Sed0022158 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTGGTTTATGCGAAGTGTAATTTGTTTATGATCATTTTCATGGTTGTTGGTGGGTTCTTCGTCCATGGGAATGATGGTGGTGGTTGGTTTGATGCCCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGTCTTGGTAAGTTCTATTTTTTTTTTTCCATTTTTTTATATTTGTGTATATGTGCAAATTGGGTTTGTTTGATAATTATTATAAAAATATTATCTCTTAATCCAATGTCAGTGACAAAACTATCTAATGTTGTGATAAATGTTGTGATGATCATCATCAACATATTTTATCAAGATGGTGACATTTTAGATATATTTTGATTTCTTTAACTTATATTAATTTGGGTTTCTTAATAATGTAATAAAAAAAACGTGACATTTCATCTAAAAAACAATTGACTATATAACTCACACATATAATAAATATTTTGAAGTTATACCATAAAAATATGATATCGTCAACATGAAGGAGTGAAAGATAAGAAGTATTATATAGGGGCTTTTTCATGGATATTAATAAATAAATAAATAATTCTTTCCACGGCACATTTCTTAAATTTATTCATTTGTCGCTAAAAAATATCCTAAGTTTGTAAAATTACCAAAAGACCCCTGCTTAAAACTCTCACACAAGATTTCATCCCACACAAACATTGTACACAACTTCTTTGTAAAAAAAAAAAAACCCTCCCAACACGATTTCTTCCCAATCATCGCAACTTCTCATCGCCGTCACCTTCGTCGGAACCACGTTCTTCGCTGTCAATCTCGCTGGCGGCTTCTCGGCTTTCTATTCTTCTTTTCTGTTCCCATTTTAGCATACTTTCTTCTATTCAACGAACGAGTTTGGGGCGGCGACAGAGTGCTTTGTCCGTGGCGTTCAGATGTTCGACAATTCGCCGCTTGCAGTGTTATCGGCGACGACGAAGGTGGAGGTGCTAAAGAGCATGGGGAAGACGTAGGGGTTCAACTGATAGAAACTGATAGACTTCTATCAGTTCCACTGATAGAATACTATCACTGCAAATTCACTTTGGTTCAGCTGATAGAAGTCTATCCGTTCCACTGATAGAAGACTGATAGAAGTCTATCAGTGGAACTAATAGCATTCTATCGGTCAAAGCTTGAAGAGGAAGAAGAAATAGCTTGAAGCTTGGAGAGGAACTCAAAAGAAAAAGGGTATATTTGGAAATTGAAAAAGAATGTAAAAAATCTACTATGCATGAATGTTTTTACAATTTGTGCTATAATTAAAATAGGTGGGCCAAAAAATGCTATCGGTAGAAAATTCCATATCTATATATATGTATGTATGTAATCACTTATACTAATGAGAAAGTTGCATGGGGTTTACATCTTCAACAAAAAAAAAAAGTTGCATGGGTTTTAACTTAGAGAAATGCATTTATATTTTATTTATGGGGCACAATTTTTTTTTTTGTTGATCTTTTTTTTTTAAATAATAAAAATAGATGCATTATATATGTAATAAATAATTGCTTGCAATGAGTAGACAAGTATTTTTCTTTTAACTAACTAATTTATATGTATTTTAAAATATAAGCTTTTAATTGTTCTAAAATTCTAAAATTATTATTAAACTACACAGTAACTATTTATAGTCTTTTTCTTGGTGTTAAAGGCCTACGATTTCCTAGTTGATAATATATATGAATTAAATTGGGCTAAATTCATTTTGACACTAACTTTTGTTTTATAAGATTTTATAAAAATAATGTTTGTTGCTCATATTTTAACTTTACTCAATAATATGTTTCCAATAATTAAAAAAATCCCAGTATATTAATCATACAGATATATACCGAGCAATTAAGTTAACATTCAAACACTATGCATGCATTTAATCATTTTCACGATCTCTTAATATAAAACAAATACATATTCATAAAAGGATGATTCAAGAATTTACGAAATAAAGTTCGTATTCATTAAAAATAAAAAACAAAACTTGTGTTTGTTATCATATCAATTTATTTGTAATAATGATGGGTATTTTATTTCTCAGGAGGAGCATGTGGTTACGACAACACATTCCACGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGTGCACTTTTCAGAGGCGGAGAGGCCTGCGGGGCTTGCTTCCTGGTCATTTGCAACTACAACGCCGACCCCAAGTGGTGCCTCCGCCGCCGCACCGTCACCGTCACCGCCACAAACTTCTGCCCCTCCAACAACAACGGCGGCTGGTGCGACCCTCCTCGTTCCCATTTCGACATGTCGTCACCTGCTTTTCTTACCATTGCTCGTCAAGGCAACGAAGGGATTGTCCCTGTCCTTTACAAGAGGTATAATACAAAACATATTCACATTTCATAGTTTTTTTTTGTTGGTTAAATTACAACAACTTTGTTCTAAAAAAAGTTAGAATTTGGCAAACAAAATTGTTTAAGTTTAATTTTTTTTTTTAAGATTACAATAATTGGGGGTGGAGGACTCGAACCAAGATCTCTAGTCATTGGACATACACTAGTGTCGATGACCAACTGTTCATGTTGACTTTAAAATTAGTTATCATGATTTAATAAAATCTAAAATATTGATTTAAAAAAAAATAATAAAATCCAAACTATAGTTTTTATAATTAATAATTATCATCCCATTAAGCGCAATTAGCTATTCTAATGTAAATGAGGTGATTCTTTTTATTTTATTGACAATGTTGATTCAATATTTCTGCACTTTTAAAAGAGCTGCTAAAATAATTTACAACTAATTTTTTATGAAATCAATTACTTAACCTACACGATTTTCATGAACACTTATTTATCACGTATTTTATTGATACCACCTAAAATTACTTAACCTATATAGTCATTTAAATCATGAACGATGAGAATTAAATAGTTTTAACGTGTATATATATATATATGTATTTCTTTTCTTTTTTTTATAACAGTTTTAACGTATATTTACTAAGTTAATTTACAGAGTAAAACTTGAAATAACAAAATATATATATATATATATATACACACATATATAACACGCTCTTACATCGAGTTACTAAGGAACAACCGTACACAAACATGTACTTTTTTATTAGATGATTGGAAGATTCATTAGCCACCCCACATAGAAGCTGTTTGTTTGACATATTTAGGTAGTTTTTGTGTTAAGGAGTTATGTTGAGGAGTTAAAAATTGAAAGTTGTGTCAAAAACTCGTTTGCGTGTAGTTTTTGTATGGAGGAATTAGAGTCAAAACCTTGTTTGGATATAAATTTATAAATGAGTAGTTATTTTTAGTAGTTAAAAAAGAAATGATTAAAAAAGAATGGTTGAAAATGAGTTATTTTGATTGATTTGAAAGTAATTATTAAAACTAAGTGGTTAGAAATGATTGAGTAGTTATAAATGAATAATTAAAAATGAATGGTTATAAATGAATGATTAAAAATGAATGGTTATAAATGAGAGTTATTTAATGAGGAGGAGTTAATAAAAACTCGTTTGGATGCAGGTTTTTAAGGAGGAGTTAATAAATCCTAGAACTAACTCCTCCCTAAATATGTCAAACAAACAGCCCCATATACTTTTATCTTAAAGACAAGGACATTTTTGTTTTACTTTTTATCGTTGAGCGTACATTTTCAACCTTTTCAAAGTTCAATTTAATCTTTTATTATTCCTTTAATAAAAATCTAAATTTGTTATCGAAAACTCAACAGTGTACATTGATGCTGCTTGAGCTATTGCTCTATTGGCAATATTTACGCCCTTTTGGTTAATCATTAATTTCAGTTTTCGCTAAAGATTTTCACTAATTAGGTAGATTAACAATTAGTATGCACGTTTGTTTTCGCTAAAGAAAAAAACGCATGCAAGTTTGTTAGTATTTGTAATAACTTTGTTAAAAATATTATCGAAGTACTAAAATATGATATTTTCTTTAATAAAAAATAGAACTTAAATAGATTGTTTGAAAATCTAAAGTTTAGATGGGTGAATGTAAGCCATGAAAATTTAATTACCAAAATTAAAGTTTAAAAAAGGTATCTGTATCGTGCTTTGTTTATGGAATTTTGAATATTATAATTTAATTGTTGAAGTTAATACATTTTCTTTGAAACTTTGAGCAACATTATCCAGTTAACCTGCATGTATCAAGATCTCGACAGAAAATTTGTCCCTTATTTTCTCTTTGAAATGTTGTTGGTTAAAGGGTAAGTTGTAGAAGAAAGGGAGGAGTTCGATTCACATTAAAAGGGCAATCAAACTTCAACATGGTGATGATATCCAACGTTGGTGGTAGTGGTGATGTGAAGGCTGCATGGGTCAAGGGGTCGAGGATGACGACGTGGATGCCGATGCACCGAAATTGGGGGGCGAACTGGCAAGCGAACGTCGACCTTCGAAGCCAAAGGATGTCATTTAAGCTCACTCTAGTTGATGGAACAACATTGGAGTTGTCCAATGTTGTTCCTTCCTCTTGGAGGTTTGGCCAGACATTTTCTTCCATGAATCAGTTTTCTTAG ATGGGATTGGTTTATGCGAAGTGTAATTTGTTTATGATCATTTTCATGGTTGTTGGTGGGTTCTTCGTCCATGGGAATGATGGTGGTGGTTGGTTTGATGCCCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGTCTTGGAGGAGCATGTGGTTACGACAACACATTCCACGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGTGCACTTTTCAGAGGCGGAGAGGCCTGCGGGGCTTGCTTCCTGGTCATTTGCAACTACAACGCCGACCCCAAGTGGTGCCTCCGCCGCCGCACCGTCACCGTCACCGCCACAAACTTCTGCCCCTCCAACAACAACGGCGGCTGGTGCGACCCTCCTCGTTCCCATTTCGACATGTCGTCACCTGCTTTTCTTACCATTGCTCGTCAAGGCAACGAAGGGATTGTCCCTGTCCTTTACAAGAGGGTAAGTTGTAGAAGAAAGGGAGGAGTTCGATTCACATTAAAAGGGCAATCAAACTTCAACATGGTGATGATATCCAACGTTGGTGGTAGTGGTGATGTGAAGGCTGCATGGGTCAAGGGGTCGAGGATGACGACGTGGATGCCGATGCACCGAAATTGGGGGGCGAACTGGCAAGCGAACGTCGACCTTCGAAGCCAAAGGATGTCATTTAAGCTCACTCTAGTTGATGGAACAACATTGGAGTTGTCCAATGTTGTTCCTTCCTCTTGGAGGTTTGGCCAGACATTTTCTTCCATGAATCAGTTTTCTTAG ATGGGATTGGTTTATGCGAAGTGTAATTTGTTTATGATCATTTTCATGGTTGTTGGTGGGTTCTTCGTCCATGGGAATGATGGTGGTGGTTGGTTTGATGCCCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGTCTTGGAGGAGCATGTGGTTACGACAACACATTCCACGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGTGCACTTTTCAGAGGCGGAGAGGCCTGCGGGGCTTGCTTCCTGGTCATTTGCAACTACAACGCCGACCCCAAGTGGTGCCTCCGCCGCCGCACCGTCACCGTCACCGCCACAAACTTCTGCCCCTCCAACAACAACGGCGGCTGGTGCGACCCTCCTCGTTCCCATTTCGACATGTCGTCACCTGCTTTTCTTACCATTGCTCGTCAAGGCAACGAAGGGATTGTCCCTGTCCTTTACAAGAGGGTAAGTTGTAGAAGAAAGGGAGGAGTTCGATTCACATTAAAAGGGCAATCAAACTTCAACATGGTGATGATATCCAACGTTGGTGGTAGTGGTGATGTGAAGGCTGCATGGGTCAAGGGGTCGAGGATGACGACGTGGATGCCGATGCACCGAAATTGGGGGGCGAACTGGCAAGCGAACGTCGACCTTCGAAGCCAAAGGATGTCATTTAAGCTCACTCTAGTTGATGGAACAACATTGGAGTTGTCCAATGTTGTTCCTTCCTCTTGGAGGTTTGGCCAGACATTTTCTTCCATGAATCAGTTTTCTTAG MGLVYAKCNLFMIIFMVVGGFFVHGNDGGGWFDAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNYNADPKWCLRRRTVTVTATNFCPSNNNGGWCDPPRSHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLKGQSNFNMVMISNVGGSGDVKAAWVKGSRMTTWMPMHRNWGANWQANVDLRSQRMSFKLTLVDGTTLELSNVVPSSWRFGQTFSSMNQFS Homology
BLAST of Sed0022158 vs. NCBI nr
Match: XP_023539200.1 (expansin-A12 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 473.8 bits (1218), Expect = 9.5e-130 Identity = 222/246 (90.24%), Postives = 230/246 (93.50%), Query Frame = 0
BLAST of Sed0022158 vs. NCBI nr
Match: XP_023002729.1 (expansin-A12 [Cucurbita maxima]) HSP 1 Score: 472.2 bits (1214), Expect = 2.8e-129 Identity = 221/246 (89.84%), Postives = 230/246 (93.50%), Query Frame = 0
BLAST of Sed0022158 vs. NCBI nr
Match: KAG6600731.1 (Expansin-A12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128 Identity = 222/254 (87.40%), Postives = 233/254 (91.73%), Query Frame = 0
BLAST of Sed0022158 vs. NCBI nr
Match: KAG7031371.1 (Expansin-A12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 466.8 bits (1200), Expect = 1.2e-127 Identity = 217/240 (90.42%), Postives = 226/240 (94.17%), Query Frame = 0
BLAST of Sed0022158 vs. NCBI nr
Match: XP_022942774.1 (expansin-A12-like [Cucurbita moschata]) HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127 Identity = 219/246 (89.02%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy Swiss-Prot
Match: Q9LDJ3 (Expansin-A12 OS=Arabidopsis thaliana OX=3702 GN=EXPA12 PE=2 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.1e-92 Identity = 153/226 (67.70%), Postives = 180/226 (79.65%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy Swiss-Prot
Match: Q9ZSI1 (Putative expansin-A17 OS=Arabidopsis thaliana OX=3702 GN=EXPA17 PE=2 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 3.8e-73 Identity = 122/230 (53.04%), Postives = 162/230 (70.43%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy Swiss-Prot
Match: O22874 (Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 4.6e-71 Identity = 131/252 (51.98%), Postives = 170/252 (67.46%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy Swiss-Prot
Match: Q4PR50 (Expansin-A15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA15 PE=2 SV=2) HSP 1 Score: 261.9 bits (668), Expect = 7.4e-69 Identity = 121/231 (52.38%), Postives = 162/231 (70.13%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy Swiss-Prot
Match: Q9C554 (Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.3e-68 Identity = 129/232 (55.60%), Postives = 159/232 (68.53%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy TrEMBL
Match: A0A6J1KRA2 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111496472 PE=3 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129 Identity = 221/246 (89.84%), Postives = 230/246 (93.50%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy TrEMBL
Match: A0A6J1FSB0 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111447709 PE=3 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 7.3e-128 Identity = 219/246 (89.02%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy TrEMBL
Match: A0A0A0L6M1 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_3G104900 PE=3 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 3.6e-127 Identity = 223/256 (87.11%), Postives = 234/256 (91.41%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy TrEMBL
Match: A0A5D3BST0 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00140 PE=3 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 7.6e-125 Identity = 214/240 (89.17%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of Sed0022158 vs. ExPASy TrEMBL
Match: A0A1S3BTH1 (Expansin OS=Cucumis melo OX=3656 GN=LOC103493334 PE=3 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 7.6e-125 Identity = 216/244 (88.52%), Postives = 227/244 (93.03%), Query Frame = 0
BLAST of Sed0022158 vs. TAIR 10
Match: AT3G15370.1 (expansin 12 ) HSP 1 Score: 340.1 bits (871), Expect = 1.5e-93 Identity = 153/226 (67.70%), Postives = 180/226 (79.65%), Query Frame = 0
BLAST of Sed0022158 vs. TAIR 10
Match: AT4G01630.1 (expansin A17 ) HSP 1 Score: 276.2 bits (705), Expect = 2.7e-74 Identity = 122/230 (53.04%), Postives = 162/230 (70.43%), Query Frame = 0
BLAST of Sed0022158 vs. TAIR 10
Match: AT2G40610.1 (expansin A8 ) HSP 1 Score: 269.2 bits (687), Expect = 3.3e-72 Identity = 131/252 (51.98%), Postives = 170/252 (67.46%), Query Frame = 0
BLAST of Sed0022158 vs. TAIR 10
Match: AT1G69530.1 (expansin A1 ) HSP 1 Score: 261.2 bits (666), Expect = 9.0e-70 Identity = 129/232 (55.60%), Postives = 159/232 (68.53%), Query Frame = 0
BLAST of Sed0022158 vs. TAIR 10
Match: AT1G69530.3 (expansin A1 ) HSP 1 Score: 261.2 bits (666), Expect = 9.0e-70 Identity = 129/232 (55.60%), Postives = 159/232 (68.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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