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Sed0021925 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATCCCTATATTCCCCTTCTTCAACTTCATTCCTAAACTCAAATTACAGTTCTTCTTCTTCGTCTTCAATTCCACGATCTCCAGGTCTGTGTTCTTTTTTTTTTTTTTTTTTTTCTGTTTTATTTATTTATTTCTTGCCATTTCTCCAGATTCAGTTCCTTGGTTTGATTTTCAATTTCGGTGGCTTGTTCTCGGAGGATTCAGATCTGTGTTCAATCCTTCATTACTTCTCTCCAATACCGATTTCACTCTGTTCTTGATGTTTATCTGAATGTTCAAACATTTTACAGGTTGAAAAAATGGCGGGAAAAGGTGGGAAAGGGCTTTTGGCTGCAAAAACCCCAGCCAATGCTAACAAGGATAAGGATAAGAACAAGAAGAAGGCCATCTCTCGATCCTCCCGTGCTGGCATACAGGTGCTCTTGTTCAATTCCAGGAACTAATTCATGACTTCGCTTAAGAATGTTTGATTTCTCTCGTCTGTTCAAGATCTCGGACTAGGAGTTTTCAATGATTTTGATTATTTACTCGTTTAGGCAAATTTCAATTCTAATTTCAAGAATGAGAAATTGTTCATCGATACTTCTTTTTCATTAATTGTGATTCAAAAGGGCAGAGGTCTTTATATAATGACCTTTTGGAATACCAGAACATATATAAGTGCCGTACACCCAATTAACCGATGGTAAAAGTAAGTAAAATACATCAGTAACAGGCATTTATAACAACTGAGATCATGTTGGGAGAATTTTGTTTTTATCTGTGATGTTTTTTTTTTGTTAGCAGCTTGAATTTTAACATGGGGCTTTGAAAGTGAAACCTTTTTTTCAATAATTTGTTTGGGGGAAGTGTAAGCAAGTTTTTTTTTTTTTTTTTTTTTTTTGGTGAGTTGGGCTAAATATTTGCGATTCTAATGGCCATGCCATAAAGCTATATATAGTTGATATTTGTACAATTATGTTGGTGTTCTGCGTATTGTGATACGCGTTCTTTCAATTTTGGCTGTAGTACCATATTTTAATGACAGCTCTGAATTTTAACATGGATTCTGAAATTTCTCCTAATTTTTTTTGTTTTTCGTGGGTTGGACTTAAAATTCTCCATTCAAATACCCATATACACTTTAAGCTCAATGTGGTTAAGATTATGTTGTTCCTGTACTTATTTCAATTCTATTGATGGCTTTGAATTTTAACATGGGACTTAGAAATGTAATTTTATTTAAAGCAGCCAATTGTTTTTTGTGGGTTAGGTTGGGTTGAAGACTTTTCAGTTCAAATGTCCATGTAATTTAATTTCTATGCTACAATTTGATTGAGTTCAAATGATTTCACATAAATTGGGCCTTGTCTGCATCACTGTTGGGTCACTTTAACTTATGTAATCTCTGGATTGTGGGGTTTTAGTTCCCTGTGGGAAGAATTCACAGGCATCTTAAAACAAGAATATCTGCAAATGGGCGAGTTGGTGCAACTGCTGCAGTGTACCTAGCATCAATTCTGGAGTATCTCACTGCGGAAGTGCTCGAGTTGGCCGGAAATGCGAGCAAGGATCTGAAAGTGAAGAGAATCACTCCAAGACACCTTCAGCTGGCCATTAGAGGAGATGAAGAGCTTGATACCCTGATCAAAGGAACCATTGCTGGAGGTGGTGTGATTCCTCATATTCACAAGTCCCTCATTAACAAAGCCAACAAGGAATGAGATATTCACCTTTATGATTCTATCTGTGAGTAGTTGAGCTTAATGTAGTGACTTCTTAGACTGTAGAAGCAGACATTTACTGGTATCTTAGGATTAGCTTCCCTGCTTGCTTTTGTGAATCTTTGTTGCTTTTTTTTTTTCTAGTCTATTTGGACAAGTATATTTGATCAAGGTAAGATTGTTATCTTGTTGGATGGTTTTTAACTTTCTACAAGTTTGTTGGATGGTTCATTCTTCATCTAATTAGTGTCTTTCCACTTTTGAGAAACTTCTGGTTATAGCCTTAGTTCAATTATGCTATGAAGCACGGACTCTCCAAAATAGAGAAAGTATCGGTATCGGACACATGTTAGATATACATTTTTTTGGAC TAATCCCTATATTCCCCTTCTTCAACTTCATTCCTAAACTCAAATTACAGTTCTTCTTCTTCGTCTTCAATTCCACGATCTCCAGGTTGAAAAAATGGCGGGAAAAGGTGGGAAAGGGCTTTTGGCTGCAAAAACCCCAGCCAATGCTAACAAGGATAAGGATAAGAACAAGAAGAAGGCCATCTCTCGATCCTCCCGTGCTGGCATACAGTTCCCTGTGGGAAGAATTCACAGGCATCTTAAAACAAGAATATCTGCAAATGGGCGAGTTGGTGCAACTGCTGCAGTGTACCTAGCATCAATTCTGGAGTATCTCACTGCGGAAGTGCTCGAGTTGGCCGGAAATGCGAGCAAGGATCTGAAAGTGAAGAGAATCACTCCAAGACACCTTCAGCTGGCCATTAGAGGAGATGAAGAGCTTGATACCCTGATCAAAGGAACCATTGCTGGAGGTGGTGTGATTCCTCATATTCACAAGTCCCTCATTAACAAAGCCAACAAGGAATGAGATATTCACCTTTATGATTCTATCTGTGAGTAGTTGAGCTTAATGTAGTGACTTCTTAGACTGTAGAAGCAGACATTTACTGGTATCTTAGGATTAGCTTCCCTGCTTGCTTTTGTGAATCTTTGTTGCTTTTTTTTTTTCTAGTCTATTTGGACAAGTATATTTGATCAAGGTAAGATTGTTATCTTGTTGGATGGTTTTTAACTTTCTACAAGTTTGTTGGATGGTTCATTCTTCATCTAATTAGTGTCTTTCCACTTTTGAGAAACTTCTGGTTATAGCCTTAGTTCAATTATGCTATGAAGCACGGACTCTCCAAAATAGAGAAAGTATCGGTATCGGACACATGTTAGATATACATTTTTTTGGAC ATGGCGGGAAAAGGTGGGAAAGGGCTTTTGGCTGCAAAAACCCCAGCCAATGCTAACAAGGATAAGGATAAGAACAAGAAGAAGGCCATCTCTCGATCCTCCCGTGCTGGCATACAGTTCCCTGTGGGAAGAATTCACAGGCATCTTAAAACAAGAATATCTGCAAATGGGCGAGTTGGTGCAACTGCTGCAGTGTACCTAGCATCAATTCTGGAGTATCTCACTGCGGAAGTGCTCGAGTTGGCCGGAAATGCGAGCAAGGATCTGAAAGTGAAGAGAATCACTCCAAGACACCTTCAGCTGGCCATTAGAGGAGATGAAGAGCTTGATACCCTGATCAAAGGAACCATTGCTGGAGGTGGTGTGATTCCTCATATTCACAAGTCCCTCATTAACAAAGCCAACAAGGAATGA MAGKGGKGLLAAKTPANANKDKDKNKKKAISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKANKE Homology
BLAST of Sed0021925 vs. NCBI nr
Match: XP_004145372.1 (histone H2A variant 1 [Cucumis sativus] >XP_004145373.1 histone H2A variant 1 [Cucumis sativus] >XP_008449356.1 PREDICTED: histone H2A variant 1 [Cucumis melo] >XP_008449358.1 PREDICTED: histone H2A variant 1 [Cucumis melo] >XP_022930908.1 histone H2A variant 1 [Cucurbita moschata] >XP_022967517.1 histone H2A variant 1 [Cucurbita maxima] >XP_022996250.1 histone H2A variant 1 [Cucurbita maxima] >XP_023532530.1 histone H2A variant 1 [Cucurbita pepo subsp. pepo] >XP_031737443.1 histone H2A variant 1 [Cucumis sativus] >XP_038887488.1 histone H2A variant 1 [Benincasa hispida] >XP_038887489.1 histone H2A variant 1 [Benincasa hispida] >KGN61697.1 hypothetical protein Csa_006318 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 2.7e-62 Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. NCBI nr
Match: XP_022145883.1 (histone H2A variant 1 [Momordica charantia] >XP_022145884.1 histone H2A variant 1 [Momordica charantia]) HSP 1 Score: 247.7 bits (631), Expect = 5.9e-62 Identity = 131/137 (95.62%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. NCBI nr
Match: XP_022963902.1 (histone H2A variant 1-like [Cucurbita moschata] >KAG6571446.1 Histone H2A variant 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011211.1 Histone H2A variant 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 247.7 bits (631), Expect = 5.9e-62 Identity = 131/137 (95.62%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. NCBI nr
Match: XP_023511677.1 (histone H2A variant 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.5 bits (628), Expect = 1.3e-61 Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Sed0021925 vs. NCBI nr
Match: KAF8006426.1 (hypothetical protein BT93_K0658 [Corymbia citriodora subsp. variegata] >KAF8006427.1 hypothetical protein BT93_K0658 [Corymbia citriodora subsp. variegata] >KCW49846.1 hypothetical protein EUGRSUZ_K03318 [Eucalyptus grandis]) HSP 1 Score: 245.4 bits (625), Expect = 2.9e-61 Identity = 128/137 (93.43%), Postives = 132/137 (96.35%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy Swiss-Prot
Match: O23628 (Histone H2A variant 1 OS=Arabidopsis thaliana OX=3702 GN=H2AV PE=1 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 5.2e-61 Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy Swiss-Prot
Match: Q8H7Y8 (Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0162200 PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58 Identity = 121/138 (87.68%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy Swiss-Prot
Match: Q84MP7 (Probable histone H2A variant 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0743400 PE=2 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.2e-58 Identity = 118/137 (86.13%), Postives = 125/137 (91.24%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy Swiss-Prot
Match: Q8S857 (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.1e-58 Identity = 123/139 (88.49%), Postives = 128/139 (92.09%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy Swiss-Prot
Match: Q9SII0 (Probable histone H2A variant 2 OS=Arabidopsis thaliana OX=3702 GN=At2g38810 PE=2 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-57 Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy TrEMBL
Match: A0A6J1K687 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111491533 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62 Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy TrEMBL
Match: A0A1S3BLU8 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103491260 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62 Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy TrEMBL
Match: A0A0A0LLQ9 (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_2G225360 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62 Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy TrEMBL
Match: A0A6J1EWU9 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111437256 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62 Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. ExPASy TrEMBL
Match: A0A6J1CX53 (Histone H2A OS=Momordica charantia OX=3673 GN=LOC111015234 PE=3 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.9e-62 Identity = 131/137 (95.62%), Postives = 135/137 (98.54%), Query Frame = 0
BLAST of Sed0021925 vs. TAIR 10
Match: AT3G54560.1 (histone H2A 11 ) HSP 1 Score: 235.0 bits (598), Expect = 3.7e-62 Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of Sed0021925 vs. TAIR 10
Match: AT2G38810.1 (histone H2A 8 ) HSP 1 Score: 223.8 bits (569), Expect = 8.5e-59 Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of Sed0021925 vs. TAIR 10
Match: AT2G38810.3 (histone H2A 8 ) HSP 1 Score: 223.8 bits (569), Expect = 8.5e-59 Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of Sed0021925 vs. TAIR 10
Match: AT2G38810.2 (histone H2A 8 ) HSP 1 Score: 223.8 bits (569), Expect = 8.5e-59 Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of Sed0021925 vs. TAIR 10
Match: AT1G52740.1 (histone H2A protein 9 ) HSP 1 Score: 211.1 bits (536), Expect = 5.7e-55 Identity = 111/137 (81.02%), Postives = 123/137 (89.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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