Sed0022274 (gene) Chayote v1

Overview


Name	Sed0022274
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Proteinase inhibitor
Location	LG01: 65075579 .. 65077369 (-)
RNA-Seq Expression	Sed0022274
Synteny	Sed0022274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGATTTGGAACACCATGAAGCCAGATTAACTTTAATGGATTCCCAAATAAAGTCAGGTGACTTATTGATGTAGTTAGATTCAAAAAGTCTTGCATTTCTTTCCTTCCAAATGTTCCACCAAGTAGCAGCATAGTAACATGCCATCAATATCTCCTTTTGAGAGCCAAGATTGGCATCCAAGTTAGCTTTGATGAAAGCAGCCACCGAAATAGAAGGAGCCTGTTGGCATTGGGAAGGAAGTTTCAGCAGAATTTTTTTAATGTAGCAGCAGCTGGAGAATAAGTGCTCTATTGTTTCATTATCCCTGTTACATAGACCACACCAACTCGGACTCAAAAAATGGTTAGGCCTCCTTCTTTGCATAGTGTCAGCAGTGTTAAGCCCTTTGTTATAGAGTGTCCAAATAAACACCTTAATATTTTTCGGGATCACAGATTTCCAGAAAATATTTGAAAGGGGGCTTTCAATTAGGCCATGTTGATCTGCAGCAATCATATGTTTTAGAGAGTTTACCGTGAAACTTTTGTTGCTCGCCGGGCTCCACAATATGTGGTCCTCGCCTGTATTGGTCAAAGGCGGAGGCCATAAAGCTGTAAGCTCGTTCCACCTAATTACCAAGAAGTTAGAAATCTAAATCTAAAAATAAATAAATATACTTTGCATCTTGATCTTTGCTAATTTAATTTTTTTGAGGTTGATGCGGTTCTTGTTCTTTTTACAAATGTATATATGTGTTTTCTTATAATAACTCAAGATATAAATATGTATTTTTTGAGAAGTAAAATTTATGGGCTGTTAAAACTCTGAAGATTGTGTGTGTGTGTTTTTTTAGTTTCTCTAAAAAATGTGGTTCAAGTTAAAAGTTGTAGGTTCAAATTTTCCAAACTACAAATATTATTGCTTTGTACTAACCTTTTAACTGACTTAAAATATGTATTGCCATTGATGAAAATTTATTATTATTTGAAACTGGGGGATTTTGAGCTCGTTATCTTGATTACTAGATTATAAATTATGTCACGAAAGTTATGTTTTTAATTTTCTTATCCAACAAAATAAAACGTAGTTTCTTTGTCATGGAATGATGAGCATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTAACCGATCGAGCAGGTTAAACAAACATCGGTCAACATAACTTTATATTATCATTAATTTATTCGGATTATTCCCAAGAGAACCAATTGATTTATTTATTTATTAAACTCTAAAAGCCACGAACAAGTTTGCTATAAATATAGCAACTTAACAAACAACACAAAACCATCCCTTCTTTAATTCCACTTTAAACCAATACAGATATCATTTCCAAGATGACCCGTAAGTACAATTTCTGATTTTATTTTTATTGAGCCAATTTCTGATTTTTTTTTTTTTTTCTTTTTTTAGTTCTACAATAATTATGGTCGGAGAGATTCGAACCAAAGACATCTAGGTCATTAAATTTACACTAATATTGCTGACCTATTACTCTTATTGGTTACTGTTTTTTATTCTCTATCTTCCCTTCTATATAAATTTTAATTTTTAAGCTCTAATATATTAATTTTTGTACGCATGATTTTAGGAAAATCATGGCCTGAGCTTGTATTTGTGAATGCTACCACAGCAACCAATTACATATTGAAATCGAATCCTGGGTTGCATATAGTTGTGGTGTTAGCAGGAAGTCCAGTAACAGCAGACCTAAGGGAAGATCGAGTTCGACTTATCGTTAATATCAACAATTATGTTGTTGTAATTCCTGTTGTTGGTTAA

mRNA sequence

ATGGGAGATTTGGAACACCATGAAGCCAGATTAACTTTAATGGATTCCCAAATAAAGTCAGGAAAATCATGGCCTGAGCTTGTATTTGTGAATGCTACCACAGCAACCAATTACATATTGAAATCGAATCCTGGGTTGCATATAGTTGTGGTGTTAGCAGGAAGTCCAGTAACAGCAGACCTAAGGGAAGATCGAGTTCGACTTATCGTTAATATCAACAATTATGTTGTTGTAATTCCTGTTGTTGGTTAA

Coding sequence (CDS)

ATGGGAGATTTGGAACACCATGAAGCCAGATTAACTTTAATGGATTCCCAAATAAAGTCAGGAAAATCATGGCCTGAGCTTGTATTTGTGAATGCTACCACAGCAACCAATTACATATTGAAATCGAATCCTGGGTTGCATATAGTTGTGGTGTTAGCAGGAAGTCCAGTAACAGCAGACCTAAGGGAAGATCGAGTTCGACTTATCGTTAATATCAACAATTATGTTGTTGTAATTCCTGTTGTTGGTTAA

Protein sequence

MGDLEHHEARLTLMDSQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNYVVVIPVVG

Homology

[Close]

BLAST of Sed0022274 vs. NCBI nr
Match: XP_011654473.1 (inhibitor of trypsin and hageman factor [Cucumis sativus] >KGN49621.1 hypothetical protein Csa_018430 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 20 SGK-SWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNYVVV 79
          SGK SWPELVFV ++ A ++I +  P +  VV+LAGSPVT DLR +RVR+ VN+N+ VV 
Sbjct: 11 SGKSSWPELVFVKSSVAVHWIERDRPDVKPVVLLAGSPVTEDLRPNRVRIFVNMNDRVVE 70

Query: 80 IPVVG 84
          +P  G
Sbjct: 71 VPRTG 75

[Close]

BLAST of Sed0022274 vs. NCBI nr
Match: KGN60477.1 (hypothetical protein Csa_001998 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-07
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 22 KSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNYVVVIPV 81
          KSWP L F++A T  N I K NP   I ++LAGSPVT DL+  RVRL  N+   VV++P 
Sbjct: 10 KSWPALNFMDARTVANIIKKENPDFQIFILLAGSPVTKDLKHGRVRLFTNMEEIVVIVPQ 69

Query: 82 VG 84
           G
Sbjct: 70 EG 71

[Close]

BLAST of Sed0022274 vs. NCBI nr
Match: KAG6571807.1 (hypothetical protein SDJN03_28535, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 22 KSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNYVVVIPV 81
          KSWPEL  + A+T  N I + +P   IV++LAGSPVT DL+  RVRL VNI   VV IP 
Sbjct: 6  KSWPELNLMQASTVENIIKRQHPEFQIVILLAGSPVTKDLKHGRVRLFVNILGIVVEIPR 65

Query: 82 VG 84
           G
Sbjct: 66 EG 67

[Close]

BLAST of Sed0022274 vs. NCBI nr
Match: CAG7908177.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 16 SQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNY 75
          SQ+    SWPELV  N   A + I + N  +  VV+L GSPVTAD+R DRVR+ VN N  
Sbjct: 12 SQVAGKNSWPELVGTNGDYAASVIERENSRVDAVVILQGSPVTADVRCDRVRVWVNRNRI 71

Query: 76 VVVIPVVG 84
          VV +P+ G
Sbjct: 72 VVHVPIAG 79

[Close]

BLAST of Sed0022274 vs. NCBI nr
Match: GAY33543.1 (hypothetical protein CUMW_281900 [Citrus unshiu])

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 16  SQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNY 75
           +Q +  +SWPELV VN   A   I K NP +H +++L G+PVT D R DRVR++V     
Sbjct: 50  TQFEQERSWPELVGVNGEIAAARIQKENPNVHAIIILEGTPVTQDFRCDRVRVVVEKYEK 109

Query: 76  VVVIPVVG 84
           VV +P +G
Sbjct: 110 VVQVPRIG 117

[Close]

BLAST of Sed0022274 vs. ExPASy Swiss-Prot
Match: P16231 (Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum OX=4082 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.0e-08
Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 15  DSQIKSGKSWPELVFVNATTATNYILKSNPGL-HIVVVLAGSPVTADLREDRVRLIVNIN 74
           DS+ K  + WPEL+ V A  A   I K NP + +I ++L GSPVT D R DRVRL VNI 
Sbjct: 42  DSRCKGKQFWPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNIL 101

Query: 75  NYVVVIPVV 83
             VV IP V
Sbjct: 102 GDVVQIPRV 110

[Close]

BLAST of Sed0022274 vs. ExPASy Swiss-Prot
Match: Q00783 (Proteinase inhibitor 1 OS=Solanum tuberosum OX=4113 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-07
Identity = 35/72 (48.61%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 13  LMDSQIKSGKSWPELVFVNATTATNYILKSNPGL-HIVVVLAGSPVTADLREDRVRLIVN 72
           L + Q K    WPEL+ V    A   I K N  + ++ ++L GSPVT D+R DRVRL  N
Sbjct: 36  LKEFQCKGKLRWPELIGVPTKLAKGIIEKENSLISNVHILLNGSPVTLDIRCDRVRLFDN 95

Query: 73  INNYVVVIPVVG 84
           I  YVV IPVVG
Sbjct: 96  ILGYVVDIPVVG 107

[Close]

BLAST of Sed0022274 vs. ExPASy Swiss-Prot
Match: Q02214 (Trypsin inhibitor 1 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-06
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 22 KSWPELVFVNATTATNYILKSNPGL-HIVVVLAGSPVTADLREDRVRLIVNINNYVVVIP 81
          ++WPEL+ V A  A   I K N  L ++  VL GSPVT D R +RVRL VN+ ++VV IP
Sbjct: 32 ETWPELIGVPAKFAREIIQKENSKLTNVPSVLNGSPVTKDFRCERVRLFVNVLDFVVQIP 91

Query: 82 VVG 84
           VG
Sbjct: 92 RVG 94

[Close]

BLAST of Sed0022274 vs. ExPASy Swiss-Prot
Match: Q03199 (Proteinase inhibitor I-B OS=Nicotiana tabacum OX=4097 GN=TIMPA PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-06
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 24  WPELVFVNATTATNYILKSNPGL-HIVVVLAGSPVTADLREDRVRLIVNINNYVVVIPVV 83
           WPEL+   A  A   I K NP L ++  VL G+PVT DLR +RVRL VN+ ++VV  P V
Sbjct: 47  WPELLGTPAKFAMQIIQKENPKLTNVQTVLNGTPVTEDLRCNRVRLFVNVLDFVVQTPQV 106

[Close]

BLAST of Sed0022274 vs. ExPASy Swiss-Prot
Match: P24076 (Glu S.griseus protease inhibitor OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.2e-06
Identity = 29/68 (42.65%), Postives = 37/68 (54.41%), Query Frame = 0


Query: 16 SQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNY 75
          SQ +  +SWP+LV      A   I + NP +  V+V  GSPVTAD R DRVR+ V     
Sbjct: 1  SQCQGKRSWPQLVGSTGAAAKAVIERENPRVRAVIVRVGSPVTADFRCDRVRVWVTERGI 60

Query: 76 VVVIPVVG 84
          V   P +G
Sbjct: 61 VARPPAIG 68

[Close]

BLAST of Sed0022274 vs. ExPASy TrEMBL
Match: A0A1J3I3T7 (Proteinase inhibitor OS=Noccaea caerulescens OX=107243 GN=LE_TR5681_c0_g1_i1_g.20823 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.5e-09
Identity = 39/70 (55.71%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 14 MDSQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNIN 73
          M SQ     +WPELV  N   AT+ I K N  +  VV+L GSPVTADLR DRVR+IVN  
Sbjct: 1  MSSQCPPKNAWPELVGKNGDYATSVIEKENRKVDAVVILDGSPVTADLRCDRVRVIVNSK 60

Query: 74 NYVVVIPVVG 84
          N VV +PV G
Sbjct: 61 NIVVRVPVAG 70

[Close]

BLAST of Sed0022274 vs. ExPASy TrEMBL
Match: A0A0A0KPI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G027950 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.5e-09
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 20 SGK-SWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNYVVV 79
          SGK SWPELVFV ++ A ++I +  P +  VV+LAGSPVT DLR +RVR+ VN+N+ VV 
Sbjct: 11 SGKSSWPELVFVKSSVAVHWIERDRPDVKPVVLLAGSPVTEDLRPNRVRIFVNMNDRVVE 70

Query: 80 IPVVG 84
          +P  G
Sbjct: 71 VPRTG 75

[Close]

BLAST of Sed0022274 vs. ExPASy TrEMBL
Match: A0A0A0LIF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914570 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.5e-08
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 22 KSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNYVVVIPV 81
          KSWP L F++A T  N I K NP   I ++LAGSPVT DL+  RVRL  N+   VV++P 
Sbjct: 10 KSWPALNFMDARTVANIIKKENPDFQIFILLAGSPVTKDLKHGRVRLFTNMEEIVVIVPQ 69

Query: 82 VG 84
           G
Sbjct: 70 EG 71

[Close]

BLAST of Sed0022274 vs. ExPASy TrEMBL
Match: A0A2H5MZU8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281900 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 16  SQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNINNY 75
           +Q +  +SWPELV VN   A   I K NP +H +++L G+PVT D R DRVR++V     
Sbjct: 50  TQFEQERSWPELVGVNGEIAAARIQKENPNVHAIIILEGTPVTQDFRCDRVRVVVEKYEK 109

Query: 76  VVVIPVVG 84
           VV +P +G
Sbjct: 110 VVQVPRIG 117

[Close]

BLAST of Sed0022274 vs. ExPASy TrEMBL
Match: A0A1J3DSG5 (Protease inhibitor HPI (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR19920_c3_g1_i1_g.66185 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07
Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 14 MDSQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNIN 73
          M SQ     +WPELV  N   A + I + N  +  VV+L GSPVTAD R DRVR+ VN N
Sbjct: 11 MSSQCHPKNAWPELVGKNGDYAASVIERENTRVDAVVILDGSPVTADFRCDRVRVFVNSN 70

Query: 74 NYVVVIPVVG 84
            VV +PV G
Sbjct: 71 RIVVKVPVAG 80

[Close]

BLAST of Sed0022274 vs. TAIR 10
Match: AT2G38870.1 (Serine protease inhibitor, potato inhibitor I-type family protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-08
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 14 MDSQIKSGKSWPELVFVNATTATNYILKSNPGLHIVVVLAGSPVTADLREDRVRLIVNIN 73
          M ++     SWPEL   N   A   I + NP ++  V+L GSPVTAD R DRVR+ V+ N
Sbjct: 1  MSTECPRKNSWPELTGTNGDYAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDGN 60

Query: 74 NYVVVIPVVG 84
            VV  P  G
Sbjct: 61 RIVVKTPKSG 70

The following BLAST results are available for this feature:

BLAST of Sed0022274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654473.1	1.7e-08	55.38	inhibitor of trypsin and hageman factor [Cucumis sativus] >KGN49621.1 hypothetic...	[more]
KGN60477.1	1.1e-07	51.61	hypothetical protein Csa_001998 [Cucumis sativus]	[more]
KAG6571807.1	4.3e-07	54.84	hypothetical protein SDJN03_28535, partial [Cucurbita argyrosperma subsp. sorori...	[more]
CAG7908177.1	4.3e-07	50.00	unnamed protein product [Brassica rapa]	[more]
GAY33543.1	4.3e-07	45.59	hypothetical protein CUMW_281900 [Citrus unshiu]	[more]

BLAST of Sed0022274 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P16231	4.0e-08	52.17	Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum OX=4082 PE=3 SV=1	[more]
Q00783	1.2e-07	48.61	Proteinase inhibitor 1 OS=Solanum tuberosum OX=4113 PE=3 SV=1	[more]
Q02214	1.0e-06	50.79	Trypsin inhibitor 1 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1	[more]
Q03199	1.7e-06	50.82	Proteinase inhibitor I-B OS=Nicotiana tabacum OX=4097 GN=TIMPA PE=2 SV=1	[more]
P24076	2.2e-06	42.65	Glu S.griseus protease inhibitor OS=Momordica charantia OX=3673 PE=1 SV=1	[more]

BLAST of Sed0022274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1J3I3T7	6.5e-09	55.71	Proteinase inhibitor OS=Noccaea caerulescens OX=107243 GN=LE_TR5681_c0_g1_i1_g.2...	[more]
A0A0A0KPI0	8.5e-09	55.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G027950 PE=3 SV=1	[more]
A0A0A0LIF6	5.5e-08	51.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914570 PE=3 SV=1	[more]
A0A2H5MZU8	2.1e-07	45.59	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281900 PE=3 SV=1	[more]
A0A1J3DSG5	2.7e-07	50.00	Protease inhibitor HPI (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR1992...	[more]

BLAST of Sed0022274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38870.1	1.9e-08	44.29	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRINTS	PR00292	POTATOINHBTR	coord: 23..36 score: 45.96 coord: 60..70 score: 56.52 coord: 48..59 score: 46.01
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 23..83 e-value: 3.5E-19 score: 69.2
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PANTHER	PTHR33091	PROTEIN, PUTATIVE, EXPRESSED-RELATED	coord: 22..83
None	No IPR available	GENE3D	3.30.10.10	Trypsin Inhibitor V, subunit A	coord: 15..83 e-value: 1.4E-19 score: 72.2
None	No IPR available	PANTHER	PTHR33091:SF83	ETHYLENE-RESPONSIVE PROTEINASE INHIBITOR 1	coord: 22..83
IPR036354	Proteinase inhibitor I13, potato inhibitor I superfamily	SUPERFAMILY	54654	CI-2 family of serine protease inhibitors	coord: 21..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022274.1	Sed0022274.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009611	response to wounding
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity