGCAGGGATCTTCGCCAGGTTCGTAACGCCGTTTGGAGACGAACGGGGTTTCTTGATTGAGGAATTGAATTGCTGTAATTACTTCTGGAGAACTGATCTTCACCAGGTTCACTTTGGCACTATTTGTGTCGCTCTTTTTAGAATGTTTGAGGGTCCAGGAATATTTGAATCTGCTCGACACTCATCGTAACAAGGATTTGGAATTGGCATTGTAATTATCTCTCAAGGGCGTCTAAGATTTTACTTTGAAGCTTATTTGTAAGTTTGACTATTTTCTGAAACATTTTTCAATCTATCAATTATTGAATTCTAGTAATGTTGTCAGATTTGCATTTAATCTTTCAGTGAGAATGTCATTTTTTTTATAGTCCCAAATGGTGTTTGTTGAATTTGGTTATTGTTTCCTTTATCTAGC

mRNA sequence

TTTCCACAAATTGACCTTTTTTGTCTACAAAATTCGCCATATAAATATATAAAACATAAAAAAAGAAGAAGAAAATGAAAACCTGCATCCTCTCACGAGTTGGACGACGGCGGCTGTGTTTCTGAAATTCCGATTTCCGTACAGATCCGCCATTGCCATGGACCTCAAGCTCCCTTCCTCCCGTTTCCGCCACCGCAAATCCCCCTCCTCCGACCGATTTCTCACCTCCTTCCCTTCCCCCGCCGCCGCCGCCTCTGCAAACCCTAGCTCCGCCGCCGACGACGGCGACGCCGACCTCAACGAGGACGACCTCTTCTGGACTGGCGATTTATCTGCCGATTCCGGTCACCATAGCCACTCCAGTCCTTCCTCCTCCACTCCGCATCACCATTTCCATCACCTCCACCCTCACAAGGGTTTTCCCCTTCCCGAGACCTTCGGCATCCTCGCCGCGCTCCCGGAGAACGAGCCGTCTTCCAGCCTGAGGAACTCCTCGCATTTCTACCACAAGGCCTCTGTTTCGTCTTCGTCTTCTTCCTCGCCTTCCTCCTCTCGGATGATTCCGTCTATCCCTAAATCTCCTCTGGATCGGTTGCCTTTACCGGTTTCTTCCGCGTTGAAGTACCAGTCGGCTCCGGTGAATGTGCCGATGATGTCCAAGGCGGCTCCGAGACACGACGAGGTCGATATGGATGATGTGGATGATATTGATGAAGGAGACGGGGAGATGCTGCCGCCTCATGAAATGGTGGCGAGGAGCTTGGCGCAATCGCCATTGTTGTCTTGCTCCGTGCTCGAGGGCGCGGGCAGGACGTTGAAGGGCAGGGATCTTCGCCAGGTTCGTAACGCCGTTTGGAGACGAACGGGGTTTCTTGATTGAGGAATTGAATTGCTGTAATTACTTCTGGAGAACTGATCTTCACCAGGTTCACTTTGGCACTATTTGTGTCGCTCTTTTTAGAATGTTTGAGGGTCCAGGAATATTTGAATCTGCTCGACACTCATCGTAACAAGGATTTGGAATTGGCATTGTAATTATCTCTCAAGGGCGTCTAAGATTTTACTTTGAAGCTTATTTGTAAGTTTGACTATTTTCTGAAACATTTTTCAATCTATCAATTATTGAATTCTAGTAATGTTGTCAGATTTGCATTTAATCTTTCAGTGAGAATGTCATTTTTTTTATAGTCCCAAATGGTGTTTGTTGAATTTGGTTATTGTTTCCTTTATCTAGC

Coding sequence (CDS)

ATGGACCTCAAGCTCCCTTCCTCCCGTTTCCGCCACCGCAAATCCCCCTCCTCCGACCGATTTCTCACCTCCTTCCCTTCCCCCGCCGCCGCCGCCTCTGCAAACCCTAGCTCCGCCGCCGACGACGGCGACGCCGACCTCAACGAGGACGACCTCTTCTGGACTGGCGATTTATCTGCCGATTCCGGTCACCATAGCCACTCCAGTCCTTCCTCCTCCACTCCGCATCACCATTTCCATCACCTCCACCCTCACAAGGGTTTTCCCCTTCCCGAGACCTTCGGCATCCTCGCCGCGCTCCCGGAGAACGAGCCGTCTTCCAGCCTGAGGAACTCCTCGCATTTCTACCACAAGGCCTCTGTTTCGTCTTCGTCTTCTTCCTCGCCTTCCTCCTCTCGGATGATTCCGTCTATCCCTAAATCTCCTCTGGATCGGTTGCCTTTACCGGTTTCTTCCGCGTTGAAGTACCAGTCGGCTCCGGTGAATGTGCCGATGATGTCCAAGGCGGCTCCGAGACACGACGAGGTCGATATGGATGATGTGGATGATATTGATGAAGGAGACGGGGAGATGCTGCCGCCTCATGAAATGGTGGCGAGGAGCTTGGCGCAATCGCCATTGTTGTCTTGCTCCGTGCTCGAGGGCGCGGGCAGGACGTTGAAGGGCAGGGATCTTCGCCAGGTTCGTAACGCCGTTTGGAGACGAACGGGGTTTCTTGATTGA

Protein sequence

MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSAADDGDADLNEDDLFWTGDLSADSGHHSHSSPSSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFYHKASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKAAPRHDEVDMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD

Homology

[Close]

BLAST of Sed0022708 vs. NCBI nr
Match: KGN64943.1 (hypothetical protein Csa_022813 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 4.2e-95
Identity = 195/244 (79.92%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSAADDGDADLNEDDLFWTGDLSA 60
           MDL LPSSRFRHR SPSS+RFL SFPSP   +S   S+ A D D++LNEDD+FWTGD ++
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFYH 120
           DS HHSHS+P   SSSTP HH HHL  HKGFPLPETFGILAALPENE SSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKA-APRHDEV 180
           KASVSSSSSSSPSSSRMIP+IPK PLDRLPLP+S++LKYQSAPVNVP+MSKA   R  EV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
              DVDD+DE DGEMLPPHE+VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 ---DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240

[Close]

BLAST of Sed0022708 vs. NCBI nr
Match: XP_038894579.1 (uncharacterized protein LOC120083099 [Benincasa hispida])

HSP 1 Score: 355.9 bits (912), Expect = 2.7e-94
Identity = 197/245 (80.41%), Postives = 211/245 (86.12%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSA-ADDGDADLNEDDLFWTGDLS 60
           MDL LPS RFRHRKSPSS+RFL SF SP    +ANPSS    D D +LNEDD+FWTGD +
Sbjct: 1   MDLNLPSFRFRHRKSPSSERFLASFHSP-PVRTANPSSTNGVDDDTELNEDDVFWTGDFA 60

Query: 61  ADSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFY 120
           ADS HHSHS+P   SSSTP HH HHL  HKGFPLPETFGILAALPENE SSSLRNSSHFY
Sbjct: 61  ADSAHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFY 120

Query: 121 HKASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKA-APRHDE 180
           HKASVSSSSSSSPSSSRMIP+IPK PL+RLPLP+SS+LKYQSAPVNVP+MSKA   R  E
Sbjct: 121 HKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPIMSKAVVQRQQE 180

Query: 181 VDMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRR 240
           +   DVDD+DE DGEMLPPHE+VARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Sbjct: 181 I---DVDDVDEDDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRR 240

[Close]

BLAST of Sed0022708 vs. NCBI nr
Match: XP_022945942.1 (uncharacterized protein LOC111450033 [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93
Identity = 196/248 (79.03%), Postives = 214/248 (86.29%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSA----ADDGDADLNEDDLFWTG 60
           MDL  PSSRFRHRKSPSS+RFL SF SP+   S NP+SA     DD +++LNEDD+FWTG
Sbjct: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPS-NPTSANALDNDDNNSELNEDDVFWTG 60

Query: 61  DLSADSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSS 120
           D +ADS HH+HS+P   SSSTP HH HHL  HKGFP  ETFGILAALPENE SSSLRNSS
Sbjct: 61  DFAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSS 120

Query: 121 HFYHKASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKAA-PR 180
           +FYHKASVSSSSSSSPSSSRMIP+IPK PL+RLPLP+SS+LKYQSAPVNVPMMSKAA  R
Sbjct: 121 YFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQR 180

Query: 181 HDEVDMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAV 240
           H E+   DVDD+DE DGEMLPPHE+VARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAV
Sbjct: 181 HQEI---DVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAV 240

[Close]

BLAST of Sed0022708 vs. NCBI nr
Match: XP_008461249.1 (PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903097.1 PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903098.1 PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903100.1 PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >KAA0035493.1 Senescence regulator [Cucumis melo var. makuwa] >TYK31034.1 Senescence regulator [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 6.7e-93
Identity = 193/244 (79.10%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSAADDGDADLNEDDLFWTGDLSA 60
           MDL L SSRFRHR SPSS+RFL SFPSP    S   S+ A D D++LNEDD+FWTGD ++
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFYH 120
           DS HHSHS+P   SSSTP HH HHL  HKGFPLPETFGILAALPENE SSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKA-APRHDEV 180
           KASVSSSSSSSPSSSRMIP+IPK PLDRLPLP+S++LKYQSAPVNVP+MSKA   R  EV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
              DVD +DE DGEMLPPHE+VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 ---DVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240

[Close]

BLAST of Sed0022708 vs. NCBI nr
Match: XP_022967102.1 (uncharacterized protein LOC111466606 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 1.9e-92
Identity = 194/247 (78.54%), Postives = 212/247 (85.83%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSA---ADDGDADLNEDDLFWTGD 60
           M+L  PSSRFRHRKSP S+RFL SF SP+   S NP+SA    DD +++LNEDD+FWTGD
Sbjct: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPS-NPTSANALDDDNNSELNEDDVFWTGD 60

Query: 61  LSADSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSH 120
            +ADS HH+HS+P   SSSTP HH HHL  HKGFP  ETFGILAALPENE SSSLRNSSH
Sbjct: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSH 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKAA-PRH 180
           FYHKASVSSSSSSSPSSSRMIP+IPK PL+RLPL +SS+LKYQSAPVNVPMMSKAA  RH
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRH 180

Query: 181 DEVDMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240
            E+   DVDD+DE DGEMLPPHE+VARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW
Sbjct: 181 QEI---DVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240

[Close]

BLAST of Sed0022708 vs. ExPASy TrEMBL
Match: A0A0A0LT40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165750 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95
Identity = 195/244 (79.92%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSAADDGDADLNEDDLFWTGDLSA 60
           MDL LPSSRFRHR SPSS+RFL SFPSP   +S   S+ A D D++LNEDD+FWTGD ++
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFYH 120
           DS HHSHS+P   SSSTP HH HHL  HKGFPLPETFGILAALPENE SSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKA-APRHDEV 180
           KASVSSSSSSSPSSSRMIP+IPK PLDRLPLP+S++LKYQSAPVNVP+MSKA   R  EV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
              DVDD+DE DGEMLPPHE+VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 ---DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240

[Close]

BLAST of Sed0022708 vs. ExPASy TrEMBL
Match: A0A6J1G2B0 (uncharacterized protein LOC111450033 OS=Cucurbita moschata OX=3662 GN=LOC111450033 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.5e-94
Identity = 196/248 (79.03%), Postives = 214/248 (86.29%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSA----ADDGDADLNEDDLFWTG 60
           MDL  PSSRFRHRKSPSS+RFL SF SP+   S NP+SA     DD +++LNEDD+FWTG
Sbjct: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPS-NPTSANALDNDDNNSELNEDDVFWTG 60

Query: 61  DLSADSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSS 120
           D +ADS HH+HS+P   SSSTP HH HHL  HKGFP  ETFGILAALPENE SSSLRNSS
Sbjct: 61  DFAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSS 120

Query: 121 HFYHKASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKAA-PR 180
           +FYHKASVSSSSSSSPSSSRMIP+IPK PL+RLPLP+SS+LKYQSAPVNVPMMSKAA  R
Sbjct: 121 YFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQR 180

Query: 181 HDEVDMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAV 240
           H E+   DVDD+DE DGEMLPPHE+VARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAV
Sbjct: 181 HQEI---DVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAV 240

[Close]

BLAST of Sed0022708 vs. ExPASy TrEMBL
Match: A0A1S4E4F1 (uncharacterized protein LOC103499884 OS=Cucumis melo OX=3656 GN=LOC103499884 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93
Identity = 193/244 (79.10%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSAADDGDADLNEDDLFWTGDLSA 60
           MDL L SSRFRHR SPSS+RFL SFPSP    S   S+ A D D++LNEDD+FWTGD ++
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFYH 120
           DS HHSHS+P   SSSTP HH HHL  HKGFPLPETFGILAALPENE SSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKA-APRHDEV 180
           KASVSSSSSSSPSSSRMIP+IPK PLDRLPLP+S++LKYQSAPVNVP+MSKA   R  EV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
              DVD +DE DGEMLPPHE+VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 ---DVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240

[Close]

BLAST of Sed0022708 vs. ExPASy TrEMBL
Match: A0A5A7SY45 (Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002880 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93
Identity = 193/244 (79.10%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSAADDGDADLNEDDLFWTGDLSA 60
           MDL L SSRFRHR SPSS+RFL SFPSP    S   S+ A D D++LNEDD+FWTGD ++
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFYH 120
           DS HHSHS+P   SSSTP HH HHL  HKGFPLPETFGILAALPENE SSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKA-APRHDEV 180
           KASVSSSSSSSPSSSRMIP+IPK PLDRLPLP+S++LKYQSAPVNVP+MSKA   R  EV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
              DVD +DE DGEMLPPHE+VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 ---DVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240

[Close]

BLAST of Sed0022708 vs. ExPASy TrEMBL
Match: A0A6J1HPU4 (uncharacterized protein LOC111466606 OS=Cucurbita maxima OX=3661 GN=LOC111466606 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 9.4e-93
Identity = 194/247 (78.54%), Postives = 212/247 (85.83%), Query Frame = 0


Query: 1   MDLKLPSSRFRHRKSPSSDRFLTSFPSPAAAASANPSSA---ADDGDADLNEDDLFWTGD 60
           M+L  PSSRFRHRKSP S+RFL SF SP+   S NP+SA    DD +++LNEDD+FWTGD
Sbjct: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPS-NPTSANALDDDNNSELNEDDVFWTGD 60

Query: 61  LSADSGHHSHSSP---SSSTPHHHFHHLHPHKGFPLPETFGILAALPENEPSSSLRNSSH 120
            +ADS HH+HS+P   SSSTP HH HHL  HKGFP  ETFGILAALPENE SSSLRNSSH
Sbjct: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSH 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQSAPVNVPMMSKAA-PRH 180
           FYHKASVSSSSSSSPSSSRMIP+IPK PL+RLPL +SS+LKYQSAPVNVPMMSKAA  RH
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRH 180

Query: 181 DEVDMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240
            E+   DVDD+DE DGEMLPPHE+VARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW
Sbjct: 181 QEI---DVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240

[Close]

BLAST of Sed0022708 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-34
Identity = 123/244 (50.41%), Postives = 145/244 (59.43%), Query Frame = 0


Query: 25  FPSPAAAASANPSSAADDGDADLNEDDLFWTGDLSADSGHHSHSSPSS----STPHHHFH 84
           F SP++ A     + +D  D +LNEDD+F   D+S       HS  SS     TP     
Sbjct: 9   FSSPSSLA-----TISDSADGELNEDDIF-AIDISHAPPQARHSPVSSPAKQQTPARQLQ 68

Query: 85  HLHPHKGFPLPETFGILAALPENEPSSSLRNSSHFYHK----------ASVSSSSSS--- 144
                 G    E  GILAALPE+  SSS   S  F+HK          ++ SSSSSS   
Sbjct: 69  --RSKSGLKNVEASGILAALPESSGSSSYL-SHVFHHKPAAALSTSVSSTASSSSSSGGG 128

Query: 145 ----SPSSSRMIPSIPKSPLDRLPLPVS--SALKY-QSAPVNVPMMSKA-APRH-DEVDM 204
               S SS+R IP+ PK P +RLP   S     KY QSAPV VP++S A   RH  E  +
Sbjct: 129 ASAGSSSSARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKL 188

Query: 205 DDV--DDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 241
            DV  DD +E +GEMLPPHE+VARSLAQS LLSCSVLEGAGRTLKGRDLRQVRNAV+RRT
Sbjct: 189 TDVVDDDEEEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRT 243

[Close]

BLAST of Sed0022708 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 67/154 (43.51%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 96  ILAALPENEPSSSLRN--SSHFYHKASVSSSSSSSPSSSRMIPSIPKSPLDRLPLPVSSA 155
           + + L E E SS       SHF    S SSSSSSSP + R    +             S 
Sbjct: 32  VWSVLREGETSSPEMKIPKSHF----SSSSSSSSSPWNIRRSKEV-------------SG 91

Query: 156 LKYQSAPVNVPMM------SKAAPRHDEVDMDDVDDIDE-GDGEMLPPHEMVARSLAQSP 215
           +K  SAP+NVP        SK+  R   +     DD DE  DG M+PPHE VAR LA++ 
Sbjct: 92  VKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQ 151

Query: 216 LLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD 241
           + S S+ EG GRTLKGRDL +VRNAV  +TGFL+
Sbjct: 152 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of Sed0022708 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 75.5 bits (184), Expect = 6.6e-14
Identity = 59/146 (40.41%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 102 ENEPSSSLRNSSHFYHKASVSSS----SSSSPSSSRMIPSIPKSPLDRLPLPVSSALKYQ 161
           E E  S LR S     +  +S S    S+SS SS+R IP   +         VS   K  
Sbjct: 9   EEEVWSVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKGNE---------VSGGAKQS 68

Query: 162 SAPVNVPMMSKA---APRHDEVDMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLE 221
           SAP+N+P  SK    + ++    +      D+ +G M+PPHE+VA+ LA++ + S S+ E
Sbjct: 69  SAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFSMCE 128

Query: 222 GAGRTLKGRDLRQVRNAVWRRTGFLD 241
           G GRTLKGRDL + RNAV  RTGFL+
Sbjct: 129 GIGRTLKGRDLSKTRNAVLTRTGFLE 145

[Close]

BLAST of Sed0022708 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 73.6 bits (179), Expect = 2.5e-13
Identity = 46/89 (51.69%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 158 SAPVNVPMMSKAAPRHDEV----DMDDVDDIDEGDGEMLPPHEMVARSLAQSPLL----S 217
           SAPVNVP  SK   R D V    ++DD DD DE  G M+PPHE +A+S A+         
Sbjct: 115 SAPVNVPDWSKIY-RVDSVESIHELDDEDDEDEESG-MMPPHEYLAKSQARRSRKIGGGG 174

Query: 218 CSVLEGAGRTLKGRDLRQVRNAVWRRTGF 239
            SV +G GRTLKGR+LR+VR+A+W +TGF
Sbjct: 175 ASVFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of Sed0022708 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 71.6 bits (174), Expect = 9.5e-13
Identity = 55/124 (44.35%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 126 SSSPSSSRMIPSIPKS--PLDRLPLPVSSALKYQSAPVNVPMMSKAA-------PRHDEV 185
           S SP   R I S  +S       P   SSA    S PVNVP  SK          R    
Sbjct: 44  SDSPDFCRKISSSVRSGKKSSNRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIE 103

Query: 186 DMDDVDDIDEGDGEMLPPHEMVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 241
           D DD DD +E  G+ LPPHE     LA++ + S SV EG GRTLKGRDL +VRNA++ + 
Sbjct: 104 DNDDDDDDNEDGGDWLPPHEF----LAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKF 163

The following BLAST results are available for this feature:

BLAST of Sed0022708 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64943.1	4.2e-95	79.92	hypothetical protein Csa_022813 [Cucumis sativus]	[more]
XP_038894579.1	2.7e-94	80.41	uncharacterized protein LOC120083099 [Benincasa hispida]	[more]
XP_022945942.1	1.8e-93	79.03	uncharacterized protein LOC111450033 [Cucurbita moschata]	[more]
XP_008461249.1	6.7e-93	79.10	PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903097.1 P...	[more]
XP_022967102.1	1.9e-92	78.54	uncharacterized protein LOC111466606 [Cucurbita maxima]	[more]

BLAST of Sed0022708 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022708 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT40	2.0e-95	79.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165750 PE=4 SV=1	[more]
A0A6J1G2B0	8.5e-94	79.03	uncharacterized protein LOC111450033 OS=Cucurbita moschata OX=3662 GN=LOC1114500...	[more]
A0A1S4E4F1	3.2e-93	79.10	uncharacterized protein LOC103499884 OS=Cucumis melo OX=3656 GN=LOC103499884 PE=...	[more]
A0A5A7SY45	3.2e-93	79.10	Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455...	[more]
A0A6J1HPU4	9.4e-93	78.54	uncharacterized protein LOC111466606 OS=Cucurbita maxima OX=3661 GN=LOC111466606...	[more]

BLAST of Sed0022708 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15040.1	2.6e-34	50.41	Protein of unknown function, DUF584	[more]
AT4G04630.1	1.2e-15	43.51	Protein of unknown function, DUF584	[more]
AT4G21970.1	6.6e-14	40.41	Protein of unknown function, DUF584	[more]
AT1G61930.1	2.5e-13	51.69	Protein of unknown function, DUF584	[more]
AT5G60680.1	9.5e-13	44.35	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 46..240 e-value: 4.1E-43 score: 148.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..34
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 5..240
None	No IPR available	PANTHER	PTHR33083:SF50	SUBFAMILY NOT NAMED	coord: 5..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022708.1	Sed0022708.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding