Sed0022486 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTGCGATTCCGGCGGTGCTGACGGCGGCGACGCGGTGGCGCTGGGCGTCGTTTTGTGATTGTTCTTCAATTACGACGATCACAATTCGAAAACTAGAAGAAGAAGAACAGCACCTACAACAATGGCGTATAGGAGGAGACAAGGAATTACGAGGGCTTCCACATTCAAAGAAGAGATCCATCATCCTTCCGACGAGTTCGATCACAATTCCCCGCCTTCTTCTACTGCTTCTCTCTCTCAGGCGATCCCAGCTTCTGCTGCTAATCGCGATTCTTCGCATTCCTCTGCCTATGGCCATATCCGATCCAAGGTGCTCTGTTTGTTCTCTTTCTTTGATTTTCTGTTTTTTTTTTTTTTAACTCTACAATGATGAATCGATCGATTTAGGTTTTTGTTTGATTGATTTGATTGAGGTAATGAATCGTGAATTCCGTGAAATCTCTGATTTGGTTATGTCTGTTGTTATACCTTCGTCGTTGAATTGAATTAGGTTATGGAGATAAATGTTATTTGTTGAGTATTGAATTCATCAGAGGAGGTGATTGATTGATATGCTTGGTTACATATCATCGGAGTTCGATTTTACATGAACTCTCATGTTTTTTTAGCAAAATGTTGCGAATTCTATTCGTCAAATATGATTATATCGGAAAATTAAGACGGCCTGTTCTTTTTAATGTATGTTTAGTTACCTTTCCAAATGGAAAAAATGATGATATGCTTATGAATTTTACAGTGGGATAATGAATTCCGTGTAATCTCTGATTTGATTGTCTGTTTCTATATCTCCATTGTTGAATTAAGTTATGCAGATGAATATTATTTGTTGAGTGTTGAATTCTTCAGAGGAGGTGATTGATTAATTTGGTGAGCTTGATTTAGCAAATGTTGCGAATTCTGTTAGTCAAGATATCGGGAAATTTCGCCTGTGAAGCACGGACACTTCAAAATAGGGAAAGAATCCGCATTTTTCGGATACTTCTGGAATATATGTCCGACACGCCATTTTATGTCTCATTATTTATTATTTACAAAAAAAAAAGGAAAATTAACATATCAGTGTCCTAATTAACCTGTCGTTGTCTCGTGTCCGTGTCTGTGCTTCATAGAATTTAGACGGTCTGTTCTTTTCTATTTGTTTTTTAGTTACATTTCCAATTGGAAGATTGATGATATACTTGTTGGTGGTGGTTCATTGCTGTGTTCGAATTCTTCAGCAAACTCTGTTGTATTTTGTTGGTCATTTGAATGAATAATGCTTTGTAATCTGTATATCTTATGGTATCCTTTGATATACAGAGTTTTGCTGGCGAGAATGTGTCATTCAAAAGTGAATCGAAATCTGGATTTTGGGGGGTACTGGCTCGGAAAGCCCAGGCCATTCTCGAAGAAGATAACATAGCCATAGAAGATGAAACAAGTAGGTTTCAGCCCATTAATAGCTCAACCCGTAGCCAGGTGAACATGAACTATCTGTCATCGATATTATACATGGATATAAGCACAAATTGTTGGGACAAAATTTTACATTCTAATTGTATGCATACAGATTTTCAGATTTGAAACTGCTCCATCTTTCCTTTTTTTGTTCCAATCATGTTTTATGTATATGCCACATTGGTAGCCACCTACCTTGAAAATACTTTCCTACGAGTTTCCTGAACATTCAAATGTTGTCGGGTTAGGTGGTATCATAATATGTCTCGTGAGAATAGTCAGTGCAAACGTATGTGAGCCTTGATACTCATGGATATCAAAAAAATAATGTATATGTCACACAATACAATAGGATACTGTATTAGAGTGACTTCATAGATTTGAATCCTCGCCCCTAAAATAGTAAAATTTAACCATTAACTCAAGCCGTATGCAACTTGTATGATCCTAGTGCTATATTTTTTTTTTAATTTTTGTATTCTGCTTGAGAATTGGTTTCAGGAGCCATGTCAGTCTACTGATTACAACTCGAAGAAAACAGACAATCCTGCAACAAGAAAGGGTTTGGATACAATCACAACTTCACTTAATCAAATTGGGGACACATTTGAAAAGGCGTCTGAGGTAAGAAATGTGACATTTTTTTCTCACGTTAAACATATTATTGATTGGTTTTATTGTATTCTCATATCTTGTTTCTTCTAATCTTCAAGTTAGCTTGTTAATTTGCTAATTAGCTGACCATTTCTTACACTTCAAAATATAGATTAATTGTATTTCAACCTGATTTTATTTTGCAAGTTCGTGAGATAAATAGAATATCTCGAGAACCCCATCTCAGTCATCTATTTGCATAGATTAATTTCACTTCCATGGATGTTGCCAAGCCTGATTTTAAAGTCGAAACTCCATTAAAGAATATCATGTACTTGGTTGGTTTATTAGTGAACGGACATTCTAAACTAGTTTAGTTTCAACATCTTATCTTCTTTACAGGAAGGTCGCACAATTGCGAAAACTAAAACTGCAGATATCATTCAAGAAACTCGCAAACTGCAGATTACGAAAAAGAGCAACAACTCGAACAATATGCTGTTTCTAGAACCACAGATGCAAATACATCAAGAAACACAACTGAAGGCTTCTCGAGACGTAAGGTGCTAACTTTTTAATTATGTATTGTAATGCTACTATTAAAGTTTTTCTCTCTGTTCCCTCTTTTTTCTGTCACGGATTGAAGTTAAATTGGTAGAAATTCAGTCTTTTTTAAGTTAAGTTTACTCTGCCGAAGCAGCCTGGCTTACACATTTTTCTTCACAGCTTAATACAAAGCTCTATAATCCTGCAAAAGGAATTGAAAACGCCAATATGTCTGTCCTCAGAATGCAATTATTTTTATTTATTTTTATATCCATGACTGTTTAGGTCAGTTTGTATGCACCTCGACTAATGTTATTGAACATACTGCATGATCCTAGGTAGGTGGCCACTATAGACTGAACTCATCGCCTTAAGCACCTGAAGACCCTCTTTAACCACTAGGCCACTCCATGATGGTTAGTTAGAATGCAATGAACGAAGTTGAAGTTGTTTCCTAGCTGGAGATTTTCAATGTAGAAGTCATCAATTACAATTAGATATTGAACCATCTTTTTTAGTAGGATTCAATTTGGCTGTTTTATTTTACTCACACTTGCTCTAACTTTTGTAAAATAAAATTACCTTTGAGAGCACCAATGGCATAACAAGGATAAAATTACATGTGAACTGTAGGTTGCAATGGCAACAGCTGCTAAAGCCAAATTACTACTTCGAGAACTGAAAACCGTTAAAGCAGATCTGACTTTTGCTAAAGAAAGATGTACACAATTAGAGGAAGAAAACAAAATTCTCAGGGAAAATCGCGACAAAGGAGCTCATCGAGCAGATGATGACTTGGTATTATTACTTCCCTCTTTCTGTTCCTGTCATAATCTGTAGTAACTTATTCACATTTCTTTGGATCATTATAAGATTTCATTGTTTTTTTCAATGCAACCTTCCCAAGGAATAGATGTCAATTATCACTAGGATCTCTAGTACCAGAACATCAATAGTAACATATTCACATTTCTTTGGATGACTATAAGATTTAACTGTATTTTTTGGAATACAATAAATGTGGAGTATAGAGATTTGGTCCTCTAACCTTAATTACATGTCAACTATCACTAGGATCTTGAATACTAGAACATATCCATAGTAATGTATTCACATTTCTTTAGATCATTATAAGATTTAACTGTTTTTTTTATTAAATACAACAAAAGGCAAGTGAAGATTTAAACCTTAACTTTAAGAAGTACATGTCAATTATCACAAGAATCTTTAATAATAGAACATCAATAGTAACATATTCACTTTTTGGGGGGGCATTTTAAGAATTAGCTATGTTTGAAAGAACAATAAAAGTAGAGAGTATGAAGATTTGAACCTCTGAACTTAAACTAAGCCCCATTCTTTTACCAGATTTAACAGTTTGTATTGTAATGCTATATTCAAATCCAGATTCGGCTTCAACTCGAGACTCTTTTGGCTGAGAAGGCTCGTTTGGCGCACGAGAATGAGATATATGCTCGCGAGAACCGATTCCTAAGGGAAATTGTGGAGTACCACCAACTGACAATGCAGGATGTGGTTTACTTAGATGAAGGAATGGAAGAAGTTTCAGAAGTGTATCCCATATCTGTTTCCTCTCCAAAGATCACTAAAATGATTTCTAATTCTGTTGCCCCAACCTCGCCTTCAGCAGCAGCAGCAGCAGCCATGGAAGATCAAAAGAGTGGCAAAGAAGACAGTGATGGAGAGCTAAGCCCTACAAAAGTTCTTGAGGAAGAACAAGGTACACAAAAATCCCATTTTCCTTCTAATTCTTCTTGA GTTGCGATTCCGGCGGTGCTGACGGCGGCGACGCGGTGGCGCTGGGCGTCGTTTTGTGATTGTTCTTCAATTACGACGATCACAATTCGAAAACTAGAAGAAGAAGAACAGCACCTACAACAATGGCGTATAGGAGGAGACAAGGAATTACGAGGGCTTCCACATTCAAAGAAGAGATCCATCATCCTTCCGACGAGTTCGATCACAATTCCCCGCCTTCTTCTACTGCTTCTCTCTCTCAGGCGATCCCAGCTTCTGCTGCTAATCGCGATTCTTCGCATTCCTCTGCCTATGGCCATATCCGATCCAAGAGTTTTGCTGGCGAGAATGTGTCATTCAAAAGTGAATCGAAATCTGGATTTTGGGGGGTACTGGCTCGGAAAGCCCAGGCCATTCTCGAAGAAGATAACATAGCCATAGAAGATGAAACAAGTAGGTTTCAGCCCATTAATAGCTCAACCCGTAGCCAGGAGCCATGTCAGTCTACTGATTACAACTCGAAGAAAACAGACAATCCTGCAACAAGAAAGGGTTTGGATACAATCACAACTTCACTTAATCAAATTGGGGACACATTTGAAAAGGCGTCTGAGGAAGGTCGCACAATTGCGAAAACTAAAACTGCAGATATCATTCAAGAAACTCGCAAACTGCAGATTACGAAAAAGAGCAACAACTCGAACAATATGCTGTTTCTAGAACCACAGATGCAAATACATCAAGAAACACAACTGAAGGCTTCTCGAGACGTTGCAATGGCAACAGCTGCTAAAGCCAAATTACTACTTCGAGAACTGAAAACCGTTAAAGCAGATCTGACTTTTGCTAAAGAAAGATGTACACAATTAGAGGAAGAAAACAAAATTCTCAGGGAAAATCGCGACAAAGGAGCTCATCGAGCAGATGATGACTTGATTCGGCTTCAACTCGAGACTCTTTTGGCTGAGAAGGCTCGTTTGGCGCACGAGAATGAGATATATGCTCGCGAGAACCGATTCCTAAGGGAAATTGTGGAGTACCACCAACTGACAATGCAGGATGTGGTTTACTTAGATGAAGGAATGGAAGAAGTTTCAGAAGTGTATCCCATATCTGTTTCCTCTCCAAAGATCACTAAAATGATTTCTAATTCTGTTGCCCCAACCTCGCCTTCAGCAGCAGCAGCAGCAGCCATGGAAGATCAAAAGAGTGGCAAAGAAGACAGTGATGGAGAGCTAAGCCCTACAAAAGTTCTTGAGGAAGAACAAGGTACACAAAAATCCCATTTTCCTTCTAATTCTTCTTGA ATGGCGTATAGGAGGAGACAAGGAATTACGAGGGCTTCCACATTCAAAGAAGAGATCCATCATCCTTCCGACGAGTTCGATCACAATTCCCCGCCTTCTTCTACTGCTTCTCTCTCTCAGGCGATCCCAGCTTCTGCTGCTAATCGCGATTCTTCGCATTCCTCTGCCTATGGCCATATCCGATCCAAGAGTTTTGCTGGCGAGAATGTGTCATTCAAAAGTGAATCGAAATCTGGATTTTGGGGGGTACTGGCTCGGAAAGCCCAGGCCATTCTCGAAGAAGATAACATAGCCATAGAAGATGAAACAAGTAGGTTTCAGCCCATTAATAGCTCAACCCGTAGCCAGGAGCCATGTCAGTCTACTGATTACAACTCGAAGAAAACAGACAATCCTGCAACAAGAAAGGGTTTGGATACAATCACAACTTCACTTAATCAAATTGGGGACACATTTGAAAAGGCGTCTGAGGAAGGTCGCACAATTGCGAAAACTAAAACTGCAGATATCATTCAAGAAACTCGCAAACTGCAGATTACGAAAAAGAGCAACAACTCGAACAATATGCTGTTTCTAGAACCACAGATGCAAATACATCAAGAAACACAACTGAAGGCTTCTCGAGACGTTGCAATGGCAACAGCTGCTAAAGCCAAATTACTACTTCGAGAACTGAAAACCGTTAAAGCAGATCTGACTTTTGCTAAAGAAAGATGTACACAATTAGAGGAAGAAAACAAAATTCTCAGGGAAAATCGCGACAAAGGAGCTCATCGAGCAGATGATGACTTGATTCGGCTTCAACTCGAGACTCTTTTGGCTGAGAAGGCTCGTTTGGCGCACGAGAATGAGATATATGCTCGCGAGAACCGATTCCTAAGGGAAATTGTGGAGTACCACCAACTGACAATGCAGGATGTGGTTTACTTAGATGAAGGAATGGAAGAAGTTTCAGAAGTGTATCCCATATCTGTTTCCTCTCCAAAGATCACTAAAATGATTTCTAATTCTGTTGCCCCAACCTCGCCTTCAGCAGCAGCAGCAGCAGCCATGGAAGATCAAAAGAGTGGCAAAGAAGACAGTGATGGAGAGCTAAGCCCTACAAAAGTTCTTGAGGAAGAACAAGGTACACAAAAATCCCATTTTCCTTCTAATTCTTCTTGA MAYRRRQGITRASTFKEEIHHPSDEFDHNSPPSSTASLSQAIPASAANRDSSHSSAYGHIRSKSFAGENVSFKSESKSGFWGVLARKAQAILEEDNIAIEDETSRFQPINSSTRSQEPCQSTDYNSKKTDNPATRKGLDTITTSLNQIGDTFEKASEEGRTIAKTKTADIIQETRKLQITKKSNNSNNMLFLEPQMQIHQETQLKASRDVAMATAAKAKLLLRELKTVKADLTFAKERCTQLEEENKILRENRDKGAHRADDDLIRLQLETLLAEKARLAHENEIYARENRFLREIVEYHQLTMQDVVYLDEGMEEVSEVYPISVSSPKITKMISNSVAPTSPSAAAAAAMEDQKSGKEDSDGELSPTKVLEEEQGTQKSHFPSNSS Homology
BLAST of Sed0022486 vs. NCBI nr
Match: XP_038882986.1 (uncharacterized protein LOC120074073 [Benincasa hispida] >XP_038883017.1 uncharacterized protein LOC120074094 [Benincasa hispida]) HSP 1 Score: 512.3 bits (1318), Expect = 3.6e-141 Identity = 307/428 (71.73%), Postives = 340/428 (79.44%), Query Frame = 0
BLAST of Sed0022486 vs. NCBI nr
Match: XP_011653735.2 (uncharacterized protein LOC101205031 isoform X1 [Cucumis sativus] >KAE8649597.1 hypothetical protein Csa_012760 [Cucumis sativus]) HSP 1 Score: 505.0 bits (1299), Expect = 5.8e-139 Identity = 300/433 (69.28%), Postives = 335/433 (77.37%), Query Frame = 0
BLAST of Sed0022486 vs. NCBI nr
Match: XP_022950505.1 (uncharacterized protein LOC111453596 [Cucurbita moschata]) HSP 1 Score: 505.0 bits (1299), Expect = 5.8e-139 Identity = 297/429 (69.23%), Postives = 339/429 (79.02%), Query Frame = 0
BLAST of Sed0022486 vs. NCBI nr
Match: XP_022978186.1 (uncharacterized protein LOC111478244 [Cucurbita maxima]) HSP 1 Score: 498.4 bits (1282), Expect = 5.4e-137 Identity = 296/432 (68.52%), Postives = 337/432 (78.01%), Query Frame = 0
BLAST of Sed0022486 vs. NCBI nr
Match: XP_008463299.1 (PREDICTED: uncharacterized protein LOC103501490 isoform X1 [Cucumis melo] >TYK06210.1 actin cytoskeleton-regulatory complex protein pan1 [Cucumis melo var. makuwa]) HSP 1 Score: 497.7 bits (1280), Expect = 9.3e-137 Identity = 298/432 (68.98%), Postives = 331/432 (76.62%), Query Frame = 0
BLAST of Sed0022486 vs. ExPASy TrEMBL
Match: A0A0A0KXX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337320 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 2.8e-139 Identity = 300/433 (69.28%), Postives = 335/433 (77.37%), Query Frame = 0
BLAST of Sed0022486 vs. ExPASy TrEMBL
Match: A0A6J1GFX8 (uncharacterized protein LOC111453596 OS=Cucurbita moschata OX=3662 GN=LOC111453596 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 2.8e-139 Identity = 297/429 (69.23%), Postives = 339/429 (79.02%), Query Frame = 0
BLAST of Sed0022486 vs. ExPASy TrEMBL
Match: A0A6J1IM16 (uncharacterized protein LOC111478244 OS=Cucurbita maxima OX=3661 GN=LOC111478244 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 2.6e-137 Identity = 296/432 (68.52%), Postives = 337/432 (78.01%), Query Frame = 0
BLAST of Sed0022486 vs. ExPASy TrEMBL
Match: A0A5D3C4F3 (Actin cytoskeleton-regulatory complex protein pan1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00700 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 4.5e-137 Identity = 298/432 (68.98%), Postives = 331/432 (76.62%), Query Frame = 0
BLAST of Sed0022486 vs. ExPASy TrEMBL
Match: A0A1S3CJA7 (uncharacterized protein LOC103501490 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501490 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 4.5e-137 Identity = 298/432 (68.98%), Postives = 331/432 (76.62%), Query Frame = 0
BLAST of Sed0022486 vs. TAIR 10
Match: AT5G01970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). ) HSP 1 Score: 291.2 bits (744), Expect = 1.2e-78 Identity = 201/383 (52.48%), Postives = 247/383 (64.49%), Query Frame = 0
BLAST of Sed0022486 vs. TAIR 10
Match: AT1G30050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 246 Blast hits to 244 proteins in 61 species: Archae - 0; Bacteria - 8; Metazoa - 78; Fungi - 10; Plants - 117; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). ) HSP 1 Score: 283.9 bits (725), Expect = 2.0e-76 Identity = 193/357 (54.06%), Postives = 240/357 (67.23%), Query Frame = 0
BLAST of Sed0022486 vs. TAIR 10
Match: AT2G30530.1 (unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink). ) HSP 1 Score: 256.9 bits (655), Expect = 2.6e-68 Identity = 176/335 (52.54%), Postives = 217/335 (64.78%), Query Frame = 0
BLAST of Sed0022486 vs. TAIR 10
Match: AT4G02800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 2.4e-26 Identity = 93/313 (29.71%), Postives = 158/313 (50.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|