Sed0021966 (gene) Chayote v1

Overview


Name	Sed0021966
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LEA_2 domain-containing protein
Location	LG03: 12437637 .. 12439566 (+)
RNA-Seq Expression	Sed0021966
Synteny	Sed0021966

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAACACAAACTTAAAATAAAACCAAAACCAAAGCCAACAAACTTTGCTCAACAAAAAAACATAAGAAAAATGAGGTCTACAACAACAACAACAACAACAACAAAAGTACCAGATGGAGGAGCCTCGTCGTCATCATCGGCGTCGAAACAAACAACGACAGCGAACAGCCACGGGCCGAAGCGCACGAGGCTGATGAGAATCATAGGAAGAAGCTTGTTGGGATTAATGGTGCTTGTGGGGCTTGCCATAGTGATTTGTTGGCTTCTTGTTTTCCCCAAAACCCCAATTTTCACTGTGGAAAGTGGCCAAGTTACACCCCACAGCTTGACTGATAGGAAGCTCAATGCCACTGTAGCTTTCACTGTCAAGAGCTTCAACCCCAACAAAAGAGCTTCCATTCATGTTGACCATTTGGTCATGACTATGGACGAGATGGGCCAGAAGTTCCGAACCTCCGTCCCCACCTTCTCCCAAACCCCCGGTAACCAGACCGTCTTCAACCTAACCGCGCTCCTTCAGTTTTCTTACCCGTTCGGCGGCTTGGATGAGAGGGTGAAGTTGGACGGGATCAGTCCCGAGCTTCGCTTTTTCGCCGAAGTCAGGTACCCAAACACACATTTCTCACCTTTAACATCATTTATGTACACATGTATATATCATATAACTATGCCTTATGTTCAATGTTGTTATTAAGATACCCTTCCTTTCTTAACTATTTTGGTTTTAGTTTTAAGCTTTTTAAAACTAAACCTATTACTGCTACATTTACCTATTGTTATCTCCCTTTTGTGGATTGTTTTCAAAAACTATAAATAAATAGTTTTCAATAATAATAATAATAATAATTTTTATAATTTGGTTATAAATTTAGATATGAAAGTTTTTTTTTGAGACAATTTAGATATGAAAGTTGGCAAAATGAGTAGTATTTCAATAATGTTATTATTAAATAGTAATCAGTTGGCCATGTCATTTGATTTAAAAAAGAGATGATTAAAAAAAAGTTACCGTAAAGAAATTGACATAAAAATAATAATAATAATAAAAAAACTAATTGAATTTCTCAAATAAAGTTTCTAGGTTTAAATTAAAAAAATCTCATAAATTTTAAACTTTAATTTAAATAAGTTAAGTTAACCTATCTACTAAACCATCCTAGAGTGTTTAATGATCAAATAAAGTTTATAAAAATGTTAAAAATGATAAATTCAATTTATAATGACGGTTTACTTAAAAAATAATGGAGATATATGCAAACTAACTTAAACAGTTACAAATATACATATAAACTAAATTGAACAATCACGAATATATATATATATATATATAGAGAGAGTTAAATTGATATAAATGTATATCCATGACTAATTAAAAGGTCTAAGTTCACTGACTTTAATTAAGTGCTTACTAAACTTGAACACAATCATAAATATTTAGCTTCATCCTATCAAAAAAATAAAATAAATATATATATCCAATATTTTAAATGATAAGATTTAAGATATGTATATTTTAATTAATTTGTTATTGTAGTGTATATATAGCACATCCTTATACCCAAATTGTAATTTCCCCTCCAATTTTGCCATTAAAATTTCAAATTTCTATGATCAGTTACATTCTCGAGAGATGGACGTCAAAGCGTCGGACGGTGGAGATCTATTGCAACCACCTGAGGCTTAAGATCAATGGTACCACACCGTTGGATAATACCAAATGCAAAGTGGATCTTTGAGATTTCATCTCCATCACCCAAAAACATTGTAACTTCAAAGTTTCATCATATTTTGTGAGTTCAAATGATTTTTTATTTTAAAAAATAGAGATGTTTTTTTTTTCTTTCATTACATGTTTGATCTCTAGATTTTTCGAGTTTGTTCGAATAATGAAGAAGAGTGAAAAGAAATGATTGAAAAAGAAAGATGTG

mRNA sequence

CACAAACACAAACTTAAAATAAAACCAAAACCAAAGCCAACAAACTTTGCTCAACAAAAAAACATAAGAAAAATGAGGTCTACAACAACAACAACAACAACAACAAAAGTACCAGATGGAGGAGCCTCGTCGTCATCATCGGCGTCGAAACAAACAACGACAGCGAACAGCCACGGGCCGAAGCGCACGAGGCTGATGAGAATCATAGGAAGAAGCTTGTTGGGATTAATGGTGCTTGTGGGGCTTGCCATAGTGATTTGTTGGCTTCTTGTTTTCCCCAAAACCCCAATTTTCACTGTGGAAAGTGGCCAAGTTACACCCCACAGCTTGACTGATAGGAAGCTCAATGCCACTGTAGCTTTCACTGTCAAGAGCTTCAACCCCAACAAAAGAGCTTCCATTCATGTTGACCATTTGGTCATGACTATGGACGAGATGGGCCAGAAGTTCCGAACCTCCGTCCCCACCTTCTCCCAAACCCCCGGTAACCAGACCGTCTTCAACCTAACCGCGCTCCTTCAGTTTTCTTACCCGTTCGGCGGCTTGGATGAGAGGGTGAAGTTGGACGGGATCAGTCCCGAGCTTCGCTTTTTCGCCGAAGTCAGTTACATTCTCGAGAGATGGACGTCAAAGCGTCGGACGGTGGAGATCTATTGCAACCACCTGAGGCTTAAGATCAATGGTACCACACCGTTGGATAATACCAAATGCAAAGTGGATCTTTGAGATTTCATCTCCATCACCCAAAAACATTGTAACTTCAAAGTTTCATCATATTTTGTGAGTTCAAATGATTTTTTATTTTAAAAAATAGAGATGTTTTTTTTTTCTTTCATTACATGTTTGATCTCTAGATTTTTCGAGTTTGTTCGAATAATGAAGAAGAGTGAAAAGAAATGATTGAAAAAGAAAGATGTG

Coding sequence (CDS)

ATGAGGTCTACAACAACAACAACAACAACAACAAAAGTACCAGATGGAGGAGCCTCGTCGTCATCATCGGCGTCGAAACAAACAACGACAGCGAACAGCCACGGGCCGAAGCGCACGAGGCTGATGAGAATCATAGGAAGAAGCTTGTTGGGATTAATGGTGCTTGTGGGGCTTGCCATAGTGATTTGTTGGCTTCTTGTTTTCCCCAAAACCCCAATTTTCACTGTGGAAAGTGGCCAAGTTACACCCCACAGCTTGACTGATAGGAAGCTCAATGCCACTGTAGCTTTCACTGTCAAGAGCTTCAACCCCAACAAAAGAGCTTCCATTCATGTTGACCATTTGGTCATGACTATGGACGAGATGGGCCAGAAGTTCCGAACCTCCGTCCCCACCTTCTCCCAAACCCCCGGTAACCAGACCGTCTTCAACCTAACCGCGCTCCTTCAGTTTTCTTACCCGTTCGGCGGCTTGGATGAGAGGGTGAAGTTGGACGGGATCAGTCCCGAGCTTCGCTTTTTCGCCGAAGTCAGTTACATTCTCGAGAGATGGACGTCAAAGCGTCGGACGGTGGAGATCTATTGCAACCACCTGAGGCTTAAGATCAATGGTACCACACCGTTGGATAATACCAAATGCAAAGTGGATCTTTGA

Protein sequence

MRSTTTTTTTTKVPDGGASSSSSASKQTTTANSHGPKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESGQVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSVPTFSQTPGNQTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRTVEIYCNHLRLKINGTTPLDNTKCKVDL

Homology

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BLAST of Sed0021966 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.7 bits (670), Expect = 2.8e-66
Identity = 131/207 (63.29%), Postives = 166/207 (80.19%), Query Frame = 0


Query: 16  GGASSSSS----ASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPK 75
           G ASSS++    A K ++  + HG  KRT+LMRIIGRSLL +M LVGLAIVICWL+VFPK
Sbjct: 7   GEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPK 66

Query: 76  TPIFTVESGQVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSV 135
           TP   +E+G VTPHSLTDRKLNA+++FT+KS+NPNKRASIH+D + MT+D+MGQ F T++
Sbjct: 67  TPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTTTI 126

Query: 136 PTFSQTPGNQTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRT 195
           PTF+Q PGNQT  N T  + F YPFG + + +  DG++PEL F A VSYI+E+W SKRR+
Sbjct: 127 PTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRS 186

Query: 196 VEIYCNHLRLKINGTTPLDNTKCKVDL 218
           +EIYC+ +RLKING+TP DNTKCKVDL
Sbjct: 187 LEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Sed0021966 vs. NCBI nr
Match: XP_022970341.1 (uncharacterized protein At1g08160-like [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 4.1e-65
Identity = 131/207 (63.29%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 16  GGASSSSS----ASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPK 75
           G ASSSS+    A K +  A  HG  KRT+LMRIIGRSLL +M LVGLAIVICWL+VFPK
Sbjct: 7   GEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPK 66

Query: 76  TPIFTVESGQVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSV 135
           TP   +E+G VTPHSLTDRKLNA+++FT+KS+NPNKRASIH+D + MT+D+MGQ F T++
Sbjct: 67  TPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTI 126

Query: 136 PTFSQTPGNQTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRT 195
           PTF+Q PGNQT    T  + F YPFG + + +  +G++PEL F A VSYI+E+W SKRR+
Sbjct: 127 PTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKRRS 186

Query: 196 VEIYCNHLRLKINGTTPLDNTKCKVDL 218
           +EIYC+ +RLKING+TP DNTKCKVDL
Sbjct: 187 LEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Sed0021966 vs. NCBI nr
Match: XP_022964992.1 (uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019294.1 NDR1/HIN1-like protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-64
Identity = 128/211 (60.66%), Postives = 163/211 (77.25%), Query Frame = 0


Query: 8   TTTTKVPDGGASSSSSASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLL 67
           + T +      +S   A K ++    HG  KRT+LMRIIGRSLL +M LVGLAIVICWL+
Sbjct: 3   SNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLV 62

Query: 68  VFPKTPIFTVESGQVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKF 127
           VFPKTP   +E+G VTPHSLTDRKLNA+++FT+KS+NPNKRASIH+D + MT+D+MGQ F
Sbjct: 63  VFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTF 122

Query: 128 RTSVPTFSQTPGNQTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTS 187
            T++PTF+Q PGNQT  N T  + F YPFG + + +  DG++PEL F A VSYI+E+W S
Sbjct: 123 ITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWAS 182

Query: 188 KRRTVEIYCNHLRLKINGTTPLDNTKCKVDL 218
           KRR++EIYC+ +RLKING+TP DNTKCKVDL
Sbjct: 183 KRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Sed0021966 vs. NCBI nr
Match: XP_038895440.1 (uncharacterized protein LOC120083674 [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 6.5e-63
Identity = 123/198 (62.12%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 21  SSSASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESG 80
           +SS+SK+++    HG  KRT+L+RI GRSLLG+M+LVG+ I+ICWL+VFPKTP  TVESG
Sbjct: 10  ASSSSKESSYVQEHGTAKRTKLLRITGRSLLGIMILVGIGIIICWLIVFPKTPNLTVESG 69

Query: 81  QVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSVPTFSQTPGN 140
           QV PH LTDRKL AT+AFTVKS+NPNKRA+IH+D ++M + +MGQ F + +P F+Q PGN
Sbjct: 70  QVIPHRLTDRKLQATIAFTVKSYNPNKRATIHMDSMMMIVTDMGQTFASVIPNFTQPPGN 129

Query: 141 QTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRTVEIYCNHLR 200
           QTV+       F YPFG + E VK +GISP+LRF A+VSYI++RWTSK R +EIYC  LR
Sbjct: 130 QTVWTSAIQGNFIYPFGHMKEFVKAEGISPDLRFSAKVSYIMKRWTSKARILEIYCGGLR 189

Query: 201 LKINGTTPLDNTKCKVDL 218
           LK N +TP DN KC VDL
Sbjct: 190 LKFNDSTPFDNKKCTVDL 207

[Close]

BLAST of Sed0021966 vs. NCBI nr
Match: XP_023537505.1 (uncharacterized protein LOC111798522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 9.7e-59
Identity = 123/214 (57.48%), Postives = 158/214 (73.83%), Query Frame = 0


Query: 8   TTTTKVPDGGASSSSSASKQTTTANSHG----PKRTRLMRIIGRSLLGLMVLVGLAIVIC 67
           ++TT  PD  +SSSS+  +     +S+G      RTRL+RIIGRS+LGLMVLVGLA+V C
Sbjct: 2   SSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVTC 61

Query: 68  WLLVFPKTPIFTVESGQVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMG 127
           WL+V PK P+F++E G VT HSLTDRKLNA+V+F ++SFNPNK+A+IH+D++ MT++EMG
Sbjct: 62  WLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEMG 121

Query: 128 QKFRTSVPTFSQTPGNQTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILER 187
           + F   V  FSQ PGN TV + T  + F YP   L E+VK DGISPEL+  A + YI+  
Sbjct: 122 RMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIING 181

Query: 188 WTSKRRTVEIYCNHLRLKINGTTPLDNTKCKVDL 218
           W SKRR++EIYCN   LKING+TPLDN KC VDL
Sbjct: 182 WISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215

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BLAST of Sed0021966 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.3e-09
Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 44  IIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESGQVTPHSL--TDRKLNATVAFTVKS 103
           I+   LLGL  LVGLAI+I +L + PK  I+TVE+  V   ++   D  +NA  ++ +KS
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 104 FNPNKRASIHVDHLVMTMDEMGQKF-RTSVPTFSQTPGNQTVFNLTALLQFSY---PFGG 163
           +NP K  S+    + ++     Q     ++  F Q P N+T    T L+  +     F  
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIE-TQLVSHNVALSKFNA 160

Query: 164 LDERVKLD--GISPELRFFAEVSYILERWTSKRRTVEIYCNHLRLKINGTT 207
            D R +     I  E+   A VSY    + S+RRT++  C  + + +  ++
Sbjct: 161 RDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208

[Close]

BLAST of Sed0021966 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.2e-08
Identity = 54/190 (28.42%), Postives = 88/190 (46.32%), Query Frame = 0


Query: 41  LMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESGQVT--PHSLTDRKLNATVAFT 100
           L+ +  + ++ L+V++G+A +I WL+V P+   F V    +T   H+  D  L   +A T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 101 VKSFNPNKRASIHVDHLVMTMDEMGQKFRT-SVPTFSQTPGNQTVFNLTALLQFSYPFGG 160
           V   NPNKR  ++ D +       G++F T ++  F Q   N TV   T   Q    F  
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 161 LDERV----KLDGI-SPELRFFAEVSYILERWTSKRRTVEIYCNHLRLKI---NGTTPLD 217
              R     ++ G+ + E++F   V + L     +R   ++ C+ LRL +   NGTT   
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

[Close]

BLAST of Sed0021966 vs. ExPASy TrEMBL
Match: A0A6J1I0B9 (uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC111469334 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.0e-65
Identity = 131/207 (63.29%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 16  GGASSSSS----ASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPK 75
           G ASSSS+    A K +  A  HG  KRT+LMRIIGRSLL +M LVGLAIVICWL+VFPK
Sbjct: 7   GEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPK 66

Query: 76  TPIFTVESGQVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSV 135
           TP   +E+G VTPHSLTDRKLNA+++FT+KS+NPNKRASIH+D + MT+D+MGQ F T++
Sbjct: 67  TPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTI 126

Query: 136 PTFSQTPGNQTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRT 195
           PTF+Q PGNQT    T  + F YPFG + + +  +G++PEL F A VSYI+E+W SKRR+
Sbjct: 127 PTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKRRS 186

Query: 196 VEIYCNHLRLKINGTTPLDNTKCKVDL 218
           +EIYC+ +RLKING+TP DNTKCKVDL
Sbjct: 187 LEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Sed0021966 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 5.7e-65
Identity = 128/211 (60.66%), Postives = 163/211 (77.25%), Query Frame = 0


Query: 8   TTTTKVPDGGASSSSSASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLL 67
           + T +      +S   A K ++    HG  KRT+LMRIIGRSLL +M LVGLAIVICWL+
Sbjct: 3   SNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLV 62

Query: 68  VFPKTPIFTVESGQVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKF 127
           VFPKTP   +E+G VTPHSLTDRKLNA+++FT+KS+NPNKRASIH+D + MT+D+MGQ F
Sbjct: 63  VFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTF 122

Query: 128 RTSVPTFSQTPGNQTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTS 187
            T++PTF+Q PGNQT  N T  + F YPFG + + +  DG++PEL F A VSYI+E+W S
Sbjct: 123 ITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWAS 182

Query: 188 KRRTVEIYCNHLRLKINGTTPLDNTKCKVDL 218
           KRR++EIYC+ +RLKING+TP DNTKCKVDL
Sbjct: 183 KRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Sed0021966 vs. ExPASy TrEMBL
Match: A0A0A0LSV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 6.1e-59
Identity = 118/198 (59.60%), Postives = 152/198 (76.77%), Query Frame = 0


Query: 21  SSSASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESG 80
           SSS+SK+ +    HG  KRTR++RI GR+LLGLM+LV +A++ICWL+VFP+ P   VE+G
Sbjct: 15  SSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETG 74

Query: 81  QVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSVPTFSQTPGN 140
           QV PHSLTDRKLNAT+AFTV S+NPNK+ASI +D + M + +MG  F + +P+F+Q P N
Sbjct: 75  QVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKN 134

Query: 141 QTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRTVEIYCNHLR 200
           +TV   T    F YPFG + E +KL+GISPELRF A+VSYI+ERWTS+ R VE+YC+ LR
Sbjct: 135 KTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLR 194

Query: 201 LKINGTTPLDNTKCKVDL 218
           LK N +T  DN KCKVDL
Sbjct: 195 LKFNDSTVFDNKKCKVDL 212

[Close]

BLAST of Sed0021966 vs. ExPASy TrEMBL
Match: A0A5D3CC54 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00190 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.0e-58
Identity = 116/198 (58.59%), Postives = 153/198 (77.27%), Query Frame = 0


Query: 21  SSSASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESG 80
           SSS++K+ +    HG  KRTR++RI GR+LLGLM+LV +A++ICWL+VFP+ P   VE+G
Sbjct: 11  SSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETG 70

Query: 81  QVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSVPTFSQTPGN 140
           +V PHSLTDRKLNAT+AFTV S+NPNK+ASI +D + M + +MG  F + +P+F+Q P N
Sbjct: 71  KVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKN 130

Query: 141 QTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRTVEIYCNHLR 200
           +TV N T    F YPFG + E VKL+GISP+LRF A+VSYI+ERWTS+ R +E+YC+ LR
Sbjct: 131 KTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLR 190

Query: 201 LKINGTTPLDNTKCKVDL 218
           LK N +T  DN KCKVDL
Sbjct: 191 LKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of Sed0021966 vs. ExPASy TrEMBL
Match: A0A1S3CGQ5 (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.0e-58
Identity = 116/198 (58.59%), Postives = 153/198 (77.27%), Query Frame = 0


Query: 21  SSSASKQTTTANSHG-PKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESG 80
           SSS++K+ +    HG  KRTR++RI GR+LLGLM+LV +A++ICWL+VFP+ P   VE+G
Sbjct: 11  SSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETG 70

Query: 81  QVTPHSLTDRKLNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSVPTFSQTPGN 140
           +V PHSLTDRKLNAT+AFTV S+NPNK+ASI +D + M + +MG  F + +P+F+Q P N
Sbjct: 71  KVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKN 130

Query: 141 QTVFNLTALLQFSYPFGGLDERVKLDGISPELRFFAEVSYILERWTSKRRTVEIYCNHLR 200
           +TV N T    F YPFG + E VKL+GISP+LRF A+VSYI+ERWTS+ R +E+YC+ LR
Sbjct: 131 KTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLR 190

Query: 201 LKINGTTPLDNTKCKVDL 218
           LK N +T  DN KCKVDL
Sbjct: 191 LKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of Sed0021966 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-10
Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 44  IIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESGQVTPHSL--TDRKLNATVAFTVKS 103
           I+   LLGL  LVGLAI+I +L + PK  I+TVE+  V   ++   D  +NA  ++ +KS
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 104 FNPNKRASIHVDHLVMTMDEMGQKF-RTSVPTFSQTPGNQTVFNLTALLQFSY---PFGG 163
           +NP K  S+    + ++     Q     ++  F Q P N+T    T L+  +     F  
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIE-TQLVSHNVALSKFNA 160

Query: 164 LDERVKLD--GISPELRFFAEVSYILERWTSKRRTVEIYCNHLRLKINGTT 207
            D R +     I  E+   A VSY    + S+RRT++  C  + + +  ++
Sbjct: 161 RDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208

[Close]

BLAST of Sed0021966 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 52/192 (27.08%), Postives = 87/192 (45.31%), Query Frame = 0


Query: 37  KRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESGQVTPHSLT-DRKLNATV 96
           +R  L+  I   +L L+ +  +  +I WL   PK   +TVE+  V   +LT D  ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 97  AFTVKSFNPNKRASIHVDHLVMTMDEMGQKFRTSVPTFSQT-PGNQTVFNLTAL------ 156
            FT++S NPN R S++   +     E+  KF+     F    P +Q   N+  +      
Sbjct: 81  QFTIQSHNPNHRISVYYSSV-----EIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIA 140

Query: 157 --LQFSYPFG-GLDERVKLDGISPELRFFAEVSYILERWTSKRRTVEIYCNHLRLKINGT 216
             +  S   G  L  +  L  I  E+   A V + +  W S  RT +I C+H+ + ++  
Sbjct: 141 ENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQP 200

Query: 217 TPLDNTKCKVDL 218
               N+ C  D+
Sbjct: 201 NKSQNSSCDADI 207

[Close]

BLAST of Sed0021966 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-09
Identity = 54/190 (28.42%), Postives = 88/190 (46.32%), Query Frame = 0


Query: 41  LMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESGQVT--PHSLTDRKLNATVAFT 100
           L+ +  + ++ L+V++G+A +I WL+V P+   F V    +T   H+  D  L   +A T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 101 VKSFNPNKRASIHVDHLVMTMDEMGQKFRT-SVPTFSQTPGNQTVFNLTALLQFSYPFGG 160
           V   NPNKR  ++ D +       G++F T ++  F Q   N TV   T   Q    F  
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 161 LDERV----KLDGI-SPELRFFAEVSYILERWTSKRRTVEIYCNHLRLKI---NGTTPLD 217
              R     ++ G+ + E++F   V + L     +R   ++ C+ LRL +   NGTT   
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

[Close]

BLAST of Sed0021966 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 42.0 bits (97), Expect = 7.3e-04
Identity = 28/104 (26.92%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 33  SHGPKRTRLMRIIGRSLLGLMVLVGLAIVICWLLVFPKTPIFTVESGQVTPHSLTDRK-- 92
           +HG  R +L+R I  S++ ++ ++ L I++ W ++ P  P F ++   V   +++     
Sbjct: 6   NHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPN 65

Query: 93  -LNATVAFTVKSFNPNKRASIHVDHLVMTMDEMGQK--FRTSVP 132
            L +    T+ S NPN +  I+ D L +      Q+  F TS+P
Sbjct: 66  LLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIP 109

The following BLAST results are available for this feature:

BLAST of Sed0021966 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520091.1	2.8e-66	63.29	uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970341.1	4.1e-65	63.29	uncharacterized protein At1g08160-like [Cucurbita maxima]	[more]
XP_022964992.1	1.2e-64	60.66	uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/H...	[more]
XP_038895440.1	6.5e-63	62.12	uncharacterized protein LOC120083674 [Benincasa hispida]	[more]
XP_023537505.1	9.7e-59	57.48	uncharacterized protein LOC111798522 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0021966 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	7.3e-09	29.82	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9SJ52	6.2e-08	28.42	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of Sed0021966 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0B9	2.0e-65	63.29	uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC1114693...	[more]
A0A6J1HJ52	5.7e-65	60.66	uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A0A0LSV0	6.1e-59	59.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1	[more]
A0A5D3CC54	1.0e-58	58.59	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00...	[more]
A0A1S3CGQ5	1.0e-58	58.59	uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=...	[more]

BLAST of Sed0021966 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08160.1	5.2e-10	29.82	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22870.1	2.0e-09	27.08	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	4.4e-09	28.42	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	7.3e-04	26.92	NDR1/HIN1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 27..216
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 27..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021966.1	Sed0021966.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane