Sed0022064 (gene) Chayote v1

Overview


Name	Sed0022064
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-H2 finger protein ATL74-like
Location	LG03: 3612989 .. 3618482 (+)
RNA-Seq Expression	Sed0022064
Synteny	Sed0022064

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAATTTAAGTCTAAATACAGTGGTGGATTTTGGGGTTCTCTCTCAATCTCAATCTCAATCTCAAAATTCTCCAGATGGGTTTTTCCATTTTAGTGTTTTATCAATTCCCATTTCTTCCACCATGGATTCAATCTTTTTCTCTGGGAATTTTGTTCTCTCTCCCACAATAAAACAGTCCCTTTCAGATATGGACACCCACCAGTTTAGTTGAGCCCTCCCACTTTCCTGCAAATTCTTTCAAAATTTCAGCCTCTTTTTTCCATTCCCCAACTGGGTTCTGGCGTTTTCTTGGCATGATTCACCACGGGATTACAATTTCTTCTTCTTTCAAAATCTTGAGTTTCGATTTGTGCAGAAAGTGAAACTGGGTGTTTGGAGAATGATGTCTTCGGGGCTTAATTTGGTGATGACTGTGATTGGGTTTACTGTGAGCACTTTGTTCATCGTGTTCGTTTGCACCAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCTCGGCGATCTTTTCCAATTGCTTCTAGATCTGATCTCAGTGGGGTGAGCTTGTTTTTCTTGTGTTTACTTTGCTTCCAGATTTGATGTATGAATACTTTTTTTTTCCCTTCAACTTTGTTCTGGTTTTGTTGATTTTCGTTTTTGTTACTCGCCAAAAGGAAAAGGGGAGCTGATTTCCCTTCTACTTCTCCCTTTTTTGTTTGCTTTTCTGGGTTTAATTTCGTATGCTGATTAATGAGCCATATTTTTCGCTAGAAAGTGGATTTAATATGATTGTGCCACCACTTAGAAACTTGCCTTTCTTCCAACCATACTTGAGTGACCTAGTGGTAACAAATAGGTAAGAGTTATGAGTTCAATTACAGTACCCACCTACCTAAGAATCGTTTTTCTTAACATCTAAATGTTGTAGGGCGAGAAAGTTGTGAAAATAGTCAAGGTTTGGACCTTCACGGATATCAAAGTAAAAAATTGCCTTTCTTCCATTTTAATGTAGTTTCTGCATTCATTTCATATAGGATGCATTTGAAGCAACTATTGTGTTATTGCAAACAGTGAATTATTATTTTAATTATTTGAGAAGTGGGTAAGTTATTATTACAAGAGTGAGGATAAATTGTGTTTGGAGTGTATGTTATTATAACATGAGATTATCACACCATAGAGCTTTATGATAGATGAGTTACTGTAACTGGCAGCCCAAACACGAGTTGGGTTATTATAACTCAACCTAAACCATCCTTAATGGAAGCTCAAATGCCCCCATAGTGGTTTTACTCCAGAAATCATGCTGTTTAGTTGTGTACGTTTGTTGATGCAATTTCTTGATAGCCTTTTTGCGTTATTGCTTTCAGTCAACTACCGATGAATTGGGAGGTTAGACAGAAATAAAAAGGGTCTTGTTTGCTCTTATAGGCAGTGGTTGTCCATTTGCTATTTCACATGGACTTGTCTATTCATTTCTTTTTAATATACCTTTTTTTTATGCTTTATGCGGATATGATTGTGGACATCACTTTATTTACACATCGAATTTCTTTGTTCCAGCTGGAATGGGGATTACATGGTGTAGAGCCTTTTGTTGTAGATAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCATCTATGAGAAATGCTCAGTATGTGCTCCTTCATTTTACAGTTTCTCACTGCTCTGGTTTTCGTGATTTCTTCAGAAAATCCCTTTATATGAAATAAAAATATTTATCATCATCCGTAAGAGAAATTTTTTATTGAATAGAAATGAAATAGGTTGATATTTGTTTCCCGTGGATAACATTCTATTATGGCGTCTTTGAAAAGTTTGGATGGTGTACTAATATTTTTTAATTTAAAGTATAAGGGGGTGTTTGTTTGACGTAATTATCGAGCTATTATAAATGAGGTTTTACACAATTTCTCTTCAAACAATCACATCCAAACGACCTATGTAATCACTCAAAATAATCACTCATTTCTAACCATTCAAAATATTATTTATTTCTAACCACTCATTTCTAATCATTCATTTATTTCTAACCACTTATTTGTAACCGCTCAAAATAATCACTCATTTCTAGCTACATCCAAACGAGCTATTGTTTGCAACTCCTCTACAAAAATTATCATCCAAACAAGCTATTAATTGCAACTCCTCTACAAATATTAACATTCAAATGAGTTATTATTAGCATTCAAATTTCTTATCACTCAAAATAATTACTTGACAATTCCACATTCAAACACCCATCATAGTTGAAATGATCAAGAGGACCTTAGGAAACTTAGAGGTTATGTGTTCAATCCATGGTAACCACATAACAAGAAATTAACTTCTTATGGATTACCTTGACAACCAAATGTTGTTGGGTTAGGTAGTTGTCCCAAAAGAATAGTTGGTTCGGACACTGATAGATCTAGAAAAAAAGTTTGGATGGCGTACTAACATTTTAAAATTTATAGTATAATGGTTTAACGATGAATGGAGAGAAAAGGGTGACCAAGTGTTTCCCTTATGGTCTTGTAGTTAATTGGTTTTTCCCTGAGCATAATCATTTGTAAATATTGGGTGGTAGGATGAGATGTCACAAACCATATATTTAGCCCTGACACACTGATGAGGTAGAAAAGCAAAAAAGTAACAAACAGATTGGGCCATGTTTGAATTGCTTATGAGAGTGATAAGTGCCCTCTTAAAAATTTCTCCAAAAGTTAGTAAAATGGTGATTTTTGTATGAGACATTATGGCAACTTTGCTTAAAACATAGTCCTAAATCCTAATCACCCTGGGCCCTTAGCAGTTGATGTGCAAAAAGGAGTTACTTGTTAAAAGCTTGTACGATTTGCAACAAATGATAATGTGTTAATGGAGTGTCCTCTTTCTCTCTCTTGAATTCATCTACTAACTATTCAAGATGTGATAATTGCATCTTGGCATGAAGGTGGTGGTAACCCATATGTTTTTGTCAAAGTGGACCTGATTCATTCTGCTTTGTAGCTTTCTTATGATCTTTATTAAACAGGATCTTGTACAGTATTGAATTCTCTTTAACTTGAGTATAAATAAAATGAAGTAAAACTTCATTCAAGCCTTCAGAATTAACTTATTGAGGCTAAAAATGTCTTTGATGGGTTCAACTATAGGAGGCTTTGCATATCTTCTTTGCTTCTAGATCTCATGTCCCTTGTAATAGCAAGTAAAATCCTCCATAGATTTTACAAGCCCTATCCCTTTTCCTACCATACACTTTCACAATAGGAGGTCTACCAACAATATAAATGAAAAAAATTTGGAATTTAACTTTACAGTTAGGACTTCTGTTTGGCACTTTTGGGTAACATCAGATTTTGGAAAGGGGAGGTAATTTTCTCCTGACTCCTCTTCAGTCCTCTGGTAATGCTGTTGAAAACATGAGGCAACATAATAGGCAGGCACACCTGACATAGGGTTATAAGTTGTAAAATTACAGTTCACATGCTTTAGTCTATTGAGCTAGGTATAGAAAATCTAATACACCGTCTTTGAATATTGAAGTGGTCAGAGACTCTGCTGTGACATTACTCCTTCGAAGCCTCCCGGTGTCTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAGAATATTGAAGTGGTCCCAGTCTGATTGGTGATGGCATAAAAGTGTAAAAGGTATCATGAATGCACGAGCATGGCCATGGATACTATCTGAGCGTTCTTATGAATGTGGAGAGATTTCTGGAGAGCAACATTCCTGAATCTCTCACTTGTAGATTCTCACTTAAGTAACAGTATTGTGCACGGTTTTGTCACGTTCTTTCGGTGTTAGAAAAGATGAGAGGGGTTTCTTTTTTTCTTTTTTTTTTCTGGGGGAAACAAGGTGAATCTCCAATTCTAGTCCAAAAATTTATTGTCTTTATGCTACCTTTTGTTGACAGTTCTAGAGGGAAGCTAAAGGATAATTTTTAAACTAGAGATTTAATTCCTTTGCAGGCCATTTGGTTTTGTCCTCCATGGTTGTTTAGCAAGTCATAGAAATTATAAATAACGATGTGCAGTTGAAAAATATTGCGAGTTCAAAAACCAAAGCATCGCTTCCTTTCACTCTGGCTTTATGGCTTTTGTAGTTTAAGCACTTTCTCTGAAGTTTGATCCTTTTCAACAGATTTGAAATATAGATTGAGAGATGGTTACTGGTTAGTTAGATAAAAATAAGATTTTGTTATCTACCATCATCCATCTTCCCTGTAGTTTAGCAAATTTAAATGCTATCCATAGCTTTCCTATATAACCCTTGGATATTAAATCCACAACTATGCATACTAGGCAGAAATTAAGGATCTCCTCTTGAAAGTTAAAGCTAAAGGTCACTTTAAATGCGAAGAATGTTCGTGCAAATATCGACTGCAATTGCTTGTGTGATTCTGTAACTGGCATGGCTCTACTTGGAATGATATAGAACTGCCAAGTGCTAAGATTGTTATATGTATGACTGTGCAAAAAAAAAAAAAAAGAGATCGTTATATATGAAGTTTTTCATCTTTTCCTTATCATAAGGATAAATCATCGAACTGGTTGGTTGTTTATTTTGATGTATATAAAATAGCATTTGATAATTAATACTTTTTCTAATTGGAACTTGTTTCTTTTCTTCTGATTATCGAGTAATGTCTTTCTCTCTACATTCTTTGAGACGGAATTCATACTAAAAAGTTAAAGGAATAAGAAGTTTTGAAATCAAGCTTACTGGGTTGCTAAAATTTAGTCGATTGATTTTGGCTTTCACCAGAATATGACAACACAAATCTTCTAGTCCTATTATTACATAGCAGCTAAATTAGATTGTGTTAAAAATTGGCAGATGTACAGTTTGCTTAGCAGATTATCACAGTGAAGACTTGTTGCGCATTCTCCCCTACTGTGGACACTCATTCCATGTGACCTGCATAGACATATGGCTGCATCAGCATTCAACATGCCCAGTTTGTCGTATATCATTACGTGAGGTCCCGGACAAAAAACGAACGGTGCAACCGTTGTACAGTTCAGCCATTCGCTCTCATTACAACCTGGACTCAGATTTCTGTGCTCATCCTTGCAGCGGGTTCCCATTAAGAGACAGTGAAAACAGTGGATTGGAACCAATCCAAGAGAATCAGGCCAATGGAGCAGCGGATTCAATAGAGAATGCCTCCTCGTTTACGGAAGGTAACCAGAACAGTAAAGGTTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCTTGAGCTTCTCTGTTGTTTGCTTATGATAGGACTCTGGATTGGTACAGGCTGCCCTAAAAGTAGATGCCCTTAATTTATCTCCTTAGAAAGCTTGTCTGTGTTGTTGGTTACCAATGTAATCTGTATATAGGTGTTGTTTGTAGTGAAATAGTCTGTTGCTGGTTTTGAGCAGTTTTGTTTCATTTCTTCAGTACAACATTAATTACACCATGAACTTTGATTT

mRNA sequence

TTCAATTTAAGTCTAAATACAGTGGTGGATTTTGGGGTTCTCTCTCAATCTCAATCTCAATCTCAAAATTCTCCAGATGGGTTTTTCCATTTTAGTGTTTTATCAATTCCCATTTCTTCCACCATGGATTCAATCTTTTTCTCTGGGAATTTTGTTCTCTCTCCCACAATAAAACAGTCCCTTTCAGATATGGACACCCACCAGTTTAGTTGAGCCCTCCCACTTTCCTGCAAATTCTTTCAAAATTTCAGCCTCTTTTTTCCATTCCCCAACTGGGTTCTGGCGTTTTCTTGGCATGATTCACCACGGGATTACAATTTCTTCTTCTTTCAAAATCTTGAGTTTCGATTTGTGCAGAAAGTGAAACTGGGTGTTTGGAGAATGATGTCTTCGGGGCTTAATTTGGTGATGACTGTGATTGGGTTTACTGTGAGCACTTTGTTCATCGTGTTCGTTTGCACCAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCTCGGCGATCTTTTCCAATTGCTTCTAGATCTGATCTCAGTGGGCTGGAATGGGGATTACATGGTGTAGAGCCTTTTGTTGTAGATAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCATCTATGAGAAATGCTCAATGTACAGTTTGCTTAGCAGATTATCACAGTGAAGACTTGTTGCGCATTCTCCCCTACTGTGGACACTCATTCCATGTGACCTGCATAGACATATGGCTGCATCAGCATTCAACATGCCCAGTTTGTCGTATATCATTACGTGAGGTCCCGGACAAAAAACGAACGGTGCAACCGTTGTACAGTTCAGCCATTCGCTCTCATTACAACCTGGACTCAGATTTCTGTGCTCATCCTTGCAGCGGGTTCCCATTAAGAGACAGTGAAAACAGTGGATTGGAACCAATCCAAGAGAATCAGGCCAATGGAGCAGCGGATTCAATAGAGAATGCCTCCTCGTTTACGGAAGGTAACCAGAACAGTAAAGGTTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCTTGAGCTTCTCTGTTGTTTGCTTATGATAGGACTCTGGATTGGTACAGGCTGCCCTAAAAGTAGATGCCCTTAATTTATCTCCTTAGAAAGCTTGTCTGTGTTGTTGGTTACCAATGTAATCTGTATATAGGTGTTGTTTGTAGTGAAATAGTCTGTTGCTGGTTTTGAGCAGTTTTGTTTCATTTCTTCAGTACAACATTAATTACACCATGAACTTTGATTT

Coding sequence (CDS)

ATGATGTCTTCGGGGCTTAATTTGGTGATGACTGTGATTGGGTTTACTGTGAGCACTTTGTTCATCGTGTTCGTTTGCACCAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCTCGGCGATCTTTTCCAATTGCTTCTAGATCTGATCTCAGTGGGCTGGAATGGGGATTACATGGTGTAGAGCCTTTTGTTGTAGATAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCATCTATGAGAAATGCTCAATGTACAGTTTGCTTAGCAGATTATCACAGTGAAGACTTGTTGCGCATTCTCCCCTACTGTGGACACTCATTCCATGTGACCTGCATAGACATATGGCTGCATCAGCATTCAACATGCCCAGTTTGTCGTATATCATTACGTGAGGTCCCGGACAAAAAACGAACGGTGCAACCGTTGTACAGTTCAGCCATTCGCTCTCATTACAACCTGGACTCAGATTTCTGTGCTCATCCTTGCAGCGGGTTCCCATTAAGAGACAGTGAAAACAGTGGATTGGAACCAATCCAAGAGAATCAGGCCAATGGAGCAGCGGATTCAATAGAGAATGCCTCCTCGTTTACGGAAGGTAACCAGAACAGTAAAGGTTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCTTGA

Protein sequence

MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHGVEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHQHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEPIQENQANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA

Homology

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BLAST of Sed0022064 vs. NCBI nr
Match: XP_023524777.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 4.7e-109
Identity = 200/220 (90.91%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVC RLVCARIHLNASRRSF +ASRSDLSGLE G HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCARLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEPFVV NFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           +HSTCPVCR SLREVPDKKRT+QPL+SSAIRSHYNL+SD CA+PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENQANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           IQENQANGAAD IENASSFTEGN NSKGSRNKNVVSPSNA
Sbjct: 181 IQENQANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

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BLAST of Sed0022064 vs. NCBI nr
Match: XP_022960827.1 (RING-H2 finger protein ATL74-like [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 7.9e-109
Identity = 200/220 (90.91%), Postives = 209/220 (95.00%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLE G HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEPFVV NFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLLRILPYCGHSFHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           +HSTCPVCR SLREVPDKKRT+QPL+SSAIRSHYNL+SD CA+PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENQANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           IQENQANGAAD IENASSFTEGN NSKGSRNKNVVSPSNA
Sbjct: 181 IQENQANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

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BLAST of Sed0022064 vs. NCBI nr
Match: XP_022990455.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 402.5 bits (1033), Expect = 2.3e-108
Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSDLSGLE G HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLHASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEPFVV NFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           +HSTCPVCR SLREVPDKKRT+QPL+SSAIRSHYNL+SD CA+PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENQANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           IQENQANGAAD IENASSFTEGN NSKGSRNKNV SPSNA
Sbjct: 181 IQENQANGAADPIENASSFTEGNLNSKGSRNKNVESPSNA 220

[Close]

BLAST of Sed0022064 vs. NCBI nr
Match: KAG7032948.1 (RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.4 bits (1030), Expect = 5.1e-108
Identity = 199/220 (90.45%), Postives = 207/220 (94.09%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLE G HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEPFVV NFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGH FHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           +HSTCPVCR SLREVPDKKRT+QPL+SSAIRSHYNL+SD CA+PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENQANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           IQENQAN AAD IENASSFTEGN NSKGSRNKNVVSPSNA
Sbjct: 181 IQENQANEAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

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BLAST of Sed0022064 vs. NCBI nr
Match: KAG6602265.1 (RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.2 bits (957), Expect = 1.5e-99
Identity = 182/202 (90.10%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLE G HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEPFVV NFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGH FHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           +HSTCPVCR SLREVPDKKRT+QPL+SSAIRSHYNL+SD CA+PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENQANGAADSIENASSFTEG 203
           IQENQAN AAD IENASSFTEG
Sbjct: 181 IQENQANEAADPIENASSFTEG 202

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BLAST of Sed0022064 vs. ExPASy Swiss-Prot
Match: O64762 (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.2e-16
Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLEWGLHGVEPF 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVDNFPTKKYSD--EYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHQH 127
           ++++FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH  C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRISLREVPDKKRTVQP 145
           STCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

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BLAST of Sed0022064 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.1e-15
Identity = 39/101 (38.61%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 60  GVEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWL 119
           GV+  ++D  P   Y       +    C VCL ++ +ED LR+LP C H+FHV CID WL
Sbjct: 99  GVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 158

Query: 120 HQHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDF 161
             HSTCP+CR +L               S   SH+NL S +
Sbjct: 159 LSHSTCPLCRSNL--------------LSGFSSHHNLSSSY 185

[Close]

BLAST of Sed0022064 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 60  GVEPFVVDNFPTKKYSDEYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHSFHVTCIDI 119
           G++  VV+ FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH  CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQHSTCPVCRISLREVPDKKRTVQP 145
           WL  H TCPVCR +L E   +  +V+P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]

BLAST of Sed0022064 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-14
Identity = 48/131 (36.64%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLEWGLHGVEPFVVD 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGS--SNKGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHQHSTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL QH TCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLREVPDK 139
           CR  L E   K
Sbjct: 178 CRNCLVETCQK 186

[Close]

BLAST of Sed0022064 vs. ExPASy Swiss-Prot
Match: Q9C7I1 (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-14
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 60  GVEPFVVDNFPTKKYSDEYFSSM--RNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDI 119
           G+   V+++FP+  YS      +     +C +CL ++  E+ LR++P C H+FH +CID+
Sbjct: 99  GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158

Query: 120 WLHQHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSD 160
           WL   STCPVCR SL   P K  + Q      IR H N D D
Sbjct: 159 WLSSRSTCPVCRASL---PPKPGSDQNSLYPFIRPHDNQDMD 197

[Close]

BLAST of Sed0022064 vs. ExPASy TrEMBL
Match: A0A6J1H8I0 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.8e-109
Identity = 200/220 (90.91%), Postives = 209/220 (95.00%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLE G HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEPFVV NFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLLRILPYCGHSFHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           +HSTCPVCR SLREVPDKKRT+QPL+SSAIRSHYNL+SD CA+PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENQANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           IQENQANGAAD IENASSFTEGN NSKGSRNKNVVSPSNA
Sbjct: 181 IQENQANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

[Close]

BLAST of Sed0022064 vs. ExPASy TrEMBL
Match: A0A6J1JQ55 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSDLSGLE G HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLHASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEPFVV NFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           +HSTCPVCR SLREVPDKKRT+QPL+SSAIRSHYNL+SD CA+PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENQANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           IQENQANGAAD IENASSFTEGN NSKGSRNKNV SPSNA
Sbjct: 181 IQENQANGAADPIENASSFTEGNLNSKGSRNKNVESPSNA 220

[Close]

BLAST of Sed0022064 vs. ExPASy TrEMBL
Match: A0A6J1BZK6 (RING-H2 finger protein ATL38-like OS=Momordica charantia OX=3673 GN=LOC111006678 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.2e-98
Identity = 187/224 (83.48%), Postives = 196/224 (87.50%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF IASRSD +GLE GLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           +E F V NFPTKKYSDEYFSSMRNAQCTVCLADYH ED+LRILPYCGHSFHV CIDIWLH
Sbjct: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLEP 180
           QHSTCPVCR+SLRE PDKKR +QPL+SSAIRSHY L+S+ C HPC GFPLRD ENSGLEP
Sbjct: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180

Query: 181 IQENQ----ANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           IQEN     ANG ADS ENASSF EGN  SKGSRNKN V  SNA
Sbjct: 181 IQENHCSPGANG-ADSTENASSFVEGNSISKGSRNKN-VETSNA 222

[Close]

BLAST of Sed0022064 vs. ExPASy TrEMBL
Match: A0A5D3CKS4 (RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00660 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.4e-97
Identity = 191/225 (84.89%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLE GLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VV NFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLE- 180
           QHSTCPVCR+SLREV DKKRT+QPL+SSAIRS   L+SD    PC GFPLRD EN+GLE 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENQ----ANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           PIQEN     ANGA D IENAS F EGNQNSKG RNKNV SPSNA
Sbjct: 181 PIQENHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Sed0022064 vs. ExPASy TrEMBL
Match: A0A1S3C364 (RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.4e-97
Identity = 191/225 (84.89%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 1   MMSSGLNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLEWGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLE GLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120
           VEP VV NFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDFCAHPCSGFPLRDSENSGLE- 180
           QHSTCPVCR+SLREV DKKRT+QPL+SSAIRS   L+SD    PC GFPLRD EN+GLE 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENQ----ANGAADSIENASSFTEGNQNSKGSRNKNVVSPSNA 221
           PIQEN     ANGA D IENAS F EGNQNSKG RNKNV SPSNA
Sbjct: 181 PIQENHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Sed0022064 vs. TAIR 10
Match: AT2G34990.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.8e-17
Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLEWGLHGVEPF 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVDNFPTKKYSD--EYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHQH 127
           ++++FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH  C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRISLREVPDKKRTVQP 145
           STCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]

BLAST of Sed0022064 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16
Identity = 39/101 (38.61%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 60  GVEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWL 119
           GV+  ++D  P   Y       +    C VCL ++ +ED LR+LP C H+FHV CID WL
Sbjct: 99  GVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 158

Query: 120 HQHSTCPVCRISLREVPDKKRTVQPLYSSAIRSHYNLDSDF 161
             HSTCP+CR +L               S   SH+NL S +
Sbjct: 159 LSHSTCPLCRSNL--------------LSGFSSHHNLSSSY 185

[Close]

BLAST of Sed0022064 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 8.4e-16
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 60  GVEPFVVDNFPTKKYSDEYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHSFHVTCIDI 119
           G++  VV+ FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH  CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQHSTCPVCRISLREVPDKKRTVQP 145
           WL  H TCPVCR +L E   +  +V+P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]

BLAST of Sed0022064 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 60  GVEPFVVDNFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWL 119
           G++  V+ + P   +S E   S + A+C +CLA++ + D LR+LP CGH FHV CID WL
Sbjct: 84  GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWL 143

Query: 120 HQHSTCPVCR 130
             HS+CP CR
Sbjct: 144 GSHSSCPSCR 153

[Close]

BLAST of Sed0022064 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 48/131 (36.64%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLEWGLHGVEPFVVD 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGS--SNKGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHQHSTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL QH TCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLREVPDK 139
           CR  L E   K
Sbjct: 178 CRNCLVETCQK 186

The following BLAST results are available for this feature:

BLAST of Sed0022064 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524777.1	4.7e-109	90.91	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960827.1	7.9e-109	90.91	RING-H2 finger protein ATL74-like [Cucurbita moschata]	[more]
XP_022990455.1	2.3e-108	90.45	RING-H2 finger protein ATL74-like [Cucurbita maxima]	[more]
KAG7032948.1	5.1e-108	90.45	RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602265.1	1.5e-99	90.10	RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0022064 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64762	8.2e-16	29.58	RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1	[more]
Q9ZV53	4.1e-15	38.61	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q8RXX9	1.2e-14	41.38	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
P0C034	1.5e-14	36.64	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
Q9C7I1	1.5e-14	39.22	RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1	[more]

BLAST of Sed0022064 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8I0	3.8e-109	90.91	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 ...	[more]
A0A6J1JQ55	1.1e-108	90.45	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE...	[more]
A0A6J1BZK6	5.2e-98	83.48	RING-H2 finger protein ATL38-like OS=Momordica charantia OX=3673 GN=LOC111006678...	[more]
A0A5D3CKS4	4.4e-97	84.89	RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C364	4.4e-97	84.89	RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV...	[more]

BLAST of Sed0022064 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34990.1	5.8e-17	29.58	RING/U-box superfamily protein	[more]
AT2G18650.1	2.9e-16	38.61	RING/U-box superfamily protein	[more]
AT3G05200.1	8.4e-16	41.38	RING/U-box superfamily protein	[more]
AT1G20823.1	1.1e-15	47.14	RING/U-box superfamily protein	[more]
AT1G49220.1	1.1e-15	36.64	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 87..128 e-value: 1.2E-6 score: 38.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 86..129 e-value: 1.6E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 87..129 score: 12.40076
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 63..138 e-value: 2.7E-20 score: 73.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..220
None	No IPR available	PANTHER	PTHR47035	OS11G0150450 PROTEIN	coord: 1..219
None	No IPR available	PANTHER	PTHR47035:SF3	OS11G0150450 PROTEIN	coord: 1..219
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 86..129 e-value: 5.03655E-17 score: 69.9481
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 65..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022064.1	Sed0022064.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane