Sed0022560 (gene) Chayote v1

Overview


Name	Sed0022560
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein s2
Location	LG03: 40078954 .. 40082025 (-)
RNA-Seq Expression	Sed0022560
Synteny	Sed0022560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAAGAGGAGGAGATCGCGGCGGTTTCGGAAGAGGATTCGGCGGCAGAGGTCGTGGTGGTGATCGTGGACGTGGCCGCCGTCGTGCCGGCCGTCGCGACGAAGAGGAGAAATGGGTGCCAGTCACCAAGCTCGGTCGCCTCGTGAAGGAAGGCAAGATCCAATCACTTGAACAGATTTACCTTCATTCTCTCCCGATCAAGGAGCACCAGATCGTGGATACGCTGGTTGGCCCTAGCCTGAAAGACGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGCGCCGGGCAGAGGACTAGGTTTAAGGCCTTCGTAGTCGTCGGCGACAGCAATGGCCATGTCGGATTGGGAGTGAAGTGCAGCAAGGAGGTTGCGACTGCGATTCGTGGTGCGATTATTCTGGCCAAGTTGTCGGTTATCCCTGTGAGGAGGGGTTATTGGGGTAACAAGATCGGTAAGCCTCATACCGTGCCTTGTAAGGTTACTGGTAAGTGTGGTTCGGTTACCGTTCGTATGGTTCCGGCTCCTCGTGGTGCTGGAATTGTCGCGGCTAGGGTTCCCAAGAAGGTGCTCCAGTTTGCTGGAATTGATGATGTTTTCACTTCCTCCCGCGGATCGACTAAGACACTTGGAAACTTTGTCAAGGTATATGTTATATTATGATGTTTATATATATATATATATATATATATATATATATATATATATATATCTGTTCTACATGTATACATGTTTTGAATTTAATGTGTTATTTGTGATTGTATTTAATTTCATGTCTGGCTTCTTGCACTTTGTGAAATTGTGATTTGATTTAGTAGTTTGGCTGTGGATGTGATAGTGAATAAGGTTATTTTTTGTGGGTTCTCTCATGTTTTGAATATGATTGTAATTGATTGTGATTGTTGAATGTAAGATGGTTATTCCCGAATGATGATGTTTATATGAGTATTTGATTGCCCCTTGTATGAATTTTATGTCTGATGTGATTTTTTGATATCAAATCAGTACCAGTAATTGAATTGGATTTATGTGTGGAGGGTTTATTTGCTTATTTGGAATCATTTCAGTCATGCTTTGAGAAAATCAAGTATTTTTATTGATAACACATGGAGTCTATATCTTCATAAATTGTGCACACATTGTTGGAGATAAATTGTGCATATATTGTTGGAGATAAGATGGATAAGCCCGGAATGATGATATTGATATCAAAGTACTTGGTTGGCTCTTCTAAGAATTTTGTTTGGTGTGATTTGTTTGTGGAAAATCAGTGTTCTGTAATTGAATCGATCACGTGTGGTGGGTTATCTGCTAATTTGCAATATTTTCAGTTATGTTTGGAGAATCTCAAATACTAAATGATTATATAGTCAAATCAATTTCTTGTTAAATTGTGGGGGCTTGTTAGTTGCTTGAATAGACTGTTTATTTGTTTTTACAGCAATTTGCTGATGATGAACTAGTCTAATATGTTTTTTTTTATTAATTTAGACTTGATTTCTTCTGACATTACAAATGCTTACATTTTGGCAGGCTACCTTCGATTGTCTATTGAAAACCTATGGCTTTCTCACACCTGAGTTCTGGAGGGAGACTCGTTTCACCAAATCTCCATTCCAAGAGCACACTGATCTGTTGGCTAAACCAACTGCCAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTAATGCTTAAGATCCATAGATTTGGTATGATTTCTACAACGAAAATGTTTTTGTTAGGAACTCCATAGTATATGCTTTTCAGTTGAGTTAATTTTCTTTCAAGGATAGTCTTATTTATTTCCTATTGGCAGCTTGACTTGGTTTTTTAATTTTGATTCCATTGTCATTAATCTTTATTTTGACTGCTTTATTTTCTTATAACGATGAACCCCAAGACTAAATTTTGAATGTTATAATTTTTTTCTGAAATGAATACCCAAAGCATGCTAAGTTTAATTTACACACTAAGGAAATGTTGTGAAATAAGTGTAACATCAATTGGGATTCAGGATATTGTTTATTGATTTGATTTTCACTTTGTGATCTTATATTGGGAAGAGGGACCGTAGACCTATGTTGAAGTACAGTATTCTTCGAGCCAAATACCTCACCCATTATCAGGATCATAGTGGAGTTGGATTATTACAACTAATCAACTATCATATTATCTATTTTTTTGGTTGTTTTTTATCACGTATGAGAGTTATGGACCGAGATGCTCTTCAAAATCACAATTTGAGAACGATTTTTAAATGTTTATGTGAAATTAGCTGTATTTTTCACCAATTCTTGATTTGAAATCGTATGATGGATATTTGAAATTGTGAATCTTGAAAATCCAATGTGTAGGATACTGCAGGCTGCTGTTAATAAATTTTAAAATTGTTCCCGTTTACCTGGAAATTTGAAGTAGAACGTGTTTTTGCTCAAGCGCTGTATCCAACGTCCTAATGATTTTATGCAATTTTCTCATCATAAAACACTTTGCTTATCCAAATCCGAATTCAGCGGGAAGTTTAGGGTAGTGGGGGCTTAATTGGGTTTCAGAAAATTGGGGAAAGGGTGAAAATATTAATTAGTAAAAAGACTTTTGGAAGCTTTTTGTTTTCGTTTTCCGTAAACTTGAAGCTTATTTTAATTTGGGGTTTTGATTAGGGTGGTTTGGGACCTCCAGAATTCCCTAATCTGGGAAAGCATTGCAGCGTTCGACATTGTAAGCAGATCGATTTCTTGCCATTTACCTGTGATTATGGTCGCTAGGTTTTCAATGTCTCTGTTACAATCATTGTGGAATTTGGTTTCTCATTCTTCTTGTTATTTGGAAATTGTGTGTCAATGGTTGCCTCTGTCAAGAATGTGGTTCTGTTTATAAGTTGAATATGATTTTGCCTTACAATTGTAGAATTTGTTTAGTTGGTTCTTCATTACCACACAGACGAATCTCTAAATAAAACCAATAGAGAAATCGAAAGAAAGGTCGGC

mRNA sequence

ATGGCAGAAAGAGGAGGAGATCGCGGCGGTTTCGGAAGAGGATTCGGCGGCAGAGGTCGTGGTGGTGATCGTGGACGTGGCCGCCGTCGTGCCGGCCGTCGCGACGAAGAGGAGAAATGGGTGCCAGTCACCAAGCTCGGTCGCCTCGTGAAGGAAGGCAAGATCCAATCACTTGAACAGATTTACCTTCATTCTCTCCCGATCAAGGAGCACCAGATCGTGGATACGCTGGTTGGCCCTAGCCTGAAAGACGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGCGCCGGGCAGAGGACTAGGTTTAAGGCCTTCGTAGTCGTCGGCGACAGCAATGGCCATGTCGGATTGGGAGTGAAGTGCAGCAAGGAGGTTGCGACTGCGATTCGTGGTGCGATTATTCTGGCCAAGTTGTCGGTTATCCCTGTGAGGAGGGGTTATTGGGGTAACAAGATCGGTAAGCCTCATACCGTGCCTTGTAAGGTTACTGGTAAGTGTGGTTCGGTTACCGTTCGTATGGTTCCGGCTCCTCGTGGTGCTGGAATTGTCGCGGCTAGGGTTCCCAAGAAGGTGCTCCAGTTTGCTGGAATTGATGATGTTTTCACTTCCTCCCGCGGATCGACTAAGACACTTGGAAACTTTGTCAAGGCTACCTTCGATTGTCTATTGAAAACCTATGGCTTTCTCACACCTGAGTTCTGGAGGGAGACTCGTTTCACCAAATCTCCATTCCAAGAGCACACTGATCTGTTGGCTAAACCAACTGCCAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTAATGCTTAAGATCCATAGATTTGGGTGGTTTGGGACCTCCAGAATTCCCTAATCTGGGAAAGCATTGCAGCGTTCGACATTGTAAGCAGATCGATTTCTTGCCATTTACCTGTGATTATGGTCGCTAGGTTTTCAATGTCTCTGTTACAATCATTGTGGAATTTGGTTTCTCATTCTTCTTGTTATTTGGAAATTGTGTGTCAATGGTTGCCTCTGTCAAGAATGTGGTTCTGTTTATAAGTTGAATATGATTTTGCCTTACAATTGTAGAATTTGTTTAGTTGGTTCTTCATTACCACACAGACGAATCTCTAAATAAAACCAATAGAGAAATCGAAAGAAAGGTCGGC

Coding sequence (CDS)

ATGGCAGAAAGAGGAGGAGATCGCGGCGGTTTCGGAAGAGGATTCGGCGGCAGAGGTCGTGGTGGTGATCGTGGACGTGGCCGCCGTCGTGCCGGCCGTCGCGACGAAGAGGAGAAATGGGTGCCAGTCACCAAGCTCGGTCGCCTCGTGAAGGAAGGCAAGATCCAATCACTTGAACAGATTTACCTTCATTCTCTCCCGATCAAGGAGCACCAGATCGTGGATACGCTGGTTGGCCCTAGCCTGAAAGACGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGCGCCGGGCAGAGGACTAGGTTTAAGGCCTTCGTAGTCGTCGGCGACAGCAATGGCCATGTCGGATTGGGAGTGAAGTGCAGCAAGGAGGTTGCGACTGCGATTCGTGGTGCGATTATTCTGGCCAAGTTGTCGGTTATCCCTGTGAGGAGGGGTTATTGGGGTAACAAGATCGGTAAGCCTCATACCGTGCCTTGTAAGGTTACTGGTAAGTGTGGTTCGGTTACCGTTCGTATGGTTCCGGCTCCTCGTGGTGCTGGAATTGTCGCGGCTAGGGTTCCCAAGAAGGTGCTCCAGTTTGCTGGAATTGATGATGTTTTCACTTCCTCCCGCGGATCGACTAAGACACTTGGAAACTTTGTCAAGGCTACCTTCGATTGTCTATTGAAAACCTATGGCTTTCTCACACCTGAGTTCTGGAGGGAGACTCGTTTCACCAAATCTCCATTCCAAGAGCACACTGATCTGTTGGCTAAACCAACTGCCAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTAATGCTTAA

Protein sequence

MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTAKALLLDDAERVNA

Homology

[Close]

BLAST of Sed0022560 vs. NCBI nr
Match: XP_022928633.1 (40S ribosomal protein S2-4-like [Cucurbita moschata] >XP_022967881.1 40S ribosomal protein S2-4-like [Cucurbita maxima] >XP_023518394.1 40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo] >XP_023544834.1 40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo] >KAG6603223.1 40S ribosomal protein S2-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033531.1 40S ribosomal protein S2-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.9 bits (1348), Expect = 8.5e-145
Identity = 266/271 (98.15%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETR 240

Query: 241 FTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           FTKSPFQEHTDLLAKPT KALLLDDAERVNA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of Sed0022560 vs. NCBI nr
Match: XP_022925174.1 (40S ribosomal protein S2-4-like [Cucurbita moschata] >KAG6595664.1 40S ribosomal protein S2-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027622.1 40S ribosomal protein S2-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143
Identity = 266/272 (97.79%), Postives = 269/272 (98.90%), Query Frame = 0


Query: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGL 120
           QIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           RFTKSPFQEHTDLLAKPT KALLLDDAERVNA
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 272

[Close]

BLAST of Sed0022560 vs. NCBI nr
Match: XP_038882736.1 (40S ribosomal protein S2-4-like [Benincasa hispida])

HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143
Identity = 264/270 (97.78%), Postives = 267/270 (98.89%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 120
           IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTAKALLLDDAERVN 271
           FTKSPFQEHTDLLAKPT KALLL+D ERVN
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDPERVN 270

[Close]

BLAST of Sed0022560 vs. NCBI nr
Match: XP_008460763.1 (PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo] >KAA0056140.1 40S ribosomal protein S2-4-like [Cucumis melo var. makuwa] >TYK14145.1 40S ribosomal protein S2-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 518.8 bits (1335), Expect = 2.7e-143
Identity = 264/271 (97.42%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           FTKSPFQEHTDLLAKPT KALLL+DAERV A
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of Sed0022560 vs. NCBI nr
Match: XP_022966425.1 (40S ribosomal protein S2-4-like [Cucurbita maxima])

HSP 1 Score: 518.1 bits (1333), Expect = 4.6e-143
Identity = 265/271 (97.79%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGL 120
           QIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTAKALLLDDAERVN 271
           RFTKSPFQEHTDLLAKPT KALLLDDAERVN
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVN 271

[Close]

BLAST of Sed0022560 vs. ExPASy Swiss-Prot
Match: Q9SCM3 (40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 3.1e-126
Identity = 231/256 (90.23%), Postives = 242/256 (94.53%), Query Frame = 0


Query: 3   ERGGDRGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERGGDRG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQ
Sbjct: 7   ERGGDRGDFGRGFGGRGGGRGGPRGRG-RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQ 66

Query: 63  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 122
           IYLHSLP+KE+QI+D LVGPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGDSNGHVGLG
Sbjct: 67  IYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLG 126

Query: 123 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRGAIILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 127 VKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 186

Query: 183 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 187 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 246

Query: 243 FTKSPFQEHTDLLAKP 257
           F+KSP+QEHTD L  P
Sbjct: 247 FSKSPYQEHTDFLLIP 261

[Close]

BLAST of Sed0022560 vs. ExPASy Swiss-Prot
Match: P49688 (40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2)

HSP 1 Score: 439.5 bits (1129), Expect = 2.8e-122
Identity = 223/258 (86.43%), Postives = 237/258 (91.86%), Query Frame = 0


Query: 3   ERGGDRGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQ 62
           ERGG+RG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKLGRLV  G I+
Sbjct: 11  ERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIK 70

Query: 63  SLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGH 122
            +EQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGH
Sbjct: 71  QIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH 130

Query: 123 VGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 182
           VGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 131 VGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 190

Query: 183 PAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW 242
           PAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW
Sbjct: 191 PAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFW 250

Query: 243 RETRFTKSPFQEHTDLLA 255
           +ETRF++SP+QEHTD LA
Sbjct: 251 KETRFSRSPYQEHTDFLA 268

[Close]

BLAST of Sed0022560 vs. ExPASy Swiss-Prot
Match: Q8L8Y0 (40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2)

HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-121
Identity = 226/265 (85.28%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 2   AERGGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNG 121
             LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTAKA 261
           W+ETRF++SP+QEHTD L+     A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of Sed0022560 vs. ExPASy Swiss-Prot
Match: Q93VB8 (40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-121
Identity = 226/265 (85.28%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 2   AERGGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNG 121
             LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTAKA 261
           W+ETRF++SP+QEHTD L+     A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of Sed0022560 vs. ExPASy Swiss-Prot
Match: P15880 (40S ribosomal protein S2 OS=Homo sapiens OX=9606 GN=RPS2 PE=1 SV=2)

HSP 1 Score: 375.9 bits (964), Expect = 3.7e-103
Identity = 191/257 (74.32%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGR--RDEEEKWVPVTKLGRLVKEGKIQSL 60
           M  RGG RGGFG G  GRGRG  RGRGR R  R  + E+++W+PVTKLGRLVK+ KI+SL
Sbjct: 19  MGNRGGFRGGFGSGIRGRGRGRGRGRGRGRGARGGKAEDKEWMPVTKLGRLVKDMKIKSL 78

Query: 61  EQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVG 120
           E+IYL SLPIKE +I+D  +G SLKDEV+KIMPVQKQTRAGQRTRFKAFV +GD NGHVG
Sbjct: 79  EEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG 138

Query: 121 LGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPA 180
           LGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VR++PA
Sbjct: 139 LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPA 198

Query: 181 PRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRE 240
           PRG GIV+A VPKK+L  AGIDD +TS+RG T TLGNF KATFD + KTY +LTP+ W+E
Sbjct: 199 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 258

Query: 241 TRFTKSPFQEHTDLLAK 256
           T FTKSP+QE TD L K
Sbjct: 259 TVFTKSPYQEFTDHLVK 275

[Close]

BLAST of Sed0022560 vs. ExPASy TrEMBL
Match: A0A6J1HTA3 (40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467257 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.1e-145
Identity = 266/271 (98.15%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETR 240

Query: 241 FTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           FTKSPFQEHTDLLAKPT KALLLDDAERVNA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of Sed0022560 vs. ExPASy TrEMBL
Match: A0A6J1EPL6 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111435482 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.1e-145
Identity = 266/271 (98.15%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETR 240

Query: 241 FTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           FTKSPFQEHTDLLAKPT KALLLDDAERVNA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of Sed0022560 vs. ExPASy TrEMBL
Match: A0A6J1EBD7 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111432496 PE=3 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.0e-143
Identity = 266/272 (97.79%), Postives = 269/272 (98.90%), Query Frame = 0


Query: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGL 120
           QIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           RFTKSPFQEHTDLLAKPT KALLLDDAERVNA
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 272

[Close]

BLAST of Sed0022560 vs. ExPASy TrEMBL
Match: A0A5A7ULX0 (40S ribosomal protein S2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00150 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143
Identity = 264/271 (97.42%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           FTKSPFQEHTDLLAKPT KALLL+DAERV A
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of Sed0022560 vs. ExPASy TrEMBL
Match: A0A1S3CCQ1 (40S ribosomal protein S2-4-like OS=Cucumis melo OX=3656 GN=LOC103499519 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143
Identity = 264/271 (97.42%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRG+IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTAKALLLDDAERVNA 272
           FTKSPFQEHTDLLAKPT KALLL+DAERV A
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of Sed0022560 vs. TAIR 10
Match: AT3G57490.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 452.6 bits (1163), Expect = 2.2e-127
Identity = 231/256 (90.23%), Postives = 242/256 (94.53%), Query Frame = 0


Query: 3   ERGGDRGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERGGDRG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQ
Sbjct: 7   ERGGDRGDFGRGFGGRGGGRGGPRGRG-RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQ 66

Query: 63  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 122
           IYLHSLP+KE+QI+D LVGPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGDSNGHVGLG
Sbjct: 67  IYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLG 126

Query: 123 VKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRGAIILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 127 VKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 186

Query: 183 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 187 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 246

Query: 243 FTKSPFQEHTDLLAKP 257
           F+KSP+QEHTD L  P
Sbjct: 247 FSKSPYQEHTDFLLIP 261

[Close]

BLAST of Sed0022560 vs. TAIR 10
Match: AT2G41840.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-123
Identity = 223/258 (86.43%), Postives = 237/258 (91.86%), Query Frame = 0


Query: 3   ERGGDRGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQ 62
           ERGG+RG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKLGRLV  G I+
Sbjct: 11  ERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIK 70

Query: 63  SLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGH 122
            +EQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGH
Sbjct: 71  QIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH 130

Query: 123 VGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 182
           VGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 131 VGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 190

Query: 183 PAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW 242
           PAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW
Sbjct: 191 PAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFW 250

Query: 243 RETRFTKSPFQEHTDLLA 255
           +ETRF++SP+QEHTD LA
Sbjct: 251 KETRFSRSPYQEHTDFLA 268

[Close]

BLAST of Sed0022560 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.6 bits (1124), Expect = 7.4e-123
Identity = 226/265 (85.28%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 2   AERGGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNG 121
             LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTAKA 261
           W+ETRF++SP+QEHTD L+     A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of Sed0022560 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.6 bits (1124), Expect = 7.4e-123
Identity = 226/265 (85.28%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 2   AERGGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNG 121
             LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTAKA 261
           W+ETRF++SP+QEHTD L+     A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of Sed0022560 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.6 bits (1124), Expect = 7.4e-123
Identity = 226/265 (85.28%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 2   AERGGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNG 121
             LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTAKA 261
           W+ETRF++SP+QEHTD L+     A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

The following BLAST results are available for this feature:

BLAST of Sed0022560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928633.1	8.5e-145	98.15	40S ribosomal protein S2-4-like [Cucurbita moschata] >XP_022967881.1 40S ribosom...	[more]
XP_022925174.1	2.1e-143	97.79	40S ribosomal protein S2-4-like [Cucurbita moschata] >KAG6595664.1 40S ribosomal...	[more]
XP_038882736.1	2.1e-143	97.78	40S ribosomal protein S2-4-like [Benincasa hispida]	[more]
XP_008460763.1	2.7e-143	97.42	PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo] >KAA0056140.1 40S ribo...	[more]
XP_022966425.1	4.6e-143	97.79	40S ribosomal protein S2-4-like [Cucurbita maxima]	[more]

BLAST of Sed0022560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCM3	3.1e-126	90.23	40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1	[more]
P49688	2.8e-122	86.43	40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2	[more]
Q8L8Y0	1.0e-121	85.28	40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2	[more]
Q93VB8	1.0e-121	85.28	40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1	[more]
P15880	3.7e-103	74.32	40S ribosomal protein S2 OS=Homo sapiens OX=9606 GN=RPS2 PE=1 SV=2	[more]

BLAST of Sed0022560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTA3	4.1e-145	98.15	40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467257 PE=3...	[more]
A0A6J1EPL6	4.1e-145	98.15	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111435482 PE...	[more]
A0A6J1EBD7	1.0e-143	97.79	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111432496 PE...	[more]
A0A5A7ULX0	1.3e-143	97.42	40S ribosomal protein S2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CCQ1	1.3e-143	97.42	40S ribosomal protein S2-4-like OS=Cucumis melo OX=3656 GN=LOC103499519 PE=3 SV=...	[more]

BLAST of Sed0022560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57490.1	2.2e-127	90.23	Ribosomal protein S5 family protein	[more]
AT2G41840.1	2.0e-123	86.43	Ribosomal protein S5 family protein	[more]
AT1G58983.1	7.4e-123	85.28	Ribosomal protein S5 family protein	[more]
AT1G59359.1	7.4e-123	85.28	Ribosomal protein S5 family protein	[more]
AT1G58380.1	7.4e-123	85.28	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 82..146 e-value: 4.0E-30 score: 103.6
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 82..145 score: 23.122528
None	No IPR available	GENE3D	3.30.160.20		coord: 39..144 e-value: 1.1E-56 score: 191.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR13718:SF101	40S RIBOSOMAL PROTEIN S2-1-RELATED	coord: 1..268
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 78..147
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 145..238 e-value: 1.0E-50 score: 171.8
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAM	TIGR01020	TIGR01020	coord: 35..242 e-value: 4.8E-95 score: 314.9
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 165..231 e-value: 9.3E-24 score: 82.7
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 1..268
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 99..131
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 158..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022560.1	Sed0022560.1	mRNA
Sed0022560.2	Sed0022560.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding