Sed0022159 (gene) Chayote v1

Overview


Name	Sed0022159
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WD repeat-containing protein RUP2-like
Location	LG01: 65025377 .. 65026898 (+)
RNA-Seq Expression	Sed0022159
Synteny	Sed0022159

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAATTGCATAGAAACTTTAGGTTTGTTTGGAAAAAAAAAAAAAAAAACTATAGGAAGCAAAGGGAAGGGTAAGGTGTGGGTGAATGGCGGCCGTAGATTGGCTCCAATTCCCAAACACCCAAATTTCCATACAATTTCTAATATTCCCTTTCCACTCCTTATGAATGGGAAATGAAATCCCTCTCCAATCCCAATCCCAATCCCCAAACGCACAGCCATTTGAATCCACGCCCCGCCGATGCGAGTGGGACATCTCCCTCGCATCGGTCGTCGTTTCCTCGTCGGCCATCTCCGCCGCCTCCGATATCCTCGGCGTTGTCGAATTCGACCCCTCGGATTCTCTCATCGCCACTGCCGGGATCGCGAGAAAGATCCGAGGCTACCGCCTTCGCACCCTCCTGCCGGACCGTAATGACGGCGACGTTGCCCTGTTGGACCACACCCGCGCTACTGAATTCTGTATATGTACCCCGGCCAAGCTCAGCAGCCTCCGCTGGAAGCCGGCGGCCGACGGCCGGATCCTGGGCGCCGGGGATTACGACGGCGTCGTGATGGAGTATGACCTCGACAGGAACGTGCCGGTCTTCGAGCGGGACGAGCACGGCGGGCGGCGCGTGTGGAGCGTGGACTACTCCGCGGTGGAACCGGTGGTCGGCGCTTCGGGGTCCGACGACGGGACGGTGCAGGTGTGGGACACGCGCTGCGACGGTGGGAGCTGCGTGGCGGCGGTGCAGCCGAGCGCGGTGGGAAGTCCGGTGTGTTGCGTGGAGTTCAACCCCCACGGCGGCGCGTTGGTGGTCGTGGGATGCGCAGACCGGAGAGCGTACGGTTACGACAGGCGGAAAATGACGGAGGCCGTTATGGTGTTGGAAGGGCACGCCAAAACGGTGACGTATTTGAAGTTTCTGGATGGCGAAACGGTTGTTTCCGCCAGCACGGACGGGAGTTTGAAGATGTGGAAAACGGAGGGAGGGGCGGGGGCATGTGCGGTTCGCACGTACGAGGGGCACGTGAACAGCCGGAGCTTCGTCGGGTTATCGGTGTGGAGCAACGGGGGTTTGATCGGGTGCGGGTCGGAGGACAAGCGGGTTTTTGTGTACGACAAGAGGTGGGGGGAGGCGATATGGGTTGGGTCGGGCTACGGGTCGGGTTTCGGGTTGGTGAGTAGCGTGTGTTGGAGGCAAATGGGTTACGGGTCGGATAAATGCATGCTGGTGGCGGGCGGGTCGGATGGGGTTTTGCAAGTTTTTGTGGGAGAGAGGAGGTCGTTATAATTTGACTCACAGTAAAATCTGACGGAACTTTTTAACCACCATCAAATTACTTACTACTAGGTAGGACCTTTTTTTTCACCATTTTACTGCTTTCATTTATCATAGAGTTTTATAATCACCTTAGTCAGATATTTGGATGTCATATTGATTGACATTTTTTATGTAATAAATTTTTTGTCATGGTGATAGAGTTTTTTACATTTGCATATGGTTTATAGGTGAATATTCCATCTATTTTTATGGC

mRNA sequence

AAAACAATTGCATAGAAACTTTAGGTTTGTTTGGAAAAAAAAAAAAAAAAACTATAGGAAGCAAAGGGAAGGGTAAGGTGTGGGTGAATGGCGGCCGTAGATTGGCTCCAATTCCCAAACACCCAAATTTCCATACAATTTCTAATATTCCCTTTCCACTCCTTATGAATGGGAAATGAAATCCCTCTCCAATCCCAATCCCAATCCCCAAACGCACAGCCATTTGAATCCACGCCCCGCCGATGCGAGTGGGACATCTCCCTCGCATCGGTCGTCGTTTCCTCGTCGGCCATCTCCGCCGCCTCCGATATCCTCGGCGTTGTCGAATTCGACCCCTCGGATTCTCTCATCGCCACTGCCGGGATCGCGAGAAAGATCCGAGGCTACCGCCTTCGCACCCTCCTGCCGGACCGTAATGACGGCGACGTTGCCCTGTTGGACCACACCCGCGCTACTGAATTCTGTATATGTACCCCGGCCAAGCTCAGCAGCCTCCGCTGGAAGCCGGCGGCCGACGGCCGGATCCTGGGCGCCGGGGATTACGACGGCGTCGTGATGGAGTATGACCTCGACAGGAACGTGCCGGTCTTCGAGCGGGACGAGCACGGCGGGCGGCGCGTGTGGAGCGTGGACTACTCCGCGGTGGAACCGGTGGTCGGCGCTTCGGGGTCCGACGACGGGACGGTGCAGGTGTGGGACACGCGCTGCGACGGTGGGAGCTGCGTGGCGGCGGTGCAGCCGAGCGCGGTGGGAAGTCCGGTGTGTTGCGTGGAGTTCAACCCCCACGGCGGCGCGTTGGTGGTCGTGGGATGCGCAGACCGGAGAGCGTACGGTTACGACAGGCGGAAAATGACGGAGGCCGTTATGGTGTTGGAAGGGCACGCCAAAACGGTGACGTATTTGAAGTTTCTGGATGGCGAAACGGTTGTTTCCGCCAGCACGGACGGGAGTTTGAAGATGTGGAAAACGGAGGGAGGGGCGGGGGCATGTGCGGTTCGCACGTACGAGGGGCACGTGAACAGCCGGAGCTTCGTCGGGTTATCGGTGTGGAGCAACGGGGGTTTGATCGGGTGCGGGTCGGAGGACAAGCGGGTTTTTGTGTACGACAAGAGGTGGGGGGAGGCGATATGGGTTGGGTCGGGCTACGGGTCGGGTTTCGGGTTGGTGAGTAGCGTGTGTTGGAGGCAAATGGGTTACGGGTCGGATAAATGCATGCTGGTGGCGGGCGGGTCGGATGGGGTTTTGCAAGTTTTTGTGGGAGAGAGGAGGTCGTTATAATTTGACTCACAGTAAAATCTGACGGAACTTTTTAACCACCATCAAATTACTTACTACTAGGTAGGACCTTTTTTTTCACCATTTTACTGCTTTCATTTATCATAGAGTTTTATAATCACCTTAGTCAGATATTTGGATGTCATATTGATTGACATTTTTTATGTAATAAATTTTTTGTCATGGTGATAGAGTTTTTTACATTTGCATATGGTTTATAGGTGAATATTCCATCTATTTTTATGGC

Coding sequence (CDS)

ATGGGAAATGAAATCCCTCTCCAATCCCAATCCCAATCCCCAAACGCACAGCCATTTGAATCCACGCCCCGCCGATGCGAGTGGGACATCTCCCTCGCATCGGTCGTCGTTTCCTCGTCGGCCATCTCCGCCGCCTCCGATATCCTCGGCGTTGTCGAATTCGACCCCTCGGATTCTCTCATCGCCACTGCCGGGATCGCGAGAAAGATCCGAGGCTACCGCCTTCGCACCCTCCTGCCGGACCGTAATGACGGCGACGTTGCCCTGTTGGACCACACCCGCGCTACTGAATTCTGTATATGTACCCCGGCCAAGCTCAGCAGCCTCCGCTGGAAGCCGGCGGCCGACGGCCGGATCCTGGGCGCCGGGGATTACGACGGCGTCGTGATGGAGTATGACCTCGACAGGAACGTGCCGGTCTTCGAGCGGGACGAGCACGGCGGGCGGCGCGTGTGGAGCGTGGACTACTCCGCGGTGGAACCGGTGGTCGGCGCTTCGGGGTCCGACGACGGGACGGTGCAGGTGTGGGACACGCGCTGCGACGGTGGGAGCTGCGTGGCGGCGGTGCAGCCGAGCGCGGTGGGAAGTCCGGTGTGTTGCGTGGAGTTCAACCCCCACGGCGGCGCGTTGGTGGTCGTGGGATGCGCAGACCGGAGAGCGTACGGTTACGACAGGCGGAAAATGACGGAGGCCGTTATGGTGTTGGAAGGGCACGCCAAAACGGTGACGTATTTGAAGTTTCTGGATGGCGAAACGGTTGTTTCCGCCAGCACGGACGGGAGTTTGAAGATGTGGAAAACGGAGGGAGGGGCGGGGGCATGTGCGGTTCGCACGTACGAGGGGCACGTGAACAGCCGGAGCTTCGTCGGGTTATCGGTGTGGAGCAACGGGGGTTTGATCGGGTGCGGGTCGGAGGACAAGCGGGTTTTTGTGTACGACAAGAGGTGGGGGGAGGCGATATGGGTTGGGTCGGGCTACGGGTCGGGTTTCGGGTTGGTGAGTAGCGTGTGTTGGAGGCAAATGGGTTACGGGTCGGATAAATGCATGCTGGTGGCGGGCGGGTCGGATGGGGTTTTGCAAGTTTTTGTGGGAGAGAGGAGGTCGTTATAA

Protein sequence

MGNEIPLQSQSQSPNAQPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKRWGEAIWVGSGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGERRSL

Homology

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BLAST of Sed0022159 vs. NCBI nr
Match: KAG6571808.1 (WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011503.1 WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 578.2 bits (1489), Expect = 5.2e-161
Identity = 287/353 (81.30%), Postives = 307/353 (86.97%), Query Frame = 0


Query: 20  ESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLL 79
           ESTP R EW  SLASVV SSS I  ASD LGVVEFDPSDSLIATAGIARKIRGY L  LL
Sbjct: 4   ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL 63

Query: 80  PDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVP 139
           P  NDG VA+LDH+RA+EFCICTPAKLSSLRWKP A GRILG+GDYDGVVMEYDL++ VP
Sbjct: 64  P--NDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVP 123

Query: 140 VFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVC 199
           VFERDEHGGRRVWS+DYS V+P+VGASGSDDGTVQVWDTRCDG  CVA VQPS V SPVC
Sbjct: 124 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSPVC 183

Query: 200 CVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTD 259
           CVEFNP+GGALVVVGCADR+AYGYDRRKMTEAVMV EGHAKTVTY+KF+DG T+VSASTD
Sbjct: 184 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 243

Query: 260 GSLKMWKTE----GGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKR 319
           GSLKMWK E    GG GA  VRTYEGHVN RSFVGLSVW NGGLIGCGSEDKRVFVYDKR
Sbjct: 244 GSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 303

Query: 320 WGEAIWVG--SGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGER 367
           WGEA+WV      GSG+GLVSSVCWRQ+  G D+C LVAGGSDGVL+VFVGE+
Sbjct: 304 WGEAVWVEEFDRVGSGYGLVSSVCWRQV--GEDECTLVAGGSDGVLKVFVGEK 352

[Close]

BLAST of Sed0022159 vs. NCBI nr
Match: XP_022952662.1 (WD repeat-containing protein RUP2-like [Cucurbita moschata])

HSP 1 Score: 577.4 bits (1487), Expect = 8.8e-161
Identity = 286/354 (80.79%), Postives = 308/354 (87.01%), Query Frame = 0


Query: 20  ESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLL 79
           ESTP R EW  SLASVV SSS I  ASD LGVVEFDPSDSLIATAGIARKIRGY L  LL
Sbjct: 4   ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL 63

Query: 80  PDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVP 139
           P  +DG VA+LDH+RA+EFCICTPAKLSSLRWKP A GRILG+GDYDGVVMEYDL++ VP
Sbjct: 64  P--HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVP 123

Query: 140 VFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVC 199
           VFERDEHGGRRVWS+DYS V+P+VGASGSDDGTVQVWDTRCDG  CVA VQPS V SPVC
Sbjct: 124 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVC 183

Query: 200 CVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTD 259
           CVEFNP+GGALVVVGCADR+AYGYDRRKMTEAVMV EGHAKTVTY+KF+DG T+VSASTD
Sbjct: 184 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 243

Query: 260 GSLKMWKTE----GGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKR 319
           GSLKMWK E    GG GA  VRTYEGHVN RSFVGLSVW NGGLIGCGSEDKRVFVYDKR
Sbjct: 244 GSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 303

Query: 320 WGEAIWVG--SGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGERR 368
           WGEA+WV      GSG+GLVSSVCWRQ+  G D+C LVAGGSDGVL+VFVGE++
Sbjct: 304 WGEAVWVEEFDRVGSGYGLVSSVCWRQV--GEDECTLVAGGSDGVLKVFVGEKK 353

[Close]

BLAST of Sed0022159 vs. NCBI nr
Match: XP_023554180.1 (WD repeat-containing protein RUP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.9 bits (1483), Expect = 2.6e-160
Identity = 287/353 (81.30%), Postives = 304/353 (86.12%), Query Frame = 0


Query: 20  ESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLL 79
           ES P R EW  SLASVV SSS I   SD LGVVEFDPSDSLIATAGIARKIRGY L  LL
Sbjct: 4   ESPPLRREWTFSLASVVSSSSLIGPVSDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL 63

Query: 80  PDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVP 139
           P  NDG VA+LDHTRA+EFCICTPAKLSSLRWKP A GRIL +GDYDGVVMEYDL++ VP
Sbjct: 64  P--NDGTVAMLDHTRASEFCICTPAKLSSLRWKPGAGGRILASGDYDGVVMEYDLEKKVP 123

Query: 140 VFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVC 199
           VFERDEHGGRRVWS+DYS VEP+VGASGSDDGTVQVWDTRCDG  CVA VQPS V SPVC
Sbjct: 124 VFERDEHGGRRVWSLDYSTVEPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSPVC 183

Query: 200 CVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTD 259
           CVEFNP+GGALVVVGCADR+AYGYDRRKMTEAVMV EGHAKTVTY+KFLDG T+VSASTD
Sbjct: 184 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFLDGGTIVSASTD 243

Query: 260 GSLKMWKTE----GGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKR 319
           GSLKMWK E    GG GA  VRTYEGHVN RSFVGLSVW NGGLIGCGSEDKRVFVYDKR
Sbjct: 244 GSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 303

Query: 320 WGEAIWVG--SGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGER 367
           WGEA+WV      GSG+GLVSSVCWRQ+  G D+C LVAGGSDGVL+VFVGE+
Sbjct: 304 WGEAVWVEEFDRVGSGYGLVSSVCWRQV--GEDECTLVAGGSDGVLKVFVGEK 352

[Close]

BLAST of Sed0022159 vs. NCBI nr
Match: XP_038887335.1 (WD repeat-containing protein RUP2-like [Benincasa hispida])

HSP 1 Score: 569.7 bits (1467), Expect = 1.8e-158
Identity = 284/371 (76.55%), Postives = 311/371 (83.83%), Query Frame = 0


Query: 6   PLQSQSQSP------NAQPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDS 65
           P   Q+Q+P        Q  E+TP RCEWD +LA++V SSSAI AASD LGVVEFDPSDS
Sbjct: 7   PNSPQNQNPEKQLHNKLQQNETTPPRCEWDFTLAALVSSSSAIGAASDTLGVVEFDPSDS 66

Query: 66  LIATAGIARKIRGYRLRTLLPDR-NDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGR 125
           LIATAGIARKIRGYRL  LLP+  ++G +  LDH+RA+EFCICTPAKLSSLRWKP  +GR
Sbjct: 67  LIATAGIARKIRGYRLHNLLPENIHNGTINQLDHSRASEFCICTPAKLSSLRWKPGVNGR 126

Query: 126 ILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDT 185
           ILG+GDYDGVVMEYDL+  VP+FERDEHGGRRVWSVDYS V+PVVGASGSDDGTVQVWDT
Sbjct: 127 ILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSMVDPVVGASGSDDGTVQVWDT 186

Query: 186 RCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGH 245
           RCDGG CVA VQPS V SPVCCVEFNP+GGALV VGCADR+AYGYDRRKM E V+V EGH
Sbjct: 187 RCDGGECVAVVQPSVVRSPVCCVEFNPYGGALVAVGCADRKAYGYDRRKMREPVVVFEGH 246

Query: 246 AKTVTYLKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGG 305
            KTVTY+KF+DG TVVSASTDGSLKMWKTE    A  VRTYEGHVN RSFVGLSVW NGG
Sbjct: 247 GKTVTYVKFVDGGTVVSASTDGSLKMWKTE---EARVVRTYEGHVNGRSFVGLSVWRNGG 306

Query: 306 LIGCGSEDKRVFVYDKRWGEAIWVG--SGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSD 365
           LIGCGSEDKRVFVYDKRWGE IWV      GSG+GLVSSVCWRQ+  G  +C LVAGGSD
Sbjct: 307 LIGCGSEDKRVFVYDKRWGEPIWVKEFDRVGSGYGLVSSVCWRQV--GEHECTLVAGGSD 366

Query: 366 GVLQVFVGERR 368
           GVLQVFVG++R
Sbjct: 367 GVLQVFVGQKR 372

[Close]

BLAST of Sed0022159 vs. NCBI nr
Match: XP_022971842.1 (WD repeat-containing protein RUP2-like [Cucurbita maxima])

HSP 1 Score: 568.9 bits (1465), Expect = 3.1e-158
Identity = 285/354 (80.51%), Postives = 306/354 (86.44%), Query Frame = 0


Query: 20  ESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLL 79
           E TP R EW  SLAS VVSSS I  ASD LGVVEFDPSDSLIATAGIARKIRGY L +LL
Sbjct: 4   EPTPLRREWSFSLAS-VVSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSSLL 63

Query: 80  PDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVP 139
           P  +DG VALLDH+RA EFCICTPAKLSSLRWKP   GRILG+GDYDGVVMEYDL++ VP
Sbjct: 64  P--HDGTVALLDHSRACEFCICTPAKLSSLRWKPGGGGRILGSGDYDGVVMEYDLEKKVP 123

Query: 140 VFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVC 199
           VFERDEHGGRRVWS+DYS V+P+VGASGSDDGTVQVWDTRCDG  CVA VQPS V SPVC
Sbjct: 124 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSPVC 183

Query: 200 CVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTD 259
           CVEFNP+GGALVVVGCADR+AYGYDRRKMTEAVMV EGHAKTVTY+KF+DG T+VSASTD
Sbjct: 184 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 243

Query: 260 GSLKMWKTE----GGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKR 319
           GSLKMWK E    GGA A  VRTYEGHVN RSFVGLSVW NGGLIGCGSEDKRVFVYDKR
Sbjct: 244 GSLKMWKAEEGGDGGARAGVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 303

Query: 320 WGEAIWVG--SGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGERR 368
           WGEA+WV      GSG+GLVSSVCWRQ+  G D+C LVAGGSDGVL+VFVGE++
Sbjct: 304 WGEAVWVEEFDRVGSGYGLVSSVCWRQV--GEDECTLVAGGSDGVLKVFVGEKK 352

[Close]

BLAST of Sed0022159 vs. ExPASy Swiss-Prot
Match: Q9FFA7 (WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.5e-118
Identity = 216/369 (58.54%), Postives = 269/369 (72.90%), Query Frame = 0


Query: 10  QSQSPNAQPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARK 69
           + Q   AQ  E    R EWD+SL++VV SSS  S+ASD++G +EFDP+D+++ATAGI+RK
Sbjct: 8   KQQQEQAQQQEEA--RYEWDLSLSTVVSSSS--SSASDVIGAIEFDPTDNIVATAGISRK 67

Query: 70  IRGYRLRTLLPDR--NDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDG 129
           IR Y L +LL +   +   V+ +D   A E+ ICTPAKLSSLRW+P + GR++G+GDYDG
Sbjct: 68  IRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYDG 127

Query: 130 VVMEYDLDRNVPVFERDEHGGRRVWSVDYS--AVEPVVGASGSDDGTVQVWDTRCDGGSC 189
           VVMEYDL++  PVFERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC     
Sbjct: 128 VVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEES 187

Query: 190 VAAVQPSAV-GSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTY 249
           V  V+P+ +  S VCCVEF+P GG  V VGCADR+ Y YD RK+ +  + L+GH KTV+Y
Sbjct: 188 VGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSY 247

Query: 250 LKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGS 309
           ++FLDG TVV+A TDG LK+W  E G     +RTYEGHVN+R+FVGLSVW NG L GCGS
Sbjct: 248 VRFLDGGTVVTAGTDGCLKLWSVEDGR---VIRTYEGHVNNRNFVGLSVWRNGALFGCGS 307

Query: 310 EDKRVFVYDKRWGEAIW------VGSGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGV 368
           E+ RVFVYD+RWG+ +W      VG   GS    VSSVCWRQ G   D+C LVAGGSDGV
Sbjct: 308 ENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGV--DQCTLVAGGSDGV 367

[Close]

BLAST of Sed0022159 vs. ExPASy Swiss-Prot
Match: Q9LTJ6 (WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-108
Identity = 202/364 (55.49%), Postives = 260/364 (71.43%), Query Frame = 0


Query: 9   SQSQSPNAQPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIAR 68
           S S SP     E+ P RC+WD+SL++VV   S+ S  SD +G +EFDP+  +IAT GIAR
Sbjct: 38  SSSSSPTIMNIENIP-RCDWDLSLSAVV---SSASTGSDAIGAIEFDPTGEIIATGGIAR 97

Query: 69  KIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGV 128
           KIR YRL +LL  R+       DH  A+E  ICTPAKLSSL+W+P   GR++G+GDYDGV
Sbjct: 98  KIRSYRLSSLLESRD-------DHVTASESYICTPAKLSSLKWRPDFSGRVIGSGDYDGV 157

Query: 129 VMEYDLDRNVPVFERDEHGGRRVWSVDYSAVE-PVVGASGSDDGTVQVWDTRCDGGSCVA 188
           V EYD+++ VPV ERDEHGGRR+WSVDY+     ++GASGSDDGTVQ+WD R +GG+   
Sbjct: 158 VTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEE 217

Query: 189 AVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKF 248
            V+P   G+ +C VEF+P GG+ + VGCADR AY YD R++ + ++VL+GH KTVTY +F
Sbjct: 218 TVRPGG-GAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARF 277

Query: 249 LDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDK 308
           +D  T+V+ STDGSLK W  + G     VRTY GHVNSR+FVGLSVW +GGL+  GSE+ 
Sbjct: 278 MDSHTIVTGSTDGSLKQWDIDNGRR--VVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENN 337

Query: 309 RVFVYDKRWGEAIWV-GSGYGSGFG----LVSSVCWRQMGYGSDKCMLVAGGSDGVLQVF 367
           +VFVYDKRW E +WV G G+ + FG     VSSVC RQ+    D C LVAGGSDG L++F
Sbjct: 338 QVFVYDKRWEEPVWVCGLGHTNRFGSDRRFVSSVCLRQV--DEDWCTLVAGGSDGALEIF 384

[Close]

BLAST of Sed0022159 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.2e-47
Identity = 112/328 (34.15%), Postives = 176/328 (53.66%), Query Frame = 0


Query: 45  ASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPA 104
           +++I+  +EFD  D L ATAG++R+I+ +    ++ +  D    +++ T        T +
Sbjct: 367 SANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMT--------TRS 426

Query: 105 KLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVG 164
           KLS L W   A  +I  + DY+G+V  + +     + E +EH  +R WSVD+S  +P + 
Sbjct: 427 KLSCLSWNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEH-EKRAWSVDFSRTDPSML 486

Query: 165 ASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYD 224
            SGSDD  V+VW T  +     A+V    + + +CCV++NP  G  + VG AD   + YD
Sbjct: 487 VSGSDDCKVKVWCTNQE-----ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYD 546

Query: 225 RRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVN 284
            R ++  V V  GH K V+Y+KFL  + + SASTD +L++W  +       VRT+ GH N
Sbjct: 547 LRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQN---LPVRTFRGHAN 606

Query: 285 SRSFVGLSVWSNGGLIGCGSEDKRVFVYDK---------RWGEAIWVGSGYGSGFGLVSS 344
            ++FVGL+V S    I CGSE   VFVY K         R+G      +   +G   +S+
Sbjct: 607 EKNFVGLTVRSE--YIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISA 666

Query: 345 VCWRQMGYGSDKCMLVAGGSDGVLQVFV 364
           VCW+     SD+  ++   S G ++V V
Sbjct: 667 VCWK-----SDRPTILTANSQGTIKVLV 669

[Close]

BLAST of Sed0022159 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-45
Identity = 109/328 (33.23%), Postives = 174/328 (53.05%), Query Frame = 0


Query: 45  ASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPA 104
           +++I+  +EFD  D L ATAG++R I+ +   +++ +  D    +++        + T +
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVE--------MSTRS 429

Query: 105 KLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVG 164
           KLS L W       I  + DY+G+V  +D+     + E +EH  +R WSVD+S  EP + 
Sbjct: 430 KLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPSML 489

Query: 165 ASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYD 224
            SGSDD  V+VW TR +     A+V    + + +CCV++NP     + VG AD   + YD
Sbjct: 490 VSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYD 549

Query: 225 RRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVN 284
            R +++ + V  GH K V+Y+KFL    + SASTD +L++W  +       VRT+ GH N
Sbjct: 550 LRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGHTN 609

Query: 285 SRSFVGLSVWSNGGLIGCGSEDKRVFVYDK---------RWGEAIWVGSGYGSGFGLVSS 344
            ++FVGL+V  N   + CGSE   V+VY K         R+G      +   +G   +S+
Sbjct: 610 EKNFVGLTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISA 669

Query: 345 VCWRQMGYGSDKCMLVAGGSDGVLQVFV 364
           VCW+     SD   ++   S G ++V V
Sbjct: 670 VCWK-----SDSPTMLTANSQGTIKVLV 672

[Close]

BLAST of Sed0022159 vs. ExPASy Swiss-Prot
Match: Q9LJR3 (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.5e-43
Identity = 112/330 (33.94%), Postives = 178/330 (53.94%), Query Frame = 0


Query: 45  ASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPA 104
           +S+++  + FD    L ATAG+ +KI+ +   +++ D  D    +++        +   +
Sbjct: 533 SSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVE--------LAGRS 592

Query: 105 KLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVG 164
           KLSSL W      +I  + ++DGVV  +D+ R+  V E  EH  +RVWS+D S+ +P + 
Sbjct: 593 KLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSADPTLL 652

Query: 165 ASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYD 224
           ASGSDDGTV++W    + G  +  ++  A    VCCV+F    G  +  G AD + Y YD
Sbjct: 653 ASGSDDGTVKLWS--INQGVSIGTIKTKA---NVCCVQFPSDSGRSLAFGSADHKVYYYD 712

Query: 225 RRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTDGSLKMW---KTEGGAGACAVRTYEG 284
            R     +  + GH+KTV+Y+KF+D  T+VS+STD +LK+W    +  G     + ++ G
Sbjct: 713 LRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTG 772

Query: 285 HVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKRWGEAI--WVGSGYGSGFGL------- 344
           H N ++FVGLSV  + G I  GSE   VFVY K +   +  ++ +   S  GL       
Sbjct: 773 HTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQ 832

Query: 345 -VSSVCWRQMGYGSDKCMLVAGGSDGVLQV 362
            +SS+CWR          LVA  S+G +++
Sbjct: 833 FISSICWR-----GQSSTLVAANSNGNIKI 840

[Close]

BLAST of Sed0022159 vs. ExPASy TrEMBL
Match: A0A6J1GKZ5 (WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC111455289 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 4.3e-161
Identity = 286/354 (80.79%), Postives = 308/354 (87.01%), Query Frame = 0


Query: 20  ESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLL 79
           ESTP R EW  SLASVV SSS I  ASD LGVVEFDPSDSLIATAGIARKIRGY L  LL
Sbjct: 4   ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL 63

Query: 80  PDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVP 139
           P  +DG VA+LDH+RA+EFCICTPAKLSSLRWKP A GRILG+GDYDGVVMEYDL++ VP
Sbjct: 64  P--HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVP 123

Query: 140 VFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVC 199
           VFERDEHGGRRVWS+DYS V+P+VGASGSDDGTVQVWDTRCDG  CVA VQPS V SPVC
Sbjct: 124 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVC 183

Query: 200 CVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTD 259
           CVEFNP+GGALVVVGCADR+AYGYDRRKMTEAVMV EGHAKTVTY+KF+DG T+VSASTD
Sbjct: 184 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 243

Query: 260 GSLKMWKTE----GGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKR 319
           GSLKMWK E    GG GA  VRTYEGHVN RSFVGLSVW NGGLIGCGSEDKRVFVYDKR
Sbjct: 244 GSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 303

Query: 320 WGEAIWVG--SGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGERR 368
           WGEA+WV      GSG+GLVSSVCWRQ+  G D+C LVAGGSDGVL+VFVGE++
Sbjct: 304 WGEAVWVEEFDRVGSGYGLVSSVCWRQV--GEDECTLVAGGSDGVLKVFVGEKK 353

[Close]

BLAST of Sed0022159 vs. ExPASy TrEMBL
Match: A0A6J1I327 (WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470535 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.5e-158
Identity = 285/354 (80.51%), Postives = 306/354 (86.44%), Query Frame = 0


Query: 20  ESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLL 79
           E TP R EW  SLAS VVSSS I  ASD LGVVEFDPSDSLIATAGIARKIRGY L +LL
Sbjct: 4   EPTPLRREWSFSLAS-VVSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSSLL 63

Query: 80  PDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVP 139
           P  +DG VALLDH+RA EFCICTPAKLSSLRWKP   GRILG+GDYDGVVMEYDL++ VP
Sbjct: 64  P--HDGTVALLDHSRACEFCICTPAKLSSLRWKPGGGGRILGSGDYDGVVMEYDLEKKVP 123

Query: 140 VFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVC 199
           VFERDEHGGRRVWS+DYS V+P+VGASGSDDGTVQVWDTRCDG  CVA VQPS V SPVC
Sbjct: 124 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSPVC 183

Query: 200 CVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTD 259
           CVEFNP+GGALVVVGCADR+AYGYDRRKMTEAVMV EGHAKTVTY+KF+DG T+VSASTD
Sbjct: 184 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 243

Query: 260 GSLKMWKTE----GGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKR 319
           GSLKMWK E    GGA A  VRTYEGHVN RSFVGLSVW NGGLIGCGSEDKRVFVYDKR
Sbjct: 244 GSLKMWKAEEGGDGGARAGVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 303

Query: 320 WGEAIWVG--SGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGERR 368
           WGEA+WV      GSG+GLVSSVCWRQ+  G D+C LVAGGSDGVL+VFVGE++
Sbjct: 304 WGEAVWVEEFDRVGSGYGLVSSVCWRQV--GEDECTLVAGGSDGVLKVFVGEKK 352

[Close]

BLAST of Sed0022159 vs. ExPASy TrEMBL
Match: A0A0A0LHK2 (Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 7.8e-155
Identity = 277/359 (77.16%), Postives = 296/359 (82.45%), Query Frame = 0


Query: 22  TPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPD 81
           TP RCEWD +LAS VVSS    AASD LGVVEFDPSDSLIATAGIARKIRGYRL  LLP 
Sbjct: 27  TPLRCEWDFTLAS-VVSSPTNCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQ 86

Query: 82  RNDGDVAL--LDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVP 141
             D +  +  LDHTRA++FCICTPAKLSSLRWKP A+GRILG+GDYDGVVMEYDL+  VP
Sbjct: 87  DIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVP 146

Query: 142 VFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVC 201
           +FERDEHGGRRVWSVDYS VEPVVGASGSDDGTVQVWDTRC+ G CVA VQPS V S VC
Sbjct: 147 IFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVC 206

Query: 202 CVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTD 261
           CVEFNP GG LV VGCADR+AYGYDRRKM E V+V EGH KTVTY+KF+DG TVVSASTD
Sbjct: 207 CVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTD 266

Query: 262 GSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKRWGEA 321
           GSLKMWKTE G GA  VRTYEGHVN RSFVGLSVW  GGLIGCGSEDKRVFVYDKRWGE 
Sbjct: 267 GSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEP 326

Query: 322 IW-----------VGSGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFVGERR 368
           IW           VG G GSG+GLVSSVCWRQ+  G  +C LVAGGSDGVLQVFVG ++
Sbjct: 327 IWVKEFDGGVGVGVGVGMGSGYGLVSSVCWRQV--GEQECTLVAGGSDGVLQVFVGHKK 382

[Close]

BLAST of Sed0022159 vs. ExPASy TrEMBL
Match: A0A5A7T553 (WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00140 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 4.3e-153
Identity = 274/364 (75.27%), Postives = 299/364 (82.14%), Query Frame = 0


Query: 10  QSQSPNAQPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARK 69
           Q+Q+P     + +P  CEWD +LAS VVSS    AASD LGV+EFDPSDSLIATAGIARK
Sbjct: 13  QNQNPEKLK-QQSPLPCEWDFTLAS-VVSSPTNCAASDTLGVLEFDPSDSLIATAGIARK 72

Query: 70  IRGYRLRTLLPD---RNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYD 129
           IRGYRL  LLP     N   +  LDH+RA++FCICTPAKLSSLRWKP A+ RILG+GDYD
Sbjct: 73  IRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYD 132

Query: 130 GVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCDGGSCV 189
           GVV EYDL+  VP+FERDEHGGRRVWSVDYS VEPVVGASGSDDGTVQVWDTRC+ G CV
Sbjct: 133 GVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECV 192

Query: 190 AAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLK 249
           A VQPS V SPVCCVEFNP+GG LV VGCADR+AYGYDRRKM E V+V EGH KTVTY+K
Sbjct: 193 AVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVK 252

Query: 250 FLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSED 309
           F+DG TVVSASTDGSLKMWKTE G GA  VRTYEGHVN RSFVGLSVW  GGLIGCGSED
Sbjct: 253 FVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSED 312

Query: 310 KRVFVYDKRWGEAIWV---GSGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGVLQVFV 368
           KRVFVYDKRWGE IWV     G GSG+GLVSSVCWRQ+  G  +C LVAGGSDGVLQVFV
Sbjct: 313 KRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQV--GEQECTLVAGGSDGVLQVFV 372

[Close]

BLAST of Sed0022159 vs. ExPASy TrEMBL
Match: A0A5C7IRB9 (WD_REPEATS_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005817 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.4e-132
Identity = 242/371 (65.23%), Postives = 284/371 (76.55%), Query Frame = 0


Query: 6   PLQSQSQSPNA---QPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIA 65
           P ++Q Q+ N    Q   +T  RCEWD +L S VVSS A  AA+D+LGV+EFDPSD+L+A
Sbjct: 23  PQRNQQQNTNTTREQEETTTTPRCEWDFNL-STVVSSHATGAATDVLGVIEFDPSDTLVA 82

Query: 66  TAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGA 125
           T GIARKIR Y + +LL     G VALLDH  A E+ ICTPAKLSSL+W+P + GR+LG+
Sbjct: 83  TGGIARKIRLYSVNSLLGGCGGGGVALLDHASACEYYICTPAKLSSLKWRPGSGGRVLGS 142

Query: 126 GDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVGASGSDDGTVQVWDTRCD- 185
           GDYDGVV EYDL+R VPVFERDEHGGRRVWSVDYS  +P VGASGSDDGT+Q+WD RCD 
Sbjct: 143 GDYDGVVTEYDLERKVPVFERDEHGGRRVWSVDYSMWDPAVGASGSDDGTMQMWDPRCDG 202

Query: 186 GGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKT 245
           GG+CVA VQPSA  S VCCVEFNP GGALV VGCADR+AYGYD RKM++ V+V +GH KT
Sbjct: 203 GGTCVATVQPSAARSSVCCVEFNPFGGALVAVGCADRKAYGYDVRKMSDPVIVFDGHKKT 262

Query: 246 VTYLKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIG 305
           VTY++FLDG T+VSA TDG LK+W T        +RTY+GHVNSRSFVGLSVW +GGL+G
Sbjct: 263 VTYIRFLDGNTLVSAGTDGCLKLWNTNDSR---TIRTYKGHVNSRSFVGLSVWRHGGLLG 322

Query: 306 CGSEDKRVFVYDKRWGEAIWVGSGYGS-----------GFGLVSSVCWRQMGYGSDKCML 362
           CGSE+ +VF+YD+RWGE IWV  G+ S           G G VSSVCWRQ+  G D C L
Sbjct: 323 CGSENNQVFIYDRRWGEPIWV-HGFESQLSRSAQLAETGTGFVSSVCWRQV--GDDHCTL 382

[Close]

BLAST of Sed0022159 vs. TAIR 10
Match: AT5G23730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 427.6 bits (1098), Expect = 1.0e-119
Identity = 216/369 (58.54%), Postives = 269/369 (72.90%), Query Frame = 0


Query: 10  QSQSPNAQPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIARK 69
           + Q   AQ  E    R EWD+SL++VV SSS  S+ASD++G +EFDP+D+++ATAGI+RK
Sbjct: 8   KQQQEQAQQQEEA--RYEWDLSLSTVVSSSS--SSASDVIGAIEFDPTDNIVATAGISRK 67

Query: 70  IRGYRLRTLLPDR--NDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDG 129
           IR Y L +LL +   +   V+ +D   A E+ ICTPAKLSSLRW+P + GR++G+GDYDG
Sbjct: 68  IRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYDG 127

Query: 130 VVMEYDLDRNVPVFERDEHGGRRVWSVDYS--AVEPVVGASGSDDGTVQVWDTRCDGGSC 189
           VVMEYDL++  PVFERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC     
Sbjct: 128 VVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEES 187

Query: 190 VAAVQPSAV-GSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTY 249
           V  V+P+ +  S VCCVEF+P GG  V VGCADR+ Y YD RK+ +  + L+GH KTV+Y
Sbjct: 188 VGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSY 247

Query: 250 LKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGS 309
           ++FLDG TVV+A TDG LK+W  E G     +RTYEGHVN+R+FVGLSVW NG L GCGS
Sbjct: 248 VRFLDGGTVVTAGTDGCLKLWSVEDGR---VIRTYEGHVNNRNFVGLSVWRNGALFGCGS 307

Query: 310 EDKRVFVYDKRWGEAIW------VGSGYGSGFGLVSSVCWRQMGYGSDKCMLVAGGSDGV 368
           E+ RVFVYD+RWG+ +W      VG   GS    VSSVCWRQ G   D+C LVAGGSDGV
Sbjct: 308 ENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGV--DQCTLVAGGSDGV 367

[Close]

BLAST of Sed0022159 vs. TAIR 10
Match: AT5G52250.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 394.8 bits (1013), Expect = 7.5e-110
Identity = 202/364 (55.49%), Postives = 260/364 (71.43%), Query Frame = 0


Query: 9   SQSQSPNAQPFESTPRRCEWDISLASVVVSSSAISAASDILGVVEFDPSDSLIATAGIAR 68
           S S SP     E+ P RC+WD+SL++VV   S+ S  SD +G +EFDP+  +IAT GIAR
Sbjct: 38  SSSSSPTIMNIENIP-RCDWDLSLSAVV---SSASTGSDAIGAIEFDPTGEIIATGGIAR 97

Query: 69  KIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPAKLSSLRWKPAADGRILGAGDYDGV 128
           KIR YRL +LL  R+       DH  A+E  ICTPAKLSSL+W+P   GR++G+GDYDGV
Sbjct: 98  KIRSYRLSSLLESRD-------DHVTASESYICTPAKLSSLKWRPDFSGRVIGSGDYDGV 157

Query: 129 VMEYDLDRNVPVFERDEHGGRRVWSVDYSAVE-PVVGASGSDDGTVQVWDTRCDGGSCVA 188
           V EYD+++ VPV ERDEHGGRR+WSVDY+     ++GASGSDDGTVQ+WD R +GG+   
Sbjct: 158 VTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEE 217

Query: 189 AVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYDRRKMTEAVMVLEGHAKTVTYLKF 248
            V+P   G+ +C VEF+P GG+ + VGCADR AY YD R++ + ++VL+GH KTVTY +F
Sbjct: 218 TVRPGG-GAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARF 277

Query: 249 LDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVNSRSFVGLSVWSNGGLIGCGSEDK 308
           +D  T+V+ STDGSLK W  + G     VRTY GHVNSR+FVGLSVW +GGL+  GSE+ 
Sbjct: 278 MDSHTIVTGSTDGSLKQWDIDNGRR--VVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENN 337

Query: 309 RVFVYDKRWGEAIWV-GSGYGSGFG----LVSSVCWRQMGYGSDKCMLVAGGSDGVLQVF 367
           +VFVYDKRW E +WV G G+ + FG     VSSVC RQ+    D C LVAGGSDG L++F
Sbjct: 338 QVFVYDKRWEEPVWVCGLGHTNRFGSDRRFVSSVCLRQV--DEDWCTLVAGGSDGALEIF 384

[Close]

BLAST of Sed0022159 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 2.0e-46
Identity = 109/328 (33.23%), Postives = 174/328 (53.05%), Query Frame = 0


Query: 45  ASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPA 104
           +++I+  +EFD  D L ATAG++R I+ +   +++ +  D    +++        + T +
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVE--------MSTRS 429

Query: 105 KLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVG 164
           KLS L W       I  + DY+G+V  +D+     + E +EH  +R WSVD+S  EP + 
Sbjct: 430 KLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPSML 489

Query: 165 ASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYD 224
            SGSDD  V+VW TR +     A+V    + + +CCV++NP     + VG AD   + YD
Sbjct: 490 VSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYD 549

Query: 225 RRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTDGSLKMWKTEGGAGACAVRTYEGHVN 284
            R +++ + V  GH K V+Y+KFL    + SASTD +L++W  +       VRT+ GH N
Sbjct: 550 LRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGHTN 609

Query: 285 SRSFVGLSVWSNGGLIGCGSEDKRVFVYDK---------RWGEAIWVGSGYGSGFGLVSS 344
            ++FVGL+V  N   + CGSE   V+VY K         R+G      +   +G   +S+
Sbjct: 610 EKNFVGLTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISA 669

Query: 345 VCWRQMGYGSDKCMLVAGGSDGVLQVFV 364
           VCW+     SD   ++   S G ++V V
Sbjct: 670 VCWK-----SDSPTMLTANSQGTIKVLV 672

[Close]

BLAST of Sed0022159 vs. TAIR 10
Match: AT3G15354.1 (SPA1-related 3 )

HSP 1 Score: 168.7 bits (426), Expect = 8.8e-42
Identity = 110/330 (33.33%), Postives = 173/330 (52.42%), Query Frame = 0


Query: 45  ASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPA 104
           +S+++  + FD    L ATAG+ +KI+ +   +++ D  D    +++        +   +
Sbjct: 533 SSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVE--------LAGRS 592

Query: 105 KLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVG 164
           KLSSL W      +I  + ++DGVV  +D+ R+  V E  EH  +RVWS+D S+ +P + 
Sbjct: 593 KLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSADPTLL 652

Query: 165 ASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYD 224
           ASGSDDGT          G  +  ++  A    VCCV+F    G  +  G AD + Y YD
Sbjct: 653 ASGSDDGT----------GVSIGTIKTKA---NVCCVQFPSDSGRSLAFGSADHKVYYYD 712

Query: 225 RRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTDGSLKMW---KTEGGAGACAVRTYEG 284
            R     +  + GH+KTV+Y+KF+D  T+VS+STD +LK+W    +  G     + ++ G
Sbjct: 713 LRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTG 772

Query: 285 HVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKRWGEAI--WVGSGYGSGFGL------- 344
           H N ++FVGLSV  + G I  GSE   VFVY K +   +  ++ +   S  GL       
Sbjct: 773 HTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQ 832

Query: 345 -VSSVCWRQMGYGSDKCMLVAGGSDGVLQV 362
            +SS+CWR          LVA  S+G +++
Sbjct: 833 FISSICWR-----GQSSTLVAANSNGNIKI 832

[Close]

BLAST of Sed0022159 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-41
Identity = 104/330 (31.52%), Postives = 169/330 (51.21%), Query Frame = 0


Query: 45  ASDILGVVEFDPSDSLIATAGIARKIRGYRLRTLLPDRNDGDVALLDHTRATEFCICTPA 104
           +S+++  + FD      ATAG+ +KI+ +   +++ D  D    +++        + + +
Sbjct: 483 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVE--------LASRS 542

Query: 105 KLSSLRWKPAADGRILGAGDYDGVVMEYDLDRNVPVFERDEHGGRRVWSVDYSAVEPVVG 164
           KLS + W      ++  + +++GVV  +D+ RN  V E  EH  +RVWS+DYS+ +P + 
Sbjct: 543 KLSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEH-EKRVWSIDYSSADPTLL 602

Query: 165 ASGSDDGTVQVWDTRCDGGSCVAAVQPSAVGSPVCCVEFNPHGGALVVVGCADRRAYGYD 224
           ASGSDDG+V++W    + G  +  ++  A    +CCV+F    G  +  G AD + Y YD
Sbjct: 603 ASGSDDGSVKLWS--INQGVSIGTIKTKA---NICCVQFPSETGRSLAFGSADHKVYYYD 662

Query: 225 RRKMTEAVMVLEGHAKTVTYLKFLDGETVVSASTDGSLKMWKTE---GGAGACAVRTYEG 284
            R     +  + GH KTV+Y++F+D  T+VS+STD +LK+W       G     + ++ G
Sbjct: 663 LRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMG 722

Query: 285 HVNSRSFVGLSVWSNGGLIGCGSEDKRVFVYDKRWGEAIWVGS----------GYGSGFG 344
           H N ++FVGLSV  + G I  GSE   VFVY K +   +                     
Sbjct: 723 HTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQ 782

Query: 345 LVSSVCWRQMGYGSDKCMLVAGGSDGVLQV 362
            +SSVCWR          LVA  S G +++
Sbjct: 783 FISSVCWR-----GQSSTLVAANSTGNIKI 790

The following BLAST results are available for this feature:

BLAST of Sed0022159 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571808.1	5.2e-161	81.30	WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022952662.1	8.8e-161	80.79	WD repeat-containing protein RUP2-like [Cucurbita moschata]	[more]
XP_023554180.1	2.6e-160	81.30	WD repeat-containing protein RUP2-like [Cucurbita pepo subsp. pepo]	[more]
XP_038887335.1	1.8e-158	76.55	WD repeat-containing protein RUP2-like [Benincasa hispida]	[more]
XP_022971842.1	3.1e-158	80.51	WD repeat-containing protein RUP2-like [Cucurbita maxima]	[more]

BLAST of Sed0022159 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA7	1.5e-118	58.54	WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 S...	[more]
Q9LTJ6	1.1e-108	55.49	WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 S...	[more]
P93471	5.2e-47	34.15	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
P43254	2.8e-45	33.23	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
Q9LJR3	3.5e-43	33.94	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1	[more]

BLAST of Sed0022159 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKZ5	4.3e-161	80.79	WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1I327	1.5e-158	80.51	WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC1114705...	[more]
A0A0A0LHK2	7.8e-155	77.16	Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV...	[more]
A0A5A7T553	4.3e-153	75.27	WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5C7IRB9	2.4e-132	65.23	WD_REPEATS_REGION domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV...	[more]

BLAST of Sed0022159 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23730.1	1.0e-119	58.54	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G52250.1	7.5e-110	55.49	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G32950.1	2.0e-46	33.23	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G15354.1	8.8e-42	33.33	SPA1-related 3	[more]
AT1G53090.1	1.1e-41	31.52	SPA1-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 182..224 e-value: 0.3 score: 20.2 coord: 272..313 e-value: 0.88 score: 17.4 coord: 96..133 e-value: 180.0 score: 2.8 coord: 228..266 e-value: 2.3E-4 score: 30.5 coord: 35..74 e-value: 150.0 score: 3.3 coord: 136..177 e-value: 0.029 score: 23.5
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 145..177 e-value: 0.0067 score: 17.2 coord: 232..266 e-value: 0.006 score: 17.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 235..268 score: 10.608706
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 165..179 score: 8.770704
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 31..363 e-value: 8.0E-79 score: 267.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 235..268 score: 8.913786
IPR044616	WD repeat-containing protein RUP1/2	PANTHER	PTHR45389	WD REPEAT-CONTAINING PROTEIN RUP1	coord: 11..367
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 51..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022159.1	Sed0022159.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010224	response to UV-B
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding