Sed0021721 (gene) Chayote v1

Overview


Name	Sed0021721
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Poly(A)-specific ribonuclease
Location	LG11: 27369655 .. 27370504 (+)
RNA-Seq Expression	Sed0021721
Synteny	Sed0021721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACCCTTTGAGACATGTCTTTGTCTAACATTGCTCTCAATGCCAATTCCATTCACATCCGTGAGGTGTGGAGCGCCAACTTGGAAGATGAGTTTGAGCTTATCCGTCAAATACCTGATGATTTTAATTACATATCCATGGTTACCAAACACCCCGGCGTGGTGCTCCGACCGCAGGGCCGTGACCGCGACACCAACAACACCACTGATTACCACTACCAGACTCTCAGGAGCAACGTCGACTCCTCGAACTTGATCCAGTTGGGCCTTACCTTCTCCGACAAGAACGGAGCACTCCCAACTTGCGGAACAGACAAGTACTGCATCTGGGAATTCAACTTCCGCCAATTCAACATGGATGATGATACTTTTTCCATTGCGGCATTGCAGCCGAGTGGCATTGATTTCCACAAGAACAACGAAAAGGGTATCGATGAGAGACGATTCGGTGAGCTTCTAACGTCTTCTGGGATTGTGTTGAACGATGGTGTTAGGTGGGTGACGTTTCACGGCGGATATGATTTTGGTTACTTGATCAAGTCGATGACTCTCAAACCATTGCCACAAAACCTGCCTGACTTTTTGGAGTTGATGGATATGTATTTTACTGAGGTTTATGACATCAAGCATTTGATGAAGTTCTGCAATGTCTATGGGGAGCTGAATAAACTTGGGGAGATATTGGATGTGGAGAGGATTGGAGTTGGTAGTCAAGCAGGATCTGATAGTCTGTTTGTTGCATCTAATTTTAGGAAGTTGAGGGATATCTATTTCAATGGATCTGTGCAGAAATACAAATGTGTTTTGTTTGGTCTTGGTGGTTCTAGTATTAATAATTGATGAGTGTGAG

mRNA sequence

CAAACCCTTTGAGACATGTCTTTGTCTAACATTGCTCTCAATGCCAATTCCATTCACATCCGTGAGGTGTGGAGCGCCAACTTGGAAGATGAGTTTGAGCTTATCCGTCAAATACCTGATGATTTTAATTACATATCCATGGTTACCAAACACCCCGGCGTGGTGCTCCGACCGCAGGGCCGTGACCGCGACACCAACAACACCACTGATTACCACTACCAGACTCTCAGGAGCAACGTCGACTCCTCGAACTTGATCCAGTTGGGCCTTACCTTCTCCGACAAGAACGGAGCACTCCCAACTTGCGGAACAGACAAGTACTGCATCTGGGAATTCAACTTCCGCCAATTCAACATGGATGATGATACTTTTTCCATTGCGGCATTGCAGCCGAGTGGCATTGATTTCCACAAGAACAACGAAAAGGGTATCGATGAGAGACGATTCGGTGAGCTTCTAACGTCTTCTGGGATTGTGTTGAACGATGGTGTTAGGTGGGTGACGTTTCACGGCGGATATGATTTTGGTTACTTGATCAAGTCGATGACTCTCAAACCATTGCCACAAAACCTGCCTGACTTTTTGGAGTTGATGGATATGTATTTTACTGAGGTTTATGACATCAAGCATTTGATGAAGTTCTGCAATGTCTATGGGGAGCTGAATAAACTTGGGGAGATATTGGATGTGGAGAGGATTGGAGTTGGTAGTCAAGCAGGATCTGATAGTCTGTTTGTTGCATCTAATTTTAGGAAGTTGAGGGATATCTATTTCAATGGATCTGTGCAGAAATACAAATGTGTTTTGTTTGGTCTTGGTGGTTCTAGTATTAATAATTGATGAGTGTGAG

Coding sequence (CDS)

ATGTCTTTGTCTAACATTGCTCTCAATGCCAATTCCATTCACATCCGTGAGGTGTGGAGCGCCAACTTGGAAGATGAGTTTGAGCTTATCCGTCAAATACCTGATGATTTTAATTACATATCCATGGTTACCAAACACCCCGGCGTGGTGCTCCGACCGCAGGGCCGTGACCGCGACACCAACAACACCACTGATTACCACTACCAGACTCTCAGGAGCAACGTCGACTCCTCGAACTTGATCCAGTTGGGCCTTACCTTCTCCGACAAGAACGGAGCACTCCCAACTTGCGGAACAGACAAGTACTGCATCTGGGAATTCAACTTCCGCCAATTCAACATGGATGATGATACTTTTTCCATTGCGGCATTGCAGCCGAGTGGCATTGATTTCCACAAGAACAACGAAAAGGGTATCGATGAGAGACGATTCGGTGAGCTTCTAACGTCTTCTGGGATTGTGTTGAACGATGGTGTTAGGTGGGTGACGTTTCACGGCGGATATGATTTTGGTTACTTGATCAAGTCGATGACTCTCAAACCATTGCCACAAAACCTGCCTGACTTTTTGGAGTTGATGGATATGTATTTTACTGAGGTTTATGACATCAAGCATTTGATGAAGTTCTGCAATGTCTATGGGGAGCTGAATAAACTTGGGGAGATATTGGATGTGGAGAGGATTGGAGTTGGTAGTCAAGCAGGATCTGATAGTCTGTTTGTTGCATCTAATTTTAGGAAGTTGAGGGATATCTATTTCAATGGATCTGTGCAGAAATACAAATGTGTTTTGTTTGGTCTTGGTGGTTCTAGTATTAATAATTGA

Protein sequence

MSLSNIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTTDYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTFSIAALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKPLPQNLPDFLELMDMYFTEVYDIKHLMKFCNVYGELNKLGEILDVERIGVGSQAGSDSLFVASNFRKLRDIYFNGSVQKYKCVLFGLGGSSINN

Homology

[Close]

BLAST of Sed0021721 vs. NCBI nr
Match: KAF4353493.1 (hypothetical protein F8388_013785 [Cannabis sativa] >KAF4390350.1 hypothetical protein G4B88_024356 [Cannabis sativa])

HSP 1 Score: 352.8 bits (904), Expect = 2.6e-93
Identity = 175/276 (63.41%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SIHIREVW+ NL++EF LIR I D FNYI+M T+ PGVVLRP G  ++ N   
Sbjct: 2   SILSKGDSIHIREVWNDNLDEEFALIRDIVDRFNYIAMDTEFPGVVLRPVGNFKNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD++G LPTCGTDK+CIW+FNFR+FN+ +D F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNISEDVFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+  GIDF KNNEKGID  RFGELL SSGIVLNDGV WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVNWVTFHSGYDFGYLLKLLTCRS 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP +  DF +L+++YF  VYDIKHLMKFCN ++G LNKL E+LDVER+GV  QAGSDSL 
Sbjct: 182 LPDSQADFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG---GSSIN 274
            A  FRKLR+ +F+GS +KY  VL+GLG   G S N
Sbjct: 242 TACTFRKLRETFFSGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Sed0021721 vs. NCBI nr
Match: XP_030951280.1 (probable CCR4-associated factor 1 homolog 7 [Quercus lobata] >XP_030951281.1 probable CCR4-associated factor 1 homolog 7 [Quercus lobata])

HSP 1 Score: 351.7 bits (901), Expect = 5.8e-93
Identity = 174/276 (63.04%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SI IREVW+ NLE+EF LIR++ D++N+I+M T+ PGVVLRP G  ++ N   
Sbjct: 2   SILPKGDSIQIREVWNDNLEEEFSLIREVVDNYNFIAMDTEFPGVVLRPVGTFKNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD+NG LPTCGTDK+CIW+FNFR+FN+ +D F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L   GIDF KNNEKGID  RFGELL SSGIVLNDGV+WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVQWVTFHSGYDFGYLLKLLTCRS 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP     F +L++MYF  VYDIKHLMKFCN ++G LNKL E+LDVER+GV  QAGSDSL 
Sbjct: 182 LPDTQAGFFDLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG---GSSIN 274
            AS FRKLR+ +F+GS +KY  VL+GLG   G S N
Sbjct: 242 TASTFRKLRETFFSGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Sed0021721 vs. NCBI nr
Match: KAB1204686.1 (hypothetical protein CJ030_MR8G012758 [Morella rubra])

HSP 1 Score: 351.7 bits (901), Expect = 5.8e-93
Identity = 174/271 (64.21%), Postives = 209/271 (77.12%), Query Frame = 0


Query: 10  ANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTTDYHYQ 69
           ++SI IREVW+ NLE+EF LIR+I D +NYI+M T+ PGVVLRP G  ++ N   DY+YQ
Sbjct: 7   SDSIQIREVWNDNLEEEFALIREIVDSYNYIAMDTEFPGVVLRPVGTFKNIN---DYNYQ 66

Query: 70  TLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SIAALQP 129
           TL+ NVD   LIQLGLTFSD++G LPTCGTDK+C+W+FNFR+FN+ +D F   SI  L  
Sbjct: 67  TLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDKFCVWQFNFREFNISEDIFASDSIELLHQ 126

Query: 130 SGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKPLPQNL 189
            GIDF KNNEKGID  RFGELL SSGIVLNDGV+WVTFH GYDFGYL+K +T + LP   
Sbjct: 127 CGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVQWVTFHSGYDFGYLLKLLTCRSLPDTQ 186

Query: 190 PDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLFVASNF 249
             F +L++MYF  VYDIKHLMKFCN ++G LNKL E+L+VER+GV  QAGSDSL  AS F
Sbjct: 187 SGFFDLINMYFPLVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTASTF 246

Query: 250 RKLRDIYFNGSVQKYKCVLFGLG---GSSIN 274
           RKLRD +FNGS +KY  VL+GLG   G S N
Sbjct: 247 RKLRDTFFNGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Sed0021721 vs. NCBI nr
Match: KAF3965618.1 (hypothetical protein CMV_010209 [Castanea mollissima])

HSP 1 Score: 351.3 bits (900), Expect = 7.6e-93
Identity = 171/268 (63.81%), Postives = 208/268 (77.61%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SI IREVW+ NLE+EF LIR++ D++N+I+M T+ PGVVLRP G  ++ N   
Sbjct: 2   SILPKGDSIQIREVWNDNLEEEFSLIREVVDNYNFIAMDTEFPGVVLRPVGTFKNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD+NG LPTCGTDK+CIW+FNFR+FN+ +D F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L   GIDF KNNEKGID  RFGELL SSGIVLNDGV+WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVQWVTFHSGYDFGYLLKLLTCRS 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP     F +L++MYF  VYDIKHLMKFCN ++G LNKL E+LDVER+GV  QAGSDSL 
Sbjct: 182 LPDTQAGFFDLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG 269
            AS FRKLR+ +F+GS +KY  VL+GLG
Sbjct: 242 TASTFRKLRETFFSGSTEKYAGVLYGLG 266

[Close]

BLAST of Sed0021721 vs. NCBI nr
Match: XP_022132308.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 350.9 bits (899), Expect = 9.9e-93
Identity = 173/271 (63.84%), Postives = 208/271 (76.75%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SI IREVW+ NLE+EF LIR+I D+FNYI+M T+ PGVVLRP G  ++ N   
Sbjct: 2   SILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD+NG LPTCGTDK+CIW+FNFR+FN+ +D F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+  GIDF KNNE+GID  RFGELL SSG+VLNDGV WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRT 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP     F +L+++YF  VYDIKHLMKFCN ++G LNKL E+L+VERIGV  QAGSDSL 
Sbjct: 182 LPDTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLGGSS 272
            A  FRKLRD +FNGS +KY  VL+GLG  S
Sbjct: 242 TACTFRKLRDTFFNGSTKKYAGVLYGLGVES 269

[Close]

BLAST of Sed0021721 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 320.5 bits (820), Expect = 1.9e-86
Identity = 156/269 (57.99%), Postives = 202/269 (75.09%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           ++ L  +SI IREVW+ NLE E  LIR++ DDF +++M T+ PG+V RP G  +     T
Sbjct: 2   SLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFK---TNT 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTD-KYCIWEFNFRQFNMDDD---TFS 124
           +YHY+TL++NV+   +IQLGLTFSD+ G LPTCGTD KYCIW+FNFR+F+++ D   T S
Sbjct: 62  EYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDS 121

Query: 125 IAALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLK 184
           I  L+ SGIDF KNNE GID +RF ELL SSGIVLN+ V WVTFH GYDFGYL+K +T +
Sbjct: 122 IELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQ 181

Query: 185 PLPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSL 244
            LP+    F E++ +YF  VYDIKHLMKFCN ++G LNKL E+LDVER+G+  QAGSDSL
Sbjct: 182 NLPETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSL 241

Query: 245 FVASNFRKLRDIYFNGSVQKYKCVLFGLG 269
             +  FRKL++ +F GS++KY  VL+GLG
Sbjct: 242 LTSCTFRKLQENFFIGSMEKYSGVLYGLG 267

[Close]

BLAST of Sed0021721 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.2e-86
Identity = 152/268 (56.72%), Postives = 201/268 (75.00%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           ++ L  +SI IREVW+ NL++E +LIR + DDF Y++M T+ PG+V+RP G  +   +  
Sbjct: 2   SLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK---SNA 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DYHY+TL++NV+   +IQLGLTFS++ G LPTCGTDKYCIW+FNFR+F++D D F   SI
Sbjct: 62  DYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+ SGID  KN   GID +RF ELL SSGIVLN+ V WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQN 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP +  DF +L+++YF  VYDIKHLMKFCN ++G LNKL E+L+VER+G+  QAGSDSL 
Sbjct: 182 LPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG 269
            +  FRKL++ +F G + KY  VL+GLG
Sbjct: 242 TSCTFRKLKENFFVGPLHKYSGVLYGLG 266

[Close]

BLAST of Sed0021721 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.2e-86
Identity = 157/265 (59.25%), Postives = 196/265 (73.96%), Query Frame = 0


Query: 8   LNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTTDYH 67
           L  +SI IREVW  NL +EF LIR+I D F+YI+M T+ PGVVL+P    +  N   D +
Sbjct: 5   LKEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNN---DLN 64

Query: 68  YQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SIAAL 127
           Y+TL+ NVD   LIQ+GLTFSD+NG LPTCGTDK+CIW+FNFR+FN+ +D +   SI  L
Sbjct: 65  YRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELL 124

Query: 128 QPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKPLPQ 187
           +  GIDF KN EKGID  RFGEL+ SSGIVLND + WVTFHGGYDFGYL+K +T K LP 
Sbjct: 125 RQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPL 184

Query: 188 NLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLFVAS 247
              DF +L+ +YF  VYDIKHLM FCN ++G LN+L E++ VER+G+  QAGSDSL    
Sbjct: 185 KQADFFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLG 244

Query: 248 NFRKLRDIYFNGSVQKYKCVLFGLG 269
           +FRKL++ YF GS +KY  VL+GLG
Sbjct: 245 SFRKLKERYFPGSTEKYTGVLYGLG 266

[Close]

BLAST of Sed0021721 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.3e-74
Identity = 137/264 (51.89%), Postives = 183/264 (69.32%), Query Frame = 0


Query: 11  NSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT---DYH 70
           ++I IREVW+ NLE E  LI Q  DDF Y++M T+ PG+V +    + + N  +   +Y+
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 71  YQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SIAAL 130
           Y TL++NV+   LIQLGLT SD+ G LPTCGT+K CIW+FNFR+FN+  D F   SI  L
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 131 QPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKPLPQ 190
           + S ID  KNNE G+D +RF ELL  SG+VLND + WVTFH GYDFGYL+K ++ K LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 191 NLPDFLELMDMYFTEVYDIKHLMKFC-NVYGELNKLGEILDVERIGVGSQAGSDSLFVAS 250
            + DF + M+ +F  VYDIK+LM FC N+YG L K+ E+L V+R+G+  QAGSDSL    
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 251 NFRKLRDIYFNGSVQKYKCVLFGL 268
            F K+++ +F GS+ KY   LFGL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of Sed0021721 vs. ExPASy Swiss-Prot
Match: Q08BM8 (CCR4-NOT transcription complex subunit 7 OS=Danio rerio OX=7955 GN=cnot7 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.4e-59
Identity = 126/267 (47.19%), Postives = 171/267 (64.04%), Query Frame = 0


Query: 11  NSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTTDYHYQT 70
           +S  I EVW+ NLE+E + IRQ+   FNYI+M T+ PGVV RP G  R   +  DY YQ 
Sbjct: 8   HSQRICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFR---SNADYQYQL 67

Query: 71  LRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SIAALQPS 130
           LR NVD   +IQLGLTF ++ G  P  GT     W+FNF+ FN+ +D +   SI  L  S
Sbjct: 68  LRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTSS 127

Query: 131 GIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKPLPQNLP 190
           GI F K+ E+GI+   F ELL +SG+VL +GV+W++FH GYDFGYLIK ++   LP    
Sbjct: 128 GIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEV 187

Query: 191 DFLELMDMYFTEVYDIKHLMKFC-NVYGELNKLGEILDVERIGVGSQAGSDSLFVASNFR 250
           DF E++ ++F  +YD+K+LMK C N+ G L ++ E L++ERIG   QAGSDSL     F 
Sbjct: 188 DFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFF 247

Query: 251 KLRDIYFNGSVQ--KYKCVLFGLGGSS 272
           K+R+++F   +   KY   L+GLG  S
Sbjct: 248 KMREMFFEDHIDDAKYCGHLYGLGSGS 266

[Close]

BLAST of Sed0021721 vs. ExPASy TrEMBL
Match: A0A7J6E4Y5 (Poly(A)-specific ribonuclease OS=Cannabis sativa OX=3483 GN=F8388_013785 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93
Identity = 175/276 (63.41%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SIHIREVW+ NL++EF LIR I D FNYI+M T+ PGVVLRP G  ++ N   
Sbjct: 2   SILSKGDSIHIREVWNDNLDEEFALIRDIVDRFNYIAMDTEFPGVVLRPVGNFKNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD++G LPTCGTDK+CIW+FNFR+FN+ +D F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNISEDVFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+  GIDF KNNEKGID  RFGELL SSGIVLNDGV WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVNWVTFHSGYDFGYLLKLLTCRS 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP +  DF +L+++YF  VYDIKHLMKFCN ++G LNKL E+LDVER+GV  QAGSDSL 
Sbjct: 182 LPDSQADFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG---GSSIN 274
            A  FRKLR+ +F+GS +KY  VL+GLG   G S N
Sbjct: 242 TACTFRKLRETFFSGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Sed0021721 vs. ExPASy TrEMBL
Match: A0A6A1UX59 (Poly(A)-specific ribonuclease OS=Morella rubra OX=262757 GN=CJ030_MR8G012758 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.8e-93
Identity = 174/271 (64.21%), Postives = 209/271 (77.12%), Query Frame = 0


Query: 10  ANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTTDYHYQ 69
           ++SI IREVW+ NLE+EF LIR+I D +NYI+M T+ PGVVLRP G  ++ N   DY+YQ
Sbjct: 7   SDSIQIREVWNDNLEEEFALIREIVDSYNYIAMDTEFPGVVLRPVGTFKNIN---DYNYQ 66

Query: 70  TLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SIAALQP 129
           TL+ NVD   LIQLGLTFSD++G LPTCGTDK+C+W+FNFR+FN+ +D F   SI  L  
Sbjct: 67  TLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDKFCVWQFNFREFNISEDIFASDSIELLHQ 126

Query: 130 SGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKPLPQNL 189
            GIDF KNNEKGID  RFGELL SSGIVLNDGV+WVTFH GYDFGYL+K +T + LP   
Sbjct: 127 CGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVQWVTFHSGYDFGYLLKLLTCRSLPDTQ 186

Query: 190 PDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLFVASNF 249
             F +L++MYF  VYDIKHLMKFCN ++G LNKL E+L+VER+GV  QAGSDSL  AS F
Sbjct: 187 SGFFDLINMYFPLVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTASTF 246

Query: 250 RKLRDIYFNGSVQKYKCVLFGLG---GSSIN 274
           RKLRD +FNGS +KY  VL+GLG   G S N
Sbjct: 247 RKLRDTFFNGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Sed0021721 vs. ExPASy TrEMBL
Match: A0A7N2KU65 (Poly(A)-specific ribonuclease OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.8e-93
Identity = 174/276 (63.04%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SI IREVW+ NLE+EF LIR++ D++N+I+M T+ PGVVLRP G  ++ N   
Sbjct: 2   SILPKGDSIQIREVWNDNLEEEFSLIREVVDNYNFIAMDTEFPGVVLRPVGTFKNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD+NG LPTCGTDK+CIW+FNFR+FN+ +D F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L   GIDF KNNEKGID  RFGELL SSGIVLNDGV+WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVQWVTFHSGYDFGYLLKLLTCRS 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP     F +L++MYF  VYDIKHLMKFCN ++G LNKL E+LDVER+GV  QAGSDSL 
Sbjct: 182 LPDTQAGFFDLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG---GSSIN 274
            AS FRKLR+ +F+GS +KY  VL+GLG   G S N
Sbjct: 242 TASTFRKLRETFFSGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Sed0021721 vs. ExPASy TrEMBL
Match: A0A2N9GHJ9 (Poly(A)-specific ribonuclease OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26772 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.7e-93
Identity = 176/276 (63.77%), Postives = 207/276 (75.00%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SI IREVW+ NLE+EF LIR+I D +N+I+M T+ PGVVLRP G  ++ N   
Sbjct: 2   SILPKGDSIQIREVWNDNLEEEFALIREIVDGYNFIAMDTEFPGVVLRPVGTFQNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD NG LPTCGTDK+C+W+FNFR+FN+ DD F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDGNGNLPTCGTDKFCVWQFNFREFNVSDDIFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L   GIDF KNNEKGID  RFGELL SSGIVLNDGV WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRS 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP     F +L++MYF  VYDIKHLMKFCN ++G LNKL E+LDVER+GV  QAGSDSL 
Sbjct: 182 LPDTQAGFFDLINMYFPMVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG---GSSIN 274
            A  FRKLRD +FNGS +KY  VL+GLG   G S N
Sbjct: 242 TACTFRKLRDTFFNGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Sed0021721 vs. ExPASy TrEMBL
Match: B9RNX3 (Poly(A)-specific ribonuclease OS=Ricinus communis OX=3988 GN=RCOM_0921770 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.8e-93
Identity = 170/268 (63.43%), Postives = 206/268 (76.87%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           +I    +SIHIREVW+ NLE+EF LIR+I D FNY++M T+ PGVVLRP G  ++ N   
Sbjct: 2   SIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIN--- 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DY+YQTL+ NVD   LIQLGLTFSD+NG LPTCGTDK+CIW+FNFR+FN+ +D F   SI
Sbjct: 62  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+  GIDF KNNEKGID  RFGEL+ SSGIVLNDGV WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRS 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP     F +L++ YF  VYDIKHLMKFCN ++G LNKL E+L+VER+G+  QAGSDSL 
Sbjct: 182 LPDTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG 269
            +  FRKLRD +FNGS +KY  VL+GLG
Sbjct: 242 TSCTFRKLRDNFFNGSTEKYAGVLYGLG 266

[Close]

BLAST of Sed0021721 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-87
Identity = 156/269 (57.99%), Postives = 202/269 (75.09%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           ++ L  +SI IREVW+ NLE E  LIR++ DDF +++M T+ PG+V RP G  +     T
Sbjct: 2   SLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFK---TNT 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTD-KYCIWEFNFRQFNMDDD---TFS 124
           +YHY+TL++NV+   +IQLGLTFSD+ G LPTCGTD KYCIW+FNFR+F+++ D   T S
Sbjct: 62  EYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDS 121

Query: 125 IAALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLK 184
           I  L+ SGIDF KNNE GID +RF ELL SSGIVLN+ V WVTFH GYDFGYL+K +T +
Sbjct: 122 IELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQ 181

Query: 185 PLPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSL 244
            LP+    F E++ +YF  VYDIKHLMKFCN ++G LNKL E+LDVER+G+  QAGSDSL
Sbjct: 182 NLPETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSL 241

Query: 245 FVASNFRKLRDIYFNGSVQKYKCVLFGLG 269
             +  FRKL++ +F GS++KY  VL+GLG
Sbjct: 242 LTSCTFRKLQENFFIGSMEKYSGVLYGLG 267

[Close]

BLAST of Sed0021721 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 319.3 bits (817), Expect = 3.0e-87
Identity = 152/268 (56.72%), Postives = 201/268 (75.00%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           ++ L  +SI IREVW+ NL++E +LIR + DDF Y++M T+ PG+V+RP G  +   +  
Sbjct: 2   SLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK---SNA 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DYHY+TL++NV+   +IQLGLTFS++ G LPTCGTDKYCIW+FNFR+F++D D F   SI
Sbjct: 62  DYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+ SGID  KN   GID +RF ELL SSGIVLN+ V WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQN 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP +  DF +L+++YF  VYDIKHLMKFCN ++G LNKL E+L+VER+G+  QAGSDSL 
Sbjct: 182 LPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG 269
            +  FRKL++ +F G + KY  VL+GLG
Sbjct: 242 TSCTFRKLKENFFVGPLHKYSGVLYGLG 266

[Close]

BLAST of Sed0021721 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 319.3 bits (817), Expect = 3.0e-87
Identity = 152/268 (56.72%), Postives = 201/268 (75.00%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           ++ L  +SI IREVW+ NL++E +LIR + DDF Y++M T+ PG+V+RP G  +   +  
Sbjct: 2   SLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK---SNA 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DYHY+TL++NV+   +IQLGLTFS++ G LPTCGTDKYCIW+FNFR+F++D D F   SI
Sbjct: 62  DYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+ SGID  KN   GID +RF ELL SSGIVLN+ V WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQN 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP +  DF +L+++YF  VYDIKHLMKFCN ++G LNKL E+L+VER+G+  QAGSDSL 
Sbjct: 182 LPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG 269
            +  FRKL++ +F G + KY  VL+GLG
Sbjct: 242 TSCTFRKLKENFFVGPLHKYSGVLYGLG 266

[Close]

BLAST of Sed0021721 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 319.3 bits (817), Expect = 3.0e-87
Identity = 152/268 (56.72%), Postives = 201/268 (75.00%), Query Frame = 0


Query: 5   NIALNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTT 64
           ++ L  +SI IREVW+ NL++E +LIR + DDF Y++M T+ PG+V+RP G  +   +  
Sbjct: 2   SLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK---SNA 61

Query: 65  DYHYQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SI 124
           DYHY+TL++NV+   +IQLGLTFS++ G LPTCGTDKYCIW+FNFR+F++D D F   SI
Sbjct: 62  DYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSI 121

Query: 125 AALQPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKP 184
             L+ SGID  KN   GID +RF ELL SSGIVLN+ V WVTFH GYDFGYL+K +T + 
Sbjct: 122 ELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQN 181

Query: 185 LPQNLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLF 244
           LP +  DF +L+++YF  VYDIKHLMKFCN ++G LNKL E+L+VER+G+  QAGSDSL 
Sbjct: 182 LPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLL 241

Query: 245 VASNFRKLRDIYFNGSVQKYKCVLFGLG 269
            +  FRKL++ +F G + KY  VL+GLG
Sbjct: 242 TSCTFRKLKENFFVGPLHKYSGVLYGLG 266

[Close]

BLAST of Sed0021721 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 318.5 bits (815), Expect = 5.1e-87
Identity = 157/265 (59.25%), Postives = 196/265 (73.96%), Query Frame = 0


Query: 8   LNANSIHIREVWSANLEDEFELIRQIPDDFNYISMVTKHPGVVLRPQGRDRDTNNTTDYH 67
           L  +SI IREVW  NL +EF LIR+I D F+YI+M T+ PGVVL+P    +  N   D +
Sbjct: 5   LKEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNN---DLN 64

Query: 68  YQTLRSNVDSSNLIQLGLTFSDKNGALPTCGTDKYCIWEFNFRQFNMDDDTF---SIAAL 127
           Y+TL+ NVD   LIQ+GLTFSD+NG LPTCGTDK+CIW+FNFR+FN+ +D +   SI  L
Sbjct: 65  YRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELL 124

Query: 128 QPSGIDFHKNNEKGIDERRFGELLTSSGIVLNDGVRWVTFHGGYDFGYLIKSMTLKPLPQ 187
           +  GIDF KN EKGID  RFGEL+ SSGIVLND + WVTFHGGYDFGYL+K +T K LP 
Sbjct: 125 RQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPL 184

Query: 188 NLPDFLELMDMYFTEVYDIKHLMKFCN-VYGELNKLGEILDVERIGVGSQAGSDSLFVAS 247
              DF +L+ +YF  VYDIKHLM FCN ++G LN+L E++ VER+G+  QAGSDSL    
Sbjct: 185 KQADFFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLG 244

Query: 248 NFRKLRDIYFNGSVQKYKCVLFGLG 269
           +FRKL++ YF GS +KY  VL+GLG
Sbjct: 245 SFRKLKERYFPGSTEKYTGVLYGLG 266

The following BLAST results are available for this feature:

BLAST of Sed0021721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4353493.1	2.6e-93	63.41	hypothetical protein F8388_013785 [Cannabis sativa] >KAF4390350.1 hypothetical p...	[more]
XP_030951280.1	5.8e-93	63.04	probable CCR4-associated factor 1 homolog 7 [Quercus lobata] >XP_030951281.1 pro...	[more]
KAB1204686.1	5.8e-93	64.21	hypothetical protein CJ030_MR8G012758 [Morella rubra]	[more]
KAF3965618.1	7.6e-93	63.81	hypothetical protein CMV_010209 [Castanea mollissima]	[more]
XP_022132308.1	9.9e-93	63.84	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]

BLAST of Sed0021721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	1.9e-86	57.99	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	4.2e-86	56.72	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	7.2e-86	59.25	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9S9P2	1.3e-74	51.89	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q08BM8	3.4e-59	47.19	CCR4-NOT transcription complex subunit 7 OS=Danio rerio OX=7955 GN=cnot7 PE=2 SV...	[more]

BLAST of Sed0021721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6E4Y5	1.3e-93	63.41	Poly(A)-specific ribonuclease OS=Cannabis sativa OX=3483 GN=F8388_013785 PE=3 SV...	[more]
A0A6A1UX59	2.8e-93	64.21	Poly(A)-specific ribonuclease OS=Morella rubra OX=262757 GN=CJ030_MR8G012758 PE=...	[more]
A0A7N2KU65	2.8e-93	63.04	Poly(A)-specific ribonuclease OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A2N9GHJ9	3.7e-93	63.77	Poly(A)-specific ribonuclease OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26772 PE=3...	[more]
B9RNX3	4.8e-93	63.43	Poly(A)-specific ribonuclease OS=Ricinus communis OX=3988 GN=RCOM_0921770 PE=3 S...	[more]

BLAST of Sed0021721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	1.3e-87	57.99	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	3.0e-87	56.72	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	3.0e-87	56.72	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	3.0e-87	56.72	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	5.1e-87	59.25	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 164..224 e-value: 2.1E-6 score: 27.2
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 18..136 e-value: 2.1E-6 score: 27.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 4..270 e-value: 4.0E-78 score: 264.2
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 8..268
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 8..268
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 8..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021721.1	Sed0021721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity