Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCATTCATTACCCACTTTTTTTCTCTTATCCAAACAAAACCTCGGTAAATCCTTCCTTCTTGTTGCTTACGCCGTTTCTTCCCACTTTTTATAGATTAAACGACGATGCCCATTTCAATTCGTTCCGCTTGAACCCTTAGGATTGGCAGGGGAGAAATCCCCCATAAACCCCTTTCCATTATCATCCCCTGAATCAGTCTCCAATGCCACAATCCCACATAACAAAGGCAACCCACCTGAGCAAAGAGAAATTTTCCTGAAGGATTCAACCCCAGACGCGTTCTTCAGCTTCCGGTAAGGAATGTCTCTTTCTTTAGCACTGACTTCGCCGTTAATCTCTGCATTTTTGCCAAGAAAAACCCTTATCTCGCTTAATCTCAACCGACCCTTCATTAGTCACAGTAAACAATCTATCCTTAGGTCGAATCAATGTGTAAACGTTCGCCATTTCAACTGTTTCAATCCCGTTTTCTCGACGTCTCGGATCTTTCTCACTCGAGTCTCATCGAATGAGCTTCTTGAAGGTGATGATGATGATGACATTGTGCCCTCTTTTGAGGAGAAACCGGTTAAAGTTCTGCTTTTGGTTCTGTTCTGGGCTTCTCTTTCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGATTCTATCAGAGCTTCAAATTTTGGCCTAAAGATCGCCAGCGCATTGCAGAGCTCAGGATGGCCGGCCGAGGCTGTTGTATTTGCCCTCGCGACGCTTCCGGTAATTGAGCTCCGTGGGGCGATCCCTGTTGGCTATTGGATGCAGCTTAAGCCTGTAGCTCTAACCGTTCTATCTGTTCTTGGGTGAGTTTTCAAATTTTGATTTCACAAAACTCTATTTTTAGAATCTGCATTTGGTATAACTAATATTGTTATTTCTCCTCAACTGCTGCTGCATTTTGTGTTTGTGTACTTTTCATGTACATGGACATCAACATTTTAGTATGAGTTTCATTTCAAATAAAATAGTAATGAAATAGACTATTACAAGCTCCTGCTTTATTGGTATTACATATATTAGTGGTCTCCAAGGGGTGGCACAGTAGTTGAAGGCGCTTTGAGGGTATGCTCTCCCAGTGTTTTAAAAAGCCTCGTTAGGCGCGCGCCTAGGCCCAAGGCGCACCTCTTGCGCCTGGCGAGGCGCTCTTAATTAGGCTCGCGCCTTTTGGTGCCTTACGTGAAGCTTCAGACATCAAAAGGCGCATGCCTTGGGGGCTTTTTATTTTCTTTATATTTTTTCATGTTTTCACCTTTATCCTTTGTGTGATCCCCGTACTAAGTCATTCAAAGCGCAAGTTAACTAATTCAAGACATTTCAATACCTTAAATAGCTTAATTCTTCAACTCACAAAGACAACATTCACTTAAATGAAAGGTTAATAGTTGAATCTTATGTATGTTTTGTATATATTCTTAGTTAAACTTCATTTCTTTTCATGAAATGAAGGCTAATAGTTAAATTTAATGTATGTTTTGTATATTATTTTTGGTTAAAATTTCATTTATGTCTATGGAAATGTGTATATACACATATATATAAAAAAATATGTTTTTTATATCGTGCGCCTGATGTAATAAAGCCCGCGCCTTATGGTATGCCTTGCACCTCAGGCTATAGAGGCCCATTGCGCCTTGAGCTTTTTAAAACACTGCTTATGTCAATTCTTTTCTTTATAAAGTACTTATCAATTTCAAACCATGTTGTCATAATAAACTCACCCAAACATTACTTGTGTGATCCTTAATTACTCTAGAAGTCTTTTTATTCAAATACCTTCACGAAGGGTATTTCCCAGAGTAAGTATGTTATTGACTTGTTATTTGAAATAGGGAAGCTGGGAGTGAAACCGTGTGATACTCTGATGCTACCTAATCTACATCTTGTTAAAGATTGAGAACCGTTTAATGATCCTGAAAGGTATAAAAGAATGGTTGGGAAATTAAATTACTTGACTGTCACAAGACCGGATATAGCATACTCAGTAAGTGTGGTGAGCCAATATATGTTGTTTCCTATTGTGGATCAGTAGGTGGCCGTGGAACAAATCTTGAGTTAATTGAAGCAAGCACCTGCTCGAGGTGTATTGTATAAAAATCACAGTCACACTAATGTTAAATTTTACTCTGATGCTGATTGGGTACGGTCTAAGTAAGACAGAAGGTCTACCTCTGGGTATTGTGTCTTTGTGGGAGGCAATCTAGTGTCGTGGAAAAGAAAGAAACAAAATGTGGTTTCTCGTTCGAGTGTTGAGTTAAAATATCGGACTACAGCTCAATCAACATGTGAGATAGTATGGTTAGTTCAATTGTTGACTGAAATTGGTGTGGGAACTAATATACCGGCTAGGCTATGATGTCATAATCAAGCTATTCACTTAGCATCCAATCTAGTGATTTATGAGAGAATTAAGTCTATTGAAGTGGACTGTCACTTTATTTGTGAGAAGATATAACGAGGATTAATTTCCCATTTCGTAGATAGGGTTTACTGCTTTTAATACATAGCCACATAAATAAAATAACGACTTTTGAGTCCCAACTCTAACTATGTAAAATTACCAAGTACTTAACTAAATAATACACTTAAATACATTAAAATACATATATATTCTAACATTTCATTCACCTTTCATGAAAATTGGCGTTTTTTATAGCTCGCAAGAGTTTGTTTGATTTTGTTGGGTCTTTTGGTTGAGAGGAACAATGAGATCTTTAAAGGGGCTGAGAGACCTCGGGAGGAGGTTTAGTACCTTGTTGGATTTCACGTTTCTACTTGGGTTTTAGTGCTTTTCGTAATAATCCATTGAGATTTATTTTTGCTGATTGAAACTCATTTTCTTTTAGCTTGGTTCTTTTTTTTATGGGGTTTATATTTTGTATGCCTCTTGTATTATTTAACTTGTTTAGAAAGAAAGTTTGGTCTTCTTAATCATGAAATAATAGTACTAATAATAATTTGTGGGTTCTAATTTCAGGAACATGGTTCCTGTGCCCTTCATCATACTCTATTTAAAGAAGTTTGCAACTTTCCTTGCGGGAAGGAACGCTACTGCCTCTCGATTCCTTGATTTGTTATTCAAGAGGGCCAAAGAGAAAGCTGCACCTGTTGAAGAGTTTCAATGGCTCGGTCTAATGCTATTTGTGGCTGTACCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATAATAGCTTCCATACTAGATATGCCATTCTGGTCAGGCGTCTCGGCAAACTTCTTTGGTGTTGTATTGGCAGGGCTTTTGGTGAATTTGTTGGTGAATCTTGGTCTTAAGGAAGCCATTGTCACTGGAGTGGTTCTTTTCATTATATCGACTTTCATGTGGAGCATTCTTCGACTGATTAGAAAAGCATTTAATAAATGAATTAAATTGAAAAGGTTAGGCATTTCAATGTGTAGGAACAATGAACAAGATCCTGTTTGATCTTAGGGTGATTTATGACATAGACTTGTTAGTTTAAGTTGGTACTCTGATCAGTTGATTACATGTTATTTTCTTGGACGCGTAGAATTCTCTTATATTATGACAGAGTAGTTGAAGGTGTGCAGATGATGCAACTTTAGGCAAAGTTTATCCTGTAAACACTGTTCAGAAGAGAAAACTTATGCTAAAAGCCTAAAACTACTTTCATTTGTTATACCAAGCTCAGAAGGGC
mRNA sequence
GTTCATTCATTACCCACTTTTTTTCTCTTATCCAAACAAAACCTCGGTAAATCCTTCCTTCTTGTTGCTTACGCCGTTTCTTCCCACTTTTTATAGATTAAACGACGATGCCCATTTCAATTCGTTCCGCTTGAACCCTTAGGATTGGCAGGGGAGAAATCCCCCATAAACCCCTTTCCATTATCATCCCCTGAATCAGTCTCCAATGCCACAATCCCACATAACAAAGGCAACCCACCTGAGCAAAGAGAAATTTTCCTGAAGGATTCAACCCCAGACGCGTTCTTCAGCTTCCGGTAAGGAATGTCTCTTTCTTTAGCACTGACTTCGCCGTTAATCTCTGCATTTTTGCCAAGAAAAACCCTTATCTCGCTTAATCTCAACCGACCCTTCATTAGTCACAGTAAACAATCTATCCTTAGGTCGAATCAATGTGTAAACGTTCGCCATTTCAACTGTTTCAATCCCGTTTTCTCGACGTCTCGGATCTTTCTCACTCGAGTCTCATCGAATGAGCTTCTTGAAGGTGATGATGATGATGACATTGTGCCCTCTTTTGAGGAGAAACCGGTTAAAGTTCTGCTTTTGGTTCTGTTCTGGGCTTCTCTTTCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGATTCTATCAGAGCTTCAAATTTTGGCCTAAAGATCGCCAGCGCATTGCAGAGCTCAGGATGGCCGGCCGAGGCTGTTGTATTTGCCCTCGCGACGCTTCCGGTAATTGAGCTCCGTGGGGCGATCCCTGTTGGCTATTGGATGCAGCTTAAGCCTGTAGCTCTAACCGTTCTATCTGTTCTTGGGAACATGGTTCCTGTGCCCTTCATCATACTCTATTTAAAGAAGTTTGCAACTTTCCTTGCGGGAAGGAACGCTACTGCCTCTCGATTCCTTGATTTGTTATTCAAGAGGGCCAAAGAGAAAGCTGCACCTGTTGAAGAGTTTCAATGGCTCGGTCTAATGCTATTTGTGGCTGTACCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATAATAGCTTCCATACTAGATATGCCATTCTGGTCAGGCGTCTCGGCAAACTTCTTTGGTGTTGTATTGGCAGGGCTTTTGGTGAATTTGTTGGTGAATCTTGGTCTTAAGGAAGCCATTGTCACTGGAGTGGTTCTTTTCATTATATCGACTTTCATGTGGAGCATTCTTCGACTGATTAGAAAAGCATTTAATAAATGAATTAAATTGAAAAGGTTAGGCATTTCAATGTGTAGGAACAATGAACAAGATCCTGTTTGATCTTAGGGTGATTTATGACATAGACTTGTTAGTTTAAGTTGGTACTCTGATCAGTTGATTACATGTTATTTTCTTGGACGCGTAGAATTCTCTTATATTATGACAGAGTAGTTGAAGGTGTGCAGATGATGCAACTTTAGGCAAAGTTTATCCTGTAAACACTGTTCAGAAGAGAAAACTTATGCTAAAAGCCTAAAACTACTTTCATTTGTTATACCAAGCTCAGAAGGGC
Coding sequence (CDS)
ATGTCTCTTTCTTTAGCACTGACTTCGCCGTTAATCTCTGCATTTTTGCCAAGAAAAACCCTTATCTCGCTTAATCTCAACCGACCCTTCATTAGTCACAGTAAACAATCTATCCTTAGGTCGAATCAATGTGTAAACGTTCGCCATTTCAACTGTTTCAATCCCGTTTTCTCGACGTCTCGGATCTTTCTCACTCGAGTCTCATCGAATGAGCTTCTTGAAGGTGATGATGATGATGACATTGTGCCCTCTTTTGAGGAGAAACCGGTTAAAGTTCTGCTTTTGGTTCTGTTCTGGGCTTCTCTTTCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGATTCTATCAGAGCTTCAAATTTTGGCCTAAAGATCGCCAGCGCATTGCAGAGCTCAGGATGGCCGGCCGAGGCTGTTGTATTTGCCCTCGCGACGCTTCCGGTAATTGAGCTCCGTGGGGCGATCCCTGTTGGCTATTGGATGCAGCTTAAGCCTGTAGCTCTAACCGTTCTATCTGTTCTTGGGAACATGGTTCCTGTGCCCTTCATCATACTCTATTTAAAGAAGTTTGCAACTTTCCTTGCGGGAAGGAACGCTACTGCCTCTCGATTCCTTGATTTGTTATTCAAGAGGGCCAAAGAGAAAGCTGCACCTGTTGAAGAGTTTCAATGGCTCGGTCTAATGCTATTTGTGGCTGTACCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATAATAGCTTCCATACTAGATATGCCATTCTGGTCAGGCGTCTCGGCAAACTTCTTTGGTGTTGTATTGGCAGGGCTTTTGGTGAATTTGTTGGTGAATCTTGGTCTTAAGGAAGCCATTGTCACTGGAGTGGTTCTTTTCATTATATCGACTTTCATGTGGAGCATTCTTCGACTGATTAGAAAAGCATTTAATAAATGA
Protein sequence
MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTSRIFLTRVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVDSIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVLGNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIISTFMWSILRLIRKAFNK
Homology
BLAST of Sed0022227 vs. NCBI nr
Match:
KAG7013172.1 (hypothetical protein SDJN02_25928 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 528.5 bits (1360), Expect = 4.0e-146
Identity = 280/316 (88.61%), Postives = 296/316 (93.67%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL+SAF RKTLISLNLNRP IS KQS+ RS+ C+N+RHFNCFNPVFSTS
Sbjct: 1 MATSLVLTSPLMSAFSARKTLISLNLNRPSISQGKQSLPRSSSCINIRHFNCFNPVFSTS 60
Query: 61 RI--FLTRVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
R+ +TR SSNE LE DDI+PSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD
Sbjct: 61 RMSCTVTRCSSNEFLE---VDDILPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIASALQSSGWPAEA+VFALATLPV+ELRGAIPVGYWMQLKPVALTVLSVL
Sbjct: 121 SIRASNFGLKIASALQSSGWPAEAIVFALATLPVVELRGAIPVGYWMQLKPVALTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVPFIILYLKKFATFLAGRNATAS+FLD+LFKRAK KAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPFIILYLKKFATFLAGRNATASQFLDMLFKRAKAKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSG+SANFFGVVLAGLLVNLLVNLGLKEA+ TGV+LFIIS
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGLSANFFGVVLAGLLVNLLVNLGLKEAVFTGVILFIIS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILRLIRKAFNK
Sbjct: 301 TFMWSILRLIRKAFNK 313
BLAST of Sed0022227 vs. NCBI nr
Match:
XP_023542277.1 (uncharacterized protein LOC111802220 [Cucurbita pepo subsp. pepo] >XP_023542278.1 uncharacterized protein LOC111802220 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 524.6 bits (1350), Expect = 5.8e-145
Identity = 278/316 (87.97%), Postives = 295/316 (93.35%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL+SAF RKTLISLNLNRP IS KQ + RS+ C+N+RHFNCFNPVFSTS
Sbjct: 1 MATSLVLTSPLMSAFSARKTLISLNLNRPSISQGKQPLPRSSSCINIRHFNCFNPVFSTS 60
Query: 61 RI--FLTRVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
R+ +TR SSNE LE DDI+PSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD
Sbjct: 61 RMSCTVTRCSSNEFLE---VDDILPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIASALQSSGWPAEA+VFALATLPV+ELRGAIPVGYWMQLKPVALTVLSVL
Sbjct: 121 SIRASNFGLKIASALQSSGWPAEAIVFALATLPVVELRGAIPVGYWMQLKPVALTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVPFIILYLKKFATFLAGRNATAS+FLD+LFKRAK KAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPFIILYLKKFATFLAGRNATASQFLDMLFKRAKVKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSG+SANFFGVVLAGLLVNLLVNLGLKEA+ TGV+LFIIS
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGLSANFFGVVLAGLLVNLLVNLGLKEAVFTGVILFIIS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILRLI+KAFNK
Sbjct: 301 TFMWSILRLIQKAFNK 313
BLAST of Sed0022227 vs. NCBI nr
Match:
XP_022944972.1 (uncharacterized protein LOC111449349 [Cucurbita moschata] >XP_022944973.1 uncharacterized protein LOC111449349 [Cucurbita moschata])
HSP 1 Score: 523.1 bits (1346), Expect = 1.7e-144
Identity = 277/316 (87.66%), Postives = 294/316 (93.04%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL+SAF RKTLISLNLNRP IS QS+ RS+ C+N+RHFNCFNPVFSTS
Sbjct: 1 MATSLVLTSPLMSAFSARKTLISLNLNRPSISQGNQSLPRSSSCINIRHFNCFNPVFSTS 60
Query: 61 RI--FLTRVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
R+ +TR SSNE LE DDI+PSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD
Sbjct: 61 RLSCTVTRCSSNEFLE---VDDILPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIASALQSSGWPAEA+VFALATLPV+ELRGAIPVGYWMQLKPVALTVLSVL
Sbjct: 121 SIRASNFGLKIASALQSSGWPAEAIVFALATLPVVELRGAIPVGYWMQLKPVALTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVPFIILYLKK ATFLAGRNATAS+FLD+LFKRAK KAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPFIILYLKKLATFLAGRNATASQFLDMLFKRAKAKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSG+SANFFGVVLAGLLVNLLVNLGLKEA+ TGV+LFIIS
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGLSANFFGVVLAGLLVNLLVNLGLKEAVFTGVILFIIS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILRLI+KAFNK
Sbjct: 301 TFMWSILRLIQKAFNK 313
BLAST of Sed0022227 vs. NCBI nr
Match:
XP_022968257.1 (uncharacterized protein LOC111467549 [Cucurbita maxima] >XP_022968258.1 uncharacterized protein LOC111467549 [Cucurbita maxima] >XP_022968259.1 uncharacterized protein LOC111467549 [Cucurbita maxima])
HSP 1 Score: 519.2 bits (1336), Expect = 2.4e-143
Identity = 277/317 (87.38%), Postives = 295/317 (93.06%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL+SAF RKTLISLNLNRP I+ KQ + RS+ C+N+RHFNCFNPVFSTS
Sbjct: 1 MATSLVLTSPLMSAFSARKTLISLNLNRPSINPGKQPLPRSSSCINIRHFNCFNPVFSTS 60
Query: 61 RI--FLTRVSSNELLEGDDDDDIVPSFEEKPVKV-LLLVLFWASLSLAWFAASGDAKAAV 120
R+ +TR SSNE LE DDI+PSFEEKPVKV +LLVLFWASLSLAWFAASGDAKAAV
Sbjct: 61 RMSCTVTRCSSNEFLE---VDDILPSFEEKPVKVMMLLVLFWASLSLAWFAASGDAKAAV 120
Query: 121 DSIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSV 180
DSIRASNFGLKIASALQSSGWPAEA+VFALATLPV+ELRGAIPVGYWMQLKPVALTVLSV
Sbjct: 121 DSIRASNFGLKIASALQSSGWPAEAIVFALATLPVVELRGAIPVGYWMQLKPVALTVLSV 180
Query: 181 LGNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAV 240
LGNMVPVPFIILYLKKFATFLAGRNATAS+FLD+LFKRAK KAAPVEEFQWLGLMLFVAV
Sbjct: 181 LGNMVPVPFIILYLKKFATFLAGRNATASQFLDMLFKRAKAKAAPVEEFQWLGLMLFVAV 240
Query: 241 PFPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFII 300
PFPGTGAWTGAIIASILDMPFWSG+SANFFGVVLAGLLVNLLVNLGLKEA+ TGV+LFII
Sbjct: 241 PFPGTGAWTGAIIASILDMPFWSGLSANFFGVVLAGLLVNLLVNLGLKEAVFTGVILFII 300
Query: 301 STFMWSILRLIRKAFNK 315
STFMWSILRLIRKAFNK
Sbjct: 301 STFMWSILRLIRKAFNK 314
BLAST of Sed0022227 vs. NCBI nr
Match:
XP_038893409.1 (uncharacterized protein LOC120082205 [Benincasa hispida])
HSP 1 Score: 506.5 bits (1303), Expect = 1.6e-139
Identity = 273/316 (86.39%), Postives = 288/316 (91.14%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL TSPLIS F PRKTL SL LNRP I+ SKQS+ S+ CVNVRHFN F VFSTS
Sbjct: 1 MTTSLPFTSPLISVFSPRKTLFSLKLNRPSITQSKQSLHLSSSCVNVRHFNYFKHVFSTS 60
Query: 61 RIF--LTRVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
RIF +TR SSN LE DD+I+PSFEEKPVKV+LLVLFWASLSLAWFAASGDAKAA D
Sbjct: 61 RIFRTVTRSSSNGFLE---DDEILPSFEEKPVKVVLLVLFWASLSLAWFAASGDAKAAAD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIASALQSSGW EAVVFALATLPVIELRGAIPVGYW+ LKPVALTVLSVL
Sbjct: 121 SIRASNFGLKIASALQSSGWSPEAVVFALATLPVIELRGAIPVGYWLHLKPVALTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVPFIILYL+KFATFLAGRNA+AS+FLD+LFKRAKEKAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPFIILYLRKFATFLAGRNASASQFLDMLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSGVSANFFGVV+AGLLVNLLVNLGLKEAIVTGV+LFIIS
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVVAGLLVNLLVNLGLKEAIVTGVILFIIS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILRLIRKAF K
Sbjct: 301 TFMWSILRLIRKAFRK 313
BLAST of Sed0022227 vs. ExPASy TrEMBL
Match:
A0A6J1FZI4 (uncharacterized protein LOC111449349 OS=Cucurbita moschata OX=3662 GN=LOC111449349 PE=4 SV=1)
HSP 1 Score: 523.1 bits (1346), Expect = 8.1e-145
Identity = 277/316 (87.66%), Postives = 294/316 (93.04%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL+SAF RKTLISLNLNRP IS QS+ RS+ C+N+RHFNCFNPVFSTS
Sbjct: 1 MATSLVLTSPLMSAFSARKTLISLNLNRPSISQGNQSLPRSSSCINIRHFNCFNPVFSTS 60
Query: 61 RI--FLTRVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
R+ +TR SSNE LE DDI+PSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD
Sbjct: 61 RLSCTVTRCSSNEFLE---VDDILPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIASALQSSGWPAEA+VFALATLPV+ELRGAIPVGYWMQLKPVALTVLSVL
Sbjct: 121 SIRASNFGLKIASALQSSGWPAEAIVFALATLPVVELRGAIPVGYWMQLKPVALTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVPFIILYLKK ATFLAGRNATAS+FLD+LFKRAK KAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPFIILYLKKLATFLAGRNATASQFLDMLFKRAKAKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSG+SANFFGVVLAGLLVNLLVNLGLKEA+ TGV+LFIIS
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGLSANFFGVVLAGLLVNLLVNLGLKEAVFTGVILFIIS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILRLI+KAFNK
Sbjct: 301 TFMWSILRLIQKAFNK 313
BLAST of Sed0022227 vs. ExPASy TrEMBL
Match:
A0A6J1HZ51 (uncharacterized protein LOC111467549 OS=Cucurbita maxima OX=3661 GN=LOC111467549 PE=4 SV=1)
HSP 1 Score: 519.2 bits (1336), Expect = 1.2e-143
Identity = 277/317 (87.38%), Postives = 295/317 (93.06%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL+SAF RKTLISLNLNRP I+ KQ + RS+ C+N+RHFNCFNPVFSTS
Sbjct: 1 MATSLVLTSPLMSAFSARKTLISLNLNRPSINPGKQPLPRSSSCINIRHFNCFNPVFSTS 60
Query: 61 RI--FLTRVSSNELLEGDDDDDIVPSFEEKPVKV-LLLVLFWASLSLAWFAASGDAKAAV 120
R+ +TR SSNE LE DDI+PSFEEKPVKV +LLVLFWASLSLAWFAASGDAKAAV
Sbjct: 61 RMSCTVTRCSSNEFLE---VDDILPSFEEKPVKVMMLLVLFWASLSLAWFAASGDAKAAV 120
Query: 121 DSIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSV 180
DSIRASNFGLKIASALQSSGWPAEA+VFALATLPV+ELRGAIPVGYWMQLKPVALTVLSV
Sbjct: 121 DSIRASNFGLKIASALQSSGWPAEAIVFALATLPVVELRGAIPVGYWMQLKPVALTVLSV 180
Query: 181 LGNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAV 240
LGNMVPVPFIILYLKKFATFLAGRNATAS+FLD+LFKRAK KAAPVEEFQWLGLMLFVAV
Sbjct: 181 LGNMVPVPFIILYLKKFATFLAGRNATASQFLDMLFKRAKAKAAPVEEFQWLGLMLFVAV 240
Query: 241 PFPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFII 300
PFPGTGAWTGAIIASILDMPFWSG+SANFFGVVLAGLLVNLLVNLGLKEA+ TGV+LFII
Sbjct: 241 PFPGTGAWTGAIIASILDMPFWSGLSANFFGVVLAGLLVNLLVNLGLKEAVFTGVILFII 300
Query: 301 STFMWSILRLIRKAFNK 315
STFMWSILRLIRKAFNK
Sbjct: 301 STFMWSILRLIRKAFNK 314
BLAST of Sed0022227 vs. ExPASy TrEMBL
Match:
A0A0A0KQH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604240 PE=4 SV=1)
HSP 1 Score: 506.1 bits (1302), Expect = 1.0e-139
Identity = 273/316 (86.39%), Postives = 289/316 (91.46%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL SAF PRKTL SL LNRP I+ S QS+ S+ VNV HFNCF+PV TS
Sbjct: 1 MTTSLPLTSPLFSAFSPRKTLFSLKLNRPSITRSTQSLHFSSPFVNVPHFNCFDPVSRTS 60
Query: 61 RIFLT--RVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
RI T R SSN LE DD+I+PSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD
Sbjct: 61 RIIRTVPRSSSNGFLE---DDEIIPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIASALQ+SGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL
Sbjct: 121 SIRASNFGLKIASALQNSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVPFIILYLKKFATFLAGRNA+AS+FLD+LFKRAKEKAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPFIILYLKKFATFLAGRNASASQFLDMLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSGVSANFFGVV+AGLLVNLLVNLGLKEAIVTGV+LFIIS
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVVAGLLVNLLVNLGLKEAIVTGVILFIIS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILR+I+K+F K
Sbjct: 301 TFMWSILRMIKKSFEK 313
BLAST of Sed0022227 vs. ExPASy TrEMBL
Match:
A0A6J1DB35 (uncharacterized protein LOC111019066 OS=Momordica charantia OX=3673 GN=LOC111019066 PE=4 SV=1)
HSP 1 Score: 498.0 bits (1281), Expect = 2.8e-137
Identity = 265/316 (83.86%), Postives = 286/316 (90.51%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M S+A T P++SAF PRKT I L LNRP +S SKQS+ S+ C+NVRHFN F+P+F+TS
Sbjct: 1 MGTSVASTPPIMSAFSPRKTHIFLKLNRPSVSQSKQSLHSSSPCINVRHFNHFSPIFATS 60
Query: 61 RIF--LTRVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
RIF +TR SN +E +DDI+PSFEEKPVK+LLLVLFWASLSL+WFAASGDAKAA D
Sbjct: 61 RIFRTVTRAFSNGFVE---EDDIMPSFEEKPVKILLLVLFWASLSLSWFAASGDAKAAGD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIA+ L+SSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL
Sbjct: 121 SIRASNFGLKIATTLRSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVP IILYLKKFATFLAGRNA+ASRFLD+LFKR KEKAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPLIILYLKKFATFLAGRNASASRFLDMLFKRGKEKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGV LFI+S
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVFLFIVS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILRLI KAF K
Sbjct: 301 TFMWSILRLISKAFRK 313
BLAST of Sed0022227 vs. ExPASy TrEMBL
Match:
A0A5A7SV67 (Sm_multidrug_ex domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00280 PE=4 SV=1)
HSP 1 Score: 496.9 bits (1278), Expect = 6.2e-137
Identity = 268/316 (84.81%), Postives = 285/316 (90.19%), Query Frame = 0
Query: 1 MSLSLALTSPLISAFLPRKTLISLNLNRPFISHSKQSILRSNQCVNVRHFNCFNPVFSTS 60
M+ SL LTSPL SAF PRKTL SL LNRP I+ S S+ S+ VNV H NC +PV STS
Sbjct: 1 MTTSLPLTSPLFSAFSPRKTLFSLKLNRPSITQSTHSLHFSSPFVNVPHSNCSDPVSSTS 60
Query: 61 RIFLT--RVSSNELLEGDDDDDIVPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVD 120
RI T R SSN LE DD+I+PSFEEKP+KVL+LVLFWASLSLAWFAASGDAKAAVD
Sbjct: 61 RIIRTVPRSSSNGFLE---DDEIIPSFEEKPIKVLILVLFWASLSLAWFAASGDAKAAVD 120
Query: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVL 180
SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPV LTVLSVL
Sbjct: 121 SIRASNFGLKIASALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVTLTVLSVL 180
Query: 181 GNMVPVPFIILYLKKFATFLAGRNATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
GNMVPVPFIILYLKKFATFLAGRNA+AS+FLD+LFKRAKEKAAPVEEFQWLGLMLFVAVP
Sbjct: 181 GNMVPVPFIILYLKKFATFLAGRNASASQFLDMLFKRAKEKAAPVEEFQWLGLMLFVAVP 240
Query: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIIS 300
FPGTGAWTGAIIASILDMPFWSGVSANFFGVV+AGLLVNLLVNLGLKEAIVTG +LFIIS
Sbjct: 241 FPGTGAWTGAIIASILDMPFWSGVSANFFGVVVAGLLVNLLVNLGLKEAIVTGAILFIIS 300
Query: 301 TFMWSILRLIRKAFNK 315
TFMWSILR+I+K+F K
Sbjct: 301 TFMWSILRMIKKSFEK 313
BLAST of Sed0022227 vs. TAIR 10
Match:
AT2G02590.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative small multi-drug export (InterPro:IPR009577); Has 405 Blast hits to 405 proteins in 185 species: Archae - 65; Bacteria - 295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). )
HSP 1 Score: 351.3 bits (900), Expect = 8.1e-97
Identity = 179/230 (77.83%), Postives = 201/230 (87.39%), Query Frame = 0
Query: 82 VPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVDSIRASNFGLKIASALQSSGWPAE 141
+PS PVK + V+ WAS SL WFA SGDAKAA DSI++S+FGL+IAS L+ GWP E
Sbjct: 89 LPSIGVNPVKFAICVVLWASFSLLWFARSGDAKAATDSIKSSSFGLRIASTLRRFGWPDE 148
Query: 142 AVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVLGNMVPVPFIILYLKKFATFLAGR 201
AVVFALATLPVIELRGAIPVGYWMQLKPV LT SVLGNMVPVPFI+LYLK FA+F+AG+
Sbjct: 149 AVVFALATLPVIELRGAIPVGYWMQLKPVVLTSFSVLGNMVPVPFIVLYLKTFASFVAGK 208
Query: 202 NATASRFLDLLFKRAKEKAAPVEEFQWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWSG 261
+ TAS+ LD+LFKRAKEKA PVEEF+WLGLMLFVAVPFPGTGAWTGAIIASILDMPFWS
Sbjct: 209 SQTASKLLDILFKRAKEKAGPVEEFKWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWSA 268
Query: 262 VSANFFGVVLAGLLVNLLVNLGLKEAIVTGVVLFIISTFMWSILRLIRKA 312
VS+NF GVVLAGLLVNLLVNLGLK+AIV G+ LF +STFMWS+LR IRK+
Sbjct: 269 VSSNFCGVVLAGLLVNLLVNLGLKQAIVAGIALFFVSTFMWSVLRNIRKS 318
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7013172.1 | 4.0e-146 | 88.61 | hypothetical protein SDJN02_25928 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023542277.1 | 5.8e-145 | 87.97 | uncharacterized protein LOC111802220 [Cucurbita pepo subsp. pepo] >XP_023542278.... | [more] |
XP_022944972.1 | 1.7e-144 | 87.66 | uncharacterized protein LOC111449349 [Cucurbita moschata] >XP_022944973.1 unchar... | [more] |
XP_022968257.1 | 2.4e-143 | 87.38 | uncharacterized protein LOC111467549 [Cucurbita maxima] >XP_022968258.1 uncharac... | [more] |
XP_038893409.1 | 1.6e-139 | 86.39 | uncharacterized protein LOC120082205 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FZI4 | 8.1e-145 | 87.66 | uncharacterized protein LOC111449349 OS=Cucurbita moschata OX=3662 GN=LOC1114493... | [more] |
A0A6J1HZ51 | 1.2e-143 | 87.38 | uncharacterized protein LOC111467549 OS=Cucurbita maxima OX=3661 GN=LOC111467549... | [more] |
A0A0A0KQH3 | 1.0e-139 | 86.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604240 PE=4 SV=1 | [more] |
A0A6J1DB35 | 2.8e-137 | 83.86 | uncharacterized protein LOC111019066 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A5A7SV67 | 6.2e-137 | 84.81 | Sm_multidrug_ex domain-containing protein OS=Cucumis melo var. makuwa OX=1194695... | [more] |
Match Name | E-value | Identity | Description | |
AT2G02590.1 | 8.1e-97 | 77.83 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |