Sed0021381 (gene) Chayote v1

Overview


Name	Sed0021381
Type	gene
Organism	Sechium edule (Chayote v1)
Description	REF/SRPP-like protein At3g05500
Location	LG04: 3480734 .. 3483004 (+)
RNA-Seq Expression	Sed0021381
Synteny	Sed0021381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATATCTTACGTGTCCCGCGTTTTTCTCAGCTATAAATCCCCTTTCTTCTCCTCTTCCCCTTCCATCGATCCCATCGCCAAATCACTCATCAGATCCCATCTCTGAATTTCTTCATGGCCGATTCCGATTCCGATTCTTCTTCGCAGCAACATGAAATGGTACGATTCTCTACGCTACTCGAATTTCTCAGGATCCGATTCGATTTATGCTGTTTTCTAATTCGCAAGGTGTGTTTGAGCCACGTTTATGTAAACGATCGAGATGGTTATAATAACTCAACCGATGTTTGTTCTATTATTGTTACTTAAACTTGTATATCCATTTATCTAAATCACTCATCACGGGTATCAAAAAGAAGTTTAGGGAGTAATATATATATATAGCCGCTTAAATACAATTTATTATAATTTCTGTTATAATAACTTGTCTTTCAAATATCATTTATAATAATGCATTTATTTGAACTCACCATCTATCATAATCTTTCGTCTCTTTTAACCAAACTGGTGCTCCAAATATCCCTATAGTGTTTTTGACCTAATTGCATTTGTGGATTTTGTGCGATGATGAAATTGATTGATTGATTTGGTTTGGTGTGTAGGCGGGTAGGGCAGAGGAAGAAGAGAGGCTGAAGTATTTGGAGTTCGTCCAAACGGCGGCGGTTCGAGCGACGGAGTGTTTCTTCGATGCTTATGGCTATGCGAAGGGCCGGTCCGGTCCGCTTAAGCCCGGCGTCGAGACGGTAGAGGGGACTGTGAAGTCCGTCGTCGCTCCTCTCTACATCAAGTTCCATGGCGTTCCGATTGAGCTTCTTAAGTTCGTCGATCGCAAGGTTTGTTTGCTTTCTTCTCTTCATATGTTTTTGATCTTCAAATTCATTTATTTTGGATTTCTGCTTGGGTTGATTTCCCATATCGTTCTTGTTAATTAGTATTCAATTATGTTAAGTCAAGCATAAACCTAAAAACTTAAGTTTCTTTGATAACAATTTTGTTTTCTGTTTTCTGTTTTTCTTTTTTCATTTTTAGTTTTTTATTTTAAAAATTAAAAAAAAAAGTATATGTTTGATTACTAATTGTAATTTTATGTTTTTTATTTTTTATTTTTTAAAATTTAAGCCTACAACAACTATCTTACCATATATTTTTTCTTATTTAGATATCTACCTCTCATCTATATTGGTAGAAATCAAACCAAAATTTAGAAATAAAAAAAATAACTTCCAAAAGTTTATTTTTATTTTTAAAAATTGGTTAGTATTTACCTACTTTCTTTAAGGAAAGATAGACAAACGTTAGTAATGGTGGAACACATAGTAGGAAATTTGAGTGAAAATAGATTTAAATTTAAAAAAACTAGTGGTTATCAAACTGGGCTTTATTGAATTGAGTTTGAGTTTGAGATTTAGAAGAAAAAGGTTTTCGTAGAGTTAGTGAAAGCAGTGTGTTTTATACTTTGAAATGATTCCAAAATACCAAAAACGATGGAGAAATTTTACATAACATGTACTCATATTGCCAGATTTTAAATGTGCAGGTTGATGAGTCTGTGACCAAGATTGACCGCCATGTACCTCCAACAGTCAAGCAAGCATCATCGCTTGCCATGTCCGCTGCACAGCAAGCGCCCGAACTCGCCCGAAATGCAGCCTACAAGGTTCAACGCACTGGTCTCAAAGACTCTGTCTCCGAAGTTGTGAAATCTGTTTATGCCAAGTACGAGCCAACAGCGAAGCAACTCTACTCCAAATACGAGCCAAAGGCCGAGCAATGTGCAGCTTCAGGATGGCACAAGCTCAACCAGCTCCCTGTCTTCCCCATCGTGGCACATGCCATCTTGCCAATTGCCGCTTACTGTACCGAGAAGTACAACGAAACTGTGCAAACCACCGCGAAGAAGGGCTACAAGGTCTCTTCGTATCTTCCATTGGTTCCTACTGAGAGGATTGTCAAAGTGTTCAGCAAGGATAGGGTTGAGATACAGCCCTTGGTGAATTGAGGGAGCCTTTGGTTTTATACGATGTTTCTTATAGATATATATGTAAGAAATAACACATTACATTAAGGTTTAAAAGAAAATACATTACATTACATTACAGATGTTTTTGTTGGAGGGGGATGATTCACTTATGGAGCTATCACTTTTTTTCCTATCATTTCTCGTGTTGTATGAATAGATATTATTGTGGAAGTGGAAGGAAAAATCGAAAACTTGGGAAGAAAAAAAATTGTATATTGTTGGAGTGGTAGGAAAAGTCGAAAACTTGGGA

mRNA sequence

CAATATCTTACGTGTCCCGCGTTTTTCTCAGCTATAAATCCCCTTTCTTCTCCTCTTCCCCTTCCATCGATCCCATCGCCAAATCACTCATCAGATCCCATCTCTGAATTTCTTCATGGCCGATTCCGATTCCGATTCTTCTTCGCAGCAACATGAAATGGCGGGTAGGGCAGAGGAAGAAGAGAGGCTGAAGTATTTGGAGTTCGTCCAAACGGCGGCGGTTCGAGCGACGGAGTGTTTCTTCGATGCTTATGGCTATGCGAAGGGCCGGTCCGGTCCGCTTAAGCCCGGCGTCGAGACGGTAGAGGGGACTGTGAAGTCCGTCGTCGCTCCTCTCTACATCAAGTTCCATGGCGTTCCGATTGAGCTTCTTAAGTTCGTCGATCGCAAGGTTGATGAGTCTGTGACCAAGATTGACCGCCATGTACCTCCAACAGTCAAGCAAGCATCATCGCTTGCCATGTCCGCTGCACAGCAAGCGCCCGAACTCGCCCGAAATGCAGCCTACAAGGTTCAACGCACTGGTCTCAAAGACTCTGTCTCCGAAGTTGTGAAATCTGTTTATGCCAAGTACGAGCCAACAGCGAAGCAACTCTACTCCAAATACGAGCCAAAGGCCGAGCAATGTGCAGCTTCAGGATGGCACAAGCTCAACCAGCTCCCTGTCTTCCCCATCGTGGCACATGCCATCTTGCCAATTGCCGCTTACTGTACCGAGAAGTACAACGAAACTGTGCAAACCACCGCGAAGAAGGGCTACAAGGTCTCTTCGTATCTTCCATTGGTTCCTACTGAGAGGATTGTCAAAGTGTTCAGCAAGGATAGGGTTGAGATACAGCCCTTGGTGAATTGAGGGAGCCTTTGGTTTTATACGATGTTTCTTATAGATATATATGTAAGAAATAACACATTACATTAAGGTTTAAAAGAAAATACATTACATTACATTACAGATGTTTTTGTTGGAGGGGGATGATTCACTTATGGAGCTATCACTTTTTTTCCTATCATTTCTCGTGTTGTATGAATAGATATTATTGTGGAAGTGGAAGGAAAAATCGAAAACTTGGGAAGAAAAAAAATTGTATATTGTTGGAGTGGTAGGAAAAGTCGAAAACTTGGGA

Coding sequence (CDS)

ATGGCCGATTCCGATTCCGATTCTTCTTCGCAGCAACATGAAATGGCGGGTAGGGCAGAGGAAGAAGAGAGGCTGAAGTATTTGGAGTTCGTCCAAACGGCGGCGGTTCGAGCGACGGAGTGTTTCTTCGATGCTTATGGCTATGCGAAGGGCCGGTCCGGTCCGCTTAAGCCCGGCGTCGAGACGGTAGAGGGGACTGTGAAGTCCGTCGTCGCTCCTCTCTACATCAAGTTCCATGGCGTTCCGATTGAGCTTCTTAAGTTCGTCGATCGCAAGGTTGATGAGTCTGTGACCAAGATTGACCGCCATGTACCTCCAACAGTCAAGCAAGCATCATCGCTTGCCATGTCCGCTGCACAGCAAGCGCCCGAACTCGCCCGAAATGCAGCCTACAAGGTTCAACGCACTGGTCTCAAAGACTCTGTCTCCGAAGTTGTGAAATCTGTTTATGCCAAGTACGAGCCAACAGCGAAGCAACTCTACTCCAAATACGAGCCAAAGGCCGAGCAATGTGCAGCTTCAGGATGGCACAAGCTCAACCAGCTCCCTGTCTTCCCCATCGTGGCACATGCCATCTTGCCAATTGCCGCTTACTGTACCGAGAAGTACAACGAAACTGTGCAAACCACCGCGAAGAAGGGCTACAAGGTCTCTTCGTATCTTCCATTGGTTCCTACTGAGAGGATTGTCAAAGTGTTCAGCAAGGATAGGGTTGAGATACAGCCCTTGGTGAATTGA

Protein sequence

MADSDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETVEGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAPELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLPVFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPLVN

Homology

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BLAST of Sed0021381 vs. NCBI nr
Match: XP_022969922.1 (REF/SRPP-like protein At3g05500 [Cucurbita maxima])

HSP 1 Score: 402.1 bits (1032), Expect = 3.4e-108
Identity = 205/242 (84.71%), Postives = 222/242 (91.74%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DS+ SSQ HEMA RA EEERLKYLEFVQTAA RA+ECFF+AYGYAK R GPL+PGVETV
Sbjct: 2   ADSNPSSQHHEMAARA-EEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PLY KFHGVPIE+LKFVDRKVDESVTKIDRHVPPT+KQASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+ TGLKDSVS +VKSVYAKYEPTAKQLYSKYEPKAEQCAAS WH+LNQLP
Sbjct: 122 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP A YCTEKYNETVQ+T+KKGYKVSSYLPLVPTERI KVFSKDR+E++PL
Sbjct: 182 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

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BLAST of Sed0021381 vs. NCBI nr
Match: KAG6588484.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022313.1 REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 3.4e-108
Identity = 205/242 (84.71%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DS+ SSQ HEMA RA EEERLKYLEFVQTAA RATECFF+ YGYAK R GPL+PGVETV
Sbjct: 2   ADSNPSSQHHEMAARA-EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PLY KFHGVPIE+LKFVDRKVDESVTKIDRHVPPT+KQASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+ TGLKDSVS +VKSVYAKYEPTAKQLYSKYEPKAEQCAAS WH+LNQLP
Sbjct: 122 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP A YCTEKYNETVQ+T+KKGYKVSSYLPLVPTERI KVFSKDR+E++PL
Sbjct: 182 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

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BLAST of Sed0021381 vs. NCBI nr
Match: XP_022933698.1 (REF/SRPP-like protein At3g05500 [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 1.7e-107
Identity = 204/242 (84.30%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DS+ SSQ HEMA RA EEERLKYLEFVQTAA RATECFF+ YGYAK R GPL+PGVETV
Sbjct: 2   ADSNPSSQHHEMAARA-EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PLY KFHGVPIE+LKFVDRKVD SVTKIDRHVPPT+KQASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+ TGLKDSVS +VKSVYAKYEPTAKQLYSKYEPKAEQCAAS WH+LNQLP
Sbjct: 122 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP A YCTEKYNETVQ+T+KKGYKVSSYLPLVPTERI KVFSKDR+E++PL
Sbjct: 182 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

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BLAST of Sed0021381 vs. NCBI nr
Match: XP_023530281.1 (REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107
Identity = 204/242 (84.30%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DS+ SSQ  EMA RA EEERLKYLEFVQTAA RATECFF+ YGYAK R GPL+PGVETV
Sbjct: 2   ADSNPSSQHQEMAARA-EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PLY KFHGVPIE+LKFVDRKVDESVTKIDRHVPPT+KQASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+ TGLKDSVS +VKSVYAKYEPTAKQLYSKYEPKAEQCAAS WH+LNQLP
Sbjct: 122 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP A YCTEKYNETVQ+T+KKGYKVSSYLPLVPTERI KVFSKDR+E++PL
Sbjct: 182 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

[Close]

BLAST of Sed0021381 vs. NCBI nr
Match: XP_008450634.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 7.7e-105
Identity = 203/242 (83.88%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DSD SSQ+ +MA RA +E+RLKYLEFVQTAA RATECFF+ YGYAK RSGPLKPGVETV
Sbjct: 2   ADSDHSSQRQDMAVRA-DEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PL  KFHGVPIE+LKFVDRKVDESVTKIDRHVPPTVK ASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+R+GLKDSVS +VKSVYAKYEP+AKQLYSKYEPKAEQCAAS WHKLNQLP
Sbjct: 122 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP AAYCTEKYNETV+T+AKKGYKVSSYLPLVPTERI KVFSK+ VE++PL
Sbjct: 182 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

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BLAST of Sed0021381 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.2e-73
Identity = 136/224 (60.71%), Postives = 178/224 (79.46%), Query Frame = 0


Query: 20  EEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETVEGTVKSVVAPLYIKFH 79
           EE+ERLKYL+FVQ AAV A   F   Y  AK +SGPLKPGVE+VEG VK+VV P+Y K+H
Sbjct: 17  EEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYH 76

Query: 80  GVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAPELARNAAYKVQRTGLK 139
            VP+E+LK++D+KVD SVT++DR VPP VKQ S+ A+SAAQ AP +AR  A +V+R G+ 
Sbjct: 77  DVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVV 136

Query: 140 DSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLPVFPIVAHAILPIAAYC 199
           ++ S + KSVY+KYEP AK+LY+ YEPKAEQCA S W KLNQLP+FP +A   +P AA+C
Sbjct: 137 ETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFC 196

Query: 200 TEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 244
           +EKYN+TV   A+KGY+V+SY+PLVPTERI K+F++++ E +PL
Sbjct: 197 SEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of Sed0021381 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.6e-66
Identity = 130/230 (56.52%), Postives = 170/230 (73.91%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           ++S++  Q   + G   EE+RLKYL+FVQ AA+    CF   Y YAK  SGPLKPGV+TV
Sbjct: 2   AESEAKQQPETVHG---EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVK+V+ P+Y KF+ VP ELL FVDRKV+ S+ +++RHVP  VK+AS  A++ AQ+AP
Sbjct: 62  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           ELA   A +VQR G+ D+   + K+VY+K EPTAK+L SKYEP AEQ A S W  LN+LP
Sbjct: 122 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVF 234
           +FP VA  ++P AAY +EKYN++V  TA++GY V+ YLPL+PTERI KVF
Sbjct: 182 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

[Close]

BLAST of Sed0021381 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.5e-53
Identity = 121/243 (49.79%), Postives = 160/243 (65.84%), Query Frame = 0


Query: 1   MADSDSD---SSSQQHEMA-------GRAEEEERLKYLEFVQTAAVRATECFFDAYGYAK 60
           MADS SD   S+  + E+          A EEERL+YLEFVQ AA +       AY YAK
Sbjct: 1   MADSGSDAPISNRPEEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAK 60

Query: 61  GRSGPLKPGVETVEGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQ 120
             +GPL+PGV+ VEGTVK+VV P+Y +FHGVP++LLKF+DRKV ESV ++DR VPP VK 
Sbjct: 61  QGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK- 120

Query: 121 ASSLAMSAAQQAPELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQ 180
                     +AP LAR+AA +V++ GL  + + + KS  A+ EP A+ LY++YEP AE+
Sbjct: 121 ----------EAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAER 180

Query: 181 CAASGWHKLNQLPVFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIV 234
            AA  W  LN+LP+ P V  A+LP AA  + +YN  V   AK+G  V++YLPLVPTER+ 
Sbjct: 181 KAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLS 232

[Close]

BLAST of Sed0021381 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 5.5e-53
Identity = 121/243 (49.79%), Postives = 160/243 (65.84%), Query Frame = 0


Query: 1   MADSDSD---SSSQQHEMA-------GRAEEEERLKYLEFVQTAAVRATECFFDAYGYAK 60
           MADS SD   S+  + E+          A EEERL+YLEFVQ AA +       AY YAK
Sbjct: 1   MADSGSDAPISNRPEEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAK 60

Query: 61  GRSGPLKPGVETVEGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQ 120
             +GPL+PGV+ VEGTVK+VV P+Y +FHGVP++LLKF+DRKV ESV ++DR VPP VK 
Sbjct: 61  QGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK- 120

Query: 121 ASSLAMSAAQQAPELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQ 180
                     +AP LAR+AA +V++ GL  + + + KS  A+ EP A+ LY++YEP AE+
Sbjct: 121 ----------EAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAER 180

Query: 181 CAASGWHKLNQLPVFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIV 234
            AA  W  LN+LP+ P V  A+LP AA  + +YN  V   AK+G  V++YLPLVPTER+ 
Sbjct: 181 KAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLS 232

[Close]

BLAST of Sed0021381 vs. ExPASy Swiss-Prot
Match: Q41112 (Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-49
Identity = 106/189 (56.08%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 46  YGYAKGRSGPLKPGVETVEGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVP 105
           Y YAK R+GPLKPGV TVE  VK+VVAP+Y +FH VP+ELLK+ DRKV E    +DRHVP
Sbjct: 7   YSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVP 66

Query: 106 PTVKQASSLAMSAAQQAPELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYE 165
             VK+ SS A S   +                 +D VS   K+VY+KYEPT         
Sbjct: 67  SNVKKVSSQARSVVSEV---------------RRDGVSTFAKTVYSKYEPT--------- 126

Query: 166 PKAEQCAASGWHKLNQLPVFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVP 225
             AEQCA S W KLNQLP+FP VA+A+LP AAYCTEKYNE + ++A+KGY+VS+YLPLVP
Sbjct: 127 --AEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVP 165

Query: 226 TERIVKVFS 235
           TE+I KVFS
Sbjct: 187 TEKIAKVFS 165

[Close]

BLAST of Sed0021381 vs. ExPASy TrEMBL
Match: A0A6J1HXN7 (REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 205/242 (84.71%), Postives = 222/242 (91.74%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DS+ SSQ HEMA RA EEERLKYLEFVQTAA RA+ECFF+AYGYAK R GPL+PGVETV
Sbjct: 2   ADSNPSSQHHEMAARA-EEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PLY KFHGVPIE+LKFVDRKVDESVTKIDRHVPPT+KQASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+ TGLKDSVS +VKSVYAKYEPTAKQLYSKYEPKAEQCAAS WH+LNQLP
Sbjct: 122 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP A YCTEKYNETVQ+T+KKGYKVSSYLPLVPTERI KVFSKDR+E++PL
Sbjct: 182 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

[Close]

BLAST of Sed0021381 vs. ExPASy TrEMBL
Match: A0A6J1F5J8 (REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 8.1e-108
Identity = 204/242 (84.30%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DS+ SSQ HEMA RA EEERLKYLEFVQTAA RATECFF+ YGYAK R GPL+PGVETV
Sbjct: 2   ADSNPSSQHHEMAARA-EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PLY KFHGVPIE+LKFVDRKVD SVTKIDRHVPPT+KQASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+ TGLKDSVS +VKSVYAKYEPTAKQLYSKYEPKAEQCAAS WH+LNQLP
Sbjct: 122 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP A YCTEKYNETVQ+T+KKGYKVSSYLPLVPTERI KVFSKDR+E++PL
Sbjct: 182 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

[Close]

BLAST of Sed0021381 vs. ExPASy TrEMBL
Match: A0A1S3BP12 (REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.8e-105
Identity = 203/242 (83.88%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DSD SSQ+ +MA RA +E+RLKYLEFVQTAA RATECFF+ YGYAK RSGPLKPGVETV
Sbjct: 2   ADSDHSSQRQDMAVRA-DEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVV PL  KFHGVPIE+LKFVDRKVDESVTKIDRHVPPTVK ASS AMSAAQQAP
Sbjct: 62  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+ARN A +V+R+GLKDSVS +VKSVYAKYEP+AKQLYSKYEPKAEQCAAS WHKLNQLP
Sbjct: 122 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP AAYCTEKYNETV+T+AKKGYKVSSYLPLVPTERI KVFSK+ VE++PL
Sbjct: 182 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

[Close]

BLAST of Sed0021381 vs. ExPASy TrEMBL
Match: A0A0A0M1J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 201/242 (83.06%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 4   SDSDSSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETV 63
           +DSD SSQ+ +M  RA++   LKYLEFVQTAA RATECFF+ YGYAK RSGPLKPGVETV
Sbjct: 2   ADSDLSSQRQDMPVRADQGS-LKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 61

Query: 64  EGTVKSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAP 123
           EGTVKSVVAPLY KFHGVPIE+LKFVDRKVDESVTKIDRHVPPTVKQASS AM AAQQAP
Sbjct: 62  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 121

Query: 124 ELARNAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLP 183
           E+AR+ A +V+R GLKDSVS +VKSVYAKYEP+AKQLYSKYEPKAEQCAAS WHKLNQLP
Sbjct: 122 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 181

Query: 184 VFPIVAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 243
           VFP VA AILP AAYCTEKYNETV+T+AKKGYKVSSYLPLVPTERI KVFSK+ VE++PL
Sbjct: 182 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 241

Query: 244 VN 246
           VN
Sbjct: 242 VN 242

[Close]

BLAST of Sed0021381 vs. ExPASy TrEMBL
Match: A0A5D3CFW4 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003980 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.7e-102
Identity = 197/231 (85.28%), Postives = 212/231 (91.77%), Query Frame = 0


Query: 15  MAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETVEGTVKSVVAPL 74
           MA RA +E+RLKYLEFVQTAA RATECFF+ YGYAK RSGPLKPGVETVEGTVKSVV PL
Sbjct: 1   MAVRA-DEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPL 60

Query: 75  YIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAPELARNAAYKVQ 134
             KFHGVPIE+LKFVDRKVDESVTKIDRHVPPTVK ASS AMSAAQQAPE+ARN A +V+
Sbjct: 61  CNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAPEVARNVASEVR 120

Query: 135 RTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLPVFPIVAHAILP 194
           R+GLKDSVS +VKSVYAKYEP+AKQLYSKYEPKAEQCAAS WHKLNQLPVFP VA AILP
Sbjct: 121 RSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILP 180

Query: 195 IAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPLVN 246
            AAYCTEKYNETV+T+AKKGYKVSSYLPLVPTERI KVFSK+ VE++PLVN
Sbjct: 181 TAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPLVN 230

[Close]

BLAST of Sed0021381 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 275.4 bits (703), Expect = 4.4e-74
Identity = 136/224 (60.71%), Postives = 178/224 (79.46%), Query Frame = 0


Query: 20  EEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETVEGTVKSVVAPLYIKFH 79
           EE+ERLKYL+FVQ AAV A   F   Y  AK +SGPLKPGVE+VEG VK+VV P+Y K+H
Sbjct: 17  EEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYH 76

Query: 80  GVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAPELARNAAYKVQRTGLK 139
            VP+E+LK++D+KVD SVT++DR VPP VKQ S+ A+SAAQ AP +AR  A +V+R G+ 
Sbjct: 77  DVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVV 136

Query: 140 DSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLPVFPIVAHAILPIAAYC 199
           ++ S + KSVY+KYEP AK+LY+ YEPKAEQCA S W KLNQLP+FP +A   +P AA+C
Sbjct: 137 ETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFC 196

Query: 200 TEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDRVEIQPL 244
           +EKYN+TV   A+KGY+V+SY+PLVPTERI K+F++++ E +PL
Sbjct: 197 SEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of Sed0021381 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-44
Identity = 99/230 (43.04%), Postives = 137/230 (59.57%), Query Frame = 0


Query: 8   SSSQQHEMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETVEGTV 67
           SSS    +    ++E +LK+LEF+Q AAV    CF   Y  AK  +GPLK GVE +E  V
Sbjct: 24  SSSSSPSLVVEDDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCV 83

Query: 68  KSVVAPLYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAPELAR 127
           ++V+APLY KFH VP +LL FVDRKVD+    ++ +VP  VKQASS A++ A +      
Sbjct: 84  RTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATE------ 143

Query: 128 NAAYKVQRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLPVFPI 187
                VQRTG+ D+   + +SV             KYEP AE  AA+ W  LNQLP+FP 
Sbjct: 144 -----VQRTGVVDTTKSIARSV-----------RDKYEPAAEYYAATLWRLLNQLPLFPE 203

Query: 188 VAHAILPIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKDR 238
           VAH ++P A Y +EKYN+ V+    + Y  + YLP++P E+I  +  +D+
Sbjct: 204 VAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQDQ 231

[Close]

BLAST of Sed0021381 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26
Identity = 78/223 (34.98%), Postives = 106/223 (47.53%), Query Frame = 0


Query: 14  EMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETVEGTVKSVVAP 73
           E   +  +E  LK+L FV+ A +       + Y YAK  SGPLK  VE VEG V +VV P
Sbjct: 2   ETEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTP 61

Query: 74  LYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAPELARNAAYKV 133
           +Y KF  VP  LL F+D KV E   K D H PP  K+  + A     +A E A++   K 
Sbjct: 62  VYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFV-KE 121

Query: 134 QRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLPVFPIVAHAIL 193
            RTG   +      + Y  +  T               +   W KLNQ      +    L
Sbjct: 122 ARTGGPKAAFNYAATEYKFFVVTN--------------SVKVWAKLNQYKPIHAMGDKAL 181

Query: 194 PIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKD 237
           P+AA+ + +YN+ V      GY +  YLPLVP + IVK + K+
Sbjct: 182 PVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

[Close]

BLAST of Sed0021381 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26
Identity = 78/223 (34.98%), Postives = 106/223 (47.53%), Query Frame = 0


Query: 14  EMAGRAEEEERLKYLEFVQTAAVRATECFFDAYGYAKGRSGPLKPGVETVEGTVKSVVAP 73
           E   +  +E  LK+L FV+ A +       + Y YAK  SGPLK  VE VEG V +VV P
Sbjct: 2   ETEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTP 61

Query: 74  LYIKFHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSLAMSAAQQAPELARNAAYKV 133
           +Y KF  VP  LL F+D KV E   K D H PP  K+  + A     +A E A++   K 
Sbjct: 62  VYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFV-KE 121

Query: 134 QRTGLKDSVSEVVKSVYAKYEPTAKQLYSKYEPKAEQCAASGWHKLNQLPVFPIVAHAIL 193
            RTG   +      + Y  +  T               +   W KLNQ      +    L
Sbjct: 122 ARTGGPKAAFNYAATEYKFFVVTN--------------SVKVWAKLNQYKPIHAMGDKAL 181

Query: 194 PIAAYCTEKYNETVQTTAKKGYKVSSYLPLVPTERIVKVFSKD 237
           P+AA+ + +YN+ V      GY +  YLPLVP + IVK + K+
Sbjct: 182 PVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

The following BLAST results are available for this feature:

BLAST of Sed0021381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969922.1	3.4e-108	84.71	REF/SRPP-like protein At3g05500 [Cucurbita maxima]	[more]
KAG6588484.1	3.4e-108	84.71	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG70223...	[more]
XP_022933698.1	1.7e-107	84.30	REF/SRPP-like protein At3g05500 [Cucurbita moschata]	[more]
XP_023530281.1	2.8e-107	84.30	REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo]	[more]
XP_008450634.1	7.7e-105	83.88	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo]	[more]

BLAST of Sed0021381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA63	6.2e-73	60.71	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
Q9SW70	5.6e-66	56.52	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
A2Y0H2	5.5e-53	49.79	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]
Q9FRA7	5.5e-53	49.79	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]
Q41112	2.8e-49	56.08	Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1	[more]

BLAST of Sed0021381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXN7	1.6e-108	84.71	REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3...	[more]
A0A6J1F5J8	8.1e-108	84.30	REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE...	[more]
A0A1S3BP12	3.8e-105	83.88	REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=...	[more]
A0A0A0M1J0	1.2e-103	83.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1	[more]
A0A5D3CFW4	1.7e-102	85.28	REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]

BLAST of Sed0021381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05500.1	4.4e-74	60.71	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	2.8e-44	43.04	Rubber elongation factor protein (REF)	[more]
AT1G67360.2	2.6e-26	34.98	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	2.6e-26	34.98	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 20..234 e-value: 2.7E-84 score: 282.1
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 13..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33732:SF9	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 13..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021381.1	Sed0021381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0019915	lipid storage
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet
molecular_function	GO:0003746	translation elongation factor activity