Sed0022238 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTCCCTCACTTCCTATTGGTCCAGTGTGGTCCCCACTCTGGGTCCCACTTCGTACCTACAGCCACGTGTCCTTTCTTTCTGCTTTTTTTAATTTTTGAATTAATTAATTCACCCGCACCGGAACTGTGTTTTGTTTTTTTTTTAGCAATGGCGATTCTCTCTGCCTTGAACAGAAACCCGGGTTTGTAGTTTCTCTTTGTTTGTACGGTCGATTATGGACGGTGGCGGAGAAGCGGCGCGTCGGATGATGATGAGATTCCGGCCGATCGCGCCGAAGCCGATCGCCGGCGGGGCCTCTGTTTCCGCCGCGCCGGCGATTTCGGTAGTGAGGACGAAGAGGAAGTACGTTAGGGTTGCGAGGTACAACAGGAAGAAGAAGATGAGGAGATCGAGGAAGACGACGCTGCAACTGCTGCCGGAGGTGTGGGTGACGGTGGACTGCGTGGCGGCGAGGGAGGAGGCGGTGGGGGAAGAGCTGGGGCGTACGGACGAGGAGAGGAAGAGGAATCTGGAGGAGGACACGTGTCCGGGGTTCGTATCGGACGGTGAGAATAGAGTGGAGTGGTTGAACAGGGCGTTTGTGCGGATGGTGAGGCGGAGGAGTGGCGGCGAGGGTGAGTCACCGGCGGTGAGGTTGGTGGTCGTGTCGGAGGCGGAAATGGGATTAGGGTTTACGTGTCGGATAAAGGTGGAGTTCAGAATTGGGGGAAGGGGAATGGTGAAATTGGTGCCGTGCGATGCGTGGAGAATGGACGGTGGAGGATTTGCATGGAAACTAGACGTCAAAGCTGCCCTCACTTTGGCTCCTTTGCTTCAAGATGATGATTTTCTGTAGAAAATGAAACGTCCGAAAATTGAGGTAATTATTTTTTTTATTTTTTTTTTGAGTACCTATTGAAGGAGGGGAACAAGTACCAATTCTGAAAATAGAAAATCATTGCAGCACTGACCTATTTGATAATTATTATTTATTTTGTTTGTTTGGTTGCACCCTATAATTTCCATGAAAGCTTCAAATGAAGCTGTTAGGACCTGTTTGGTTTGAGGGATTGATTTGGAATAAGATTTCAAATCCCCTAATAATACAACCAATCAAATCATTTCAAACCTCTCCAAGGATGATTTTTCAAATCTTTGGATTCCACCATTTTTTCAAACATTATTATTTTTTCTCTCTATTTTTTATACACATGGGTTAATATTTATTTATTTTTAATTAAAAAAATAATAATATAAATTTGATTACTATGAAATTAACAACGTTGGAATATTAATATAAGAAATTTGTAGTAAATAGTCCATTTTAGTATTCAACTTTTAATCAAATGGGACGATAGCACGATTGGTTATCAGGTTAGATGTTAATTTATTTTCATTCTTCCCTCTCTGGAATCGGTATTTGAAATCCTCCTCCCCAATTTGTACTAAAAATAAAAATAAAAATCAACTTTTAAAAAATATATTTCATATTCAAAATATAAAATATTTTATTTGTTTGAAAATTATTAATTTTACTTGATTGAAACTTGTCAATTTTGGGCTGTGATTGATTTGTTTTTATTATATTTAAATATTTTCTGATACTTTTAGATTTTTTTTTTGTGCTAATGAAAAATTACCAATAATATAAATGTTTAAATTTCCATTATTATAATAATTTTTAAATTATTATTCTAATATTAATTATTATGATGATAATTACTATTATAATCTTAATGAATATAAGTTATATAATTATTATCAAAAGATTTTTTTTTATAATAGTTTATATGGATTTATAATTTTTAGTCTTTAATAAGTATAATGTGTGAGATACATATTACATGTCATAAAAATCAATTAAAAATTAAATAACAAACATCTAAGATTTAAATATTTATATTATCAATTTCTCAAAAAAAAAATTATATTTTCAATTTATTAGTTTAAAAAGATTAATAATACACTTAATTATCTTGTAAATTAATTATTTTTATCTTGGACCTTAATTCCACCTTATCTCTGTAAAAAAGCATAAAAAATGACCATCTTCTCCTCTATAACTCGTTTGGGTGTAGTTTTTGTATAGAGGAGTTAGAGTCAAAACGTTGTTTGGATGTAGATTTAAAAATGAGTAGTTATTTTTAGTGGTTAAAAAAGAAATGATTAAGATCTAAAAAATGTAGGTGTATTTTTAGGATTTGATGTACTTTTTAAAAAAAAAACTGGGGAGCCTGTTTAAGGGTATAAGCTTTAGACATTATATTGAAATAATCACTTATCTACATCATGATAACCATTTTATTTTTTGTTTTTAAATTTTAAGCTTATTTTTATCCTAGTTTCCTACCACGTACTTCATCTTTCCTGCAAATGTATTTTTGGTTTTGAAATTTAAGCCTACAACAACTATCTTATCTATATTTTAAGAAACAAAACCAAAAATTGGAAAAAAAAAAAACTAATTTTCAAAAGTTTGTTTTTATTTTTGAAATTTGGTTAGAATTCACCAACTTTCTTAAGGAAAGATGGAGCACATACTGGAAAATTTGAGTAGAAATAGGCTTAAATTTTATAAACAAAAAACAAAAAACAAAATAGTCATCAAACGACCCCTAAAAAACAAAATAGTTATCAAACAATGTCTTAGTCTTTTCCTTTATTTATGTGTTTACACTATCAGCTAGCTAGCTTGAATTGTAAATCATATGGATACTTAAAAGTCAGCAAAAATCACAGTTTTAGAATCATGTATCGAGTGTTAATCGCTTTAAAATGTATGAATTTTTGTTATTTTAAAATTCAAGATCATGAGGATTATATTTTTATTTCTCAATTATAATACTGAACATATACATTTACATGAATATTTATGTTGTTGTTAAAGTAGAGGATGCAAAGGAAAAATTGCTTGATCTCCTTTGTTTGAAAAGGAATAATCTGGATATTGTTGTTCATCTTGAATTTAGAAGTCACATTGGGAATGATTTTGCAGGTCATAATTGAAGAAGGAGAAATGAAACTAAAGAGAGTTTCCCAGAGAAAGTACAATTAAATAGCTAAGTTATGTAATAATATGGCAGTTAGAATCTTATGATCATCAAGCAACCGGCCAACAAGAACAATAATTCAATCGCCATAAAGATGTACTCGTGACAAGAAGATCATAGGTTTGCTCCTATTGGTTATTAAACCAAAAAAACAGATATTTTATGGAATGATTGCTCAAATGCAAAGAAAGAAACTACTATAAAGTCAAGTTGCACTTATTGATAAAACTGGCACAAAATTGTAATATAAAGTTTTAATTAATGAGTGACTATGCAACAGGCCAAAATAATCTCCTTGGTTTCAATGTATAGGATATGAGCATATCATTTTCAGAATTTTCTTGCTCTCTCAACCCAATGTCAAAGAATAATGTTTATGGTTGATGAAAAGAAGTAAGAGTATTTAACA CACTCCCTCACTTCCTATTGGTCCAGTGTGGTCCCCACTCTGGGTCCCACTTCGTACCTACAGCCACGTGTCCTTTCTTTCTGCTTTTTTTAATTTTTGAATTAATTAATTCACCCGCACCGGAACTGTGTTTTGTTTTTTTTTTAGCAATGGCGATTCTCTCTGCCTTGAACAGAAACCCGGGTTTGTAGTTTCTCTTTGTTTGTACGGTCGATTATGGACGGTGGCGGAGAAGCGGCGCGTCGGATGATGATGAGATTCCGGCCGATCGCGCCGAAGCCGATCGCCGGCGGGGCCTCTGTTTCCGCCGCGCCGGCGATTTCGGTAGTGAGGACGAAGAGGAAGTACGTTAGGGTTGCGAGGTACAACAGGAAGAAGAAGATGAGGAGATCGAGGAAGACGACGCTGCAACTGCTGCCGGAGGTGTGGGTGACGGTGGACTGCGTGGCGGCGAGGGAGGAGGCGGTGGGGGAAGAGCTGGGGCGTACGGACGAGGAGAGGAAGAGGAATCTGGAGGAGGACACGTGTCCGGGGTTCGTATCGGACGGTGAGAATAGAGTGGAGTGGTTGAACAGGGCGTTTGTGCGGATGGTGAGGCGGAGGAGTGGCGGCGAGGGTGAGTCACCGGCGGTGAGGTTGGTGGTCGTGTCGGAGGCGGAAATGGGATTAGGGTTTACGTGTCGGATAAAGGTGGAGTTCAGAATTGGGGGAAGGGGAATGGTGAAATTGGTGCCGTGCGATGCGTGGAGAATGGACGGTGGAGGATTTGCATGGAAACTAGACGTCAAAGCTGCCCTCACTTTGGCTCCTTTGCTTCAAGATGATGATTTTCTGTAGAAAATGAAACGTCCGAAAATTGAGGTCATAATTGAAGAAGGAGAAATGAAACTAAAGAGAGTTTCCCAGAGAAAGTACAATTAAATAGCTAAGTTATGTAATAATATGGCAGTTAGAATCTTATGATCATCAAGCAACCGGCCAACAAGAACAATAATTCAATCGCCATAAAGATGTACTCGTGACAAGAAGATCATAGGTTTGCTCCTATTGGTTATTAAACCAAAAAAACAGATATTTTATGGAATGATTGCTCAAATGCAAAGAAAGAAACTACTATAAAGTCAAGTTGCACTTATTGATAAAACTGGCACAAAATTGTAATATAAAGTTTTAATTAATGAGTGACTATGCAACAGGCCAAAATAATCTCCTTGGTTTCAATGTATAGGATATGAGCATATCATTTTCAGAATTTTCTTGCTCTCTCAACCCAATGTCAAAGAATAATGTTTATGGTTGATGAAAAGAAGTAAGAGTATTTAACA ATGGACGGTGGCGGAGAAGCGGCGCGTCGGATGATGATGAGATTCCGGCCGATCGCGCCGAAGCCGATCGCCGGCGGGGCCTCTGTTTCCGCCGCGCCGGCGATTTCGGTAGTGAGGACGAAGAGGAAGTACGTTAGGGTTGCGAGGTACAACAGGAAGAAGAAGATGAGGAGATCGAGGAAGACGACGCTGCAACTGCTGCCGGAGGTGTGGGTGACGGTGGACTGCGTGGCGGCGAGGGAGGAGGCGGTGGGGGAAGAGCTGGGGCGTACGGACGAGGAGAGGAAGAGGAATCTGGAGGAGGACACGTGTCCGGGGTTCGTATCGGACGGTGAGAATAGAGTGGAGTGGTTGAACAGGGCGTTTGTGCGGATGGTGAGGCGGAGGAGTGGCGGCGAGGGTGAGTCACCGGCGGTGAGGTTGGTGGTCGTGTCGGAGGCGGAAATGGGATTAGGGTTTACGTGTCGGATAAAGGTGGAGTTCAGAATTGGGGGAAGGGGAATGGTGAAATTGGTGCCGTGCGATGCGTGGAGAATGGACGGTGGAGGATTTGCATGGAAACTAGACGTCAAAGCTGCCCTCACTTTGGCTCCTTTGCTTCAAGATGATGATTTTCTGTAG MDGGGEAARRMMMRFRPIAPKPIAGGASVSAAPAISVVRTKRKYVRVARYNRKKKMRRSRKTTLQLLPEVWVTVDCVAAREEAVGEELGRTDEERKRNLEEDTCPGFVSDGENRVEWLNRAFVRMVRRRSGGEGESPAVRLVVVSEAEMGLGFTCRIKVEFRIGGRGMVKLVPCDAWRMDGGGFAWKLDVKAALTLAPLLQDDDFL Homology
BLAST of Sed0022238 vs. NCBI nr
Match: XP_038886679.1 (uncharacterized protein LOC120076820 [Benincasa hispida]) HSP 1 Score: 199.9 bits (507), Expect = 2.1e-47 Identity = 139/293 (47.44%), Postives = 166/293 (56.66%), Query Frame = 0
BLAST of Sed0022238 vs. NCBI nr
Match: XP_022992618.1 (uncharacterized protein LOC111488911 [Cucurbita maxima] >XP_022992619.1 uncharacterized protein LOC111488911 [Cucurbita maxima]) HSP 1 Score: 187.2 bits (474), Expect = 1.4e-43 Identity = 132/298 (44.30%), Postives = 161/298 (54.03%), Query Frame = 0
BLAST of Sed0022238 vs. NCBI nr
Match: KAG7015962.1 (hypothetical protein SDJN02_21066, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.7 bits (470), Expect = 4.2e-43 Identity = 134/301 (44.52%), Postives = 161/301 (53.49%), Query Frame = 0
BLAST of Sed0022238 vs. NCBI nr
Match: XP_022938665.1 (uncharacterized protein LOC111444824 [Cucurbita moschata] >XP_022938666.1 uncharacterized protein LOC111444824 [Cucurbita moschata] >KAG6578382.1 hypothetical protein SDJN03_22830, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-42 Identity = 133/300 (44.33%), Postives = 160/300 (53.33%), Query Frame = 0
BLAST of Sed0022238 vs. NCBI nr
Match: XP_008441369.1 (PREDICTED: uncharacterized protein LOC103485503 [Cucumis melo] >KAA0056601.1 uncharacterized protein E6C27_scaffold288G001140 [Cucumis melo var. makuwa] >TYK24284.1 uncharacterized protein E5676_scaffold205G00490 [Cucumis melo var. makuwa]) HSP 1 Score: 182.2 bits (461), Expect = 4.6e-42 Identity = 135/313 (43.13%), Postives = 165/313 (52.72%), Query Frame = 0
BLAST of Sed0022238 vs. ExPASy TrEMBL
Match: A0A6J1JZR6 (uncharacterized protein LOC111488911 OS=Cucurbita maxima OX=3661 GN=LOC111488911 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 6.9e-44 Identity = 132/298 (44.30%), Postives = 161/298 (54.03%), Query Frame = 0
BLAST of Sed0022238 vs. ExPASy TrEMBL
Match: A0A6J1FKE3 (uncharacterized protein LOC111444824 OS=Cucurbita moschata OX=3662 GN=LOC111444824 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 7.6e-43 Identity = 133/300 (44.33%), Postives = 160/300 (53.33%), Query Frame = 0
BLAST of Sed0022238 vs. ExPASy TrEMBL
Match: A0A5D3DL11 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00490 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 2.2e-42 Identity = 135/313 (43.13%), Postives = 165/313 (52.72%), Query Frame = 0
BLAST of Sed0022238 vs. ExPASy TrEMBL
Match: A0A1S3B3A6 (uncharacterized protein LOC103485503 OS=Cucumis melo OX=3656 GN=LOC103485503 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 2.2e-42 Identity = 135/313 (43.13%), Postives = 165/313 (52.72%), Query Frame = 0
BLAST of Sed0022238 vs. ExPASy TrEMBL
Match: A0A0A0K8B5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008060 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42 Identity = 129/285 (45.26%), Postives = 157/285 (55.09%), Query Frame = 0
BLAST of Sed0022238 vs. TAIR 10
Match: AT5G40800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 115.2 bits (287), Expect = 6.4e-26 Identity = 89/249 (35.74%), Postives = 114/249 (45.78%), Query Frame = 0
BLAST of Sed0022238 vs. TAIR 10
Match: AT3G27250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40800.1); Has 104 Blast hits to 104 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25 Identity = 87/257 (33.85%), Postives = 116/257 (45.14%), Query Frame = 0
BLAST of Sed0022238 vs. TAIR 10
Match: AT5G63350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 103 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 6.0e-24 Identity = 97/284 (34.15%), Postives = 119/284 (41.90%), Query Frame = 0
BLAST of Sed0022238 vs. TAIR 10
Match: AT3G48510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 107.8 bits (268), Expect = 1.0e-23 Identity = 92/272 (33.82%), Postives = 115/272 (42.28%), Query Frame = 0
BLAST of Sed0022238 vs. TAIR 10
Match: AT5G50360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22 Identity = 68/197 (34.52%), Postives = 99/197 (50.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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