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Sed0022085 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAATTACTCATCGGTTCTAATACCAATTACTCGTAAAATCTACTATGGATGGTATTTGCATACTTTCAGATGGGTTTGGAAGGCTGCTCAAAAGCTCATTAGGCACTGGAAAATTGTTAGAGGAGATAATGCAAGGAAATTTTTTAAAATATAAATATAATTTTTTGAAATAGATAAATATCTTATTTTCTCATGTTGCTGATTAGGTTTCCTTATGATGATTGTGATTGATTGTATTTTTCATAGGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTGTAATTAAGCGTGTTATACGCATTCAAAATCGTGTTATTGTTGAGGGTAAAAACCTGGTAAGAAATGGTTTCCAAATTAGACAATTAATGGTTGCAACAGTTGTTTATGAGTCCCGTTACTAATATGGTTCCCTCAGCTGATTTTGAACTGCATCATTTTTATGATTTTAGCAGTTGCTCATGACATGAGCGTGTTAGTTCTATCATCAGTCATTCACTTATTTATGCTTCATACAGGTGAAGAAACATATTAAGCAAGGACAAGGCCATGAAGGTGGAATATTCACGGTTGAAGCTCCCCTCCATGTATCAAATGTTCAAGTTGTTGATCCAGTAACAGGGTTTGGACACGATCCACGACGGTTATTGGTTTTCAATGTTTTGCCTTGAACTACAGCATTTACGGACATTGTTCTTTTGCAGGAAGCCTTGTAAGATTGGTATTAGATACCTCGAAGATGGTTCTAAAGTACGAGTTTCAAGAGGAATTGGAGCCTCAGCTTCTATAATCCCTCGTCCAGAGATCTTAAAGATAAGGGCTACTCCCAGACCTACAGTTGGTATTGATCTAAAACCTATAGCCTTTTTTCTAATGAAAAATATGCCTATAACCCTTTTTATTTATATCTATTTGCTTTGCTATTATTTACATTTTCTTTTTCTTGTTTTCTAAATTTATATGCTCTTATGTGCTTCTGTGGCATTCCCATGAAGCTGGGCCTTTCCATTGTGATTCCATGTTATTATATAAATATTATTAATATTCTTATTCATTTTTCTTAATCATATAACTGTGTTAGTGTTGCTATTTTCTTATTAGAGCTTGTATTGGTATTGGCGTGTCATCAATGAGCCAAACTAACGTTTAGTACCTTGCAAATATTCACATGCCCTCTCTCATAAAATAAGTGTTCTGCTGATTGTATACTTTATTTTTAGGATGCTGATTGTATCATTTAAGTTGTATTACTTGGTCAGCATTTTTTTGTGCGCTCTCTTTCTCAGTTTAGTAGGTACTACCTTACTAGGACTATGAATAGAGTGCTACACAGCTGTTGTAAATGTATTGAAGTTAGTACATCAGTAAAAAGTTGTGTCGTCTTAATTACAAAACCTTTTCTTGGCATTAAATCTCTGAAAAGAGAGATTTTGTTATGAGAATGGGGCCTATTTAGTTGGCTGCTAGAGGAGCTGCGAGGAAAAGTTGTAAATATGGTTAAAGATGCAAGTCATCTTTGATCATTTTGAGTTATTGTTGTTTAGATTATAGTTTGGCTAGATCCACTCAATCAACAACAGATGAACTTCTTATTGGTAGGATTGGGCGTTGAATATATTGTTTTTGTAGTTGCATTAGATACAAGATGGGATTCTCCTTTAGTGGAAGGCATCTAAATGTGCTGCTTAGATTTGACCAGAGTCTTAAAGAGGAAAAAAAGAACTCATTGCATGCAATGCAACATAGACTTTATGCATAATTCTTCTACCTTGGACGTATCTCAATCACTCCAATCTTCAATCTGGTCAGAAGAAATCAATAGACTCTAGCTCTCGTTTACACTAGCGTAACAGACAACCCTAGGCACTTCGTTGGCACATGAAATTCGATATAATTCTGTAAATTTTTCTATGGAAGTTCTGCCTCAAGTAATTATACTACGTCTGCTGTGCTGGTCCTTATGATATGATCGTATTTGTCGATTTGCAGGTGGTCCCAAAGATACTCCAATGGATGTGGTGATGGAGAAAACTTATGATGCTAAAACGGGAAAGGGTATGCCGAACCTTTAA ATGTCTAATTACTCATCGGTTCTAATACCAATTACTCGTAAAATCTACTATGGATGGTATTTGCATACTTTCAGATGGGTTTGGAAGGCTGCTCAAAAGCTCATTAGGCACTGGAAAATTGTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTGTAATTAAGCGTGTTATACGCATTCAAAATCGTGTTATTGTTGAGGGTAAAAACCTGGTGAAGAAACATATTAAGCAAGGACAAGGCCATGAAGGTGGAATATTCACGGTTGAAGCTCCCCTCCATGTATCAAATGTTCAAGTTGTTGATCCAGTAACAGGGAAGCCTTGTAAGATTGGTATTAGATACCTCGAAGATGGTTCTAAAGTACGAGTTTCAAGAGGAATTGGAGCCTCAGCTTCTATAATCCCTCGTCCAGAGATCTTAAAGATAAGGGCTACTCCCAGACCTACAGTTGGAAAAGTTGTAAATATGGTTAAAGATGCAAATTTGACCAGAGTCTTAAAGAGGAAAAAAAGAACTCATTGCATGCAATGTGGTCCCAAAGATACTCCAATGGATGTGGTGATGGAGAAAACTTATGATGCTAAAACGGGAAAGGGTATGCCGAACCTTTAA ATGTCTAATTACTCATCGGTTCTAATACCAATTACTCGTAAAATCTACTATGGATGGTATTTGCATACTTTCAGATGGGTTTGGAAGGCTGCTCAAAAGCTCATTAGGCACTGGAAAATTGTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTGTAATTAAGCGTGTTATACGCATTCAAAATCGTGTTATTGTTGAGGGTAAAAACCTGGTGAAGAAACATATTAAGCAAGGACAAGGCCATGAAGGTGGAATATTCACGGTTGAAGCTCCCCTCCATGTATCAAATGTTCAAGTTGTTGATCCAGTAACAGGGAAGCCTTGTAAGATTGGTATTAGATACCTCGAAGATGGTTCTAAAGTACGAGTTTCAAGAGGAATTGGAGCCTCAGCTTCTATAATCCCTCGTCCAGAGATCTTAAAGATAAGGGCTACTCCCAGACCTACAGTTGGAAAAGTTGTAAATATGGTTAAAGATGCAAATTTGACCAGAGTCTTAAAGAGGAAAAAAAGAACTCATTGCATGCAATGTGGTCCCAAAGATACTCCAATGGATGTGGTGATGGAGAAAACTTATGATGCTAAAACGGGAAAGGGTATGCCGAACCTTTAA MSNYSSVLIPITRKIYYGWYLHTFRWVWKAAQKLIRHWKIVRGDNVMIIRGKDKGETGVIKRVIRIQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKIGIRYLEDGSKVRVSRGIGASASIIPRPEILKIRATPRPTVGKVVNMVKDANLTRVLKRKKRTHCMQCGPKDTPMDVVMEKTYDAKTGKGMPNL Homology
BLAST of Sed0022085 vs. NCBI nr
Match: XP_022146016.1 (uncharacterized protein LOC111015327 [Momordica charantia] >XP_022146017.1 uncharacterized protein LOC111015327 [Momordica charantia]) HSP 1 Score: 288.9 bits (738), Expect = 3.6e-74 Identity = 146/183 (79.78%), Postives = 152/183 (83.06%), Query Frame = 0
BLAST of Sed0022085 vs. NCBI nr
Match: XP_022931187.1 (uncharacterized protein LOC111437445 [Cucurbita moschata] >XP_022931188.1 uncharacterized protein LOC111437445 [Cucurbita moschata] >XP_022996037.1 uncharacterized protein LOC111491363 [Cucurbita maxima] >XP_022996038.1 uncharacterized protein LOC111491363 [Cucurbita maxima] >XP_023534268.1 uncharacterized protein LOC111795875 [Cucurbita pepo subsp. pepo] >XP_023534269.1 uncharacterized protein LOC111795875 [Cucurbita pepo subsp. pepo] >KAG6606417.1 hypothetical protein SDJN03_03734, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 288.5 bits (737), Expect = 4.6e-74 Identity = 145/183 (79.23%), Postives = 152/183 (83.06%), Query Frame = 0
BLAST of Sed0022085 vs. NCBI nr
Match: XP_038889029.1 (50S ribosomal protein L24 [Benincasa hispida] >XP_038889030.1 50S ribosomal protein L24 [Benincasa hispida]) HSP 1 Score: 288.5 bits (737), Expect = 4.6e-74 Identity = 147/183 (80.33%), Postives = 151/183 (82.51%), Query Frame = 0
BLAST of Sed0022085 vs. NCBI nr
Match: MBA0687887.1 (hypothetical protein [Gossypium aridum]) HSP 1 Score: 286.6 bits (732), Expect = 1.8e-73 Identity = 141/185 (76.22%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of Sed0022085 vs. NCBI nr
Match: XP_030497980.1 (uncharacterized protein LOC115713450 [Cannabis sativa]) HSP 1 Score: 285.8 bits (730), Expect = 3.0e-73 Identity = 140/183 (76.50%), Postives = 153/183 (83.61%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy Swiss-Prot
Match: Q4UMR8 (50S ribosomal protein L24 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=rplX PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.3e-22 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy Swiss-Prot
Match: Q9ZCR6 (50S ribosomal protein L24 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=rplX PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.3e-22 Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy Swiss-Prot
Match: C3PP96 (50S ribosomal protein L24 OS=Rickettsia africae (strain ESF-5) OX=347255 GN=rplX PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.6e-22 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy Swiss-Prot
Match: Q92GX7 (50S ribosomal protein L24 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=rplX PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.6e-22 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy Swiss-Prot
Match: A8F2D6 (50S ribosomal protein L24 OS=Rickettsia massiliae (strain Mtu5) OX=416276 GN=rplX PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.6e-22 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy TrEMBL
Match: A0A7N2QYF4 (KOW domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74 Identity = 149/215 (69.30%), Postives = 163/215 (75.81%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy TrEMBL
Match: A0A6J1CYB5 (uncharacterized protein LOC111015327 OS=Momordica charantia OX=3673 GN=LOC111015327 PE=3 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.7e-74 Identity = 146/183 (79.78%), Postives = 152/183 (83.06%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy TrEMBL
Match: A0A6J1K0T3 (uncharacterized protein LOC111491363 OS=Cucurbita maxima OX=3661 GN=LOC111491363 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74 Identity = 145/183 (79.23%), Postives = 152/183 (83.06%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy TrEMBL
Match: A0A6J1EXQ8 (uncharacterized protein LOC111437445 OS=Cucurbita moschata OX=3662 GN=LOC111437445 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74 Identity = 145/183 (79.23%), Postives = 152/183 (83.06%), Query Frame = 0
BLAST of Sed0022085 vs. ExPASy TrEMBL
Match: A0A7J8XKR1 (KOW domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_005706 PE=3 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 8.5e-74 Identity = 141/185 (76.22%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of Sed0022085 vs. TAIR 10
Match: AT5G23535.1 (KOW domain-containing protein ) HSP 1 Score: 265.8 bits (678), Expect = 3.0e-71 Identity = 132/183 (72.13%), Postives = 144/183 (78.69%), Query Frame = 0
BLAST of Sed0022085 vs. TAIR 10
Match: AT5G54600.1 (Translation protein SH3-like family protein ) HSP 1 Score: 69.3 bits (168), Expect = 4.1e-12 Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of Sed0022085 vs. TAIR 10
Match: AT5G54600.2 (Translation protein SH3-like family protein ) HSP 1 Score: 48.9 bits (115), Expect = 5.8e-06 Identity = 30/106 (28.30%), Postives = 47/106 (44.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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