Sed0021422 (gene) Chayote v1

Overview


Name	Sed0021422
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog A4C
Location	LG05: 26384972 .. 26388437 (+)
RNA-Seq Expression	Sed0021422
Synteny	Sed0021422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAACCCTCAATTCAATTTGGTGTTCTTCCCAATCGCATCAAGCGATCGATTGTTCCTCCTCCGGATCGATCGCTTGGTGTCGGATTCGATTAGTATGTCCAATTTCAACCAGAAGATTGATTATGTGTTCAAGGTGGTGTTGATCGGAGACTCCGCGGTGGGGAAATCGCAGCTTCTGTCCCGTTTTGTTCGGAATGAGTTCAGTTTGGATTCCAAGGCCACGCTTGGGGTTGAGTTTCAGACCAAGACGCTTCTTATTGACAACAAGGCTATTAAGGCGCAGATATGGGATACTGCTGGACAGGAAAGGTACAAAAATTGACCATGTTTCTTATGCATTTCCTTGCTTTTTAATATGATTATGAATTATTGTGCCACTTGTTTCCACAATTTCAATGTCTAAGATTCGTAGGAGCCTGGTAGTTGTTTTAGTTACACATCCCTTTTTAGACAGTGTTTGGGACAAAGAGAATGAGAATACAAGAGAGATTTTGAGGAAAAATTATATCTGCGTTTGGAGTTTATCGAATGATTATGAAGAACAAAATAGTGAGTATGGAGAGAATGAAAAGTGGATATGGGAGAATAAAAAGTAGTTATAGGAGAATGAAATTATGAAGAGAATGAATTGAGCACATATGGCTCTTAAGTTTCCAGGTTCTAGACTTACCTCTGACATTAATTTGTAGACCCCTCTCGTGTCTTCATTCCTCCGATATTTCTGGTGCTTGACCTAGAGATGAGTGTGGTTAACCTCATTAAAAAAAAAAAAGAATATTAATGATTATGGGAGATGAATATTAGCGATTACATGGAGAATGATTCTCAGTGGCTCAAATGTGGGCAAAATAATTATTCTCTTTATAATCATTCTCGTTCTCTTTATCCCAAACACTCCCTTAATGCTAAAGAAGATTTACTTCGATGATGTATTAGTAGCTCATTGTAAATCTTGATCCTAATAATGGGTTTAGCGAACTTTTCTTTCAGATGACCACAGTGCACCTAGTTTTAGTTATCTTTTATGCCATCCGAAGGTTTTCATATTCTTGGTGTTCCCATCAACTTGTGAACCAAATTGCATTTCCTTTAAAAAAGAAACTGCAAAGTCCCAAGGATGTGGGCCAAGTTGGCTAAGATATGATATTGTGCACAACTAAAGATGTCCATTTTGAGCCCGTGGGGACCCGGTTCTATAGGCGGTGAATTTTCGAATGGAGAGTGAGTGGGGATGAAAAGTTCTCCACGAGCTAAATGGGGATGGGACAGGAAATGTATTTCCTATCCTCGTTTCCGGTTCCTGTCCGTTCATGTTTTATATATTTTTAAAAATTTTTCTAAATACATTTTAGTATAAATATTTATTTGGATTAATATTTTACTTGCCTAATTAATTATTTAATTAAAAAACAATAAACATTTCTTTTAATATTGAAAAAATTATCTAAGACTTAGTGAATTGAGTTAAAATCGAGAAATTTTATAAAAATATTAAGAATAAAAAATGAAAAGAAAAACAGTTAAATGAGGAATAATTTCGAGTGGAGAACCCAATCCCCACGATTTACTGCGATGAATCTCTGCCCAATTTCGGACAAAATTTTACGATGAAGTTTGCAGGAATGGGGAATGAAATGAGTAGCAGGGATGGGAACGATAAAGTCATCCATGTCCTCGTCCCCGCCCCCACCATGGACATCTCTATGCACGACCTATTTTTTTAATATTCGTCATCGTCAACAAGTTGACGTGAAATTCAACTATTTTCATAGGATAAACATTTAATTCTACTACATTTTGTTGTCAAGAAAATCTATAAAAAATTAATTTTTAGGTAGGTGGATATTATGGATTGATTTGATAACCTCTTAGCTATCTAAGGTCTTGTTAACCACTAGGTTTATTTATGATGTTTTCTTTATGTACTATGTATAAAGTAGAATTAGTTGTAAGTATTAGTAACATTTAGAGATGTACATGGGGCAAGGCCGGGTTGGGCTGGGGAATGACTTCCCCTCCTTGTCCCCACCACTTAATTTAATTCCCGTCCCTGAAAAAATTCCATTTTTTAAGGAATCGAGTGCTCGCGGGATTTTTTCAATTTTTTTTTACATTTTTTATTTATTATTTTGGACAATACTTTTTAAATAATTATATTTTCTTAAAAAATATTTATAAATTTCAACTATAATGTTAATTATTAAAGAAAAATACTCATATCCATAGATAATTTCATCAACAACTATATTTTTATTTGAAAATGAAAGGGGTAAAGTATAGAAAAGAAATATTAAAAAAAAAAAAAACCAAACGGGGCGGGATCGGGGAATTAGGGACGGGGAACCGGATTAGCCCACGGGAATTTCTCTAGTTACATCCTGTTTTATCTCTTGCTGTTAAGGAGCTTATAATTACTTAGTTAAGCATAAGTGTCTTTATCACCATGTGCAATTCCTTGAGAGGGTTCACATGCATTCGGGGAGGGTTCTAATACAGATATAGAAACACTCCATATATTATGAATTAAATTACAGAATATAGTTTGACAGATTATCAGTCTCAACTTCATGTTTGAAACCCGTTAACATAACTTGAATGTCGATGGTTAACAACTTGACATTAAGGTAATGTCCTTGGAAAGTGAAATTTTTTTTAGCATAAAAGGATGCTAAGAGCATTCAACCTTGATGTTTTTTCAAAACGTGATAAACTCGGCATTTTACATTCAAATGAGAGTGATATCAATGTGATTTTATCATATAGATATTGTCTACAATATGGTAAACTTTTATTCTCTGGTTTCTCTATGCATTATGCAGAAACAACTCCTTAAAAAGTTGTGGATTTTCTCTATTTTGCTCTTATCAGTGATGGTTTCAGGTATCGTGCAGTGACAAGTGCATATTATAGAGGTGCCGTGGGGGCAATGCTTGTCTACGACATGTCGAAGCGTCAGTCGTTTGATCATGTAGCTAGATGGTTAGAGGAAGTGCGTGGCCATGCAGACAAGAACATCGTTGTCATGCTTCTAGGAAACAAATCCGATCTAGGTTCTCTTCGTGTCGTGCCCATAGAGGAAGCAAAAGAGTTTGCTCAAACAGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGACCACAAATGTAGGGCCAGCGTTCGACACCATCCTGAAAGAAATTTACCGAGTAATTAGCAAGAATACGCTGGTTGCAAACGAGGAAGCTGATGTCGGAGGAAGCTCATCACTCCTAAAAGGAAAAACCATTGTTGTCCCTGGACAAGAAGAACCTCAGCCTGCAAGATCTTCTGGCTGTTGCAGTAGTTGACAAAGTAGAATTCTACTTTTGTTTCACTATATTTTCACATACATGAATTACTGCTTTTTACAGACTCTATACAAACACAGACCCCTTGGCCTCCAAAAGAGCACAAGAAGAAGAAAGGGAGAAGCAAATGATTGATA

mRNA sequence

TGAACCCTCAATTCAATTTGGTGTTCTTCCCAATCGCATCAAGCGATCGATTGTTCCTCCTCCGGATCGATCGCTTGGTGTCGGATTCGATTAGTATGTCCAATTTCAACCAGAAGATTGATTATGTGTTCAAGGTGGTGTTGATCGGAGACTCCGCGGTGGGGAAATCGCAGCTTCTGTCCCGTTTTGTTCGGAATGAGTTCAGTTTGGATTCCAAGGCCACGCTTGGGGTTGAGTTTCAGACCAAGACGCTTCTTATTGACAACAAGGCTATTAAGGCGCAGATATGGGATACTGCTGGACAGGAAAGGTATCGTGCAGTGACAAGTGCATATTATAGAGGTGCCGTGGGGGCAATGCTTGTCTACGACATGTCGAAGCGTCAGTCGTTTGATCATGTAGCTAGATGGTTAGAGGAAGTGCGTGGCCATGCAGACAAGAACATCGTTGTCATGCTTCTAGGAAACAAATCCGATCTAGGTTCTCTTCGTGTCGTGCCCATAGAGGAAGCAAAAGAGTTTGCTCAAACAGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGACCACAAATGTAGGGCCAGCGTTCGACACCATCCTGAAAGAAATTTACCGAGTAATTAGCAAGAATACGCTGGTTGCAAACGAGGAAGCTGATGTCGGAGGAAGCTCATCACTCCTAAAAGGAAAAACCATTGTTGTCCCTGGACAAGAAGAACCTCAGCCTGCAAGATCTTCTGGCTGTTGCAGTAGTTGACAAAGTAGAATTCTACTTTTGTTTCACTATATTTTCACATACATGAATTACTGCTTTTTACAGACTCTATACAAACACAGACCCCTTGGCCTCCAAAAGAGCACAAGAAGAAGAAAGGGAGAAGCAAATGATTGATA

Coding sequence (CDS)

ATGTCCAATTTCAACCAGAAGATTGATTATGTGTTCAAGGTGGTGTTGATCGGAGACTCCGCGGTGGGGAAATCGCAGCTTCTGTCCCGTTTTGTTCGGAATGAGTTCAGTTTGGATTCCAAGGCCACGCTTGGGGTTGAGTTTCAGACCAAGACGCTTCTTATTGACAACAAGGCTATTAAGGCGCAGATATGGGATACTGCTGGACAGGAAAGGTATCGTGCAGTGACAAGTGCATATTATAGAGGTGCCGTGGGGGCAATGCTTGTCTACGACATGTCGAAGCGTCAGTCGTTTGATCATGTAGCTAGATGGTTAGAGGAAGTGCGTGGCCATGCAGACAAGAACATCGTTGTCATGCTTCTAGGAAACAAATCCGATCTAGGTTCTCTTCGTGTCGTGCCCATAGAGGAAGCAAAAGAGTTTGCTCAAACAGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGACCACAAATGTAGGGCCAGCGTTCGACACCATCCTGAAAGAAATTTACCGAGTAATTAGCAAGAATACGCTGGTTGCAAACGAGGAAGCTGATGTCGGAGGAAGCTCATCACTCCTAAAAGGAAAAACCATTGTTGTCCCTGGACAAGAAGAACCTCAGCCTGCAAGATCTTCTGGCTGTTGCAGTAGTTGA

Protein sequence

MSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLLGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLVANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS

Homology

[Close]

BLAST of Sed0021422 vs. NCBI nr
Match: XP_008461787.1 (PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 6.3e-98
Identity = 191/219 (87.21%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQSFDH+ARWLEE+RGHADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENLFFMETSALE TNV  AF+TIL EIYRVISK  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           VAN+E D GGSSSLLKG  IVVPGQ EPQ A SSGCC S
Sbjct: 186 VANDETDSGGSSSLLKGTKIVVPGQ-EPQ-AASSGCCRS 222

[Close]

BLAST of Sed0021422 vs. NCBI nr
Match: XP_022998498.1 (ras-related protein RABA4c-like [Cucurbita maxima])

HSP 1 Score: 365.5 bits (937), Expect = 3.1e-97
Identity = 187/219 (85.39%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL+ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQ+FDH+ RWLEE+R HADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENLFFMETSALE TNV  AF+TIL EIYRVIS+  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           +ANEE D GGSSSLLKG  IVVPGQ EPQPA +SGCC S
Sbjct: 186 IANEETDSGGSSSLLKGTKIVVPGQ-EPQPA-TSGCCRS 222

[Close]

BLAST of Sed0021422 vs. NCBI nr
Match: XP_004149604.1 (ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical protein Csa_002054 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 1.6e-96
Identity = 188/219 (85.84%), Postives = 199/219 (90.87%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQ+FDH+ARWLEE+RGHADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENL FMETSALE TNV  AF+TIL EIYRVISK  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           +AN+E D GGSSSLLKG  IVVPGQ EPQ A SSGCC S
Sbjct: 186 IANDETDSGGSSSLLKGTKIVVPGQ-EPQ-AASSGCCRS 222

[Close]

BLAST of Sed0021422 vs. NCBI nr
Match: XP_023525670.1 (ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 186/219 (84.93%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL+ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQ+FDH+ARWLEE+R HADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEF+Q ENLFFMETSALE TNV  AF+TIL EIYRVIS+  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           +ANEE D GGSSSLLKG  IVVPGQ EPQ A +SGCC S
Sbjct: 186 IANEETDSGGSSSLLKGTKIVVPGQ-EPQSA-TSGCCRS 222

[Close]

BLAST of Sed0021422 vs. NCBI nr
Match: XP_022949337.1 (ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related protein RABA4c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036575.1 Ras-related protein RABA4c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 186/219 (84.93%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL+ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQ+FDH+ARWLEE+R HADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENLFFMETSALE TNV  AF+TIL EIYRVIS+  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           +ANEE D GG+SSLLKG  IVVPGQ EPQ A +SGCC S
Sbjct: 186 IANEETDSGGNSSLLKGTKIVVPGQ-EPQSA-TSGCCRS 222

[Close]

BLAST of Sed0021422 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 8.3e-93
Identity = 171/215 (79.53%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 6   QKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKAQIW 65
           QKIDYVFKVVLIGDSAVGKSQLL+RF RNEF+LDSKAT+GVEFQT+TL ID + +KAQIW
Sbjct: 13  QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72

Query: 66  DTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLLGNK 125
           DTAGQERYRAVTSAYYRGAVGAMLVYD++KRQSFDHVARWLEE+RGHADKNIV+ML+GNK
Sbjct: 73  DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132

Query: 126 SDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLVANE 185
           SDLG+LRVVP E+AKEFA+ ENLFFMETSALE+TNV  AF T+L EIYR++SK  LVANE
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192

Query: 186 EADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           E D  G+SSLLKG  IVVPGQ EP P   + CC S
Sbjct: 193 EVDSSGNSSLLKGTKIVVPGQ-EPAPPTKASCCMS 226

[Close]

BLAST of Sed0021422 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.1e-92
Identity = 168/219 (76.71%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF RNEFS++SKAT+GVEFQT+TL ID K IK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD++KRQSFDHVARWLEE+RGHADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNK+DLG+LR VP E+AKEFAQ ENLFFMETSAL++ NV P+F T+L EIYR++SK  L
Sbjct: 126 IGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           VANEE + GG SSLL+G  IVV G+E    ++  GCC +
Sbjct: 186 VANEEGESGGDSSLLQGTKIVVAGEE--TESKGKGCCGT 222

[Close]

BLAST of Sed0021422 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 8.6e-90
Identity = 164/216 (75.93%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 3   NFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKA 62
           ++NQKIDYVFKVVLIGDSAVGK+QLL+RF RNEFS+DSKAT+GVEFQTKTL+IDNK +KA
Sbjct: 7   DYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKA 66

Query: 63  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLL 122
           QIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQSFDH+A+WLEE+RGHADKNIV+ML+
Sbjct: 67  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLI 126

Query: 123 GNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLV 182
           GNK DLGSLR VP E+A+EFAQ ENLFFMETSALE TNV  AF TIL EIYR+ISK +L 
Sbjct: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLT 186

Query: 183 ANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCC 219
           A+++ D  G+SSLLKG  I++P ++E    +  GCC
Sbjct: 187 ADDD-DADGNSSLLKGTRIIIPSEQE--SGKRGGCC 219

[Close]

BLAST of Sed0021422 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 5.6e-81
Identity = 147/216 (68.06%), Postives = 181/216 (83.80%), Query Frame = 0


Query: 5   NQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKAQI 64
           N KIDYVFKVVLIGDSAVGKSQ+L+RF RNEFSLDSK+T+GVEFQT+TL+ID+K +KAQI
Sbjct: 11  NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70

Query: 65  WDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLLGN 124
           WDTAGQERYRAVTSAYYRGAVGAMLVYD++KRQ+FDH+ RWLEE+R HADKNIV++L+GN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 130

Query: 125 KSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLVAN 184
           K DL + R VP E+AKEFA+ E LFF+ETSALE TNV  AF T+L EIY +++K +L A+
Sbjct: 131 KCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAAD 190

Query: 185 EEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           E    G S+S L G+ I++PG  +  PA+ + CC +
Sbjct: 191 ESQGNGNSAS-LSGQKIIIPGPAQEIPAKRNMCCQA 225

[Close]

BLAST of Sed0021422 vs. ExPASy Swiss-Prot
Match: Q9FJN8 (Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79
Identity = 142/216 (65.74%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 5   NQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKAQI 64
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+ R+EFSLDSKAT+GVEFQT+TL+ID+K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 65  WDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLLGN 124
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQ+FDH+ RWLEE+R HADKNIV++L+GN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 125 KSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLVAN 184
           KSDL   R +P E+AKEFA+ E LFF+ETSA   TNV  AF T+L EI+ +++K +L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 185 EEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           E+ + G   SL   K  +VPG  +  P +S+ CC+S
Sbjct: 191 EDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Sed0021422 vs. ExPASy TrEMBL
Match: A0A1S3CFD0 (ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.1e-98
Identity = 191/219 (87.21%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQSFDH+ARWLEE+RGHADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENLFFMETSALE TNV  AF+TIL EIYRVISK  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           VAN+E D GGSSSLLKG  IVVPGQ EPQ A SSGCC S
Sbjct: 186 VANDETDSGGSSSLLKGTKIVVPGQ-EPQ-AASSGCCRS 222

[Close]

BLAST of Sed0021422 vs. ExPASy TrEMBL
Match: A0A6J1KGX4 (ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 187/219 (85.39%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL+ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQ+FDH+ RWLEE+R HADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENLFFMETSALE TNV  AF+TIL EIYRVIS+  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           +ANEE D GGSSSLLKG  IVVPGQ EPQPA +SGCC S
Sbjct: 186 IANEETDSGGSSSLLKGTKIVVPGQ-EPQPA-TSGCCRS 222

[Close]

BLAST of Sed0021422 vs. ExPASy TrEMBL
Match: A0A0A0LEW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.5e-97
Identity = 188/219 (85.84%), Postives = 199/219 (90.87%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQ+FDH+ARWLEE+RGHADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENL FMETSALE TNV  AF+TIL EIYRVISK  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           +AN+E D GGSSSLLKG  IVVPGQ EPQ A SSGCC S
Sbjct: 186 IANDETDSGGSSSLLKGTKIVVPGQ-EPQ-AASSGCCRS 222

[Close]

BLAST of Sed0021422 vs. ExPASy TrEMBL
Match: A0A6J1GBR1 (ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 9.8e-97
Identity = 186/219 (84.93%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKAT+GVEFQTKTL+ID KAIK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQ+FDH+ARWLEE+R HADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP E+AKEFAQ ENLFFMETSALE TNV  AF+TIL EIYRVIS+  L
Sbjct: 126 IGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           +ANEE D GG+SSLLKG  IVVPGQ EPQ A +SGCC S
Sbjct: 186 IANEETDSGGNSSLLKGTKIVVPGQ-EPQSA-TSGCCRS 222

[Close]

BLAST of Sed0021422 vs. ExPASy TrEMBL
Match: A0A6J1DGV8 (ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.9e-96
Identity = 182/219 (83.11%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF RNEFSLDSKAT+GVEFQTKTL+ID K IK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAML+YDM+KRQSFDH+ARWLEE+RGHADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEELRGHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNKSDLGSLRVVP ++A+EFAQ ENLFFMETSALE TNV  AF+TIL EIY+VIS+  L
Sbjct: 126 IGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKAL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           VANE+AD GG+SSLLKG  IVVPGQE  + A SSGCC S
Sbjct: 186 VANEDADSGGNSSLLKGTKIVVPGQE--RSAASSGCCRS 222

[Close]

BLAST of Sed0021422 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 339.3 bits (869), Expect = 2.2e-93
Identity = 168/219 (76.71%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 2   SNFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIK 61
           SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF RNEFS++SKAT+GVEFQT+TL ID K IK
Sbjct: 6   SNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIK 65

Query: 62  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVML 121
           AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD++KRQSFDHVARWLEE+RGHADKNIV+ML
Sbjct: 66  AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIML 125

Query: 122 LGNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTL 181
           +GNK+DLG+LR VP E+AKEFAQ ENLFFMETSAL++ NV P+F T+L EIYR++SK  L
Sbjct: 126 IGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNL 185

Query: 182 VANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           VANEE + GG SSLL+G  IVV G+E    ++  GCC +
Sbjct: 186 VANEEGESGGDSSLLQGTKIVVAGEE--TESKGKGCCGT 222

[Close]

BLAST of Sed0021422 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 331.3 bits (848), Expect = 6.1e-91
Identity = 164/216 (75.93%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 3   NFNQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKA 62
           ++NQKIDYVFKVVLIGDSAVGK+QLL+RF RNEFS+DSKAT+GVEFQTKTL+IDNK +KA
Sbjct: 7   DYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKA 66

Query: 63  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLL 122
           QIWDTAGQERYRAVTSAYYRGAVGAMLVYDM+KRQSFDH+A+WLEE+RGHADKNIV+ML+
Sbjct: 67  QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLI 126

Query: 123 GNKSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLV 182
           GNK DLGSLR VP E+A+EFAQ ENLFFMETSALE TNV  AF TIL EIYR+ISK +L 
Sbjct: 127 GNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLT 186

Query: 183 ANEEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCC 219
           A+++ D  G+SSLLKG  I++P ++E    +  GCC
Sbjct: 187 ADDD-DADGNSSLLKGTRIIIPSEQE--SGKRGGCC 219

[Close]

BLAST of Sed0021422 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 297.0 bits (759), Expect = 1.3e-80
Identity = 142/216 (65.74%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 5   NQKIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKAQI 64
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+ R+EFSLDSKAT+GVEFQT+TL+ID+K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 65  WDTAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLLGN 124
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+++RQ+FDH+ RWLEE+R HADKNIV++L+GN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 125 KSDLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLVAN 184
           KSDL   R +P E+AKEFA+ E LFF+ETSA   TNV  AF T+L EI+ +++K +L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 185 EEADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           E+ + G   SL   K  +VPG  +  P +S+ CC+S
Sbjct: 191 EDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Sed0021422 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 290.8 bits (743), Expect = 9.1e-79
Identity = 141/214 (65.89%), Postives = 178/214 (83.18%), Query Frame = 0


Query: 7   KIDYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKAQIWD 66
           K+DYVFKVVLIGDSAVGKSQLL+RF R+EFS+DSKAT+GVEFQT+TL I+ K+IKAQIWD
Sbjct: 13  KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

Query: 67  TAGQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLLGNKS 126
           TAGQERYRAVTSAYYRGAVGAMLVYDM+KR++F+H+ RWLEE+R HADKNIV++L+GNKS
Sbjct: 73  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132

Query: 127 DLGSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLVANEE 186
           DL   R VP E+AKEFA+ E LFF+ETSAL  TNV  +F+T++ +IY  ++K  L +  +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192

Query: 187 ADVGGSSSLLKGKTIVVPGQEEPQPARSSGCCSS 221
           ++  GS   L GK I++PG  +  PA++S CC+S
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTS 223

[Close]

BLAST of Sed0021422 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 258.1 bits (658), Expect = 6.6e-69
Identity = 125/211 (59.24%), Postives = 165/211 (78.20%), Query Frame = 0


Query: 9   DYVFKVVLIGDSAVGKSQLLSRFVRNEFSLDSKATLGVEFQTKTLLIDNKAIKAQIWDTA 68
           DY+FK+VLIGDS VGKS LLSRF RNEFS++SK+T+GVEF T+++ +D K IKAQ+WDTA
Sbjct: 11  DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70

Query: 69  GQERYRAVTSAYYRGAVGAMLVYDMSKRQSFDHVARWLEEVRGHADKNIVVMLLGNKSDL 128
           GQERYRA+TSAYYRGAVGA+LVYD+++  +F++V RWL+E+R H D N+V+ML+GNK+DL
Sbjct: 71  GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130

Query: 129 GSLRVVPIEEAKEFAQTENLFFMETSALETTNVGPAFDTILKEIYRVISKNTLVANEEAD 188
             LR VP EEA+ F++ EN+FFMETSAL+ TNV  AF  +L +IYRV+S+  L       
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKAL-----DG 190

Query: 189 VGGSSSLLKGKTIVVPGQEEPQPARSSGCCS 220
            G   SL KG+TI +  +++    +SSGCCS
Sbjct: 191 TGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of Sed0021422 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461787.1	6.3e-98	87.21	PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]	[more]
XP_022998498.1	3.1e-97	85.39	ras-related protein RABA4c-like [Cucurbita maxima]	[more]
XP_004149604.1	1.6e-96	85.84	ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical...	[more]
XP_023525670.1	2.0e-96	84.93	ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949337.1	2.0e-96	84.93	ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related p...	[more]

BLAST of Sed0021422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P25766	8.3e-93	79.53	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9FE79	3.1e-92	76.71	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
Q9LH50	8.6e-90	75.93	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q40191	5.6e-81	68.06	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q9FJN8	1.8e-79	65.74	Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1	[more]

BLAST of Sed0021422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFD0	3.1e-98	87.21	ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE...	[more]
A0A6J1KGX4	1.5e-97	85.39	ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4...	[more]
A0A0A0LEW7	7.5e-97	85.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1	[more]
A0A6J1GBR1	9.8e-97	84.93	ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE...	[more]
A0A6J1DGV8	4.9e-96	83.11	ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 P...	[more]

BLAST of Sed0021422 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47960.1	2.2e-93	76.71	RAB GTPase homolog A4C	[more]
AT3G12160.1	6.1e-91	75.93	RAB GTPase homolog A4D	[more]
AT5G65270.1	1.3e-80	65.74	RAB GTPase homolog A4A	[more]
AT4G39990.1	9.1e-79	65.89	RAB GTPase homolog A4B	[more]
AT4G18430.1	6.6e-69	59.24	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 12..33 score: 52.45 coord: 115..128 score: 48.97 coord: 150..172 score: 40.86 coord: 35..51 score: 30.72 coord: 53..75 score: 52.16
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 12..175 e-value: 7.4E-100 score: 347.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 17..211 e-value: 2.7E-4 score: 12.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 9..175 e-value: 1.9E-22 score: 90.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..220
None	No IPR available	PANTHER	PTHR47978:SF13	RAS-RELATED PROTEIN RABA4C	coord: 2..219
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 2..219
None	No IPR available	PROSITE	PS51419	RAB	coord: 7..218 score: 33.946884
None	No IPR available	PROSITE	PS51420	RHO	coord: 5..183 score: 9.253969
None	No IPR available	CDD	cd01868	Rab11_like	coord: 9..173 e-value: 3.68663E-118 score: 331.447
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 14..171 e-value: 1.6E-9 score: 3.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 13..173 e-value: 2.9E-58 score: 196.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..220 score: 15.626462
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..169 e-value: 3.5E-32 score: 109.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..218 e-value: 9.4E-67 score: 226.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021422.1	Sed0021422.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding